RchiOBHm_Chr4g0406691

Serine threonine-protein kinase-like protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
28468391 .. 28471923
3533 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37799

Sequence Viewer

Length: 2685 bp
ATGGTGGTTTCTTTAGGAGGTTTACTGATCTGGGTCCTTAATATCAACAACACACAGAGAGCTGGAATTCTTGTTCACCTAGTAGCTTTATCAAATTTATGGTGTTTAGTTTCAGGACTAGGTTCTATGTCCTCCGTTGCAGTTTCTTATGGTGAGAAAGGTGCAGTTTACTGTGGCTTAAACTTGAATGGGTCTAATCTTGTGAGCTGTTATGGATCAAACTCGGCCATAACATATGGAACCCCAATTCACTTCCCATTTATTGGTCTGACTGCTGGTGATGGCTTTGTTTGTGGTCTGCTCATGGATTCTAACCAACCATATTGTTGGGGCAGCAGTGGTTATATTCAAATGGGTGTCCCTCAACCCATTATTAAAGATGCCCAATATGTAGAAATCAGTGCTGGTGATTACCATCTCTGTGGATTGAGAAAATCTCTAACAGGGAGCCTCAGAAACATGTCTTTTGTCGATTGTTGGGGCTATAACATGACCAAAAACTATGTGTTTGATGGTCAGATGCAGTCCATTACAGCAGGGTCAGAATTCAATTGTGGATTGTTTTCCCAAAACAGGACTGTGTTTTGCTGGGGTGATGAGACTAGTAGTAGGGTTATCCATTTGATCCCCGCAGACATGAGGTTTCGGATGATTGCAGCTGGTGGGTATCATGTCTGTGGCATTTCAGAGGGTGTGAGTTCTAGAACCTTTTGTTGGGGAAGAAGCTTGGACATTGAAGAAGAAATCTCAGTGGCATATTCGGGTCAAGGCAATGTTGATTTGGCTCCGAAGGACCCAATGCTTTCAATTGTGGGAGGGAAGTTTCATGCCTGCGGAATCAAGAGCTATGACCATGGTGTCATCTGCTGGGGATTTATTATGAAGCCAAGCACACCGGTTCCCAAGGGTGTCAAGGTTTATGACATTGCTGCTGGAAATTACTTCACCTGTGGGATTCGTGCTGACAAATCATTCTTGCCTGTTTGTTGGGGTCTTGGATTTCCGACTTCTCTTCCATTACCTGTTCCCCCCAGGTCCTGCATCTCTACTCCATGTGCTCCTGGCTTCTATGAACTCAGCCATGACAGTGCCTCTTGCAAAGATCCCAACTCTCACATTTGCATGCCCTGCAGCACTGGCTGTCCTGCTGAAATGTACCAAAAAACTGAATGTACGTTGAAATCTGATAGACAGTGTGATTATAACTGTTCTATTTGTTCCTCAGCTGGATGCTCCTCAAACTGTTCTTCATTGTACGCCAATTCAAAGAGGAACGAAAGGTTCTGGTCTCTGCAATTACCTGTCATTATTGCTGAGATTGCCTTTGCTATGATATTGGTCAGTGTTGTGTCTCTAACTGCAGTTTTATATGTCCGCTACAAGTTACGTGACTGTCGTTGCACAGAAAAATACTTAAAGTCTACAAAGAATGGTCGCAGTGGTTCGACTTTCCAGAAAGACATTGGCAAGATTCGTCCAGACTTGGATGATCTGAAGATAAGGCGGGCTCAGATGTTTACTTATAAGGAACTGGAAAGAGCAACTTCGGGGTTTGAAGAAGAGTCTGTTGTGGGCAAGGGAAGCTTCTCCTCAGTTTTTAGAGGTGTTTTGAAAGATGGAACAGTTGTGGCTGTCAAAAGGGCTATAATATTAAACCATGCTCATTTACTCAACCTTCTTGGCTATTGTGAAGAAGGTGGAGAGAGGCTTCTTGTGTACGAGTTCATGGCTCATGGATCATTGCACCAGCACCTCCATGGAAAGAACAAAGCCTTGAGAGAGCAATTGGACTGGGTTCGAAGAGTCACAATTGCAGTCCAGGCAGCTAGGGGAATTGAATACTTGCATGGTTACGCTTGCCCACCAGTGATCCATCGAGATATTAAGTCTTCTAATATCTTGATCGATGAGGAACACAATGCTAGAGTAGCTGATTTTGGCTTGTCACTATTGGGACCTGCAGATAGTAGTTCCCCACTGGCCGAGCTACCAGCGGGAACTCTAGGGTATCTTGATCCTGAGTACTACAGACTTCACTACCTGACAACCAAATCTGATGTTTATAGTTTTGGTGTTTTGCTGTTGGAGATTCTTAGTGGCAGAAAAGCCATTGATATGCAATATGAAGAATCAGGAAATATAGTTGAATGGGCAGTGCCTCTGATCAAGGCAGGAGACATATTTGCAATTTTGGATCCACTTTTGAAACCCCCACCTGATGTTGAGGCCTTGAAAAGAATTGCAAATGTTGCTTGCAAATGTGTGAGGATGAGAGGCAAGGAGAGGCCGTCAATGGATAAAGTGACTACAGCACTTGAACGAGCTCTTGCGCTGCTAATGGGCAGCCCCTGTAATGAGCAACCCATTCTGCCTACTGAGGTGGTATTGGGAAGCAGTAGATTGCACAAGAAGTCATCGCAGAGATCTTCAAACAGGTCAGTGGAAACTGATGTTATAGATGCCGAGGATCAGAGGTTTGAATTCAGAGCTCCTTCATGGATCACATTTCCGAGTGTTGCTTCTTCCCAGAGGAGGAAATCCTCGGTCTCAGATGCCGATGCTGATGGGAAGAGCTCCATGGAAGCTAGAAATATGGGGAATGGTGGTGATGGGTTGAGGAGTTTGGAGGAAGAGATTGGGCCAGCTTCACCTCGAGAGAAGCTATTCTTGCAGCATAATTTTTAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

894

Amino Acids

98.0

Weight (kDa)

7.42

Isoelectric Point (pI)

47.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TNFR_c6 PF00020 352 - 399 8.7e-06 TNFR/NGFR cysteine-rich region
PK_Tyr_Ser-Thr PF07714 551 - 771 1.6e-33 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 551 - 768 4.4e-30 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G59420
fragaria_vesca FvH4_4g10810
malus_domestica MD04G1040500.v1.1
prunus_persica Prupe.1G194300_v2.0.a1
pyrus_communis pycom04g03540
rosa_chinensis RchiOBHm_Chr4g0406691
rosa_laevigata RLG00000008760
rosa_multiflora Rmu_sc0017281.1_g000002
rosa_roxburghii Rroxscaffold_5G00351530
rosa_rugosa Rorug04G0072900
rosa_samantha Rh4AG140300 Rh4BG137300 Rh4CG147200 Rh4DG134300
rosa_wichuraiana Rw4G011430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1203, 1524
AasI GACNNNNNNGTC 1 cut(s) 857
Acc36I ACCTGC 1 cut(s) 1966
AccB7I CCANNNNNTGG 1 cut(s) 263
AccI GTMKAC 1 cut(s) 1421
AciI CCGC 5 cut(s) 630, 834, 1375, 1504, 1994
AcoI YGGCCR 2 cut(s) 225, 1980
AcsI RAATTY 4 cut(s) 66, 94, 545, 2480
AcuI CTGAAG 1 cut(s) 1514
AfaI GTAC 5 cut(s) 1157, 1174, 1256, 1718, 2024
AfiI CCNNNNNNNGG 4 cut(s) 263, 573, 714, 2532
AflIII ACRYGT 1 cut(s) 459
AgeI ACCGGT 1 cut(s) 895
AhlI ACTAGT 1 cut(s) 602
AjnI CCWGG 3 cut(s) 1031, 1060, 1818
AjuI GAANNNNNNNTTGG 2 cut(s) 697, 729
AloI GAACNNNNNNTCC 2 cut(s) 57, 89
Alw21I GWGCWC 4 cut(s) 1060, 2326, 2491, 2576
Alw26I GTCTC 5 cut(s) 593, 1293, 1356, 2169, 2551
AlwNI CAGNNNCTG 2 cut(s) 1038, 2349
Ama87I CYCGRG 1 cut(s) 2652
AoxI GGCC 5 cut(s) 225, 1980, 2226, 2285, 2639
ApeKI GCWGC 8 cut(s) 333, 656, 929, 1131, 1823, 2332, 2343, 2671
ApoI RAATTY 4 cut(s) 66, 94, 545, 2480
AsiGI ACCGGT 1 cut(s) 895
Asp700I GAANNNNTTC 1 cut(s) 2663
AspLEI GCGC 1 cut(s) 2332
AspS9I GGNCC 5 cut(s) 34, 793, 1035, 1955, 2639
AsuHPI GGTGA 8 cut(s) 68, 164, 290, 419, 605, 937, 2618, 2640
AsuII TTCGAA 1 cut(s) 1798
AvaI CYCGRG 1 cut(s) 2652
AvaII GGWCC 4 cut(s) 34, 793, 1035, 1955
BamHI GGATCC 1 cut(s) 2194
BanII GRGCYC 4 cut(s) 1510, 2326, 2491, 2576
BbsI GAAGAC 1 cut(s) 1881
Bbv12I GWGCWC 4 cut(s) 1060, 2326, 2491, 2576
BbvCI CCTCAGC 1 cut(s) 1222
BbvI GCAGC 7 cut(s) 345, 668, 916, 1143, 1835, 2319, 2355
BccI CCATC 7 cut(s) 275, 423, 506, 1610, 1881, 2558, 2603
BceAI ACGGC 1 cut(s) 2272
BciT130I CCWGG 3 cut(s) 1033, 1062, 1820
BclI TGATCA 1 cut(s) 2163
BcoDI GTCTC 5 cut(s) 593, 1293, 1356, 2169, 2551
BcuI ACTAGT 1 cut(s) 602
BfaI CTAG 8 cut(s) 80, 119, 603, 702, 1827, 1923, 2003, 2586
BfmI CTRYAG 5 cut(s) 1129, 1359, 1959, 2026, 2307
BfuAI ACCTGC 1 cut(s) 1966
BglII AGATCT 1 cut(s) 2423
BisI GCNGC 8 cut(s) 334, 657, 930, 1132, 1824, 2333, 2344, 2672
BlsI GCNGC 8 cut(s) 335, 658, 931, 1133, 1825, 2334, 2345, 2673
BmcAI AGTACT 1 cut(s) 2024
Bme1390I CCNGG 3 cut(s) 1033, 1062, 1820
Bme18I GGWCC 4 cut(s) 34, 793, 1035, 1955
BmeT110I CYCGRG 1 cut(s) 2652
BmgT120I GGNCC 5 cut(s) 34, 793, 1035, 1955, 2639
BmiI GGNNCC 8 cut(s) 35, 241, 449, 786, 795, 900, 1956, 2196
BmrFI CCNGG 3 cut(s) 1033, 1062, 1820
BmrI ACTGGG 1 cut(s) 1801
BmsI GCATC 7 cut(s) 370, 510, 1050, 1220, 2449, 2542, 2548
BmuI ACTGGG 1 cut(s) 1801
BpiI GAAGAC 1 cut(s) 1881
BplI GAGNNNNNCTC 2 cut(s) 421, 453
Bpu10I CCTNAGC 1 cut(s) 1222
Bpu14I TTCGAA 1 cut(s) 1798
BpuEI CTTGAG 1 cut(s) 1795
Bsa29I ATCGAT 1 cut(s) 1905
BsaAI YACGTR 1 cut(s) 1388
BsaBI GATNNNNATC 1 cut(s) 414
BsaI GGTCTC 2 cut(s) 1293, 2551
BsaJI CCNNGG 7 cut(s) 853, 903, 1031, 1756, 2463, 2541, 2577
BsaWI WCCGGW 1 cut(s) 895
BsaXI ACNNNNNCTCC 2 cut(s) 2273, 2303
Bsc4I CCNNNNNNNGG 4 cut(s) 263, 573, 714, 2532
Bse118I RCCGGY 1 cut(s) 895
Bse1I ACTGG 5 cut(s) 1141, 1536, 1796, 1865, 1983
Bse3DI GCAATG 3 cut(s) 778, 924, 1739
Bse8I GATNNNNATC 1 cut(s) 414
BseBI CCWGG 3 cut(s) 1033, 1062, 1820
BseCI ATCGAT 1 cut(s) 1905
BseDI CCNNGG 7 cut(s) 853, 903, 1031, 1756, 2463, 2541, 2577
BseGI GGATG 4 cut(s) 654, 1235, 1492, 2274
BseJI GATNNNNATC 1 cut(s) 414
BseLI CCNNNNNNNGG 4 cut(s) 263, 573, 714, 2532
BseMI GCAATG 3 cut(s) 778, 924, 1739
BseNI ACTGG 5 cut(s) 1141, 1536, 1796, 1865, 1983
BseRI GAGGAG 4 cut(s) 1225, 1579, 2545, 2632
BseXI GCAGC 7 cut(s) 345, 668, 916, 1143, 1835, 2319, 2355
BseYI CCCAGC 2 cut(s) 588, 867
BsgI GTGCAG 1 cut(s) 183
BshFI GGCC 5 cut(s) 227, 1982, 2228, 2287, 2641
BshTI ACCGGT 1 cut(s) 895
BshVI ATCGAT 1 cut(s) 1905
BsiHKAI GWGCWC 4 cut(s) 1060, 2326, 2491, 2576
BsiHKCI CYCGRG 1 cut(s) 2652
BsiSI CCGG 1 cut(s) 896
BslFI GGGAC 2 cut(s) 344, 1968
BslI CCNNNNNNNGG 4 cut(s) 263, 573, 714, 2532
BsmAI GTCTC 5 cut(s) 593, 1293, 1356, 2169, 2551
BsmFI GGGAC 2 cut(s) 344, 1968
BsnI GGCC 5 cut(s) 227, 1982, 2228, 2287, 2641
Bso31I GGTCTC 2 cut(s) 1293, 2551
BsoBI CYCGRG 1 cut(s) 2652
Bsp119I TTCGAA 1 cut(s) 1798
Bsp1286I GDGCHC 5 cut(s) 1060, 1510, 2326, 2491, 2576
Bsp19I CCATGG 3 cut(s) 853, 1756, 2577
BspACI CCGC 5 cut(s) 630, 834, 1375, 1504, 1994
BspANI GGCC 5 cut(s) 227, 1982, 2228, 2287, 2641
BspDI ATCGAT 1 cut(s) 1905
BspLI GGNNCC 8 cut(s) 35, 241, 449, 786, 795, 900, 1956, 2196
BspMAI CTGCAG 3 cut(s) 1133, 1363, 1963
BspMI ACCTGC 1 cut(s) 1966
BspQI GCTCTTC 1 cut(s) 2564
BspT104I TTCGAA 1 cut(s) 1798
BspTNI GGTCTC 2 cut(s) 1293, 2551
BsrDI GCAATG 3 cut(s) 778, 924, 1739
BsrFI RCCGGY 1 cut(s) 895
BsrI ACTGG 5 cut(s) 1141, 1536, 1796, 1865, 1983
BssAI RCCGGY 1 cut(s) 895
BssECI CCNNGG 7 cut(s) 853, 903, 1031, 1756, 2463, 2541, 2577
BssT1I CCWWGG 4 cut(s) 853, 903, 1756, 2577
Bst2UI CCWGG 3 cut(s) 1033, 1062, 1820
Bst4CI ACNGT 8 cut(s) 173, 580, 1088, 1194, 1208, 1244, 1394, 1624
Bst6I CTCTTC 5 cut(s) 1017, 1554, 1795, 2564, 2625
BstAPI GCANNNNNTGC 2 cut(s) 1128, 2249
BstBAI YACGTR 1 cut(s) 1388
BstBI TTCGAA 1 cut(s) 1798
BstC8I GCNNGC 6 cut(s) 832, 1124, 1506, 1858, 2254, 2643
BstDSI CCRYGG 3 cut(s) 853, 1756, 2577
BstF5I GGATG 4 cut(s) 654, 1235, 1492, 2274
BstHHI GCGC 1 cut(s) 2332
BstMAI GTCTC 5 cut(s) 593, 1293, 1356, 2169, 2551
BstMWI GCNNNNNNNGC 8 cut(s) 1128, 1137, 1319, 1581, 1820, 1928, 2249, 2668
BstNI CCWGG 3 cut(s) 1033, 1062, 1820
BstNSI RCATGY 2 cut(s) 463, 1126
BstSCI CCNGG 3 cut(s) 1031, 1060, 1818
BstSFI CTRYAG 5 cut(s) 1129, 1359, 1959, 2026, 2307
BstV1I GCAGC 7 cut(s) 345, 668, 916, 1143, 1835, 2319, 2355
BstV2I GAAGAC 1 cut(s) 1881
BstX2I RGATCY 3 cut(s) 1102, 2194, 2423
BstXI CCANNNNNNTGG 2 cut(s) 327, 422
BstYI RGATCY 3 cut(s) 1102, 2194, 2423
Bsu15I ATCGAT 1 cut(s) 1905
BsuRI GGCC 5 cut(s) 227, 1982, 2228, 2287, 2641
BsuTUI ATCGAT 1 cut(s) 1905
BtgI CCRYGG 3 cut(s) 853, 1756, 2577
BtgZI GCGATG 1 cut(s) 2400
BtsCI GGATG 4 cut(s) 654, 1235, 1492, 2274
BtsI GCAGTG 3 cut(s) 343, 1444, 2160
BveI ACCTGC 1 cut(s) 1966
Cac8I GCNNGC 6 cut(s) 832, 1124, 1506, 1858, 2254, 2643
CaiI CAGNNNCTG 2 cut(s) 1038, 2349
CfoI GCGC 1 cut(s) 2332
Cfr10I RCCGGY 1 cut(s) 895
Cfr13I GGNCC 5 cut(s) 34, 793, 1035, 1955, 2639
ClaI ATCGAT 1 cut(s) 1905
Csp6I GTAC 5 cut(s) 1156, 1173, 1255, 1717, 2023
CspAI ACCGGT 1 cut(s) 895
CviQI GTAC 5 cut(s) 1156, 1173, 1255, 1717, 2023
DrdI GACNNNNNNGTC 1 cut(s) 857
DseDI GACNNNNNNGTC 1 cut(s) 857
EaeI YGGCCR 2 cut(s) 225, 1980
Eam1104I CTCTTC 5 cut(s) 1017, 1554, 1795, 2564, 2625
EarI CTCTTC 5 cut(s) 1017, 1554, 1795, 2564, 2625
Ecl136II GAGCTC 3 cut(s) 2324, 2489, 2574
Eco130I CCWWGG 4 cut(s) 853, 903, 1756, 2577
Eco147I AGGCCT 1 cut(s) 2228
Eco24I GRGCYC 4 cut(s) 1510, 2326, 2491, 2576
Eco31I GGTCTC 2 cut(s) 1293, 2551
Eco47I GGWCC 4 cut(s) 34, 793, 1035, 1955
Eco53kI GAGCTC 3 cut(s) 2324, 2489, 2574
Eco57I CTGAAG 1 cut(s) 1514
Eco88I CYCGRG 1 cut(s) 2652
EcoICRI GAGCTC 3 cut(s) 2324, 2489, 2574
EcoO109I RGGNCCY 4 cut(s) 34, 793, 1035, 1955
EcoRI GAATTC 3 cut(s) 66, 545, 2480
EcoRII CCWGG 3 cut(s) 1031, 1060, 1818
EcoT14I CCWWGG 4 cut(s) 853, 903, 1756, 2577
EcoT38I GRGCYC 4 cut(s) 1510, 2326, 2491, 2576
ErhI CCWWGG 4 cut(s) 853, 903, 1756, 2577
FalI AAGNNNNNCTT 6 cut(s) 1528, 1560, 1568, 1600, 2651, 2683
FaqI GGGAC 2 cut(s) 344, 1968
FauI CCCGC 3 cut(s) 637, 1497, 1987
FauNDI CATATG 1 cut(s) 235
FbaI TGATCA 1 cut(s) 2163
FblI GTMKAC 1 cut(s) 1421
Fnu4HI GCNGC 8 cut(s) 334, 657, 930, 1132, 1824, 2333, 2344, 2672
FokI GGATG 4 cut(s) 661, 1242, 1499, 2281
FriOI GRGCYC 4 cut(s) 1510, 2326, 2491, 2576
Fsp4HI GCNGC 8 cut(s) 334, 657, 930, 1132, 1824, 2333, 2344, 2672
FspBI CTAG 8 cut(s) 80, 119, 603, 702, 1827, 1923, 2003, 2586
GlaI GCGC 1 cut(s) 2331
GluI GCNGC 8 cut(s) 334, 657, 930, 1132, 1824, 2333, 2344, 2672
GsaI CCCAGC 2 cut(s) 592, 871
HaeIII GGCC 5 cut(s) 227, 1982, 2228, 2287, 2641
HapII CCGG 1 cut(s) 896
HhaI GCGC 1 cut(s) 2332
Hin6I GCGC 1 cut(s) 2330
HinP1I GCGC 1 cut(s) 2330
HindIII AAGCTT 2 cut(s) 724, 1582
HinfI GANTC 8 cut(s) 308, 837, 955, 1471, 1562, 1803, 2089, 2129
HpaII CCGG 1 cut(s) 896
HphI GGTGA 8 cut(s) 68, 164, 290, 419, 605, 937, 2618, 2640
Hpy166II GTNNAC 6 cut(s) 23, 76, 169, 1422, 1518, 1717
Hpy8I GTNNAC 6 cut(s) 23, 76, 169, 1422, 1518, 1717
HpyAV CCTTC 4 cut(s) 784, 1685, 1688, 2502
HpyCH4III ACNGT 8 cut(s) 173, 580, 1088, 1194, 1208, 1244, 1394, 1624
HpyCH4IV ACGT 2 cut(s) 1175, 1387
HpyF10VI GCNNNNNNNGC 8 cut(s) 1128, 1137, 1319, 1581, 1820, 1928, 2249, 2668
HpySE526I ACGT 2 cut(s) 1175, 1387
HspAI GCGC 1 cut(s) 2330
Ksp22I TGATCA 1 cut(s) 2163
LguI GCTCTTC 1 cut(s) 2564
LmnI GCTCC 6 cut(s) 447, 790, 1063, 1238, 2494, 2579
Lsp1109I GCAGC 7 cut(s) 345, 668, 916, 1143, 1835, 2319, 2355
LweI GCATC 7 cut(s) 370, 510, 1050, 1220, 2449, 2542, 2548
MaeI CTAG 8 cut(s) 80, 119, 603, 702, 1827, 1923, 2003, 2586
MaeII ACGT 2 cut(s) 1175, 1387
MaeIII GTNAC 6 cut(s) 1383, 1388, 1804, 1850, 1944, 2302
MfeI CAATTG 4 cut(s) 550, 807, 1784, 1809
MflI RGATCY 3 cut(s) 1102, 2194, 2423
MhlI GDGCHC 5 cut(s) 1060, 1510, 2326, 2491, 2576
MlyI GAGTC 2 cut(s) 1571, 1812
MmeI TCCRAC 2 cut(s) 1028, 2064
MroXI GAANNNNTTC 1 cut(s) 2663
MseI TTAA 7 cut(s) 39, 179, 375, 1415, 1652, 1884, 2683
MslI CAYNNNNRTG 6 cut(s) 420, 675, 1086, 1121, 1755, 2114
MspA1I CMGCKG 3 cut(s) 659, 1226, 1994
MspI CCGG 1 cut(s) 896
MspR9I CCNGG 3 cut(s) 1033, 1062, 1820
MunI CAATTG 4 cut(s) 550, 807, 1784, 1809
MvaI CCWGG 3 cut(s) 1033, 1062, 1820
MwoI GCNNNNNNNGC 8 cut(s) 1128, 1137, 1319, 1581, 1820, 1928, 2249, 2668
NcoI CCATGG 3 cut(s) 853, 1756, 2577
NdeI CATATG 1 cut(s) 235
NlaIV GGNNCC 8 cut(s) 35, 241, 449, 786, 795, 900, 1956, 2196
NmeAIII GCCGAG 3 cut(s) 203, 2008, 2488
NmuCI GTSAC 4 cut(s) 1388, 1804, 1944, 2302
NspI RCATGY 2 cut(s) 463, 1126
NspV TTCGAA 1 cut(s) 1798
PaeI GCATGC 1 cut(s) 1126
PaeR7I CTCGAG 1 cut(s) 2652
PceI AGGCCT 1 cut(s) 2228
PciI ACATGT 1 cut(s) 459
PciSI GCTCTTC 1 cut(s) 2564
PcsI WCGNNNNNNNCGW 1 cut(s) 1393
PdmI GAANNNNTTC 1 cut(s) 2663
PfeI GAWTC 6 cut(s) 308, 837, 955, 1471, 2089, 2129
PflMI CCANNNNNTGG 1 cut(s) 263
PinAI ACCGGT 1 cut(s) 895
PkrI GCNGC 8 cut(s) 335, 658, 931, 1133, 1825, 2334, 2345, 2673
PleI GAGTC 2 cut(s) 1570, 1811
PpsI GAGTC 2 cut(s) 1570, 1811
Ppu21I YACGTR 1 cut(s) 1388
PpuMI RGGWCCY 4 cut(s) 34, 793, 1035, 1955
PscI ACATGT 1 cut(s) 459
PsiI TTATAA 2 cut(s) 1203, 1524
Psp124BI GAGCTC 3 cut(s) 2326, 2491, 2576
Psp5II RGGWCCY 4 cut(s) 34, 793, 1035, 1955
Psp6I CCWGG 3 cut(s) 1031, 1060, 1818
PspFI CCCAGC 2 cut(s) 588, 867
PspGI CCWGG 3 cut(s) 1031, 1060, 1818
PspN4I GGNNCC 8 cut(s) 35, 241, 449, 786, 795, 900, 1956, 2196
PspPI GGNCC 5 cut(s) 34, 793, 1035, 1955, 2639
PspPPI RGGWCCY 4 cut(s) 34, 793, 1035, 1955
PstI CTGCAG 3 cut(s) 1133, 1363, 1963
PstNI CAGNNNCTG 2 cut(s) 1038, 2349
PsuI RGATCY 3 cut(s) 1102, 2194, 2423
PvuII CAGCTG 2 cut(s) 659, 1226
RsaI GTAC 5 cut(s) 1157, 1174, 1256, 1718, 2024
RsaNI GTAC 5 cut(s) 1156, 1173, 1255, 1717, 2023
RseI CAYNNNNRTG 6 cut(s) 420, 675, 1086, 1121, 1755, 2114
SacI GAGCTC 3 cut(s) 2326, 2491, 2576
SapI GCTCTTC 1 cut(s) 2564
SaqAI TTAA 7 cut(s) 39, 179, 375, 1415, 1652, 1884, 2683
SatI GCNGC 8 cut(s) 334, 657, 930, 1132, 1824, 2333, 2344, 2672
Sau96I GGNCC 5 cut(s) 34, 793, 1035, 1955, 2639
ScaI AGTACT 1 cut(s) 2024
SchI GAGTC 2 cut(s) 1571, 1812
ScrFI CCNGG 3 cut(s) 1033, 1062, 1820
SduI GDGCHC 5 cut(s) 1060, 1510, 2326, 2491, 2576
SfaNI GCATC 7 cut(s) 370, 510, 1050, 1220, 2449, 2542, 2548
SfcI CTRYAG 5 cut(s) 1129, 1359, 1959, 2026, 2307
Sfr274I CTCGAG 1 cut(s) 2652
SfuI TTCGAA 1 cut(s) 1798
SinI GGWCC 4 cut(s) 34, 793, 1035, 1955
SlaI CTCGAG 1 cut(s) 2652
SmiMI CAYNNNNRTG 6 cut(s) 420, 675, 1086, 1121, 1755, 2114
SmlI CTYRAG 2 cut(s) 1774, 2652
SmoI CTYRAG 2 cut(s) 1774, 2652
SpeI ACTAGT 1 cut(s) 602
SphI GCATGC 1 cut(s) 1126
SseBI AGGCCT 1 cut(s) 2228
SsiI CCGC 5 cut(s) 630, 834, 1375, 1504, 1994
SspI AATATT 1 cut(s) 1650
SspMI CTAG 8 cut(s) 80, 119, 603, 702, 1827, 1923, 2003, 2586
SstI GAGCTC 3 cut(s) 2326, 2491, 2576
StuI AGGCCT 1 cut(s) 2228
StyD4I CCNGG 3 cut(s) 1031, 1060, 1818
StyI CCWWGG 4 cut(s) 853, 903, 1756, 2577
TaaI ACNGT 8 cut(s) 173, 580, 1088, 1194, 1208, 1244, 1394, 1624
TaiI ACGT 2 cut(s) 1178, 1390
TaqI TCGA 6 cut(s) 471, 1445, 1798, 1876, 1905, 2653
TaqII GACCGA 1 cut(s) 2533
TatI WGTACW 1 cut(s) 2022
TfiI GAWTC 6 cut(s) 308, 837, 955, 1471, 2089, 2129
Tru1I TTAA 7 cut(s) 39, 179, 375, 1415, 1652, 1884, 2683
Tru9I TTAA 7 cut(s) 39, 179, 375, 1415, 1652, 1884, 2683
TseFI GTSAC 4 cut(s) 1388, 1804, 1944, 2302
TseI GCWGC 8 cut(s) 333, 656, 929, 1131, 1823, 2332, 2343, 2671
Tsp45I GTSAC 4 cut(s) 1388, 1804, 1944, 2302
TspDTI ATGAA 7 cut(s) 815, 896, 1086, 1239, 1714, 2139, 2484
TspGWI ACGGA 1 cut(s) 124
Van91I CCANNNNNTGG 1 cut(s) 263
VpaK11BI GGWCC 4 cut(s) 34, 793, 1035, 1955
XapI RAATTY 4 cut(s) 66, 94, 545, 2480
XbaI TCTAGA 1 cut(s) 701
XceI RCATGY 2 cut(s) 463, 1126
XcmI CCANNNNNNNNNTGG 2 cut(s) 1460, 1754
XhoI CTCGAG 1 cut(s) 2652
XmiI GTMKAC 1 cut(s) 1421
XmnI GAANNNNTTC 1 cut(s) 2663
XspI CTAG 8 cut(s) 80, 119, 603, 702, 1827, 1923, 2003, 2586
ZrmI AGTACT 1 cut(s) 2024
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.