Eukaryotic aspartyl protease
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0404551 |
| rosa_roxburghii | Rroxscaffold_3G00255500 |
| rosa_rugosa | Rorug05G0202500 |
| rosa_samantha | Rh2DG252600 Rh2DG252800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 46 |
| AciI | CCGC | 1 cut(s) | 27 |
| AclWI | GGATC | 1 cut(s) | 237 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 56 |
| AflIII | ACRYGT | 1 cut(s) | 36 |
| AgsI | TTSAA | 1 cut(s) | 230 |
| AlwI | GGATC | 1 cut(s) | 237 |
| ApeKI | GCWGC | 2 cut(s) | 114, 219 |
| AspLEI | GCGC | 1 cut(s) | 19 |
| AsuII | TTCGAA | 1 cut(s) | 268 |
| BanI | GGYRCC | 1 cut(s) | 46 |
| BbvI | GCAGC | 2 cut(s) | 101, 206 |
| BfaI | CTAG | 2 cut(s) | 105, 162 |
| BfmI | CTRYAG | 1 cut(s) | 188 |
| BfoI | RGCGCY | 1 cut(s) | 20 |
| BisI | GCNGC | 2 cut(s) | 115, 220 |
| BlsI | GCNGC | 2 cut(s) | 116, 221 |
| BmiI | GGNNCC | 1 cut(s) | 48 |
| Bpu14I | TTCGAA | 1 cut(s) | 268 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 56 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 56 |
| BseXI | GCAGC | 2 cut(s) | 101, 206 |
| BshNI | GGYRCC | 1 cut(s) | 46 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 56 |
| Bsp119I | TTCGAA | 1 cut(s) | 268 |
| Bsp143I | GATC | 1 cut(s) | 242 |
| BspACI | CCGC | 1 cut(s) | 27 |
| BspLI | GGNNCC | 1 cut(s) | 48 |
| BspMAI | CTGCAG | 1 cut(s) | 192 |
| BspPI | GGATC | 1 cut(s) | 237 |
| BspT104I | TTCGAA | 1 cut(s) | 268 |
| BspT107I | GGYRCC | 1 cut(s) | 46 |
| BssMI | GATC | 1 cut(s) | 242 |
| BstBI | TTCGAA | 1 cut(s) | 268 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 54 |
| BstH2I | RGCGCY | 1 cut(s) | 20 |
| BstHHI | GCGC | 1 cut(s) | 19 |
| BstKTI | GATC | 1 cut(s) | 245 |
| BstMBI | GATC | 1 cut(s) | 242 |
| BstNSI | RCATGY | 1 cut(s) | 40 |
| BstSFI | CTRYAG | 1 cut(s) | 188 |
| BstV1I | GCAGC | 2 cut(s) | 101, 206 |
| CfoI | GCGC | 1 cut(s) | 19 |
| CviAII | CATG | 1 cut(s) | 37 |
| CviJI | RGCY | 2 cut(s) | 182, 219 |
| CviKI_1 | RGCY | 2 cut(s) | 182, 219 |
| DpnI | GATC | 1 cut(s) | 244 |
| DpnII | GATC | 1 cut(s) | 242 |
| Eco32I | GATATC | 1 cut(s) | 153 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 54 |
| EcoRV | GATATC | 1 cut(s) | 153 |
| FaeI | CATG | 1 cut(s) | 40 |
| FaiI | YATR | 5 cut(s) | 11, 38, 69, 143, 295 |
| FatI | CATG | 1 cut(s) | 36 |
| FauI | CCCGC | 1 cut(s) | 20 |
| Fnu4HI | GCNGC | 2 cut(s) | 115, 220 |
| Fsp4HI | GCNGC | 2 cut(s) | 115, 220 |
| FspBI | CTAG | 2 cut(s) | 105, 162 |
| GlaI | GCGC | 1 cut(s) | 18 |
| GluI | GCNGC | 2 cut(s) | 115, 220 |
| HaeII | RGCGCY | 1 cut(s) | 20 |
| HhaI | GCGC | 1 cut(s) | 19 |
| Hin1II | CATG | 1 cut(s) | 40 |
| Hin6I | GCGC | 1 cut(s) | 17 |
| HinP1I | GCGC | 1 cut(s) | 17 |
| Hpy166II | GTNNAC | 1 cut(s) | 81 |
| Hpy8I | GTNNAC | 1 cut(s) | 81 |
| HpyAV | CCTTC | 3 cut(s) | 50, 172, 256 |
| HpyCH4V | TGCA | 2 cut(s) | 89, 190 |
| Hsp92II | CATG | 1 cut(s) | 40 |
| HspAI | GCGC | 1 cut(s) | 17 |
| Kzo9I | GATC | 1 cut(s) | 242 |
| LpnPI | CCDG | 2 cut(s) | 69, 159 |
| Lsp1109I | GCAGC | 2 cut(s) | 101, 206 |
| MaeI | CTAG | 2 cut(s) | 105, 162 |
| MaeIII | GTNAC | 1 cut(s) | 32 |
| MalI | GATC | 1 cut(s) | 244 |
| MboI | GATC | 1 cut(s) | 242 |
| MboII | GAAGA | 1 cut(s) | 160 |
| MluCI | AATT | 4 cut(s) | 60, 205, 230, 270 |
| MnlI | CCTC | 1 cut(s) | 212 |
| NdeII | GATC | 1 cut(s) | 242 |
| NlaIII | CATG | 1 cut(s) | 40 |
| NlaIV | GGNNCC | 1 cut(s) | 48 |
| NmuCI | GTSAC | 1 cut(s) | 32 |
| NspI | RCATGY | 1 cut(s) | 40 |
| NspV | TTCGAA | 1 cut(s) | 268 |
| PciI | ACATGT | 1 cut(s) | 36 |
| PkrI | GCNGC | 2 cut(s) | 116, 221 |
| PscI | ACATGT | 1 cut(s) | 36 |
| PspN4I | GGNNCC | 1 cut(s) | 48 |
| PstI | CTGCAG | 1 cut(s) | 192 |
| SatI | GCNGC | 2 cut(s) | 115, 220 |
| Sau3AI | GATC | 1 cut(s) | 242 |
| SetI | ASST | 2 cut(s) | 88, 204 |
| SfcI | CTRYAG | 1 cut(s) | 188 |
| SfuI | TTCGAA | 1 cut(s) | 268 |
| Sse9I | AATT | 4 cut(s) | 60, 205, 230, 270 |
| SsiI | CCGC | 1 cut(s) | 27 |
| SspMI | CTAG | 2 cut(s) | 105, 162 |
| TaqI | TCGA | 2 cut(s) | 241, 268 |
| TasI | AATT | 4 cut(s) | 60, 205, 230, 270 |
| TseFI | GTSAC | 1 cut(s) | 32 |
| TseI | GCWGC | 2 cut(s) | 114, 219 |
| Tsp45I | GTSAC | 1 cut(s) | 32 |
| TspDTI | ATGAA | 2 cut(s) | 17, 88 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 54 |
| XceI | RCATGY | 1 cut(s) | 40 |
| XspI | CTAG | 2 cut(s) | 105, 162 |