RchiOBHm_Chr4g0430051

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
54709627 .. 54709983
357 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ39881

Sequence Viewer

Length: 168 bp
ATGGAGGATGTAGAGAAACCAAACTTGGCAGACTTTTCTCCTGTGCTCAGGAAGCTTGACCCTCAAGGCATCAGGCGGCACCTGGCCAATTATTTCCAGAAAACGGTGGTCTACTTCGACCACCTGATCAATCAAAGGTTGGACTCAAGAAGAAGAGGGCATGAGTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

55

Amino Acids

6.62

Weight (kDa)

9.39

Isoelectric Point (pI)

64.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019742)

Species Orthologous Gene IDs
malus_domestica MD06G1131100.v1.1 MD13G1115800.v1.1
rosa_chinensis RchiOBHm_Chr4g0430051
rosa_laevigata RLG00000007009
rosa_rugosa Rorug04G0239800
rosa_samantha Rh4BG303300 Rh4CG318800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 78
AccI GTMKAC 1 cut(s) 111
AciI CCGC 1 cut(s) 76
AcoI YGGCCR 1 cut(s) 84
AfiI CCNNNNNNNGG 1 cut(s) 103
AjnI CCWGG 1 cut(s) 81
AjuI GAANNNNNNNTTGG 2 cut(s) 8, 40
AluBI AGCT 1 cut(s) 55
AluI AGCT 1 cut(s) 55
Alw21I GWGCWC 1 cut(s) 48
AoxI GGCC 1 cut(s) 84
BalI TGGCCA 1 cut(s) 86
BanI GGYRCC 1 cut(s) 78
Bbv12I GWGCWC 1 cut(s) 48
BciT130I CCWGG 1 cut(s) 83
BclI TGATCA 1 cut(s) 126
BisI GCNGC 1 cut(s) 77
BlsI GCNGC 1 cut(s) 78
Bme1390I CCNGG 1 cut(s) 83
BmiI GGNNCC 1 cut(s) 80
BmrFI CCNGG 1 cut(s) 83
BmsI GCATC 1 cut(s) 78
Bpu10I CCTNAGC 1 cut(s) 47
BpuEI CTTGAG 2 cut(s) 48, 130
Bsc4I CCNNNNNNNGG 1 cut(s) 103
BseBI CCWGG 1 cut(s) 83
BseGI GGATG 1 cut(s) 13
BseLI CCNNNNNNNGG 1 cut(s) 103
BseMII CTCAG 1 cut(s) 61
BshFI GGCC 1 cut(s) 86
BshNI GGYRCC 1 cut(s) 78
BsiHKAI GWGCWC 1 cut(s) 48
BslI CCNNNNNNNGG 1 cut(s) 103
BsnI GGCC 1 cut(s) 86
Bsp1286I GDGCHC 1 cut(s) 48
Bsp143I GATC 1 cut(s) 126
BspACI CCGC 1 cut(s) 76
BspANI GGCC 1 cut(s) 86
BspCNI CTCAG 1 cut(s) 60
BspLI GGNNCC 1 cut(s) 80
BspT107I GGYRCC 1 cut(s) 78
BssMI GATC 1 cut(s) 126
Bst2UI CCWGG 1 cut(s) 83
Bst4CI ACNGT 1 cut(s) 106
Bst6I CTCTTC 1 cut(s) 148
BstDEI CTNAG 1 cut(s) 47
BstF5I GGATG 1 cut(s) 13
BstKTI GATC 1 cut(s) 129
BstMBI GATC 1 cut(s) 126
BstMWI GCNNNNNNNGC 1 cut(s) 52
BstNI CCWGG 1 cut(s) 83
BstSCI CCNGG 1 cut(s) 81
BsuRI GGCC 1 cut(s) 86
BtsCI GGATG 1 cut(s) 13
CviAII CATG 1 cut(s) 161
CviJI RGCY 2 cut(s) 55, 86
CviKI_1 RGCY 2 cut(s) 55, 86
DdeI CTNAG 1 cut(s) 47
DpnI GATC 1 cut(s) 128
DpnII GATC 1 cut(s) 126
EaeI YGGCCR 1 cut(s) 84
Eam1104I CTCTTC 1 cut(s) 148
EarI CTCTTC 1 cut(s) 148
EcoRII CCWGG 1 cut(s) 81
FaeI CATG 1 cut(s) 164
FaiI YATR 1 cut(s) 162
FatI CATG 1 cut(s) 160
FbaI TGATCA 1 cut(s) 126
FblI GTMKAC 1 cut(s) 111
Fnu4HI GCNGC 1 cut(s) 77
FokI GGATG 1 cut(s) 20
Fsp4HI GCNGC 1 cut(s) 77
GluI GCNGC 1 cut(s) 77
HaeIII GGCC 1 cut(s) 86
Hin1II CATG 1 cut(s) 164
HindIII AAGCTT 1 cut(s) 53
HinfI GANTC 1 cut(s) 143
Hpy166II GTNNAC 1 cut(s) 112
Hpy188III TCNNGA 3 cut(s) 49, 97, 147
Hpy8I GTNNAC 1 cut(s) 112
HpyCH4III ACNGT 1 cut(s) 106
HpyF10VI GCNNNNNNNGC 1 cut(s) 52
HpyF3I CTNAG 1 cut(s) 47
Hsp92II CATG 1 cut(s) 164
Ksp22I TGATCA 1 cut(s) 126
Kzo9I GATC 1 cut(s) 126
LpnPI CCDG 7 cut(s) 34, 54, 58, 68, 95, 110, 137
LweI GCATC 1 cut(s) 78
MalI GATC 1 cut(s) 128
MboI GATC 1 cut(s) 126
MboII GAAGA 2 cut(s) 162, 165
MhlI GDGCHC 1 cut(s) 48
MlsI TGGCCA 1 cut(s) 86
MluCI AATT 1 cut(s) 88
MluNI TGGCCA 1 cut(s) 86
MlyI GAGTC 1 cut(s) 137
MmeI TCCRAC 1 cut(s) 120
MnlI CCTC 2 cut(s) 72, 149
Mox20I TGGCCA 1 cut(s) 86
MscI TGGCCA 1 cut(s) 86
Msp20I TGGCCA 1 cut(s) 86
MspR9I CCNGG 1 cut(s) 83
MvaI CCWGG 1 cut(s) 83
MwoI GCNNNNNNNGC 1 cut(s) 52
NdeII GATC 1 cut(s) 126
NlaIII CATG 1 cut(s) 164
NlaIV GGNNCC 1 cut(s) 80
PkrI GCNGC 1 cut(s) 78
PleI GAGTC 1 cut(s) 137
PpsI GAGTC 1 cut(s) 137
Psp6I CCWGG 1 cut(s) 81
PspGI CCWGG 1 cut(s) 81
PspN4I GGNNCC 1 cut(s) 80
SatI GCNGC 1 cut(s) 77
Sau3AI GATC 1 cut(s) 126
SchI GAGTC 1 cut(s) 137
ScrFI CCNGG 1 cut(s) 83
SduI GDGCHC 1 cut(s) 48
SetI ASST 4 cut(s) 57, 84, 126, 140
SfaNI GCATC 1 cut(s) 78
SmlI CTYRAG 2 cut(s) 63, 145
SmoI CTYRAG 2 cut(s) 63, 145
Sse9I AATT 1 cut(s) 88
SsiI CCGC 1 cut(s) 76
StyD4I CCNGG 1 cut(s) 81
TaaI ACNGT 1 cut(s) 106
TaqI TCGA 1 cut(s) 117
TasI AATT 1 cut(s) 88
TauI GCSGC 1 cut(s) 79
XmiI GTMKAC 1 cut(s) 111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.