RLG00000008760

Serine threonine-protein kinase-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0016108
Physical Location & Seq
Reverse (-)
36641709 .. 36644330
2622 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000008760

Sequence Viewer

Length: 2505 bp
ATGTCCTCCATTGCAGTTTCTTATGGTGAGAAAGGTGCAGTTTACTGTGGCTTAAACTTAAATGGGTCTAATCTTGTGAGCTGTTATGGATCAAACTCGGCCATAACATATGGAACCCCAATTCACTTCCCATTTATTGGCCTGACTGCTGGTGATGGCTTTGTTTGTGGTCTGCTCATGGATTCTAACCAACCATATTGTTGGGGTAGCAGTGGTTATATTCAAATGGGTGTCCCTCAACCCATTATTAAAGATGCCCAATATGTAGAAATCAGTGCTGGTGATTACCATCTCTGTGGATTGAGAAAACCTCTAACAGGGAGCCTCAGAAACATGTCTTTTGTCGATTGTTGGGGCTATAACATGACCAAAAACTATGTGTTTGATGGTCAGATGCAGTCCATTACAGCAGGGTCAGAATTCAATTGTGGATTGTTTTCCCAAAACAGGACTGTGTTTTGCTGGGGTGATGAGACTAGTAGTAGGGTTATCCATTTGATCCCCGCAGACATGAGGTTTCGGAAGATTGCAGCCGGTGGATATCATGTCTGTGGCATTTCAGAGGGTGTGAGTTCTAGAACCTTTTGTTGGGGAAGAAGCTTGGACATTGAAGAAGAAATCTCAGTGGCATATTCAGGTCAAGGCAATGTTGATTTGGCTCCGAAGGACCCAATGCTTTCAATTGTGGGAGGGAAGTTTCATGCGTGCGGAATCAAGAGCTATGACCATGGTGTCATCTGCTGGGGATTTATTATGAAGCCAAGCACACCGGTTCCCAAGGGTATCAAGGTTTATGACATTGCTGCCGGAAATTACTTCACTTGTGGGATTCGTGCTGACAAATCATTCTTGCCTGTTTGTTGGGGTCTTGGATTTCCGACTTCTCTTCCATTACCAGCTGTTCCCCCCAGGTCCTGCGGCTCCACTCCATGTGCTTCTGGCTTCTATGAACTCAGCCATGACAGCGCCTCTTGCAAAGATCGCAACTCTCACATTTGCATGCCCTGCAGCACTGGCTGTCCTGCTGAAATGTACCAAAAAACTGAATGTACATTGAAATCTGATAGACAGTGTGATTATAACTGTTCTATTTGTTCCTCAGCTGAATGCTCCTCAAACTGTTCTTCATTGTACGCCAATTCAAAGAGGAATGAAAGGTTCTGGTCTCTGCAATTGCCTGTCATTATTGCTGAGATTGCCTTTGCTATGATATTGAAAGACATTGGCAAGATTCGTCCAGACTTGGATGATCTGAAGATAAGGCGGGCTCAGATGTTTACTTATGAGGAACTGGAAAGAGCAACTTCGGGGTTTGAAGAAGAGTCTGTTGTGGGCAAGGGAAGCTTCTCCTCAGTTTTTAGAGGTGTTTTGAAAGATGGAACAGTTGTTGCTGTCAAAAGGGCTATAATGTCTCCTAACATGCAAAAGAATTCGAAAGAGTTCCATACTGAGCTAGACTTGCTCTCCAGATTAAACCATGCTCATTTACTCAACCTGCTTGGATATTGTGAAGAAGGTGGAGAGAGGCTTCTTGTGTATGAGTTCATGGCTCATGGATCATTGCACCAGCACCTCCATGGAAAGAACAAAGCCTTGAGAGAGCAATTGGACTGGGTTCGAAGAGTCACAATTGCAGTCCAGGCAGCTAGGGGAATTGAATACTTGCATGGTTACGCTTGCCCACCAGTGATCCATCGAGATATTAAGTCTTCAAATATCCTGATTGATGAGGAACACAATGCTCGAGTAGCTGATTTTGGCTTGTCACTATTGGGACCTGCAGATAGTAGTTCTCCATTGGCCGAGCTACCAGCGGGGACTCTAGGGTATCTTGATCCTGAGTACTACAGACTTCACTACCTGACAACCAAATCTGATGTTTATAGTTTTGGTGTTTTGCTGTTGGAGATTCTTAGTGGCAGAAAAGCCATTGATATGCAATATGAAGAATCAGGAAATATAGTTGAATGGGCAGTACCTCTGATCAAGGCAGGAGACATATTTGCAATTTTGGATCCAGTTTTGAAACCCCCACCTGATGTTGAAGCCTTGAAAAGAATTGCAAATGTTGCTTGCAAATGTGTGAGGATGAGAGGCAAGGAGAGGCCATCAATGGATAAAGTGACTACAGCACTTGAACGAGCTCTTGCGCTGCTAATGGGCAGCCCCTGTAATGAGCAACCCATTCTGCCTACTGAGGTGGTATTGGGAAGCAGTAGATTGCACAAGAAGTCATCGCAGAGATCTTCAAACAGGTCAGTGGAAACTGATGTTATAGATGCCGAGGATCAGAGGTTCGAGTTCAGAGCTCCTTCATGGATCACATTTCCGAGTGTTGCTTCTTCCCAGAGGAGGAAATCCTCGGTCTCAGATGCCGATGCTGATGGGAAGAGCTCCATGGAAGCTAGAAATATGGGGAATGGTGGTGATGGGTTGAGGAGTTTGGAGGAAGAGATTGGGCCAGCTTCACCTCAAGAGAAGTTATTCTTGCAGCATAATTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009653 GO:0009786 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009986 GO:0009987 GO:0010008 GO:0010015 GO:0010016 GO:0010101 GO:0010102 GO:0010154 GO:0010311 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0022414 GO:0022622 GO:0023052 GO:0030054 GO:0030139 GO:0030154 GO:0031090 GO:0031410 GO:0031902 GO:0031982 GO:0032501 GO:0032502 GO:0032585 GO:0036211 GO:0038023 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0046983 GO:0048316 GO:0048364 GO:0048367 GO:0048439 GO:0048527 GO:0048528 GO:0048608 GO:0048646 GO:0048731 GO:0048829 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051302 GO:0051716 GO:0055044 GO:0060089 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0090567 GO:0090627 GO:0090696 GO:0090697 GO:0090698 GO:0097708 GO:0098588 GO:0098805 GO:0099402 GO:0140096 GO:1901564 GO:1905392 GO:1905393
KEGG Pathways
Metabolic & Signaling
ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr RCC1_2 TNFR_c6

Protein Analysis

835

Amino Acids

91.64

Weight (kDa)

6.26

Isoelectric Point (pI)

49.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_RLD PF25390 46 - 281 9.1e-06 RCC1-like domain
Pkinase PF00069 438 - 708 2.8e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 441 - 711 1.7e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016108)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G59420
fragaria_vesca FvH4_4g10810
malus_domestica MD04G1040500.v1.1
prunus_persica Prupe.1G194300_v2.0.a1
pyrus_communis pycom04g03540
rosa_chinensis RchiOBHm_Chr4g0406691
rosa_laevigata RLG00000008760
rosa_multiflora Rmu_sc0017281.1_g000002
rosa_roxburghii Rroxscaffold_5G00351530
rosa_rugosa Rorug04G0072900
rosa_samantha Rh4AG140300 Rh4BG137300 Rh4CG147200 Rh4DG134300
rosa_wichuraiana Rw4G011430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1080
AasI GACNNNNNNGTC 1 cut(s) 731
Acc36I ACCTGC 2 cut(s) 1503, 1786
AccB7I CCANNNNNTGG 1 cut(s) 137
AciI CCGC 5 cut(s) 504, 708, 918, 1264, 1814
AclWI GGATC 9 cut(s) 97, 493, 1564, 1684, 1829, 2009, 2022, 2295, 2327
AcoI YGGCCR 2 cut(s) 99, 1800
AcsI RAATTY 2 cut(s) 419, 1429
AcuI CTGAAG 1 cut(s) 1274
AfaI GTAC 5 cut(s) 1034, 1051, 1133, 1844, 1977
AfiI CCNNNNNNNGG 5 cut(s) 137, 317, 447, 588, 2352
AflIII ACRYGT 1 cut(s) 333
AgeI ACCGGT 1 cut(s) 769
AhlI ACTAGT 1 cut(s) 476
AjnI CCWGG 2 cut(s) 908, 1638
AjuI GAANNNNNNNTTGG 2 cut(s) 571, 603
AloI GAACNNNNNNTCC 2 cut(s) 2279, 2311
Alw21I GWGCWC 3 cut(s) 2146, 2311, 2396
Alw26I GTCTC 5 cut(s) 467, 1170, 1416, 1989, 2371
AlwI GGATC 9 cut(s) 97, 493, 1564, 1684, 1829, 2009, 2022, 2295, 2327
AlwNI CAGNNNCTG 2 cut(s) 915, 2169
Ama87I CYCGRG 1 cut(s) 1743
AoxI GGCC 5 cut(s) 99, 139, 1800, 2105, 2459
ApeKI GCWGC 7 cut(s) 530, 803, 1008, 1643, 2152, 2163, 2491
ApoI RAATTY 2 cut(s) 419, 1429
AsiGI ACCGGT 1 cut(s) 769
Asp700I GAANNNNTTC 2 cut(s) 1439, 2483
AspLEI GCGC 2 cut(s) 968, 2152
AspS9I GGNCC 4 cut(s) 667, 912, 1775, 2459
AsuHPI GGTGA 6 cut(s) 38, 164, 293, 479, 2438, 2460
AsuII TTCGAA 2 cut(s) 1433, 1618
AvaI CYCGRG 1 cut(s) 1743
AvaII GGWCC 3 cut(s) 667, 912, 1775
BamHI GGATCC 1 cut(s) 2014
BanII GRGCYC 4 cut(s) 1270, 2146, 2311, 2396
BbsI GAAGAC 1 cut(s) 1701
Bbv12I GWGCWC 3 cut(s) 2146, 2311, 2396
BbvCI CCTCAGC 1 cut(s) 1099
BbvI GCAGC 6 cut(s) 542, 790, 1020, 1655, 2139, 2175
BccI CCATC 8 cut(s) 149, 297, 380, 1370, 1701, 2116, 2378, 2423
BciT130I CCWGG 2 cut(s) 910, 1640
BclI TGATCA 1 cut(s) 1983
BcoDI GTCTC 5 cut(s) 467, 1170, 1416, 1989, 2371
BcuI ACTAGT 1 cut(s) 476
BfaI CTAG 6 cut(s) 477, 576, 1454, 1647, 1823, 2406
BfmI CTRYAG 4 cut(s) 1006, 1779, 1846, 2127
BfoI RGCGCY 1 cut(s) 969
BfuAI ACCTGC 2 cut(s) 1503, 1786
BglII AGATCT 1 cut(s) 2243
BisI GCNGC 8 cut(s) 531, 804, 919, 1009, 1644, 2153, 2164, 2492
BlsI GCNGC 8 cut(s) 532, 805, 920, 1010, 1645, 2154, 2165, 2493
BmcAI AGTACT 1 cut(s) 1844
Bme1390I CCNGG 2 cut(s) 910, 1640
Bme18I GGWCC 3 cut(s) 667, 912, 1775
BmeT110I CYCGRG 1 cut(s) 1743
BmgT120I GGNCC 4 cut(s) 667, 912, 1775, 2459
BmiI GGNNCC 8 cut(s) 115, 323, 660, 669, 774, 922, 1776, 2016
BmrFI CCNGG 2 cut(s) 910, 1640
BmrI ACTGGG 1 cut(s) 1621
BmsI GCATC 5 cut(s) 244, 384, 2269, 2362, 2368
BmuI ACTGGG 1 cut(s) 1621
BpiI GAAGAC 1 cut(s) 1701
BplI GAGNNNNNCTC 2 cut(s) 295, 327
BpmI CTGGAG 1 cut(s) 1450
Bpu10I CCTNAGC 1 cut(s) 1099
Bpu14I TTCGAA 2 cut(s) 1433, 1618
BpuEI CTTGAG 2 cut(s) 1615, 2457
BsaBI GATNNNNATC 1 cut(s) 288
BsaI GGTCTC 2 cut(s) 1170, 2371
BsaJI CCNNGG 7 cut(s) 727, 777, 908, 1576, 2283, 2361, 2397
BsaWI WCCGGW 1 cut(s) 769
BsaXI ACNNNNNCTCC 2 cut(s) 1448, 1478
Bsc4I CCNNNNNNNGG 5 cut(s) 137, 317, 447, 588, 2352
Bse118I RCCGGY 2 cut(s) 533, 769
Bse1I ACTGG 5 cut(s) 1018, 1296, 1616, 1685, 2018
Bse3DI GCAATG 4 cut(s) 9, 652, 798, 1559
Bse8I GATNNNNATC 1 cut(s) 288
BseBI CCWGG 2 cut(s) 910, 1640
BseDI CCNNGG 7 cut(s) 727, 777, 908, 1576, 2283, 2361, 2397
BseGI GGATG 2 cut(s) 1252, 2094
BseJI GATNNNNATC 1 cut(s) 288
BseLI CCNNNNNNNGG 5 cut(s) 137, 317, 447, 588, 2352
BseMI GCAATG 4 cut(s) 9, 652, 798, 1559
BseNI ACTGG 5 cut(s) 1018, 1296, 1616, 1685, 2018
BseRI GAGGAG 4 cut(s) 1102, 1339, 2365, 2452
BseXI GCAGC 6 cut(s) 542, 790, 1020, 1655, 2139, 2175
BseYI CCCAGC 2 cut(s) 462, 741
BsgI GTGCAG 1 cut(s) 57
BshFI GGCC 5 cut(s) 101, 141, 1802, 2107, 2461
BshTI ACCGGT 1 cut(s) 769
BsiHKAI GWGCWC 3 cut(s) 2146, 2311, 2396
BsiHKCI CYCGRG 1 cut(s) 1743
BsiSI CCGG 3 cut(s) 534, 770, 807
BslFI GGGAC 3 cut(s) 218, 1788, 1831
BslI CCNNNNNNNGG 5 cut(s) 137, 317, 447, 588, 2352
BsmAI GTCTC 5 cut(s) 467, 1170, 1416, 1989, 2371
BsmFI GGGAC 3 cut(s) 218, 1788, 1831
BsmI GAATGC 1 cut(s) 1112
BsnI GGCC 5 cut(s) 101, 141, 1802, 2107, 2461
Bso31I GGTCTC 2 cut(s) 1170, 2371
BsoBI CYCGRG 1 cut(s) 1743
Bsp119I TTCGAA 2 cut(s) 1433, 1618
Bsp1286I GDGCHC 4 cut(s) 1270, 2146, 2311, 2396
Bsp1407I TGTACA 1 cut(s) 1049
Bsp19I CCATGG 3 cut(s) 727, 1576, 2397
BspACI CCGC 5 cut(s) 504, 708, 918, 1264, 1814
BspANI GGCC 5 cut(s) 101, 141, 1802, 2107, 2461
BspLI GGNNCC 8 cut(s) 115, 323, 660, 669, 774, 922, 1776, 2016
BspMAI CTGCAG 2 cut(s) 1010, 1783
BspMI ACCTGC 2 cut(s) 1503, 1786
BspPI GGATC 9 cut(s) 97, 493, 1564, 1684, 1829, 2009, 2022, 2295, 2327
BspQI GCTCTTC 1 cut(s) 2384
BspT104I TTCGAA 2 cut(s) 1433, 1618
BspTNI GGTCTC 2 cut(s) 1170, 2371
BsrDI GCAATG 4 cut(s) 9, 652, 798, 1559
BsrFI RCCGGY 2 cut(s) 533, 769
BsrGI TGTACA 1 cut(s) 1049
BsrI ACTGG 5 cut(s) 1018, 1296, 1616, 1685, 2018
BssAI RCCGGY 2 cut(s) 533, 769
BssECI CCNNGG 7 cut(s) 727, 777, 908, 1576, 2283, 2361, 2397
BssT1I CCWWGG 4 cut(s) 727, 777, 1576, 2397
Bst2UI CCWGG 2 cut(s) 910, 1640
Bst4CI ACNGT 6 cut(s) 47, 454, 1071, 1085, 1121, 1384
Bst6I CTCTTC 5 cut(s) 891, 1314, 1615, 2384, 2445
BstAPI GCANNNNNTGC 2 cut(s) 1005, 2069
BstAUI TGTACA 1 cut(s) 1049
BstBI TTCGAA 2 cut(s) 1433, 1618
BstC8I GCNNGC 6 cut(s) 706, 1001, 1266, 1678, 2074, 2463
BstDSI CCRYGG 3 cut(s) 727, 1576, 2397
BstENI CCTNNNNNAGG 1 cut(s) 315
BstF5I GGATG 2 cut(s) 1252, 2094
BstH2I RGCGCY 1 cut(s) 969
BstHHI GCGC 2 cut(s) 968, 2152
BstMAI GTCTC 5 cut(s) 467, 1170, 1416, 1989, 2371
BstNI CCWGG 2 cut(s) 910, 1640
BstNSI RCATGY 3 cut(s) 337, 1003, 1423
BstSCI CCNGG 2 cut(s) 908, 1638
BstSFI CTRYAG 4 cut(s) 1006, 1779, 1846, 2127
BstV1I GCAGC 6 cut(s) 542, 790, 1020, 1655, 2139, 2175
BstV2I GAAGAC 1 cut(s) 1701
BstX2I RGATCY 2 cut(s) 2014, 2243
BstXI CCANNNNNNTGG 2 cut(s) 201, 296
BstYI RGATCY 2 cut(s) 2014, 2243
BsuRI GGCC 5 cut(s) 101, 141, 1802, 2107, 2461
BtgI CCRYGG 3 cut(s) 727, 1576, 2397
BtgZI GCGATG 1 cut(s) 2220
BtsCI GGATG 2 cut(s) 1252, 2094
BtsI GCAGTG 1 cut(s) 217
BtsIMutI CAGTG 7 cut(s) 217, 280, 630, 1011, 1076, 1692, 2265
BveI ACCTGC 2 cut(s) 1503, 1786
Cac8I GCNNGC 6 cut(s) 706, 1001, 1266, 1678, 2074, 2463
CaiI CAGNNNCTG 2 cut(s) 915, 2169
CfoI GCGC 2 cut(s) 968, 2152
Cfr10I RCCGGY 2 cut(s) 533, 769
Cfr13I GGNCC 4 cut(s) 667, 912, 1775, 2459
Csp6I GTAC 5 cut(s) 1033, 1050, 1132, 1843, 1976
CspAI ACCGGT 1 cut(s) 769
CviQI GTAC 5 cut(s) 1033, 1050, 1132, 1843, 1976
DrdI GACNNNNNNGTC 1 cut(s) 731
DseDI GACNNNNNNGTC 1 cut(s) 731
EaeI YGGCCR 2 cut(s) 99, 1800
Eam1104I CTCTTC 5 cut(s) 891, 1314, 1615, 2384, 2445
EarI CTCTTC 5 cut(s) 891, 1314, 1615, 2384, 2445
Ecl136II GAGCTC 3 cut(s) 2144, 2309, 2394
Eco130I CCWWGG 4 cut(s) 727, 777, 1576, 2397
Eco24I GRGCYC 4 cut(s) 1270, 2146, 2311, 2396
Eco31I GGTCTC 2 cut(s) 1170, 2371
Eco32I GATATC 1 cut(s) 542
Eco47I GGWCC 3 cut(s) 667, 912, 1775
Eco53kI GAGCTC 3 cut(s) 2144, 2309, 2394
Eco57I CTGAAG 1 cut(s) 1274
Eco88I CYCGRG 1 cut(s) 1743
EcoICRI GAGCTC 3 cut(s) 2144, 2309, 2394
EcoNI CCTNNNNNAGG 1 cut(s) 315
EcoO109I RGGNCCY 3 cut(s) 667, 912, 1775
EcoRI GAATTC 2 cut(s) 419, 1429
EcoRII CCWGG 2 cut(s) 908, 1638
EcoRV GATATC 1 cut(s) 542
EcoT14I CCWWGG 4 cut(s) 727, 777, 1576, 2397
EcoT38I GRGCYC 4 cut(s) 1270, 2146, 2311, 2396
ErhI CCWWGG 4 cut(s) 727, 777, 1576, 2397
FalI AAGNNNNNCTT 6 cut(s) 1288, 1320, 1328, 1360, 2471, 2503
FaqI GGGAC 3 cut(s) 218, 1788, 1831
FauI CCCGC 3 cut(s) 511, 1257, 1807
FauNDI CATATG 1 cut(s) 109
FbaI TGATCA 1 cut(s) 1983
Fnu4HI GCNGC 8 cut(s) 531, 804, 919, 1009, 1644, 2153, 2164, 2492
FokI GGATG 2 cut(s) 1259, 2101
FriOI GRGCYC 4 cut(s) 1270, 2146, 2311, 2396
Fsp4HI GCNGC 8 cut(s) 531, 804, 919, 1009, 1644, 2153, 2164, 2492
FspBI CTAG 6 cut(s) 477, 576, 1454, 1647, 1823, 2406
GlaI GCGC 2 cut(s) 967, 2151
GluI GCNGC 8 cut(s) 531, 804, 919, 1009, 1644, 2153, 2164, 2492
GsaI CCCAGC 2 cut(s) 466, 745
GsuI CTGGAG 1 cut(s) 1450
HaeII RGCGCY 1 cut(s) 969
HaeIII GGCC 5 cut(s) 101, 141, 1802, 2107, 2461
HapII CCGG 3 cut(s) 534, 770, 807
HhaI GCGC 2 cut(s) 968, 2152
Hin6I GCGC 2 cut(s) 966, 2150
HinP1I GCGC 2 cut(s) 966, 2150
HindIII AAGCTT 2 cut(s) 598, 1342
HinfI GANTC 9 cut(s) 182, 711, 829, 1231, 1322, 1623, 1819, 1909, 1949
HpaII CCGG 3 cut(s) 534, 770, 807
HphI GGTGA 6 cut(s) 38, 164, 293, 479, 2438, 2460
Hpy166II GTNNAC 2 cut(s) 43, 1278
Hpy8I GTNNAC 2 cut(s) 43, 1278
HpyAV CCTTC 3 cut(s) 658, 1508, 2322
HpyCH4III ACNGT 6 cut(s) 47, 454, 1071, 1085, 1121, 1384
HspAI GCGC 2 cut(s) 966, 2150
Ksp22I TGATCA 1 cut(s) 1983
LguI GCTCTTC 1 cut(s) 2384
LmnI GCTCC 6 cut(s) 321, 664, 926, 1115, 2314, 2399
Lsp1109I GCAGC 6 cut(s) 542, 790, 1020, 1655, 2139, 2175
LweI GCATC 5 cut(s) 244, 384, 2269, 2362, 2368
MaeI CTAG 6 cut(s) 477, 576, 1454, 1647, 1823, 2406
MaeIII GTNAC 4 cut(s) 1624, 1670, 1764, 2122
MfeI CAATTG 5 cut(s) 424, 681, 1172, 1604, 1629
MflI RGATCY 2 cut(s) 2014, 2243
MhlI GDGCHC 4 cut(s) 1270, 2146, 2311, 2396
MlyI GAGTC 3 cut(s) 1331, 1632, 1813
MmeI TCCRAC 2 cut(s) 902, 1884
MroXI GAANNNNTTC 2 cut(s) 1439, 2483
MseI TTAA 6 cut(s) 53, 59, 249, 1472, 1704, 2503
MslI CAYNNNNRTG 5 cut(s) 294, 549, 998, 1575, 1934
MspA1I CMGCKG 3 cut(s) 899, 1103, 1814
MspI CCGG 3 cut(s) 534, 770, 807
MspR9I CCNGG 2 cut(s) 910, 1640
MunI CAATTG 5 cut(s) 424, 681, 1172, 1604, 1629
Mva1269I GAATGC 1 cut(s) 1112
MvaI CCWGG 2 cut(s) 910, 1640
NcoI CCATGG 3 cut(s) 727, 1576, 2397
NdeI CATATG 1 cut(s) 109
NlaIV GGNNCC 8 cut(s) 115, 323, 660, 669, 774, 922, 1776, 2016
NmeAIII GCCGAG 3 cut(s) 77, 1828, 2308
NmuCI GTSAC 3 cut(s) 1624, 1764, 2122
NspI RCATGY 3 cut(s) 337, 1003, 1423
NspV TTCGAA 2 cut(s) 1433, 1618
PaeI GCATGC 1 cut(s) 1003
PaeR7I CTCGAG 1 cut(s) 1743
PciI ACATGT 1 cut(s) 333
PciSI GCTCTTC 1 cut(s) 2384
PctI GAATGC 1 cut(s) 1112
PdmI GAANNNNTTC 2 cut(s) 1439, 2483
PfeI GAWTC 6 cut(s) 182, 711, 829, 1231, 1909, 1949
PflMI CCANNNNNTGG 1 cut(s) 137
PinAI ACCGGT 1 cut(s) 769
PkrI GCNGC 8 cut(s) 532, 805, 920, 1010, 1645, 2154, 2165, 2493
PleI GAGTC 3 cut(s) 1330, 1631, 1813
PpsI GAGTC 3 cut(s) 1330, 1631, 1813
PpuMI RGGWCCY 3 cut(s) 667, 912, 1775
PscI ACATGT 1 cut(s) 333
PsiI TTATAA 1 cut(s) 1080
Psp124BI GAGCTC 3 cut(s) 2146, 2311, 2396
Psp5II RGGWCCY 3 cut(s) 667, 912, 1775
Psp6I CCWGG 2 cut(s) 908, 1638
PspFI CCCAGC 2 cut(s) 462, 741
PspGI CCWGG 2 cut(s) 908, 1638
PspN4I GGNNCC 8 cut(s) 115, 323, 660, 669, 774, 922, 1776, 2016
PspPI GGNCC 4 cut(s) 667, 912, 1775, 2459
PspPPI RGGWCCY 3 cut(s) 667, 912, 1775
PspXI VCTCGAGB 1 cut(s) 1743
PstI CTGCAG 2 cut(s) 1010, 1783
PstNI CAGNNNCTG 2 cut(s) 915, 2169
PsuI RGATCY 2 cut(s) 2014, 2243
PvuII CAGCTG 2 cut(s) 899, 1103
RsaI GTAC 5 cut(s) 1034, 1051, 1133, 1844, 1977
RsaNI GTAC 5 cut(s) 1033, 1050, 1132, 1843, 1976
RseI CAYNNNNRTG 5 cut(s) 294, 549, 998, 1575, 1934
SacI GAGCTC 3 cut(s) 2146, 2311, 2396
SapI GCTCTTC 1 cut(s) 2384
SaqAI TTAA 6 cut(s) 53, 59, 249, 1472, 1704, 2503
SatI GCNGC 8 cut(s) 531, 804, 919, 1009, 1644, 2153, 2164, 2492
Sau96I GGNCC 4 cut(s) 667, 912, 1775, 2459
ScaI AGTACT 1 cut(s) 1844
SchI GAGTC 3 cut(s) 1331, 1632, 1813
ScrFI CCNGG 2 cut(s) 910, 1640
SduI GDGCHC 4 cut(s) 1270, 2146, 2311, 2396
SfaNI GCATC 5 cut(s) 244, 384, 2269, 2362, 2368
SfcI CTRYAG 4 cut(s) 1006, 1779, 1846, 2127
Sfr274I CTCGAG 1 cut(s) 1743
SfuI TTCGAA 2 cut(s) 1433, 1618
SinI GGWCC 3 cut(s) 667, 912, 1775
SlaI CTCGAG 1 cut(s) 1743
SmiMI CAYNNNNRTG 5 cut(s) 294, 549, 998, 1575, 1934
SmlI CTYRAG 3 cut(s) 1594, 1743, 2472
SmoI CTYRAG 3 cut(s) 1594, 1743, 2472
SpeI ACTAGT 1 cut(s) 476
SphI GCATGC 1 cut(s) 1003
SsiI CCGC 5 cut(s) 504, 708, 918, 1264, 1814
SspMI CTAG 6 cut(s) 477, 576, 1454, 1647, 1823, 2406
SstI GAGCTC 3 cut(s) 2146, 2311, 2396
StyD4I CCNGG 2 cut(s) 908, 1638
StyI CCWWGG 4 cut(s) 727, 777, 1576, 2397
TaaI ACNGT 6 cut(s) 47, 454, 1071, 1085, 1121, 1384
TaqI TCGA 6 cut(s) 345, 1433, 1618, 1696, 1744, 2298
TaqII GACCGA 1 cut(s) 2353
TatI WGTACW 2 cut(s) 1049, 1842
TauI GCSGC 1 cut(s) 921
TfiI GAWTC 6 cut(s) 182, 711, 829, 1231, 1909, 1949
Tru1I TTAA 6 cut(s) 53, 59, 249, 1472, 1704, 2503
Tru9I TTAA 6 cut(s) 53, 59, 249, 1472, 1704, 2503
TscAI CASTG 7 cut(s) 217, 280, 630, 1018, 1076, 1692, 2265
TseFI GTSAC 3 cut(s) 1624, 1764, 2122
TseI GCWGC 7 cut(s) 530, 803, 1008, 1643, 2152, 2163, 2491
Tsp45I GTSAC 3 cut(s) 1624, 1764, 2122
TspDTI ATGAA 8 cut(s) 689, 770, 963, 1116, 1167, 1534, 1959, 2304
TspRI CASTG 7 cut(s) 217, 280, 630, 1018, 1076, 1692, 2265
Van91I CCANNNNNTGG 1 cut(s) 137
VpaK11BI GGWCC 3 cut(s) 667, 912, 1775
XagI CCTNNNNNAGG 1 cut(s) 315
XapI RAATTY 2 cut(s) 419, 1429
XbaI TCTAGA 1 cut(s) 575
XceI RCATGY 3 cut(s) 337, 1003, 1423
XcmI CCANNNNNNNNNTGG 1 cut(s) 1574
XhoI CTCGAG 1 cut(s) 1743
XmnI GAANNNNTTC 2 cut(s) 1439, 2483
XspI CTAG 6 cut(s) 477, 576, 1454, 1647, 1823, 2406
ZrmI AGTACT 1 cut(s) 1844
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.