Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0009677

Physical Location & Seq

Genomic Coordinates Forward (+)

8568655 .. 8572655

Gene Structure 4001 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG055300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1404 bp

ATGGCCACTCCCTTCACCATTCCTGTCACTGCTGCTCAGGTTGGGACTTACTTTGTGGGGCAGTACTATCAAGTGCTTCAGCAGCAGCCAGACTATGTGCACCAATTCTACTCCGAATCCAGCACTATGCTTCGCATTGATGGCAACACTAGGGACACCGCCTCTGGAATGCTGCAAATCCATACAGTTGTTATGTCACTCGGGTATTCTGGAGTTGAAATCAAGACAGCGCATTCTTTGGAATCTTGGAATGGAGGTGTTCTTGTGATGGTGTCTGGCTCTGTGCATTTGAAAATTTTTGGGGGGAGGAGGAACTTTGTTCAGACTTTTTTCCTTGCACCTCAGGAGAAAGGTTATTTTGTACTTAATGATATATTTCACTTCATTGATGAGGATCAAGTTCATCAGCATCCAGCAGTGTTATTAGCCCATAGCACTCTTGACTCCAAACTGAGTGCCCCTACTACAATTCCTGAGCCAGTGGCTAATTATATGATGAGTGGAGAAACTCATACCAGAGACTATGTGGTGCCTGATGTTAATGGAAATGGTCCAGTTGACAACTATGGCTATGCAGAGCAACGGTTGCAGCAGGTTGTCGAATCTGAGAATATCATGGAGGATCCTGCAGCAGAATTGTCTAACGGTTCATTTCAAAGTGCAGTGAATGTTGTACAAGAACAGCCTGCATCTGTTGAGGAACCTATTGGAGAGCCCCAGAAGCAGACCTATGCCTCTATATTACGCGTTGCTAAAGGACAACCTGCACCATCTGTAGCCCCTCAGCCTTCAGTTAACAAGAGTGCACCACTGGCTTCAGATTGGAATGACTTTTCACAGCCCATTGCATCGTCCAATGCAGTTGAAAGGCCTGTAGCAGAGACAGCAGATGAAGTTTCTGCCCTAGAAGATGAAGATGAAATCAAGTCCGTCTATGTACGAAACTTGCCACCTAACGTGGACGCATCTGAAGTTGAAGAGGAATTTGTTAATTTTGGAAAACTCAAGCAGCCTGAAGGAGTGGTCATTAGGAGTCGCAAGGATGTTGGTGTTTGCTATGCATTTGTTGAATTCGAAGACATGTCTGGTGTTCGTAATGCTGTCAAGGCCGGTAGTGTTCAGATTGCTGGGCGACAAGTATACATTGAAGAGCGGAGACCAAACAGCCACATTCCCTCTCGAATGGGAAGAGGAAGGGGTAGAGGAAGGGGCAGCTACCAATCAGAGGTGCCAAGAGGTCGTTTTGTCTCTCGGAATTTTGGGAGGAGTGGAAGCTACGATGGAGGTGACCAGGACTACGGCAGACCAAGAGGAAATGGATTCTATCGTCCAAGTGGCCGACAAGACAGGGCAAACCCAAGCTACCAATCGTCAAGAAACGGGCAATATTCATCTGAGTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006508 GO:0006807 GO:0006914 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0010494 GO:0016236 GO:0016579 GO:0019538 GO:0032386 GO:0032879 GO:0032991 GO:0034517 GO:0035770 GO:0035973 GO:0036211 GO:0036464 GO:0043021 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044877 GO:0050789 GO:0050794 GO:0051049 GO:0060341 GO:0060627 GO:0060628 GO:0061912 GO:0061919 GO:0065007 GO:0070646 GO:0070647 GO:0071704 GO:0097159 GO:1901363 GO:1901564 GO:1905538 GO:1990861 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NTF2 RRM_1

Protein Analysis

467

Amino Acids

51.53

Weight (kDa)

5.27

Isoelectric Point (pI)

56.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NTF2	PF02136	14 - 128	1.2e-26	Nuclear transport factor 2 (NTF2) domain
RRM_1	PF00076	311 - 375	2.9e-07	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009677)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g04660 FvH4_4g04660
malus_domestica	MD13G1221800.v1.1 MD16G1226700.v1.1
prunus_persica	Prupe.1G048900_v2.0.a1 Prupe.1G048900_v2.0.a1
pyrus_communis	pycom13g19610 pycom16g18980
rosa_chinensis	RchiOBHm_Chr4g0395471
rosa_laevigata	RLG00000009620
rosa_multiflora	Rmu_sc0001951.1_g000003 Rmu_sc0011701.1_g000032
rosa_roxburghii	Rroxscaffold_5G00340410
rosa_rugosa	Rorug03G0356000 Rorug03G0356000 Rorug03G0356000
rosa_samantha	Rh4AG060400 Rh4AG062100 Rh4BG059300 Rh4CG065000 Rh4DG055300
rosa_wichuraiana	Rw4G005070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	583, 772
AccB1I	GGYRCC	2 cut(s)	529, 1228
AccBSI	CCGCTC	1 cut(s)	1153
AccI	GTMKAC	1 cut(s)	1140
AccII	CGCG	1 cut(s)	747
AciI	CCGC	2 cut(s)	159, 1153
AclWI	GGATC	3 cut(s)	402, 617, 630
AcoI	YGGCCR	2 cut(s)	3, 1336
AcsI	RAATTY	4 cut(s)	294, 983, 1070, 1255
AcuI	CTGAAG	5 cut(s)	62, 774, 801, 990, 1035
AfaI	GTAC	5 cut(s)	65, 363, 675, 939, 1400
AfiI	CCNNNNNNNGG	1 cut(s)	1225
AflIII	ACRYGT	2 cut(s)	745, 1080
AgsI	TTSAA	7 cut(s)	218, 292, 656, 866, 977, 1070, 1148
AjnI	CCWGG	1 cut(s)	1290
AluBI	AGCT	3 cut(s)	1215, 1275, 1362
AluI	AGCT	3 cut(s)	1215, 1275, 1362
Alw21I	GWGCWC	2 cut(s)	102, 808
Alw26I	GTCTC	4 cut(s)	513, 875, 1150, 1252
Alw44I	GTGCAC	2 cut(s)	98, 804
AlwI	GGATC	3 cut(s)	402, 617, 630
Ama87I	CYCGRG	1 cut(s)	200
AoxI	GGCC	4 cut(s)	3, 869, 1107, 1336
ApaLI	GTGCAC	2 cut(s)	98, 804
ApeKI	GCWGC	8 cut(s)	32, 82, 85, 172, 589, 629, 1009, 1212
ApoI	RAATTY	4 cut(s)	294, 983, 1070, 1255
AspLEI	GCGC	1 cut(s)	232
AspS9I	GGNCC	1 cut(s)	551
AsuHPI	GGTGA	2 cut(s)	7, 1298
AsuII	TTCGAA	1 cut(s)	1074
AvaI	CYCGRG	1 cut(s)	200
AvaII	GGWCC	1 cut(s)	551
AxyI	CCTNAGG	1 cut(s)	342
BaeGI	GKGCMC	3 cut(s)	102, 460, 808
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	622
BanI	GGYRCC	2 cut(s)	529, 1228
BanII	GRGCYC	1 cut(s)	717
BbsI	GAAGAC	1 cut(s)	1083
Bbv12I	GWGCWC	2 cut(s)	102, 808
BbvCI	CCTCAGC	1 cut(s)	783
BbvI	GCAGC	8 cut(s)	19, 94, 97, 159, 601, 641, 1021, 1224
BccI	CCATC	4 cut(s)	134, 262, 778, 1274
BceAI	ACGGC	1 cut(s)	1315
BciT130I	CCWGG	1 cut(s)	1292
BcoDI	GTCTC	4 cut(s)	513, 875, 1150, 1252
BfaI	CTAG	2 cut(s)	150, 905
BfmI	CTRYAG	3 cut(s)	627, 774, 873
BfuAI	ACCTGC	2 cut(s)	583, 772
BisI	GCNGC	8 cut(s)	33, 83, 86, 173, 590, 630, 1010, 1213
BlsI	GCNGC	8 cut(s)	34, 84, 87, 174, 591, 631, 1011, 1214
BmcAI	AGTACT	2 cut(s)	65, 1400
Bme1390I	CCNGG	1 cut(s)	1292
Bme18I	GGWCC	1 cut(s)	551
BmeT110I	CYCGRG	1 cut(s)	200
BmgT120I	GGNCC	1 cut(s)	551
BmiI	GGNNCC	4 cut(s)	531, 624, 702, 1230
BmrFI	CCNGG	1 cut(s)	1292
BmsI	GCATC	4 cut(s)	418, 698, 857, 974
BpiI	GAAGAC	1 cut(s)	1083
BpmI	CTGGAG	1 cut(s)	231
Bpu10I	CCTNAGC	3 cut(s)	36, 474, 783
Bpu14I	TTCGAA	1 cut(s)	1074
BpuEI	CTTGAG	1 cut(s)	989
BsaBI	GATNNNNATC	1 cut(s)	393
BsaI	GGTCTC	1 cut(s)	1150
Bsc4I	CCNNNNNNNGG	1 cut(s)	1225
Bse118I	RCCGGY	1 cut(s)	1109
Bse1I	ACTGG	3 cut(s)	479, 554, 816
Bse21I	CCTNAGG	1 cut(s)	342
Bse3DI	GCAATG	1 cut(s)	843
Bse8I	GATNNNNATC	1 cut(s)	393
BseBI	CCWGG	1 cut(s)	1292
BseGI	GGATG	2 cut(s)	409, 1048
BseJI	GATNNNNATC	1 cut(s)	393
BseLI	CCNNNNNNNGG	1 cut(s)	1225
BseMI	GCAATG	1 cut(s)	843
BseMII	CTCAG	7 cut(s)	50, 356, 443, 465, 597, 797, 1386
BseNI	ACTGG	3 cut(s)	479, 554, 816
BseRI	GAGGAG	2 cut(s)	322, 1279
BseSI	GKGCMC	3 cut(s)	102, 460, 808
BseXI	GCAGC	8 cut(s)	19, 94, 97, 159, 601, 641, 1021, 1224
BseYI	CCCAGC	1 cut(s)	1127
BsgI	GTGCAG	2 cut(s)	681, 750
Bsh1236I	CGCG	1 cut(s)	747
BshFI	GGCC	4 cut(s)	5, 871, 1109, 1338
BshNI	GGYRCC	2 cut(s)	529, 1228
BsiHKAI	GWGCWC	2 cut(s)	102, 808
BsiHKCI	CYCGRG	1 cut(s)	200
BsiSI	CCGG	1 cut(s)	1110
BslFI	GGGAC	2 cut(s)	58, 167
BslI	CCNNNNNNNGG	1 cut(s)	1225
BsmAI	GTCTC	4 cut(s)	513, 875, 1150, 1252
BsmFI	GGGAC	2 cut(s)	58, 167
BsmI	GAATGC	2 cut(s)	174, 232
BsnI	GGCC	4 cut(s)	5, 871, 1109, 1338
Bso31I	GGTCTC	1 cut(s)	1150
BsoBI	CYCGRG	1 cut(s)	200
Bsp119I	TTCGAA	1 cut(s)	1074
Bsp1286I	GDGCHC	4 cut(s)	102, 460, 717, 808
Bsp1407I	TGTACA	1 cut(s)	673
Bsp143I	GATC	2 cut(s)	394, 622
BspACI	CCGC	2 cut(s)	159, 1153
BspANI	GGCC	4 cut(s)	5, 871, 1109, 1338
BspCNI	CTCAG	7 cut(s)	49, 355, 444, 466, 598, 796, 1387
BspFNI	CGCG	1 cut(s)	747
BspLI	GGNNCC	4 cut(s)	531, 624, 702, 1230
BspMAI	CTGCAG	1 cut(s)	631
BspMI	ACCTGC	2 cut(s)	583, 772
BspPI	GGATC	3 cut(s)	402, 617, 630
BspQI	GCTCTTC	1 cut(s)	1143
BspT104I	TTCGAA	1 cut(s)	1074
BspT107I	GGYRCC	2 cut(s)	529, 1228
BspTNI	GGTCTC	1 cut(s)	1150
BsrBI	CCGCTC	1 cut(s)	1153
BsrDI	GCAATG	1 cut(s)	843
BsrFI	RCCGGY	1 cut(s)	1109
BsrGI	TGTACA	1 cut(s)	673
BsrI	ACTGG	3 cut(s)	479, 554, 816
BssAI	RCCGGY	1 cut(s)	1109
BssMI	GATC	2 cut(s)	394, 622
BssNAI	GTATAC	1 cut(s)	1141
Bst1107I	GTATAC	1 cut(s)	1141
Bst2UI	CCWGG	1 cut(s)	1292
Bst4CI	ACNGT	3 cut(s)	187, 585, 647
Bst6I	CTCTTC	3 cut(s)	972, 1143, 1183
BstAPI	GCANNNNNTGC	1 cut(s)	586
BstAUI	TGTACA	1 cut(s)	673
BstBI	TTCGAA	1 cut(s)	1074
BstC8I	GCNNGC	1 cut(s)	687
BstDEI	CTNAG	7 cut(s)	36, 342, 452, 474, 606, 783, 1395
BstEII	GGTNACC	1 cut(s)	1286
BstF5I	GGATG	2 cut(s)	409, 1048
BstFNI	CGCG	1 cut(s)	747
BstHHI	GCGC	1 cut(s)	232
BstKTI	GATC	2 cut(s)	397, 625
BstMAI	GTCTC	4 cut(s)	513, 875, 1150, 1252
BstMBI	GATC	2 cut(s)	394, 622
BstMWI	GCNNNNNNNGC	7 cut(s)	82, 141, 586, 721, 812, 884, 1106
BstNI	CCWGG	1 cut(s)	1292
BstNSI	RCATGY	1 cut(s)	1084
BstPI	GGTNACC	1 cut(s)	1286
BstSCI	CCNGG	1 cut(s)	1290
BstSFI	CTRYAG	3 cut(s)	627, 774, 873
BstSLI	GKGCMC	3 cut(s)	102, 460, 808
BstUI	CGCG	1 cut(s)	747
BstV1I	GCAGC	8 cut(s)	19, 94, 97, 159, 601, 641, 1021, 1224
BstV2I	GAAGAC	1 cut(s)	1083
BstX2I	RGATCY	1 cut(s)	622
BstYI	RGATCY	1 cut(s)	622
BstZ17I	GTATAC	1 cut(s)	1141
Bsu36I	CCTNAGG	1 cut(s)	342
BsuRI	GGCC	4 cut(s)	5, 871, 1109, 1338
BtsCI	GGATG	2 cut(s)	409, 1048
BtsI	GCAGTG	3 cut(s)	27, 423, 669
BtsIMutI	CAGTG	5 cut(s)	27, 423, 486, 669, 809
BveI	ACCTGC	2 cut(s)	583, 772
Cac8I	GCNNGC	1 cut(s)	687
CfoI	GCGC	1 cut(s)	232
Cfr10I	RCCGGY	1 cut(s)	1109
Cfr13I	GGNCC	1 cut(s)	551
CseI	GACGC	1 cut(s)	971
Csp6I	GTAC	5 cut(s)	64, 362, 674, 938, 1399
CviAII	CATG	2 cut(s)	616, 1081
CviQI	GTAC	5 cut(s)	64, 362, 674, 938, 1399
DdeI	CTNAG	7 cut(s)	36, 342, 452, 474, 606, 783, 1395
DpnI	GATC	2 cut(s)	396, 624
DpnII	GATC	2 cut(s)	394, 622
EaeI	YGGCCR	2 cut(s)	3, 1336
Eam1104I	CTCTTC	3 cut(s)	972, 1143, 1183
EarI	CTCTTC	3 cut(s)	972, 1143, 1183
Eco147I	AGGCCT	1 cut(s)	871
Eco24I	GRGCYC	1 cut(s)	717
Eco31I	GGTCTC	1 cut(s)	1150
Eco47I	GGWCC	1 cut(s)	551
Eco57I	CTGAAG	5 cut(s)	62, 774, 801, 990, 1035
Eco81I	CCTNAGG	1 cut(s)	342
Eco88I	CYCGRG	1 cut(s)	200
Eco91I	GGTNACC	1 cut(s)	1286
EcoO65I	GGTNACC	1 cut(s)	1286
EcoRI	GAATTC	1 cut(s)	1070
EcoRII	CCWGG	1 cut(s)	1290
EcoT22I	ATGCAT	1 cut(s)	1063
EcoT38I	GRGCYC	1 cut(s)	717
FaeI	CATG	2 cut(s)	619, 1084
FaqI	GGGAC	2 cut(s)	58, 167
FatI	CATG	2 cut(s)	615, 1080
FblI	GTMKAC	1 cut(s)	1140
Fnu4HI	GCNGC	8 cut(s)	33, 83, 86, 173, 590, 630, 1010, 1213
FokI	GGATG	2 cut(s)	396, 1055
FriOI	GRGCYC	1 cut(s)	717
Fsp4HI	GCNGC	8 cut(s)	33, 83, 86, 173, 590, 630, 1010, 1213
FspBI	CTAG	2 cut(s)	150, 905
GlaI	GCGC	1 cut(s)	231
GluI	GCNGC	8 cut(s)	33, 83, 86, 173, 590, 630, 1010, 1213
GsaI	CCCAGC	1 cut(s)	1131
GsuI	CTGGAG	1 cut(s)	231
HaeIII	GGCC	4 cut(s)	5, 871, 1109, 1338
HapII	CCGG	1 cut(s)	1110
HgaI	GACGC	1 cut(s)	971
HhaI	GCGC	1 cut(s)	232
Hin1II	CATG	2 cut(s)	619, 1084
Hin6I	GCGC	1 cut(s)	230
HinP1I	GCGC	1 cut(s)	230
HincII	GTYRAC	2 cut(s)	559, 796
HindII	GTYRAC	2 cut(s)	559, 796
HinfI	GANTC	6 cut(s)	116, 242, 443, 602, 1033, 1320
HpaI	GTTAAC	1 cut(s)	796
HpaII	CCGG	1 cut(s)	1110
HphI	GGTGA	2 cut(s)	7, 1298
Hpy166II	GTNNAC	6 cut(s)	100, 559, 796, 806, 961, 1141
Hpy188I	TCNGA	9 cut(s)	115, 324, 607, 820, 970, 1122, 1225, 1254, 1396
Hpy188III	TCNNGA	8 cut(s)	165, 210, 223, 344, 440, 473, 1179, 1374
Hpy8I	GTNNAC	6 cut(s)	100, 559, 796, 806, 961, 1141
HpyAV	CCTTC	5 cut(s)	22, 798, 1010, 1188, 1200
HpyCH4III	ACNGT	3 cut(s)	187, 585, 647
HpyCH4IV	ACGT	1 cut(s)	957
HpyF10VI	GCNNNNNNNGC	7 cut(s)	82, 141, 586, 721, 812, 884, 1106
HpyF3I	CTNAG	7 cut(s)	36, 342, 452, 474, 606, 783, 1395
HpySE526I	ACGT	1 cut(s)	957
Hsp92II	CATG	2 cut(s)	619, 1084
HspAI	GCGC	1 cut(s)	230
KspAI	GTTAAC	1 cut(s)	796
Kzo9I	GATC	2 cut(s)	394, 622
LguI	GCTCTTC	1 cut(s)	1143
Lsp1109I	GCAGC	8 cut(s)	19, 94, 97, 159, 601, 641, 1021, 1224
LweI	GCATC	4 cut(s)	418, 698, 857, 974
MaeI	CTAG	2 cut(s)	150, 905
MaeII	ACGT	1 cut(s)	957
MaeIII	GTNAC	3 cut(s)	25, 195, 1286
MalI	GATC	2 cut(s)	396, 624
MbiI	CCGCTC	1 cut(s)	1153
MboI	GATC	2 cut(s)	394, 622
MboII	GAAGA	6 cut(s)	920, 926, 989, 1088, 1160, 1200
MflI	RGATCY	1 cut(s)	622
MhlI	GDGCHC	4 cut(s)	102, 460, 717, 808
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	9 cut(s)	104, 294, 468, 487, 635, 983, 991, 1070, 1255
MluI	ACGCGT	1 cut(s)	745
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	437, 1042
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	1063
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	4 cut(s)	366, 540, 795, 990
Msp20I	TGGCCA	1 cut(s)	5
MspI	CCGG	1 cut(s)	1110
MspR9I	CCNGG	1 cut(s)	1292
Mva1269I	GAATGC	2 cut(s)	174, 232
MvaI	CCWGG	1 cut(s)	1292
MvnI	CGCG	1 cut(s)	747
MwoI	GCNNNNNNNGC	7 cut(s)	82, 141, 586, 721, 812, 884, 1106
NdeII	GATC	2 cut(s)	394, 622
NlaIII	CATG	2 cut(s)	619, 1084
NlaIV	GGNNCC	4 cut(s)	531, 624, 702, 1230
NmuCI	GTSAC	3 cut(s)	25, 195, 1286
NsiI	ATGCAT	1 cut(s)	1063
NspI	RCATGY	1 cut(s)	1084
NspV	TTCGAA	1 cut(s)	1074
PceI	AGGCCT	1 cut(s)	871
PciI	ACATGT	1 cut(s)	1080
PciSI	GCTCTTC	1 cut(s)	1143
PctI	GAATGC	2 cut(s)	174, 232
PfeI	GAWTC	4 cut(s)	116, 242, 602, 1320
PkrI	GCNGC	8 cut(s)	34, 84, 87, 174, 591, 631, 1011, 1214
PleI	GAGTC	2 cut(s)	437, 1041
PpsI	GAGTC	2 cut(s)	437, 1041
PscI	ACATGT	1 cut(s)	1080
Psp6I	CCWGG	1 cut(s)	1290
PspEI	GGTNACC	1 cut(s)	1286
PspFI	CCCAGC	1 cut(s)	1127
PspGI	CCWGG	1 cut(s)	1290
PspN4I	GGNNCC	4 cut(s)	531, 624, 702, 1230
PspPI	GGNCC	1 cut(s)	551
PstI	CTGCAG	1 cut(s)	631
PsuI	RGATCY	1 cut(s)	622
RsaI	GTAC	5 cut(s)	65, 363, 675, 939, 1400
RsaNI	GTAC	5 cut(s)	64, 362, 674, 938, 1399
SapI	GCTCTTC	1 cut(s)	1143
SaqAI	TTAA	4 cut(s)	366, 540, 795, 990
SatI	GCNGC	8 cut(s)	33, 83, 86, 173, 590, 630, 1010, 1213
Sau3AI	GATC	2 cut(s)	394, 622
Sau96I	GGNCC	1 cut(s)	551
ScaI	AGTACT	2 cut(s)	65, 1400
SchI	GAGTC	2 cut(s)	437, 1042
ScrFI	CCNGG	1 cut(s)	1292
SduI	GDGCHC	4 cut(s)	102, 460, 717, 808
SfaNI	GCATC	4 cut(s)	418, 698, 857, 974
SfcI	CTRYAG	3 cut(s)	627, 774, 873
SfuI	TTCGAA	1 cut(s)	1074
SinI	GGWCC	1 cut(s)	551
SmlI	CTYRAG	1 cut(s)	1004
SmoI	CTYRAG	1 cut(s)	1004
Sse9I	AATT	9 cut(s)	104, 294, 468, 487, 635, 983, 991, 1070, 1255
SseBI	AGGCCT	1 cut(s)	871
SsiI	CCGC	2 cut(s)	159, 1153
SspI	AATATT	1 cut(s)	1388
SspMI	CTAG	2 cut(s)	150, 905
StuI	AGGCCT	1 cut(s)	871
StyD4I	CCNGG	1 cut(s)	1290
TaaI	ACNGT	3 cut(s)	187, 585, 647
TaiI	ACGT	1 cut(s)	960
TaqI	TCGA	3 cut(s)	600, 1074, 1180
TasI	AATT	9 cut(s)	104, 294, 468, 487, 635, 983, 991, 1070, 1255
TatI	WGTACW	4 cut(s)	63, 361, 673, 1398
TfiI	GAWTC	4 cut(s)	116, 242, 602, 1320
Tru1I	TTAA	4 cut(s)	366, 540, 795, 990
Tru9I	TTAA	4 cut(s)	366, 540, 795, 990
TscAI	CASTG	5 cut(s)	34, 423, 486, 669, 816
TseFI	GTSAC	3 cut(s)	25, 195, 1286
TseI	GCWGC	8 cut(s)	32, 82, 85, 172, 589, 629, 1009, 1212
Tsp45I	GTSAC	3 cut(s)	25, 195, 1286
TspDTI	ATGAA	7 cut(s)	373, 392, 639, 906, 927, 933, 1380
TspGWI	ACGGA	1 cut(s)	919
TspRI	CASTG	5 cut(s)	34, 423, 486, 669, 816
VneI	GTGCAC	2 cut(s)	98, 804
VpaK11BI	GGWCC	1 cut(s)	551
XapI	RAATTY	4 cut(s)	294, 983, 1070, 1255
XceI	RCATGY	1 cut(s)	1084
XcmI	CCANNNNNNNNNTGG	1 cut(s)	523
XmiI	GTMKAC	1 cut(s)	1140
XspI	CTAG	2 cut(s)	150, 905
ZrmI	AGTACT	2 cut(s)	65, 1400
Zsp2I	ATGCAT	1 cut(s)	1063

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.