Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009677

Physical Location & Seq

Genomic Coordinates Forward (+)

11192491 .. 11197144

Gene Structure 4654 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ36791

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1407 bp

ATGGCCACTCCCTTCACCATTCCCGTCACTGCTGCTCAGGTTGGGACTTACTTTGTGGGGCAGTACTATCAAGTGCTTCAGCAGCAGCCAGACTATGTGCACCAATTCTACTCTGAATCCAGCACTATGCTTCGCATTGATGGCAACACCAGGGACACCGCCTCTGGAATGCTGCAAATCCATACAGTTGTTATGTCACTCGGGTATTCTGGAGTTGAAATCAAGACAGCGCATTCTTTGGAATCTTGGAATGGAGGTGTTCTTGTGATGGTTTCTGGCTCTGTGCATTTGAAAAATTTTGGGGGGAGGAGGAACTTTGTTCAGACTTTTTTCCTTGCACCTCAGGAGAAAGGTTATTTTGTACTTAATGATATATTTCACTTCATTGATGAGGATCAAGTTCATCAGCATCCAGCAGTCTTATTAGCCCATAGCACTCTTGACTCCAAACTGAGTGCCCCTACTACAATTCCTGAGCCAGTGGCTAATTATATGATGAGTGGAGAAACTCATACCAGAGACTATGTGGTGCCTGATGTCAATGGAAATGGTCCAGTTGACAACTATGGCTATGCAGAGCAACGGTTGCAGCAGGTTGTTGAATCTGAGAATATCATGGAGGATCCTGCTGCAGAATTGTCGAACGGTTCATTTCAAAGTGCAGTGAATGTTGTACAAGAACAGCTGCCTGCATCTGTTGAGGAACCTATTGGAGAGCCCCAGAAGCAGACCTATGCCTCTATATTACGCGTTGCTAAAGGACAACCTGCACCATCTGTAGCTCCTCAGCCTTCAGTTAACAAGAGTGCACCACCGGCTTCAGATTGGAATGACTTTTCACAGCCCATTGCATCGTCCAATGCAGTTGAAAGGCCTGTAGCAGAGACAGCAGATGAAGTTTCTGCCCTAGAAGATGAAGATGAAATCAAGTCCGTCTATGTACGAAACTTGCCACCTAACGTGGACCCATCTGAAGTTGAGGAGGAATTTGTTAATTTTGGAAAACTCAAGCAGCCTGAAGGAGTGGTCATTAGGAGTCGCAAGGATGTTGGTGTTTGCTATGCATTTGTTGAATTCGAAGACATGTCTGGTGTTCGTAATGCTGTCAAGGCCGGTAGTGTTCAGATTGCTGGGCGACAAGTATACATTGAAGAGCGGAGACCAAACAGTCACATTCCCTCTCGAATGGGAAGAGGAAGGGGTAGAGGAAGGGGCAGCTACCAATCAGAGGTGCCAAGAGGTCGTTTTGTCTCTCGGAATTTTGGGAGGAGTGGAAGCTACGATGGAGGTGACCAGGACTACGGCAGACCAAGAGGAAATGGATTCTATCGTCCAAGTGGCCGACAAGACAGGGCAAACCCAAGCTACCAATCGTCAAGAAACGGGCAATATTCATCTGAGTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006508 GO:0006807 GO:0006914 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0010494 GO:0016236 GO:0016579 GO:0019538 GO:0032386 GO:0032879 GO:0032991 GO:0034517 GO:0035770 GO:0035973 GO:0036211 GO:0036464 GO:0043021 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044877 GO:0050789 GO:0050794 GO:0051049 GO:0060341 GO:0060627 GO:0060628 GO:0061912 GO:0061919 GO:0065007 GO:0070646 GO:0070647 GO:0071704 GO:0097159 GO:1901363 GO:1901564 GO:1905538 GO:1990861 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NTF2 RRM_1

Protein Analysis

468

Amino Acids

51.65

Weight (kDa)

5.27

Isoelectric Point (pI)

57.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NTF2	PF02136	14 - 128	2.5e-27	Nuclear transport factor 2 (NTF2) domain
RRM_1	PF00076	312 - 376	1.2e-07	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009677)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g04660 FvH4_4g04660
malus_domestica	MD13G1221800.v1.1 MD16G1226700.v1.1
prunus_persica	Prupe.1G048900_v2.0.a1 Prupe.1G048900_v2.0.a1
pyrus_communis	pycom13g19610 pycom16g18980
rosa_chinensis	RchiOBHm_Chr4g0395471
rosa_laevigata	RLG00000009620
rosa_multiflora	Rmu_sc0001951.1_g000003 Rmu_sc0011701.1_g000032
rosa_roxburghii	Rroxscaffold_5G00340410
rosa_rugosa	Rorug03G0356000 Rorug03G0356000 Rorug03G0356000
rosa_samantha	Rh4AG060400 Rh4AG062100 Rh4BG059300 Rh4CG065000 Rh4DG055300
rosa_wichuraiana	Rw4G005070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1167
Acc36I	ACCTGC	2 cut(s)	583, 775
AccB1I	GGYRCC	2 cut(s)	529, 1231
AccBSI	CCGCTC	1 cut(s)	1156
AccI	GTMKAC	1 cut(s)	1143
AccII	CGCG	1 cut(s)	750
AciI	CCGC	2 cut(s)	159, 1156
AclWI	GGATC	3 cut(s)	402, 617, 630
AcoI	YGGCCR	2 cut(s)	3, 1339
AcsI	RAATTY	4 cut(s)	295, 986, 1073, 1258
AcuI	CTGAAG	5 cut(s)	62, 777, 804, 993, 1038
AfaI	GTAC	5 cut(s)	65, 363, 675, 942, 1403
AfiI	CCNNNNNNNGG	1 cut(s)	1228
AflIII	ACRYGT	2 cut(s)	748, 1083
AgsI	TTSAA	7 cut(s)	218, 292, 602, 656, 869, 1073, 1151
AjnI	CCWGG	2 cut(s)	149, 1293
AluBI	AGCT	5 cut(s)	685, 782, 1218, 1278, 1365
AluI	AGCT	5 cut(s)	685, 782, 1218, 1278, 1365
Alw21I	GWGCWC	2 cut(s)	102, 811
Alw26I	GTCTC	4 cut(s)	513, 878, 1153, 1255
Alw44I	GTGCAC	2 cut(s)	98, 807
AlwI	GGATC	3 cut(s)	402, 617, 630
Ama87I	CYCGRG	1 cut(s)	200
AoxI	GGCC	4 cut(s)	3, 872, 1110, 1339
ApaLI	GTGCAC	2 cut(s)	98, 807
ApeKI	GCWGC	9 cut(s)	32, 82, 85, 172, 589, 629, 685, 1012, 1215
ApoI	RAATTY	4 cut(s)	295, 986, 1073, 1258
AspLEI	GCGC	1 cut(s)	232
AspS9I	GGNCC	2 cut(s)	551, 964
AsuHPI	GGTGA	2 cut(s)	7, 1301
AsuII	TTCGAA	1 cut(s)	1077
AvaI	CYCGRG	1 cut(s)	200
AvaII	GGWCC	2 cut(s)	551, 964
AxyI	CCTNAGG	1 cut(s)	342
BaeGI	GKGCMC	3 cut(s)	102, 460, 811
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	622
BanI	GGYRCC	2 cut(s)	529, 1231
BanII	GRGCYC	1 cut(s)	720
BbsI	GAAGAC	1 cut(s)	1086
Bbv12I	GWGCWC	2 cut(s)	102, 811
BbvCI	CCTCAGC	1 cut(s)	786
BbvI	GCAGC	9 cut(s)	19, 94, 97, 159, 601, 616, 672, 1024, 1227
BccI	CCATC	5 cut(s)	134, 262, 781, 976, 1277
BceAI	ACGGC	1 cut(s)	1318
BcgI	CGANNNNNNTGC	2 cut(s)	621, 655
BciT130I	CCWGG	2 cut(s)	151, 1295
BcoDI	GTCTC	4 cut(s)	513, 878, 1153, 1255
BfaI	CTAG	1 cut(s)	908
BfmI	CTRYAG	3 cut(s)	630, 777, 876
BfuAI	ACCTGC	2 cut(s)	583, 775
BisI	GCNGC	9 cut(s)	33, 83, 86, 173, 590, 630, 686, 1013, 1216
BlsI	GCNGC	9 cut(s)	34, 84, 87, 174, 591, 631, 687, 1014, 1217
BmcAI	AGTACT	2 cut(s)	65, 1403
Bme1390I	CCNGG	2 cut(s)	151, 1295
Bme18I	GGWCC	2 cut(s)	551, 964
BmeT110I	CYCGRG	1 cut(s)	200
BmgT120I	GGNCC	2 cut(s)	551, 964
BmiI	GGNNCC	5 cut(s)	531, 624, 705, 966, 1233
BmrFI	CCNGG	2 cut(s)	151, 1295
BmsI	GCATC	3 cut(s)	418, 701, 860
BpiI	GAAGAC	1 cut(s)	1086
BpmI	CTGGAG	1 cut(s)	231
Bpu10I	CCTNAGC	3 cut(s)	36, 474, 786
Bpu14I	TTCGAA	1 cut(s)	1077
BpuEI	CTTGAG	1 cut(s)	992
BsaBI	GATNNNNATC	1 cut(s)	393
BsaI	GGTCTC	1 cut(s)	1153
BsaJI	CCNNGG	1 cut(s)	150
Bsc4I	CCNNNNNNNGG	1 cut(s)	1228
Bse118I	RCCGGY	2 cut(s)	814, 1112
Bse1I	ACTGG	2 cut(s)	479, 554
Bse21I	CCTNAGG	1 cut(s)	342
Bse3DI	GCAATG	1 cut(s)	846
Bse8I	GATNNNNATC	1 cut(s)	393
BseBI	CCWGG	2 cut(s)	151, 1295
BseDI	CCNNGG	1 cut(s)	150
BseGI	GGATG	2 cut(s)	409, 1051
BseJI	GATNNNNATC	1 cut(s)	393
BseLI	CCNNNNNNNGG	1 cut(s)	1228
BseMI	GCAATG	1 cut(s)	846
BseMII	CTCAG	7 cut(s)	50, 356, 443, 465, 597, 800, 1389
BseNI	ACTGG	2 cut(s)	479, 554
BseRI	GAGGAG	4 cut(s)	322, 774, 995, 1282
BseSI	GKGCMC	3 cut(s)	102, 460, 811
BseXI	GCAGC	9 cut(s)	19, 94, 97, 159, 601, 616, 672, 1024, 1227
BseYI	CCCAGC	1 cut(s)	1130
BsgI	GTGCAG	2 cut(s)	681, 753
Bsh1236I	CGCG	1 cut(s)	750
BshFI	GGCC	4 cut(s)	5, 874, 1112, 1341
BshNI	GGYRCC	2 cut(s)	529, 1231
BsiHKAI	GWGCWC	2 cut(s)	102, 811
BsiHKCI	CYCGRG	1 cut(s)	200
BsiSI	CCGG	2 cut(s)	815, 1113
BslFI	GGGAC	2 cut(s)	58, 167
BslI	CCNNNNNNNGG	1 cut(s)	1228
BsmAI	GTCTC	4 cut(s)	513, 878, 1153, 1255
BsmFI	GGGAC	2 cut(s)	58, 167
BsmI	GAATGC	2 cut(s)	174, 232
BsnI	GGCC	4 cut(s)	5, 874, 1112, 1341
Bso31I	GGTCTC	1 cut(s)	1153
BsoBI	CYCGRG	1 cut(s)	200
Bsp119I	TTCGAA	1 cut(s)	1077
Bsp1286I	GDGCHC	4 cut(s)	102, 460, 720, 811
Bsp1407I	TGTACA	1 cut(s)	673
Bsp143I	GATC	2 cut(s)	394, 622
BspACI	CCGC	2 cut(s)	159, 1156
BspANI	GGCC	4 cut(s)	5, 874, 1112, 1341
BspCNI	CTCAG	7 cut(s)	49, 355, 444, 466, 598, 799, 1390
BspFNI	CGCG	1 cut(s)	750
BspLI	GGNNCC	5 cut(s)	531, 624, 705, 966, 1233
BspMAI	CTGCAG	1 cut(s)	634
BspMI	ACCTGC	2 cut(s)	583, 775
BspPI	GGATC	3 cut(s)	402, 617, 630
BspQI	GCTCTTC	1 cut(s)	1146
BspT104I	TTCGAA	1 cut(s)	1077
BspT107I	GGYRCC	2 cut(s)	529, 1231
BspTNI	GGTCTC	1 cut(s)	1153
BsrBI	CCGCTC	1 cut(s)	1156
BsrDI	GCAATG	1 cut(s)	846
BsrFI	RCCGGY	2 cut(s)	814, 1112
BsrGI	TGTACA	1 cut(s)	673
BsrI	ACTGG	2 cut(s)	479, 554
BssAI	RCCGGY	2 cut(s)	814, 1112
BssECI	CCNNGG	1 cut(s)	150
BssMI	GATC	2 cut(s)	394, 622
BssNAI	GTATAC	1 cut(s)	1144
Bst1107I	GTATAC	1 cut(s)	1144
Bst2UI	CCWGG	2 cut(s)	151, 1295
Bst4CI	ACNGT	4 cut(s)	187, 585, 647, 1169
Bst6I	CTCTTC	2 cut(s)	1146, 1186
BstAPI	GCANNNNNTGC	1 cut(s)	586
BstAUI	TGTACA	1 cut(s)	673
BstBI	TTCGAA	1 cut(s)	1077
BstC8I	GCNNGC	1 cut(s)	690
BstDEI	CTNAG	7 cut(s)	36, 342, 452, 474, 606, 786, 1398
BstEII	GGTNACC	1 cut(s)	1289
BstF5I	GGATG	2 cut(s)	409, 1051
BstFNI	CGCG	1 cut(s)	750
BstHHI	GCGC	1 cut(s)	232
BstKTI	GATC	2 cut(s)	397, 625
BstMAI	GTCTC	4 cut(s)	513, 878, 1153, 1255
BstMBI	GATC	2 cut(s)	394, 622
BstMWI	GCNNNNNNNGC	7 cut(s)	82, 141, 586, 724, 815, 887, 1109
BstNI	CCWGG	2 cut(s)	151, 1295
BstNSI	RCATGY	1 cut(s)	1087
BstPI	GGTNACC	1 cut(s)	1289
BstSCI	CCNGG	2 cut(s)	149, 1293
BstSFI	CTRYAG	3 cut(s)	630, 777, 876
BstSLI	GKGCMC	3 cut(s)	102, 460, 811
BstUI	CGCG	1 cut(s)	750
BstV1I	GCAGC	9 cut(s)	19, 94, 97, 159, 601, 616, 672, 1024, 1227
BstV2I	GAAGAC	1 cut(s)	1086
BstX2I	RGATCY	1 cut(s)	622
BstYI	RGATCY	1 cut(s)	622
BstZ17I	GTATAC	1 cut(s)	1144
Bsu36I	CCTNAGG	1 cut(s)	342
BsuRI	GGCC	4 cut(s)	5, 874, 1112, 1341
BtsCI	GGATG	2 cut(s)	409, 1051
BtsI	GCAGTG	2 cut(s)	27, 669
BtsIMutI	CAGTG	3 cut(s)	27, 486, 669
BveI	ACCTGC	2 cut(s)	583, 775
Cac8I	GCNNGC	1 cut(s)	690
CfoI	GCGC	1 cut(s)	232
Cfr10I	RCCGGY	2 cut(s)	814, 1112
Cfr13I	GGNCC	2 cut(s)	551, 964
Csp6I	GTAC	5 cut(s)	64, 362, 674, 941, 1402
CviAII	CATG	2 cut(s)	616, 1084
CviQI	GTAC	5 cut(s)	64, 362, 674, 941, 1402
DdeI	CTNAG	7 cut(s)	36, 342, 452, 474, 606, 786, 1398
DpnI	GATC	2 cut(s)	396, 624
DpnII	GATC	2 cut(s)	394, 622
DrdI	GACNNNNNNGTC	1 cut(s)	1167
DseDI	GACNNNNNNGTC	1 cut(s)	1167
EaeI	YGGCCR	2 cut(s)	3, 1339
Eam1104I	CTCTTC	2 cut(s)	1146, 1186
EarI	CTCTTC	2 cut(s)	1146, 1186
Eco147I	AGGCCT	1 cut(s)	874
Eco24I	GRGCYC	1 cut(s)	720
Eco31I	GGTCTC	1 cut(s)	1153
Eco47I	GGWCC	2 cut(s)	551, 964
Eco57I	CTGAAG	5 cut(s)	62, 777, 804, 993, 1038
Eco81I	CCTNAGG	1 cut(s)	342
Eco88I	CYCGRG	1 cut(s)	200
Eco91I	GGTNACC	1 cut(s)	1289
EcoO65I	GGTNACC	1 cut(s)	1289
EcoRI	GAATTC	1 cut(s)	1073
EcoRII	CCWGG	2 cut(s)	149, 1293
EcoT22I	ATGCAT	1 cut(s)	1066
EcoT38I	GRGCYC	1 cut(s)	720
FaeI	CATG	2 cut(s)	619, 1087
FaqI	GGGAC	2 cut(s)	58, 167
FatI	CATG	2 cut(s)	615, 1083
FblI	GTMKAC	1 cut(s)	1143
Fnu4HI	GCNGC	9 cut(s)	33, 83, 86, 173, 590, 630, 686, 1013, 1216
FokI	GGATG	2 cut(s)	396, 1058
FriOI	GRGCYC	1 cut(s)	720
Fsp4HI	GCNGC	9 cut(s)	33, 83, 86, 173, 590, 630, 686, 1013, 1216
FspBI	CTAG	1 cut(s)	908
GlaI	GCGC	1 cut(s)	231
GluI	GCNGC	9 cut(s)	33, 83, 86, 173, 590, 630, 686, 1013, 1216
GsaI	CCCAGC	1 cut(s)	1134
GsuI	CTGGAG	1 cut(s)	231
HaeIII	GGCC	4 cut(s)	5, 874, 1112, 1341
HapII	CCGG	2 cut(s)	815, 1113
HhaI	GCGC	1 cut(s)	232
Hin1II	CATG	2 cut(s)	619, 1087
Hin6I	GCGC	1 cut(s)	230
HinP1I	GCGC	1 cut(s)	230
HincII	GTYRAC	2 cut(s)	559, 799
HindII	GTYRAC	2 cut(s)	559, 799
HinfI	GANTC	6 cut(s)	116, 242, 443, 602, 1036, 1323
HpaI	GTTAAC	1 cut(s)	799
HpaII	CCGG	2 cut(s)	815, 1113
HphI	GGTGA	2 cut(s)	7, 1301
Hpy166II	GTNNAC	6 cut(s)	100, 559, 799, 809, 964, 1144
Hpy188I	TCNGA	9 cut(s)	115, 324, 607, 823, 973, 1125, 1228, 1257, 1399
Hpy188III	TCNNGA	8 cut(s)	165, 210, 223, 344, 440, 473, 1182, 1377
Hpy8I	GTNNAC	6 cut(s)	100, 559, 799, 809, 964, 1144
HpyAV	CCTTC	5 cut(s)	22, 801, 1013, 1191, 1203
HpyCH4III	ACNGT	4 cut(s)	187, 585, 647, 1169
HpyCH4IV	ACGT	1 cut(s)	960
HpyF10VI	GCNNNNNNNGC	7 cut(s)	82, 141, 586, 724, 815, 887, 1109
HpyF3I	CTNAG	7 cut(s)	36, 342, 452, 474, 606, 786, 1398
HpySE526I	ACGT	1 cut(s)	960
Hsp92II	CATG	2 cut(s)	619, 1087
HspAI	GCGC	1 cut(s)	230
KspAI	GTTAAC	1 cut(s)	799
Kzo9I	GATC	2 cut(s)	394, 622
LguI	GCTCTTC	1 cut(s)	1146
LmnI	GCTCC	1 cut(s)	787
Lsp1109I	GCAGC	9 cut(s)	19, 94, 97, 159, 601, 616, 672, 1024, 1227
LweI	GCATC	3 cut(s)	418, 701, 860
MaeI	CTAG	1 cut(s)	908
MaeII	ACGT	1 cut(s)	960
MaeIII	GTNAC	4 cut(s)	25, 195, 1169, 1289
MalI	GATC	2 cut(s)	396, 624
MbiI	CCGCTC	1 cut(s)	1156
MboI	GATC	2 cut(s)	394, 622
MboII	GAAGA	5 cut(s)	923, 929, 1091, 1163, 1203
MflI	RGATCY	1 cut(s)	622
MhlI	GDGCHC	4 cut(s)	102, 460, 720, 811
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	9 cut(s)	104, 295, 468, 487, 635, 986, 994, 1073, 1258
MluI	ACGCGT	1 cut(s)	748
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	437, 1045
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	1066
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	3 cut(s)	366, 798, 993
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	685
MspI	CCGG	2 cut(s)	815, 1113
MspR9I	CCNGG	2 cut(s)	151, 1295
Mva1269I	GAATGC	2 cut(s)	174, 232
MvaI	CCWGG	2 cut(s)	151, 1295
MvnI	CGCG	1 cut(s)	750
MwoI	GCNNNNNNNGC	7 cut(s)	82, 141, 586, 724, 815, 887, 1109
NdeII	GATC	2 cut(s)	394, 622
NlaIII	CATG	2 cut(s)	619, 1087
NlaIV	GGNNCC	5 cut(s)	531, 624, 705, 966, 1233
NmuCI	GTSAC	4 cut(s)	25, 195, 1169, 1289
NsiI	ATGCAT	1 cut(s)	1066
NspI	RCATGY	1 cut(s)	1087
NspV	TTCGAA	1 cut(s)	1077
PceI	AGGCCT	1 cut(s)	874
PciI	ACATGT	1 cut(s)	1083
PciSI	GCTCTTC	1 cut(s)	1146
PctI	GAATGC	2 cut(s)	174, 232
PfeI	GAWTC	4 cut(s)	116, 242, 602, 1323
PkrI	GCNGC	9 cut(s)	34, 84, 87, 174, 591, 631, 687, 1014, 1217
PleI	GAGTC	2 cut(s)	437, 1044
PpsI	GAGTC	2 cut(s)	437, 1044
PscI	ACATGT	1 cut(s)	1083
Psp6I	CCWGG	2 cut(s)	149, 1293
PspEI	GGTNACC	1 cut(s)	1289
PspFI	CCCAGC	1 cut(s)	1130
PspGI	CCWGG	2 cut(s)	149, 1293
PspN4I	GGNNCC	5 cut(s)	531, 624, 705, 966, 1233
PspPI	GGNCC	2 cut(s)	551, 964
PstI	CTGCAG	1 cut(s)	634
PsuI	RGATCY	1 cut(s)	622
PvuII	CAGCTG	1 cut(s)	685
RsaI	GTAC	5 cut(s)	65, 363, 675, 942, 1403
RsaNI	GTAC	5 cut(s)	64, 362, 674, 941, 1402
SapI	GCTCTTC	1 cut(s)	1146
SaqAI	TTAA	3 cut(s)	366, 798, 993
SatI	GCNGC	9 cut(s)	33, 83, 86, 173, 590, 630, 686, 1013, 1216
Sau3AI	GATC	2 cut(s)	394, 622
Sau96I	GGNCC	2 cut(s)	551, 964
ScaI	AGTACT	2 cut(s)	65, 1403
SchI	GAGTC	2 cut(s)	437, 1045
ScrFI	CCNGG	2 cut(s)	151, 1295
SduI	GDGCHC	4 cut(s)	102, 460, 720, 811
SfaNI	GCATC	3 cut(s)	418, 701, 860
SfcI	CTRYAG	3 cut(s)	630, 777, 876
SfuI	TTCGAA	1 cut(s)	1077
SinI	GGWCC	2 cut(s)	551, 964
SmlI	CTYRAG	1 cut(s)	1007
SmoI	CTYRAG	1 cut(s)	1007
Sse9I	AATT	9 cut(s)	104, 295, 468, 487, 635, 986, 994, 1073, 1258
SseBI	AGGCCT	1 cut(s)	874
SsiI	CCGC	2 cut(s)	159, 1156
SspI	AATATT	1 cut(s)	1391
SspMI	CTAG	1 cut(s)	908
StuI	AGGCCT	1 cut(s)	874
StyD4I	CCNGG	2 cut(s)	149, 1293
TaaI	ACNGT	4 cut(s)	187, 585, 647, 1169
TaiI	ACGT	1 cut(s)	963
TaqI	TCGA	3 cut(s)	641, 1077, 1183
TasI	AATT	9 cut(s)	104, 295, 468, 487, 635, 986, 994, 1073, 1258
TatI	WGTACW	4 cut(s)	63, 361, 673, 1401
TfiI	GAWTC	4 cut(s)	116, 242, 602, 1323
Tru1I	TTAA	3 cut(s)	366, 798, 993
Tru9I	TTAA	3 cut(s)	366, 798, 993
TscAI	CASTG	3 cut(s)	34, 486, 669
TseFI	GTSAC	4 cut(s)	25, 195, 1169, 1289
TseI	GCWGC	9 cut(s)	32, 82, 85, 172, 589, 629, 685, 1012, 1215
Tsp45I	GTSAC	4 cut(s)	25, 195, 1169, 1289
TspDTI	ATGAA	7 cut(s)	373, 392, 639, 909, 930, 936, 1383
TspGWI	ACGGA	1 cut(s)	922
TspRI	CASTG	3 cut(s)	34, 486, 669
VneI	GTGCAC	2 cut(s)	98, 807
VpaK11BI	GGWCC	2 cut(s)	551, 964
XapI	RAATTY	4 cut(s)	295, 986, 1073, 1258
XceI	RCATGY	1 cut(s)	1087
XcmI	CCANNNNNNNNNTGG	1 cut(s)	523
XmiI	GTMKAC	1 cut(s)	1143
XspI	CTAG	1 cut(s)	908
ZrmI	AGTACT	2 cut(s)	65, 1403
Zsp2I	ATGCAT	1 cut(s)	1066

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.