Rh4DG134300

Serine threonine-protein kinase-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
26704522 .. 26707953
3432 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG134300.1

Sequence Viewer

Length: 2832 bp
ATGAGGTTGGGTTTTTCAACTTGTTGCCAAAGCTGTGTTTCAGGAAGGGCTTTCCTCATTTGGGTCCTGCTGATCGTCGTACACGTGATGGTGGTTTCTTTAGGAGGTTTACTGATCTGGGTCCTTAATATCAACAACACACACAGAGCTGGAATTCTTGTTCACCTTGTAGCTTTATCAAATTTATGGTGTTTAGTTTCAGGACTAGGTTCTATGTCCTCCGTTGCAGTTTCTTATGGTGAGAAAGGTGCAGTTTACTGTGGCTTAAACTTGAATGGGTCTAATCTTGTGAGCTGTTATGGATCAAACTCGGCCATAACATATGGAACCCCAATTCACTTCCCATTTATTGGTCTGACTGCTGGTGATGGCTTTGTTTGTGGTCTGCTCATGGATTCTAACCAACCATATTGTTGGGGCAGCAGTGGTTATATTCAAATGGGTGTCCCTCAACCCATTATTAAAGATGCCCAATACGTAGAAATCAGTGCTGGTGATTACCATCTCTGTGGATTGAGAAAATCTCTAACAGGGAGCCTCAGAAACATGTCTTTTGTCGATTGTTGGGGCTATAACATGACCAAAAACTATGTGTTTGATGGTCAGATGCAGTCCATTACAGCAGGGTCAGAATTCAATTGTGGATTGTTTTCCCAAAACAGGACTGTGTTTTGCTGGGGTGATGAGACTAGTAGTAGGGTTATCCATTTGATCCCCGCAGACATGAGGTTTCGGAAGATTGCAGCTGGTGGGTATCATGTCTGTGGCATTTCAGAGGGTGTGAGTTCTAGAACCTTTTGTTGGGGAAGAAGCTTGGACATTGAAGACGAAATCTCAGTGGCATATTCGGGTCAAGGCAATGTTGATTTGGCTCCGAAGGACCCAATGCTTTCAATTGTGGGAGGGAAGTTTCATGCCTGCGGAATCAAGAGCTATGACCATGGTGTCATCTGCTGGGGATTTATTATGAAGCCAAGCACACCGGTTCCCAAGGGTATCAAGGTTTATGACATTGCTGCTGGAAATTACTTCACTTGTGGGATTCGTGCTGACAAATCATTCTTGCCTGTTTGTTGGGGTCTTGGATTTCCGACTTCTCTTCCATTACCTGTTCCCCCCAGGTCCTGCAGCTCTACTCCATGTGCTCCTGGCTTCTATGAACTCAGCCATAACAGCGCCTCTTGCAAAGATCCCAACTCTCACATTTGCATGCCCTGCAGCACTGGCTGTCCCGCTGAAATGTACCAAAAAACTGAATGTACGTTGAAATCTGATAGACAGTGTGATTATAACTGTTCTATTTGTTCCTCAGCTGGATGCTTCTCAAACTGTTCTTCATTGTACGCCAATTCAAAGAGGAACGAAAGGTTCTGGTCTCTGCAATTACCTGTCATTATTGCTGAGATTGCCTTTGCTATGATATTGGTCAGTGTTGTGTCTCTAACTGCAGTTTTATATGTCCGCTACAAGTTACGTGACTGTCGTTGCACAGAAAAATACTTAAAGTCTACAAAGAATGGTCGCAGTGGTTCTCCTTACCAGAAAGACATTGGCAAGATTCGTCCAGACTTGGATGATCTGAAGATAAGGCGGGCTCAGATGTTTACTTATGAGGAACTGGAAAGAGCAACTTCGGGGTTTGAAGAAGAGTCTGTTGTGGGCAAGGGAAGCTTCTCCTCAGTTTTTAGAGGTGTTTTGAAAGATGGAACAGTTGTGGCTGTCAAAAGGGCTATAATGTCTCCTAACATGCAAAAGAATTCAAAAGAGTTCCATACTGAGCTAGACTTGCTCTCCAGATTAAACCATGCTCATTTACTCAACCTGCTTGGCTATTGTGAAGAAGGTGGAGAGAGGCTTCTTGTGTACGAGTTCATGGCTCATGGATCATTGCACCAGCACCTCCATGGAAAGAACAAAGCCTTGAGAGAGCAATTGGACTGGGTTCGAAGAGTCACAATTGCAGTCCAGGCAGCTAGGGGAATTGAATACTTGCATGGGTACGCTTGCCCACCAGTGATCCATCGAGATATTAAGTCTTCTAATATCTTGATCGATGAGGAACACAATGCTAGAGTAGCTGATTTTGGCTTGTCACTATTGGGACCTGCAGATAGTAGTTCCCCATTGGCCGAGCTACCAGCGGGAACTCTAGGGTATCTTGATCCTGAGTACTACAGGCTTCACTACCTGACAACCAAATCTGATGTTTATAGTTTTGGTGTTTTGCTGTTGGAGATTCTTAGTGGCAGAAAAGCCATTGATATGCAATATGAAGAATCAGGAAATATAGTTGAATGGGCAGTGCCTCTGATCAAGGCAGGAGACATATTTACAATTTTGGATCCAGTTTTGAAACCCCCACCTGATGTTGAAGCCTTGAAAAGAATTGCAAATGTTGCTTGCAAATGTGTGAGGATGAGAGGCAAGGAGAGGCCGTCAATGGATAAAGTGACTACAGCACTTGAACGAGCTCTTGCGCTGCTAATGGGCAGCCCCTGTAATGAGCAACCCATTCTGCCTACTGAGGTGGTATTGGGAAGCAGTAGATTGCACAAGAAGTCATCGCAGAGATCTTCAAACAGGTCAGTGGAAACTGATGTTATAGATGCCGAGGATCAGAGGTTTGAATTCAGAGCTCCTTCATGGATCACATTTCCGAGTGTTGCTTCTTCCCAGAGGAGGAAATCCTCGGTCTCAGATGCCGATGCTGATGGGAAGAGCTCCATGGAAGCTAGAAATATGGGGAATGGTGGTGATGGGTTGAGGAGTTTGGAGGAAGAGATTGGGCCAGCTTCACCTCGAGAGAAGCTATTCTTGCAGCATAATTTTTAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

943

Amino Acids

103.67

Weight (kDa)

7.78

Isoelectric Point (pI)

46.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 547 - 817 3.4e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 550 - 820 2.3e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G59420
fragaria_vesca FvH4_4g10810
malus_domestica MD04G1040500.v1.1
prunus_persica Prupe.1G194300_v2.0.a1
pyrus_communis pycom04g03540
rosa_chinensis RchiOBHm_Chr4g0406691
rosa_laevigata RLG00000008760
rosa_multiflora Rmu_sc0017281.1_g000002
rosa_roxburghii Rroxscaffold_5G00351530
rosa_rugosa Rorug04G0072900
rosa_samantha Rh4AG140300 Rh4BG137300 Rh4CG147200 Rh4DG134300
rosa_wichuraiana Rw4G011430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1290
AasI GACNNNNNNGTC 1 cut(s) 944
Acc36I ACCTGC 2 cut(s) 1830, 2113
AccB7I CCANNNNNTGG 1 cut(s) 350
AccI GTMKAC 1 cut(s) 1508
AciI CCGC 6 cut(s) 717, 921, 1233, 1462, 1591, 2141
AcoI YGGCCR 2 cut(s) 312, 2127
AcsI RAATTY 5 cut(s) 153, 181, 632, 1756, 2627
AcuI CTGAAG 1 cut(s) 1601
AcvI CACGTG 1 cut(s) 85
AfaI GTAC 7 cut(s) 81, 1244, 1261, 1343, 1865, 2000, 2171
AfiI CCNNNNNNNGG 5 cut(s) 61, 350, 660, 801, 2679
AflIII ACRYGT 2 cut(s) 82, 546
AgeI ACCGGT 1 cut(s) 982
AhlI ACTAGT 1 cut(s) 689
AjnI CCWGG 3 cut(s) 1118, 1147, 1965
AjuI GAANNNNNNNTTGG 2 cut(s) 784, 816
AloI GAACNNNNNNTCC 2 cut(s) 144, 176
Alw21I GWGCWC 4 cut(s) 1147, 2473, 2638, 2723
Alw26I GTCTC 6 cut(s) 680, 1380, 1443, 1743, 2316, 2698
AlwNI CAGNNNCTG 2 cut(s) 1125, 2496
Ama87I CYCGRG 1 cut(s) 2799
AoxI GGCC 4 cut(s) 312, 2127, 2432, 2786
ApeKI GCWGC 9 cut(s) 420, 743, 1016, 1128, 1218, 1970, 2479, 2490, 2818
ApoI RAATTY 5 cut(s) 153, 181, 632, 1756, 2627
AsiGI ACCGGT 1 cut(s) 982
Asp700I GAANNNNTTC 1 cut(s) 2810
AspLEI GCGC 2 cut(s) 1178, 2479
AspS9I GGNCC 6 cut(s) 64, 121, 880, 1122, 2102, 2786
AsuHPI GGTGA 7 cut(s) 155, 251, 377, 506, 692, 2765, 2787
AsuII TTCGAA 1 cut(s) 1945
AvaI CYCGRG 1 cut(s) 2799
AvaII GGWCC 5 cut(s) 64, 121, 880, 1122, 2102
BamHI GGATCC 1 cut(s) 2341
BanII GRGCYC 4 cut(s) 1597, 2473, 2638, 2723
BbrPI CACGTG 1 cut(s) 85
BbsI GAAGAC 2 cut(s) 831, 2028
Bbv12I GWGCWC 4 cut(s) 1147, 2473, 2638, 2723
BbvCI CCTCAGC 1 cut(s) 1309
BbvI GCAGC 8 cut(s) 432, 755, 1003, 1140, 1230, 1982, 2466, 2502
BccI CCATC 8 cut(s) 82, 362, 510, 593, 1697, 2028, 2705, 2750
BceAI ACGGC 1 cut(s) 2419
BciT130I CCWGG 3 cut(s) 1120, 1149, 1967
BclI TGATCA 1 cut(s) 2310
BcoDI GTCTC 6 cut(s) 680, 1380, 1443, 1743, 2316, 2698
BcuI ACTAGT 1 cut(s) 689
BfaI CTAG 8 cut(s) 206, 690, 789, 1781, 1974, 2070, 2150, 2733
BfmI CTRYAG 6 cut(s) 1126, 1216, 1446, 2106, 2173, 2454
BfoI RGCGCY 1 cut(s) 1179
BfuAI ACCTGC 2 cut(s) 1830, 2113
BglII AGATCT 1 cut(s) 2570
BisI GCNGC 9 cut(s) 421, 744, 1017, 1129, 1219, 1971, 2480, 2491, 2819
BlsI GCNGC 9 cut(s) 422, 745, 1018, 1130, 1220, 1972, 2481, 2492, 2820
BmcAI AGTACT 1 cut(s) 2171
Bme1390I CCNGG 3 cut(s) 1120, 1149, 1967
Bme18I GGWCC 5 cut(s) 64, 121, 880, 1122, 2102
BmeT110I CYCGRG 1 cut(s) 2799
BmgT120I GGNCC 6 cut(s) 64, 121, 880, 1122, 2102, 2786
BmiI GGNNCC 9 cut(s) 65, 122, 328, 536, 873, 882, 987, 2103, 2343
BmrFI CCNGG 3 cut(s) 1120, 1149, 1967
BmrI ACTGGG 1 cut(s) 1948
BmsI GCATC 6 cut(s) 457, 597, 1307, 2596, 2689, 2695
BmuI ACTGGG 1 cut(s) 1948
BpiI GAAGAC 2 cut(s) 831, 2028
BplI GAGNNNNNCTC 2 cut(s) 508, 540
BpmI CTGGAG 1 cut(s) 1777
Bpu10I CCTNAGC 1 cut(s) 1309
Bpu14I TTCGAA 1 cut(s) 1945
BpuEI CTTGAG 1 cut(s) 1942
Bsa29I ATCGAT 1 cut(s) 2052
BsaAI YACGTR 3 cut(s) 85, 478, 1475
BsaBI GATNNNNATC 1 cut(s) 501
BsaI GGTCTC 2 cut(s) 1380, 2698
BsaJI CCNNGG 7 cut(s) 940, 990, 1118, 1903, 2610, 2688, 2724
BsaWI WCCGGW 1 cut(s) 982
BsaXI ACNNNNNCTCC 4 cut(s) 1775, 1805, 2420, 2450
Bsc4I CCNNNNNNNGG 5 cut(s) 61, 350, 660, 801, 2679
Bse118I RCCGGY 1 cut(s) 982
Bse1I ACTGG 5 cut(s) 1228, 1623, 1943, 2012, 2345
Bse3DI GCAATG 3 cut(s) 865, 1011, 1886
Bse8I GATNNNNATC 1 cut(s) 501
BseBI CCWGG 3 cut(s) 1120, 1149, 1967
BseCI ATCGAT 1 cut(s) 2052
BseDI CCNNGG 7 cut(s) 940, 990, 1118, 1903, 2610, 2688, 2724
BseGI GGATG 3 cut(s) 1322, 1579, 2421
BseJI GATNNNNATC 1 cut(s) 501
BseLI CCNNNNNNNGG 5 cut(s) 61, 350, 660, 801, 2679
BseMI GCAATG 3 cut(s) 865, 1011, 1886
BseNI ACTGG 5 cut(s) 1228, 1623, 1943, 2012, 2345
BseRI GAGGAG 3 cut(s) 1666, 2692, 2779
BseXI GCAGC 8 cut(s) 432, 755, 1003, 1140, 1230, 1982, 2466, 2502
BseYI CCCAGC 2 cut(s) 675, 954
BsgI GTGCAG 1 cut(s) 270
BshFI GGCC 4 cut(s) 314, 2129, 2434, 2788
BshTI ACCGGT 1 cut(s) 982
BshVI ATCGAT 1 cut(s) 2052
BsiHKAI GWGCWC 4 cut(s) 1147, 2473, 2638, 2723
BsiHKCI CYCGRG 1 cut(s) 2799
BsiSI CCGG 1 cut(s) 983
BslFI GGGAC 3 cut(s) 431, 1215, 2115
BslI CCNNNNNNNGG 5 cut(s) 61, 350, 660, 801, 2679
BsmAI GTCTC 6 cut(s) 680, 1380, 1443, 1743, 2316, 2698
BsmFI GGGAC 3 cut(s) 431, 1215, 2115
BsnI GGCC 4 cut(s) 314, 2129, 2434, 2788
Bso31I GGTCTC 2 cut(s) 1380, 2698
BsoBI CYCGRG 1 cut(s) 2799
Bsp119I TTCGAA 1 cut(s) 1945
Bsp1286I GDGCHC 5 cut(s) 1147, 1597, 2473, 2638, 2723
Bsp19I CCATGG 3 cut(s) 940, 1903, 2724
BspACI CCGC 6 cut(s) 717, 921, 1233, 1462, 1591, 2141
BspANI GGCC 4 cut(s) 314, 2129, 2434, 2788
BspDI ATCGAT 1 cut(s) 2052
BspLI GGNNCC 9 cut(s) 65, 122, 328, 536, 873, 882, 987, 2103, 2343
BspMAI CTGCAG 4 cut(s) 1130, 1220, 1450, 2110
BspMI ACCTGC 2 cut(s) 1830, 2113
BspQI GCTCTTC 1 cut(s) 2711
BspT104I TTCGAA 1 cut(s) 1945
BspTNI GGTCTC 2 cut(s) 1380, 2698
BsrDI GCAATG 3 cut(s) 865, 1011, 1886
BsrFI RCCGGY 1 cut(s) 982
BsrI ACTGG 5 cut(s) 1228, 1623, 1943, 2012, 2345
BssAI RCCGGY 1 cut(s) 982
BssECI CCNNGG 7 cut(s) 940, 990, 1118, 1903, 2610, 2688, 2724
BssT1I CCWWGG 4 cut(s) 940, 990, 1903, 2724
Bst2UI CCWGG 3 cut(s) 1120, 1149, 1967
Bst4CI ACNGT 7 cut(s) 260, 667, 1281, 1295, 1331, 1481, 1711
Bst6I CTCTTC 5 cut(s) 1104, 1641, 1942, 2711, 2772
BstAPI GCANNNNNTGC 2 cut(s) 1215, 2396
BstBAI YACGTR 3 cut(s) 85, 478, 1475
BstBI TTCGAA 1 cut(s) 1945
BstC8I GCNNGC 6 cut(s) 919, 1211, 1593, 2005, 2401, 2790
BstDSI CCRYGG 3 cut(s) 940, 1903, 2724
BstF5I GGATG 3 cut(s) 1322, 1579, 2421
BstH2I RGCGCY 1 cut(s) 1179
BstHHI GCGC 2 cut(s) 1178, 2479
BstMAI GTCTC 6 cut(s) 680, 1380, 1443, 1743, 2316, 2698
BstNI CCWGG 3 cut(s) 1120, 1149, 1967
BstNSI RCATGY 3 cut(s) 550, 1213, 1750
BstSCI CCNGG 3 cut(s) 1118, 1147, 1965
BstSFI CTRYAG 6 cut(s) 1126, 1216, 1446, 2106, 2173, 2454
BstSNI TACGTA 1 cut(s) 478
BstV1I GCAGC 8 cut(s) 432, 755, 1003, 1140, 1230, 1982, 2466, 2502
BstV2I GAAGAC 2 cut(s) 831, 2028
BstX2I RGATCY 3 cut(s) 1189, 2341, 2570
BstXI CCANNNNNNTGG 2 cut(s) 414, 509
BstYI RGATCY 3 cut(s) 1189, 2341, 2570
Bsu15I ATCGAT 1 cut(s) 2052
BsuRI GGCC 4 cut(s) 314, 2129, 2434, 2788
BsuTUI ATCGAT 1 cut(s) 2052
BtgI CCRYGG 3 cut(s) 940, 1903, 2724
BtgZI GCGATG 1 cut(s) 2547
BtsCI GGATG 3 cut(s) 1322, 1579, 2421
BtsI GCAGTG 3 cut(s) 430, 1531, 2307
BveI ACCTGC 2 cut(s) 1830, 2113
Cac8I GCNNGC 6 cut(s) 919, 1211, 1593, 2005, 2401, 2790
CaiI CAGNNNCTG 2 cut(s) 1125, 2496
CfoI GCGC 2 cut(s) 1178, 2479
Cfr10I RCCGGY 1 cut(s) 982
Cfr13I GGNCC 6 cut(s) 64, 121, 880, 1122, 2102, 2786
ClaI ATCGAT 1 cut(s) 2052
Csp6I GTAC 7 cut(s) 80, 1243, 1260, 1342, 1864, 1999, 2170
CspAI ACCGGT 1 cut(s) 982
CviQI GTAC 7 cut(s) 80, 1243, 1260, 1342, 1864, 1999, 2170
DrdI GACNNNNNNGTC 1 cut(s) 944
DseDI GACNNNNNNGTC 1 cut(s) 944
EaeI YGGCCR 2 cut(s) 312, 2127
Eam1104I CTCTTC 5 cut(s) 1104, 1641, 1942, 2711, 2772
EarI CTCTTC 5 cut(s) 1104, 1641, 1942, 2711, 2772
Ecl136II GAGCTC 3 cut(s) 2471, 2636, 2721
Eco105I TACGTA 1 cut(s) 478
Eco130I CCWWGG 4 cut(s) 940, 990, 1903, 2724
Eco24I GRGCYC 4 cut(s) 1597, 2473, 2638, 2723
Eco31I GGTCTC 2 cut(s) 1380, 2698
Eco47I GGWCC 5 cut(s) 64, 121, 880, 1122, 2102
Eco53kI GAGCTC 3 cut(s) 2471, 2636, 2721
Eco57I CTGAAG 1 cut(s) 1601
Eco72I CACGTG 1 cut(s) 85
Eco88I CYCGRG 1 cut(s) 2799
EcoICRI GAGCTC 3 cut(s) 2471, 2636, 2721
EcoO109I RGGNCCY 5 cut(s) 64, 121, 880, 1122, 2102
EcoRI GAATTC 4 cut(s) 153, 632, 1756, 2627
EcoRII CCWGG 3 cut(s) 1118, 1147, 1965
EcoT14I CCWWGG 4 cut(s) 940, 990, 1903, 2724
EcoT38I GRGCYC 4 cut(s) 1597, 2473, 2638, 2723
ErhI CCWWGG 4 cut(s) 940, 990, 1903, 2724
FalI AAGNNNNNCTT 6 cut(s) 1615, 1647, 1655, 1687, 2798, 2830
FaqI GGGAC 3 cut(s) 431, 1215, 2115
FauI CCCGC 4 cut(s) 724, 1240, 1584, 2134
FauNDI CATATG 1 cut(s) 322
FbaI TGATCA 1 cut(s) 2310
FblI GTMKAC 1 cut(s) 1508
Fnu4HI GCNGC 9 cut(s) 421, 744, 1017, 1129, 1219, 1971, 2480, 2491, 2819
FokI GGATG 3 cut(s) 1329, 1586, 2428
FriOI GRGCYC 4 cut(s) 1597, 2473, 2638, 2723
Fsp4HI GCNGC 9 cut(s) 421, 744, 1017, 1129, 1219, 1971, 2480, 2491, 2819
FspBI CTAG 8 cut(s) 206, 690, 789, 1781, 1974, 2070, 2150, 2733
GlaI GCGC 2 cut(s) 1177, 2478
GluI GCNGC 9 cut(s) 421, 744, 1017, 1129, 1219, 1971, 2480, 2491, 2819
GsaI CCCAGC 2 cut(s) 679, 958
GsuI CTGGAG 1 cut(s) 1777
HaeII RGCGCY 1 cut(s) 1179
HaeIII GGCC 4 cut(s) 314, 2129, 2434, 2788
HapII CCGG 1 cut(s) 983
HhaI GCGC 2 cut(s) 1178, 2479
Hin6I GCGC 2 cut(s) 1176, 2477
HinP1I GCGC 2 cut(s) 1176, 2477
HindIII AAGCTT 2 cut(s) 811, 1669
HinfI GANTC 8 cut(s) 395, 924, 1042, 1558, 1649, 1950, 2236, 2276
HpaII CCGG 1 cut(s) 983
HphI GGTGA 7 cut(s) 155, 251, 377, 506, 692, 2765, 2787
Hpy166II GTNNAC 7 cut(s) 82, 110, 163, 256, 1509, 1605, 1864
Hpy8I GTNNAC 7 cut(s) 82, 110, 163, 256, 1509, 1605, 1864
Hpy99I CGWCG 1 cut(s) 80
HpyAV CCTTC 4 cut(s) 39, 871, 1835, 2649
HpyCH4III ACNGT 7 cut(s) 260, 667, 1281, 1295, 1331, 1481, 1711
HpyCH4IV ACGT 4 cut(s) 84, 477, 1262, 1474
HpySE526I ACGT 4 cut(s) 84, 477, 1262, 1474
HspAI GCGC 2 cut(s) 1176, 2477
Ksp22I TGATCA 1 cut(s) 2310
LguI GCTCTTC 1 cut(s) 2711
LmnI GCTCC 5 cut(s) 534, 877, 1150, 2641, 2726
Lsp1109I GCAGC 8 cut(s) 432, 755, 1003, 1140, 1230, 1982, 2466, 2502
LweI GCATC 6 cut(s) 457, 597, 1307, 2596, 2689, 2695
MaeI CTAG 8 cut(s) 206, 690, 789, 1781, 1974, 2070, 2150, 2733
MaeII ACGT 4 cut(s) 84, 477, 1262, 1474
MaeIII GTNAC 5 cut(s) 1470, 1475, 1951, 2091, 2449
MfeI CAATTG 4 cut(s) 637, 894, 1931, 1956
MflI RGATCY 3 cut(s) 1189, 2341, 2570
MhlI GDGCHC 5 cut(s) 1147, 1597, 2473, 2638, 2723
MlyI GAGTC 2 cut(s) 1658, 1959
MmeI TCCRAC 2 cut(s) 1115, 2211
MroXI GAANNNNTTC 1 cut(s) 2810
MseI TTAA 7 cut(s) 126, 266, 462, 1502, 1799, 2031, 2830
MslI CAYNNNNRTG 5 cut(s) 507, 762, 1208, 1902, 2261
MspA1I CMGCKG 4 cut(s) 746, 1235, 1313, 2141
MspI CCGG 1 cut(s) 983
MspR9I CCNGG 3 cut(s) 1120, 1149, 1967
MunI CAATTG 4 cut(s) 637, 894, 1931, 1956
MvaI CCWGG 3 cut(s) 1120, 1149, 1967
NcoI CCATGG 3 cut(s) 940, 1903, 2724
NdeI CATATG 1 cut(s) 322
NlaIV GGNNCC 9 cut(s) 65, 122, 328, 536, 873, 882, 987, 2103, 2343
NmeAIII GCCGAG 3 cut(s) 290, 2155, 2635
NmuCI GTSAC 4 cut(s) 1475, 1951, 2091, 2449
NspI RCATGY 3 cut(s) 550, 1213, 1750
NspV TTCGAA 1 cut(s) 1945
PaeI GCATGC 1 cut(s) 1213
PaeR7I CTCGAG 1 cut(s) 2799
PciI ACATGT 1 cut(s) 546
PciSI GCTCTTC 1 cut(s) 2711
PcsI WCGNNNNNNNCGW 2 cut(s) 81, 1480
PdmI GAANNNNTTC 1 cut(s) 2810
PfeI GAWTC 6 cut(s) 395, 924, 1042, 1558, 2236, 2276
PflMI CCANNNNNTGG 1 cut(s) 350
PinAI ACCGGT 1 cut(s) 982
PkrI GCNGC 9 cut(s) 422, 745, 1018, 1130, 1220, 1972, 2481, 2492, 2820
PleI GAGTC 2 cut(s) 1657, 1958
PmaCI CACGTG 1 cut(s) 85
PmlI CACGTG 1 cut(s) 85
PpsI GAGTC 2 cut(s) 1657, 1958
Ppu21I YACGTR 3 cut(s) 85, 478, 1475
PpuMI RGGWCCY 5 cut(s) 64, 121, 880, 1122, 2102
PscI ACATGT 1 cut(s) 546
PsiI TTATAA 1 cut(s) 1290
Psp124BI GAGCTC 3 cut(s) 2473, 2638, 2723
Psp5II RGGWCCY 5 cut(s) 64, 121, 880, 1122, 2102
Psp6I CCWGG 3 cut(s) 1118, 1147, 1965
PspCI CACGTG 1 cut(s) 85
PspFI CCCAGC 2 cut(s) 675, 954
PspGI CCWGG 3 cut(s) 1118, 1147, 1965
PspN4I GGNNCC 9 cut(s) 65, 122, 328, 536, 873, 882, 987, 2103, 2343
PspPI GGNCC 6 cut(s) 64, 121, 880, 1122, 2102, 2786
PspPPI RGGWCCY 5 cut(s) 64, 121, 880, 1122, 2102
PstI CTGCAG 4 cut(s) 1130, 1220, 1450, 2110
PstNI CAGNNNCTG 2 cut(s) 1125, 2496
PsuI RGATCY 3 cut(s) 1189, 2341, 2570
PvuII CAGCTG 2 cut(s) 746, 1313
RsaI GTAC 7 cut(s) 81, 1244, 1261, 1343, 1865, 2000, 2171
RsaNI GTAC 7 cut(s) 80, 1243, 1260, 1342, 1864, 1999, 2170
RseI CAYNNNNRTG 5 cut(s) 507, 762, 1208, 1902, 2261
SacI GAGCTC 3 cut(s) 2473, 2638, 2723
SapI GCTCTTC 1 cut(s) 2711
SaqAI TTAA 7 cut(s) 126, 266, 462, 1502, 1799, 2031, 2830
SatI GCNGC 9 cut(s) 421, 744, 1017, 1129, 1219, 1971, 2480, 2491, 2819
Sau96I GGNCC 6 cut(s) 64, 121, 880, 1122, 2102, 2786
ScaI AGTACT 1 cut(s) 2171
SchI GAGTC 2 cut(s) 1658, 1959
ScrFI CCNGG 3 cut(s) 1120, 1149, 1967
SduI GDGCHC 5 cut(s) 1147, 1597, 2473, 2638, 2723
SfaNI GCATC 6 cut(s) 457, 597, 1307, 2596, 2689, 2695
SfcI CTRYAG 6 cut(s) 1126, 1216, 1446, 2106, 2173, 2454
Sfr274I CTCGAG 1 cut(s) 2799
SfuI TTCGAA 1 cut(s) 1945
SinI GGWCC 5 cut(s) 64, 121, 880, 1122, 2102
SlaI CTCGAG 1 cut(s) 2799
SmiMI CAYNNNNRTG 5 cut(s) 507, 762, 1208, 1902, 2261
SmlI CTYRAG 2 cut(s) 1921, 2799
SmoI CTYRAG 2 cut(s) 1921, 2799
SnaBI TACGTA 1 cut(s) 478
SpeI ACTAGT 1 cut(s) 689
SphI GCATGC 1 cut(s) 1213
SsiI CCGC 6 cut(s) 717, 921, 1233, 1462, 1591, 2141
SspMI CTAG 8 cut(s) 206, 690, 789, 1781, 1974, 2070, 2150, 2733
SstI GAGCTC 3 cut(s) 2473, 2638, 2723
StyD4I CCNGG 3 cut(s) 1118, 1147, 1965
StyI CCWWGG 4 cut(s) 940, 990, 1903, 2724
TaaI ACNGT 7 cut(s) 260, 667, 1281, 1295, 1331, 1481, 1711
TaiI ACGT 4 cut(s) 87, 480, 1265, 1477
TaqI TCGA 5 cut(s) 558, 1945, 2023, 2052, 2800
TaqII GACCGA 1 cut(s) 2680
TatI WGTACW 1 cut(s) 2169
TfiI GAWTC 6 cut(s) 395, 924, 1042, 1558, 2236, 2276
Tru1I TTAA 7 cut(s) 126, 266, 462, 1502, 1799, 2031, 2830
Tru9I TTAA 7 cut(s) 126, 266, 462, 1502, 1799, 2031, 2830
TseFI GTSAC 4 cut(s) 1475, 1951, 2091, 2449
TseI GCWGC 9 cut(s) 420, 743, 1016, 1128, 1218, 1970, 2479, 2490, 2818
Tsp45I GTSAC 4 cut(s) 1475, 1951, 2091, 2449
TspDTI ATGAA 7 cut(s) 902, 983, 1173, 1326, 1861, 2286, 2631
TspGWI ACGGA 1 cut(s) 211
Van91I CCANNNNNTGG 1 cut(s) 350
VpaK11BI GGWCC 5 cut(s) 64, 121, 880, 1122, 2102
XapI RAATTY 5 cut(s) 153, 181, 632, 1756, 2627
XbaI TCTAGA 1 cut(s) 788
XceI RCATGY 3 cut(s) 550, 1213, 1750
XcmI CCANNNNNNNNNTGG 2 cut(s) 1547, 1901
XhoI CTCGAG 1 cut(s) 2799
XmiI GTMKAC 1 cut(s) 1508
XmnI GAANNNNTTC 1 cut(s) 2810
XspI CTAG 8 cut(s) 206, 690, 789, 1781, 1974, 2070, 2150, 2733
ZrmI AGTACT 1 cut(s) 2171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.