Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0009677

Physical Location & Seq

Genomic Coordinates Reverse (-)

10194007 .. 10197988

Gene Structure 3982 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G005070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1374 bp

ATGGCCACGCCCTTCACCATTCCCGTCACTGCTGCTCAGGTTGGGACTTACTTTGTGGGGCAGTACTATCAAGTGCTTCAGCAGCAGCCAGACTATGTGCACCAATTCTACTCCGAGTCCAGCACTATGCTTCGCATTGATGGCAACACCAGGGACACCGCCTCTGGAATGCTGCAAATCCATACAGTTGTTATGTCACTCGGGTATTCTGGAGTTGAAATCAAGACAGCGCATTCTTTGGAATCTTGGAATGGAGGCGTTCTTGTGATGGTTTCTGGCTCTGTGCATTTGAAAAATTTTGGAGGGAGGAGGAACTTTAAAGGTTATTTTGTACTCAATGATATATTTCACTTCATTGATGAGGATCAAGTTCATCAGCATCCAGCAGTCTTATTAGCCCATAGCACTCTTGACTCCAAACTGAGTGCCCCTACTACAATTCCTGAGCCAGTGGCTAATTATATGATGAGTGGAGAAACTCATACCAGAGACTATGTGGTGCCTGATGTCAATGGAAATGGTCCAGTTGACAACTATGGCTATGCAGAGCAACGGTTGCAGCAGGTTGTTGAATCTGAGAATATCATGGAGGATCCTGCTGCAGAATTGTCTAACGGTTCATTTCAAAGTGCAGTGAATGTTGTACAAGAACAGCTGCCTGCATCTGTTGAGGAACCTATTGGAGAGCCCCAGAAGCAGACCTATGCCTCTATATTACGCGTTGCTAAAGGACAACCTGCACCATCTGTAGCTCCTCAGCCTTCAGTTAACAAGAGTGCACCACCGGCTTCAGATTGGAATGACTTTTCACAGCCCATTGCATCGTCCAATGCAGTTGAAAGGCCTGTAGCAGAGACAGCAGATGAAGTTTCTGCCCTAGAAGATGAAGATGAAATCAAGTCCGTCTATGTACGAAACTTGCCACCTAACGTGGACCCATCTGAAGTTGAGGAGGAATTTGTTAATTTTGGAAAACTCAAGCAGCCTGAAGGAGTGGTCATTAGGAGTCGCAAGGATGTTGGTGTTTGCTATGCATTTGTTGAATTCGAAGACATGTCTGGTGTTCGTAATGCTGTCAAGGCCGGTAGTGTTCAGATTGCTGGGCGACAAGTATACATTGAAGAGCGGAGACCAAACAGCCACATTCCCTCTCGAATGGGAAGAAGGGGTAGAGGAAGGGGCAGCTACCAATCAGAGGTGCCAAGAGGTCGTTTTGTCTCTCGGAATTTTGGGAGGAGTGGAAGCTACGATGGAGGTGACCAGGACTACGGTAGACCAAGAGGAAATGGATTCTATCGTCCAAGTGGCCGACAAGACAGGGCAAACCCAAGCTACCAATCGTCAAGAAACGGGCAATATTCATCTGAGTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006508 GO:0006807 GO:0006914 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0010494 GO:0016236 GO:0016579 GO:0019538 GO:0032386 GO:0032879 GO:0032991 GO:0034517 GO:0035770 GO:0035973 GO:0036211 GO:0036464 GO:0043021 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044877 GO:0050789 GO:0050794 GO:0051049 GO:0060341 GO:0060627 GO:0060628 GO:0061912 GO:0061919 GO:0065007 GO:0070646 GO:0070647 GO:0071704 GO:0097159 GO:1901363 GO:1901564 GO:1905538 GO:1990861 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NTF2 RRM_1

Protein Analysis

457

Amino Acids

50.44

Weight (kDa)

5.33

Isoelectric Point (pI)

57.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NTF2	PF02136	14 - 113	6.8e-16	Nuclear transport factor 2 (NTF2) domain
RRM_1	PF00076	302 - 366	1.1e-07	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009677)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g04660 FvH4_4g04660
malus_domestica	MD13G1221800.v1.1 MD16G1226700.v1.1
prunus_persica	Prupe.1G048900_v2.0.a1 Prupe.1G048900_v2.0.a1
pyrus_communis	pycom13g19610 pycom16g18980
rosa_chinensis	RchiOBHm_Chr4g0395471
rosa_laevigata	RLG00000009620
rosa_multiflora	Rmu_sc0001951.1_g000003 Rmu_sc0011701.1_g000032
rosa_roxburghii	Rroxscaffold_5G00340410
rosa_rugosa	Rorug03G0356000 Rorug03G0356000 Rorug03G0356000
rosa_samantha	Rh4AG060400 Rh4AG062100 Rh4BG059300 Rh4CG065000 Rh4DG055300
rosa_wichuraiana	Rw4G005070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	553, 745
AccB1I	GGYRCC	2 cut(s)	499, 1198
AccBSI	CCGCTC	1 cut(s)	1126
AccI	GTMKAC	2 cut(s)	1113, 1273
AccII	CGCG	1 cut(s)	720
AciI	CCGC	2 cut(s)	159, 1126
AclWI	GGATC	3 cut(s)	372, 587, 600
AcoI	YGGCCR	2 cut(s)	3, 1306
AcsI	RAATTY	4 cut(s)	295, 956, 1043, 1225
AcuI	CTGAAG	5 cut(s)	62, 747, 774, 963, 1008
AfaI	GTAC	5 cut(s)	65, 333, 645, 912, 1370
AfiI	CCNNNNNNNGG	1 cut(s)	1195
AflIII	ACRYGT	2 cut(s)	718, 1053
AgsI	TTSAA	7 cut(s)	218, 292, 572, 626, 839, 1043, 1121
AjnI	CCWGG	2 cut(s)	149, 1260
AluBI	AGCT	5 cut(s)	655, 752, 1185, 1245, 1332
AluI	AGCT	5 cut(s)	655, 752, 1185, 1245, 1332
Alw21I	GWGCWC	2 cut(s)	102, 781
Alw26I	GTCTC	4 cut(s)	483, 848, 1123, 1222
Alw44I	GTGCAC	2 cut(s)	98, 777
AlwI	GGATC	3 cut(s)	372, 587, 600
Ama87I	CYCGRG	1 cut(s)	200
AoxI	GGCC	4 cut(s)	3, 842, 1080, 1306
ApaLI	GTGCAC	2 cut(s)	98, 777
ApeKI	GCWGC	9 cut(s)	32, 82, 85, 172, 559, 599, 655, 982, 1182
ApoI	RAATTY	4 cut(s)	295, 956, 1043, 1225
AspLEI	GCGC	1 cut(s)	232
AspS9I	GGNCC	2 cut(s)	521, 934
AsuHPI	GGTGA	2 cut(s)	7, 1268
AsuII	TTCGAA	1 cut(s)	1047
AvaI	CYCGRG	1 cut(s)	200
AvaII	GGWCC	2 cut(s)	521, 934
BaeGI	GKGCMC	3 cut(s)	102, 430, 781
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	592
BanI	GGYRCC	2 cut(s)	499, 1198
BanII	GRGCYC	1 cut(s)	690
BbsI	GAAGAC	1 cut(s)	1056
Bbv12I	GWGCWC	2 cut(s)	102, 781
BbvCI	CCTCAGC	1 cut(s)	756
BbvI	GCAGC	9 cut(s)	19, 94, 97, 159, 571, 586, 642, 994, 1194
BccI	CCATC	5 cut(s)	134, 262, 751, 946, 1244
BciT130I	CCWGG	2 cut(s)	151, 1262
BcoDI	GTCTC	4 cut(s)	483, 848, 1123, 1222
BfaI	CTAG	1 cut(s)	878
BfmI	CTRYAG	3 cut(s)	600, 747, 846
BfuAI	ACCTGC	2 cut(s)	553, 745
BisI	GCNGC	9 cut(s)	33, 83, 86, 173, 560, 600, 656, 983, 1183
BlsI	GCNGC	9 cut(s)	34, 84, 87, 174, 561, 601, 657, 984, 1184
BmcAI	AGTACT	2 cut(s)	65, 1370
Bme1390I	CCNGG	2 cut(s)	151, 1262
Bme18I	GGWCC	2 cut(s)	521, 934
BmeT110I	CYCGRG	1 cut(s)	200
BmgT120I	GGNCC	2 cut(s)	521, 934
BmiI	GGNNCC	5 cut(s)	501, 594, 675, 936, 1200
BmrFI	CCNGG	2 cut(s)	151, 1262
BmsI	GCATC	3 cut(s)	388, 671, 830
BpiI	GAAGAC	1 cut(s)	1056
BpmI	CTGGAG	1 cut(s)	231
Bpu10I	CCTNAGC	3 cut(s)	36, 444, 756
Bpu14I	TTCGAA	1 cut(s)	1047
BpuEI	CTTGAG	1 cut(s)	962
BsaBI	GATNNNNATC	1 cut(s)	363
BsaI	GGTCTC	1 cut(s)	1123
BsaJI	CCNNGG	1 cut(s)	150
Bsc4I	CCNNNNNNNGG	1 cut(s)	1195
Bse118I	RCCGGY	2 cut(s)	784, 1082
Bse1I	ACTGG	2 cut(s)	449, 524
Bse3DI	GCAATG	1 cut(s)	816
Bse8I	GATNNNNATC	1 cut(s)	363
BseBI	CCWGG	2 cut(s)	151, 1262
BseDI	CCNNGG	1 cut(s)	150
BseGI	GGATG	2 cut(s)	379, 1021
BseJI	GATNNNNATC	1 cut(s)	363
BseLI	CCNNNNNNNGG	1 cut(s)	1195
BseMI	GCAATG	1 cut(s)	816
BseMII	CTCAG	6 cut(s)	50, 413, 435, 567, 770, 1356
BseNI	ACTGG	2 cut(s)	449, 524
BseRI	GAGGAG	4 cut(s)	322, 744, 965, 1249
BseSI	GKGCMC	3 cut(s)	102, 430, 781
BseXI	GCAGC	9 cut(s)	19, 94, 97, 159, 571, 586, 642, 994, 1194
BseYI	CCCAGC	1 cut(s)	1100
BsgI	GTGCAG	2 cut(s)	651, 723
Bsh1236I	CGCG	1 cut(s)	720
BshFI	GGCC	4 cut(s)	5, 844, 1082, 1308
BshNI	GGYRCC	2 cut(s)	499, 1198
BsiHKAI	GWGCWC	2 cut(s)	102, 781
BsiHKCI	CYCGRG	1 cut(s)	200
BsiSI	CCGG	2 cut(s)	785, 1083
BslFI	GGGAC	2 cut(s)	58, 167
BslI	CCNNNNNNNGG	1 cut(s)	1195
BsmAI	GTCTC	4 cut(s)	483, 848, 1123, 1222
BsmFI	GGGAC	2 cut(s)	58, 167
BsmI	GAATGC	2 cut(s)	174, 232
BsnI	GGCC	4 cut(s)	5, 844, 1082, 1308
Bso31I	GGTCTC	1 cut(s)	1123
BsoBI	CYCGRG	1 cut(s)	200
Bsp119I	TTCGAA	1 cut(s)	1047
Bsp1286I	GDGCHC	4 cut(s)	102, 430, 690, 781
Bsp1407I	TGTACA	1 cut(s)	643
Bsp143I	GATC	2 cut(s)	364, 592
BspACI	CCGC	2 cut(s)	159, 1126
BspANI	GGCC	4 cut(s)	5, 844, 1082, 1308
BspCNI	CTCAG	6 cut(s)	49, 414, 436, 568, 769, 1357
BspFNI	CGCG	1 cut(s)	720
BspLI	GGNNCC	5 cut(s)	501, 594, 675, 936, 1200
BspMAI	CTGCAG	1 cut(s)	604
BspMI	ACCTGC	2 cut(s)	553, 745
BspPI	GGATC	3 cut(s)	372, 587, 600
BspQI	GCTCTTC	1 cut(s)	1116
BspT104I	TTCGAA	1 cut(s)	1047
BspT107I	GGYRCC	2 cut(s)	499, 1198
BspTNI	GGTCTC	1 cut(s)	1123
BsrBI	CCGCTC	1 cut(s)	1126
BsrDI	GCAATG	1 cut(s)	816
BsrFI	RCCGGY	2 cut(s)	784, 1082
BsrGI	TGTACA	1 cut(s)	643
BsrI	ACTGG	2 cut(s)	449, 524
BssAI	RCCGGY	2 cut(s)	784, 1082
BssECI	CCNNGG	1 cut(s)	150
BssMI	GATC	2 cut(s)	364, 592
BssNAI	GTATAC	1 cut(s)	1114
Bst1107I	GTATAC	1 cut(s)	1114
Bst2UI	CCWGG	2 cut(s)	151, 1262
Bst4CI	ACNGT	4 cut(s)	187, 555, 617, 1271
Bst6I	CTCTTC	1 cut(s)	1116
BstAPI	GCANNNNNTGC	1 cut(s)	556
BstAUI	TGTACA	1 cut(s)	643
BstBI	TTCGAA	1 cut(s)	1047
BstC8I	GCNNGC	1 cut(s)	660
BstDEI	CTNAG	6 cut(s)	36, 422, 444, 576, 756, 1365
BstEII	GGTNACC	1 cut(s)	1256
BstF5I	GGATG	2 cut(s)	379, 1021
BstFNI	CGCG	1 cut(s)	720
BstHHI	GCGC	1 cut(s)	232
BstKTI	GATC	2 cut(s)	367, 595
BstMAI	GTCTC	4 cut(s)	483, 848, 1123, 1222
BstMBI	GATC	2 cut(s)	364, 592
BstMWI	GCNNNNNNNGC	7 cut(s)	82, 141, 556, 694, 785, 857, 1079
BstNI	CCWGG	2 cut(s)	151, 1262
BstNSI	RCATGY	1 cut(s)	1057
BstPI	GGTNACC	1 cut(s)	1256
BstSCI	CCNGG	2 cut(s)	149, 1260
BstSFI	CTRYAG	3 cut(s)	600, 747, 846
BstSLI	GKGCMC	3 cut(s)	102, 430, 781
BstUI	CGCG	1 cut(s)	720
BstV1I	GCAGC	9 cut(s)	19, 94, 97, 159, 571, 586, 642, 994, 1194
BstV2I	GAAGAC	1 cut(s)	1056
BstX2I	RGATCY	1 cut(s)	592
BstYI	RGATCY	1 cut(s)	592
BstZ17I	GTATAC	1 cut(s)	1114
BsuRI	GGCC	4 cut(s)	5, 844, 1082, 1308
BtsCI	GGATG	2 cut(s)	379, 1021
BtsI	GCAGTG	2 cut(s)	27, 639
BtsIMutI	CAGTG	3 cut(s)	27, 456, 639
BveI	ACCTGC	2 cut(s)	553, 745
Cac8I	GCNNGC	1 cut(s)	660
CfoI	GCGC	1 cut(s)	232
Cfr10I	RCCGGY	2 cut(s)	784, 1082
Cfr13I	GGNCC	2 cut(s)	521, 934
Csp6I	GTAC	5 cut(s)	64, 332, 644, 911, 1369
CviAII	CATG	2 cut(s)	586, 1054
CviQI	GTAC	5 cut(s)	64, 332, 644, 911, 1369
DdeI	CTNAG	6 cut(s)	36, 422, 444, 576, 756, 1365
DpnI	GATC	2 cut(s)	366, 594
DpnII	GATC	2 cut(s)	364, 592
DraI	TTTAAA	1 cut(s)	319
EaeI	YGGCCR	2 cut(s)	3, 1306
Eam1104I	CTCTTC	1 cut(s)	1116
EarI	CTCTTC	1 cut(s)	1116
Eco147I	AGGCCT	1 cut(s)	844
Eco24I	GRGCYC	1 cut(s)	690
Eco31I	GGTCTC	1 cut(s)	1123
Eco47I	GGWCC	2 cut(s)	521, 934
Eco57I	CTGAAG	5 cut(s)	62, 747, 774, 963, 1008
Eco88I	CYCGRG	1 cut(s)	200
Eco91I	GGTNACC	1 cut(s)	1256
EcoO65I	GGTNACC	1 cut(s)	1256
EcoRI	GAATTC	1 cut(s)	1043
EcoRII	CCWGG	2 cut(s)	149, 1260
EcoT22I	ATGCAT	1 cut(s)	1036
EcoT38I	GRGCYC	1 cut(s)	690
FaeI	CATG	2 cut(s)	589, 1057
FaqI	GGGAC	2 cut(s)	58, 167
FatI	CATG	2 cut(s)	585, 1053
FblI	GTMKAC	2 cut(s)	1113, 1273
Fnu4HI	GCNGC	9 cut(s)	33, 83, 86, 173, 560, 600, 656, 983, 1183
FokI	GGATG	2 cut(s)	366, 1028
FriOI	GRGCYC	1 cut(s)	690
Fsp4HI	GCNGC	9 cut(s)	33, 83, 86, 173, 560, 600, 656, 983, 1183
FspBI	CTAG	1 cut(s)	878
GlaI	GCGC	1 cut(s)	231
GluI	GCNGC	9 cut(s)	33, 83, 86, 173, 560, 600, 656, 983, 1183
GsaI	CCCAGC	1 cut(s)	1104
GsuI	CTGGAG	1 cut(s)	231
HaeIII	GGCC	4 cut(s)	5, 844, 1082, 1308
HapII	CCGG	2 cut(s)	785, 1083
HhaI	GCGC	1 cut(s)	232
Hin1II	CATG	2 cut(s)	589, 1057
Hin6I	GCGC	1 cut(s)	230
HinP1I	GCGC	1 cut(s)	230
HincII	GTYRAC	2 cut(s)	529, 769
HindII	GTYRAC	2 cut(s)	529, 769
HinfI	GANTC	6 cut(s)	116, 242, 413, 572, 1006, 1290
HpaI	GTTAAC	1 cut(s)	769
HpaII	CCGG	2 cut(s)	785, 1083
HphI	GGTGA	2 cut(s)	7, 1268
Hpy166II	GTNNAC	7 cut(s)	100, 529, 769, 779, 934, 1114, 1274
Hpy188I	TCNGA	8 cut(s)	115, 577, 793, 943, 1095, 1195, 1224, 1366
Hpy188III	TCNNGA	7 cut(s)	165, 210, 223, 410, 443, 1152, 1344
Hpy8I	GTNNAC	7 cut(s)	100, 529, 769, 779, 934, 1114, 1274
HpyAV	CCTTC	5 cut(s)	22, 771, 983, 1158, 1170
HpyCH4III	ACNGT	4 cut(s)	187, 555, 617, 1271
HpyCH4IV	ACGT	1 cut(s)	930
HpyF10VI	GCNNNNNNNGC	7 cut(s)	82, 141, 556, 694, 785, 857, 1079
HpyF3I	CTNAG	6 cut(s)	36, 422, 444, 576, 756, 1365
HpySE526I	ACGT	1 cut(s)	930
Hsp92II	CATG	2 cut(s)	589, 1057
HspAI	GCGC	1 cut(s)	230
KspAI	GTTAAC	1 cut(s)	769
Kzo9I	GATC	2 cut(s)	364, 592
LguI	GCTCTTC	1 cut(s)	1116
LmnI	GCTCC	1 cut(s)	757
Lsp1109I	GCAGC	9 cut(s)	19, 94, 97, 159, 571, 586, 642, 994, 1194
LweI	GCATC	3 cut(s)	388, 671, 830
MaeI	CTAG	1 cut(s)	878
MaeII	ACGT	1 cut(s)	930
MaeIII	GTNAC	3 cut(s)	25, 195, 1256
MalI	GATC	2 cut(s)	366, 594
MbiI	CCGCTC	1 cut(s)	1126
MboI	GATC	2 cut(s)	364, 592
MboII	GAAGA	5 cut(s)	893, 899, 1061, 1133, 1173
MflI	RGATCY	1 cut(s)	592
MhlI	GDGCHC	4 cut(s)	102, 430, 690, 781
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	9 cut(s)	104, 295, 438, 457, 605, 956, 964, 1043, 1225
MluI	ACGCGT	1 cut(s)	718
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	3 cut(s)	125, 407, 1015
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	1036
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	3 cut(s)	318, 768, 963
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	655
MspI	CCGG	2 cut(s)	785, 1083
MspR9I	CCNGG	2 cut(s)	151, 1262
Mva1269I	GAATGC	2 cut(s)	174, 232
MvaI	CCWGG	2 cut(s)	151, 1262
MvnI	CGCG	1 cut(s)	720
MwoI	GCNNNNNNNGC	7 cut(s)	82, 141, 556, 694, 785, 857, 1079
NdeII	GATC	2 cut(s)	364, 592
NlaIII	CATG	2 cut(s)	589, 1057
NlaIV	GGNNCC	5 cut(s)	501, 594, 675, 936, 1200
NmuCI	GTSAC	3 cut(s)	25, 195, 1256
NsiI	ATGCAT	1 cut(s)	1036
NspI	RCATGY	1 cut(s)	1057
NspV	TTCGAA	1 cut(s)	1047
PceI	AGGCCT	1 cut(s)	844
PciI	ACATGT	1 cut(s)	1053
PciSI	GCTCTTC	1 cut(s)	1116
PctI	GAATGC	2 cut(s)	174, 232
PfeI	GAWTC	3 cut(s)	242, 572, 1290
PkrI	GCNGC	9 cut(s)	34, 84, 87, 174, 561, 601, 657, 984, 1184
PleI	GAGTC	3 cut(s)	124, 407, 1014
PpsI	GAGTC	3 cut(s)	124, 407, 1014
PscI	ACATGT	1 cut(s)	1053
Psp6I	CCWGG	2 cut(s)	149, 1260
PspEI	GGTNACC	1 cut(s)	1256
PspFI	CCCAGC	1 cut(s)	1100
PspGI	CCWGG	2 cut(s)	149, 1260
PspN4I	GGNNCC	5 cut(s)	501, 594, 675, 936, 1200
PspPI	GGNCC	2 cut(s)	521, 934
PstI	CTGCAG	1 cut(s)	604
PsuI	RGATCY	1 cut(s)	592
PvuII	CAGCTG	1 cut(s)	655
RsaI	GTAC	5 cut(s)	65, 333, 645, 912, 1370
RsaNI	GTAC	5 cut(s)	64, 332, 644, 911, 1369
SapI	GCTCTTC	1 cut(s)	1116
SaqAI	TTAA	3 cut(s)	318, 768, 963
SatI	GCNGC	9 cut(s)	33, 83, 86, 173, 560, 600, 656, 983, 1183
Sau3AI	GATC	2 cut(s)	364, 592
Sau96I	GGNCC	2 cut(s)	521, 934
ScaI	AGTACT	2 cut(s)	65, 1370
SchI	GAGTC	3 cut(s)	125, 407, 1015
ScrFI	CCNGG	2 cut(s)	151, 1262
SduI	GDGCHC	4 cut(s)	102, 430, 690, 781
SfaNI	GCATC	3 cut(s)	388, 671, 830
SfcI	CTRYAG	3 cut(s)	600, 747, 846
SfuI	TTCGAA	1 cut(s)	1047
SinI	GGWCC	2 cut(s)	521, 934
SmlI	CTYRAG	1 cut(s)	977
SmoI	CTYRAG	1 cut(s)	977
Sse9I	AATT	9 cut(s)	104, 295, 438, 457, 605, 956, 964, 1043, 1225
SseBI	AGGCCT	1 cut(s)	844
SsiI	CCGC	2 cut(s)	159, 1126
SspI	AATATT	1 cut(s)	1358
SspMI	CTAG	1 cut(s)	878
StuI	AGGCCT	1 cut(s)	844
StyD4I	CCNGG	2 cut(s)	149, 1260
TaaI	ACNGT	4 cut(s)	187, 555, 617, 1271
TaiI	ACGT	1 cut(s)	933
TaqI	TCGA	2 cut(s)	1047, 1153
TasI	AATT	9 cut(s)	104, 295, 438, 457, 605, 956, 964, 1043, 1225
TatI	WGTACW	4 cut(s)	63, 331, 643, 1368
TfiI	GAWTC	3 cut(s)	242, 572, 1290
Tru1I	TTAA	3 cut(s)	318, 768, 963
Tru9I	TTAA	3 cut(s)	318, 768, 963
TscAI	CASTG	3 cut(s)	34, 456, 639
TseFI	GTSAC	3 cut(s)	25, 195, 1256
TseI	GCWGC	9 cut(s)	32, 82, 85, 172, 559, 599, 655, 982, 1182
Tsp45I	GTSAC	3 cut(s)	25, 195, 1256
TspDTI	ATGAA	7 cut(s)	343, 362, 609, 879, 900, 906, 1350
TspGWI	ACGGA	1 cut(s)	892
TspRI	CASTG	3 cut(s)	34, 456, 639
VneI	GTGCAC	2 cut(s)	98, 777
VpaK11BI	GGWCC	2 cut(s)	521, 934
XapI	RAATTY	4 cut(s)	295, 956, 1043, 1225
XceI	RCATGY	1 cut(s)	1057
XcmI	CCANNNNNNNNNTGG	1 cut(s)	493
XmiI	GTMKAC	2 cut(s)	1113, 1273
XspI	CTAG	1 cut(s)	878
ZrmI	AGTACT	2 cut(s)	65, 1370
Zsp2I	ATGCAT	1 cut(s)	1036

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.