E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G50440 AT1G50440 AT1G50440 AT1G50440 AT1G50440 |
| fragaria_vesca | FvH4_6g37040 FvH4_6g37040 FvH4_6g37040 |
| malus_domestica | MD09G1164700.v1.1 MD17G1163500.v1.1 |
| prunus_persica | Prupe.3G022100_v2.0.a1 Prupe.3G022100_v2.0.a1 Prupe.3G022100_v2.0.a1 |
| pyrus_communis | pycom09g08190 pycom17g15630 |
| rosa_chinensis | RchiOBHm_Chr2g0149591 RchiOBHm_Chr5g0010901 |
| rosa_laevigata | RLG00000020427 |
| rosa_multiflora | Rmu_sc0006867.1_g000024 |
| rosa_roxburghii | Rroxscaffold_2G00097940 |
| rosa_rugosa | Rorug02G0412700.1 Rorug02G0412800 Rorug02G0413100 |
| rosa_samantha | Rh2AG473200 Rh2BG485200 Rh2CG459000 Rh2DG494400 Rh6CG204700 |
| rosa_wichuraiana | Rw2G038590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 60 |
| AcuI | CTGAAG | 1 cut(s) | 182 |
| AfaI | GTAC | 1 cut(s) | 167 |
| AflII | CTTAAG | 1 cut(s) | 170 |
| AgsI | TTSAA | 1 cut(s) | 29 |
| AsuHPI | GGTGA | 1 cut(s) | 193 |
| BccI | CCATC | 2 cut(s) | 49, 124 |
| BfrI | CTTAAG | 1 cut(s) | 170 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 42, 72 |
| BseMII | CTCAG | 1 cut(s) | 201 |
| BseRI | GAGGAG | 1 cut(s) | 92 |
| BsmI | GAATGC | 1 cut(s) | 41 |
| BspCNI | CTCAG | 1 cut(s) | 202 |
| BspTI | CTTAAG | 1 cut(s) | 170 |
| BssNAI | GTATAC | 1 cut(s) | 61 |
| Bst1107I | GTATAC | 1 cut(s) | 61 |
| BstAFI | CTTAAG | 1 cut(s) | 170 |
| BstC8I | GCNNGC | 1 cut(s) | 151 |
| BstDEI | CTNAG | 1 cut(s) | 210 |
| BstZ17I | GTATAC | 1 cut(s) | 61 |
| Cac8I | GCNNGC | 1 cut(s) | 151 |
| Csp6I | GTAC | 1 cut(s) | 166 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 52, 87 |
| CviJI | RGCY | 2 cut(s) | 134, 153 |
| CviKI_1 | RGCY | 2 cut(s) | 134, 153 |
| CviQI | GTAC | 1 cut(s) | 166 |
| DdeI | CTNAG | 1 cut(s) | 210 |
| Eco57I | CTGAAG | 1 cut(s) | 182 |
| FauNDI | CATATG | 1 cut(s) | 115 |
| FblI | GTMKAC | 1 cut(s) | 60 |
| HphI | GGTGA | 1 cut(s) | 193 |
| Hpy166II | GTNNAC | 1 cut(s) | 61 |
| Hpy188I | TCNGA | 1 cut(s) | 162 |
| Hpy8I | GTNNAC | 1 cut(s) | 61 |
| HpyF3I | CTNAG | 1 cut(s) | 210 |
| LpnPI | CCDG | 2 cut(s) | 120, 135 |
| MaeIII | GTNAC | 2 cut(s) | 81, 199 |
| MboII | GAAGA | 1 cut(s) | 116 |
| MnlI | CCTC | 2 cut(s) | 70, 168 |
| MseI | TTAA | 1 cut(s) | 171 |
| MslI | CAYNNNNRTG | 1 cut(s) | 114 |
| MspCI | CTTAAG | 1 cut(s) | 170 |
| Mva1269I | GAATGC | 1 cut(s) | 41 |
| NdeI | CATATG | 1 cut(s) | 115 |
| NmuCI | GTSAC | 1 cut(s) | 199 |
| PctI | GAATGC | 1 cut(s) | 41 |
| RsaI | GTAC | 1 cut(s) | 167 |
| RsaNI | GTAC | 1 cut(s) | 166 |
| RseI | CAYNNNNRTG | 1 cut(s) | 114 |
| SaqAI | TTAA | 1 cut(s) | 171 |
| SetI | ASST | 1 cut(s) | 171 |
| SgeI | CNNG | 5 cut(s) | 58, 76, 98, 147, 162 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 114 |
| SmlI | CTYRAG | 1 cut(s) | 170 |
| SmoI | CTYRAG | 1 cut(s) | 170 |
| Tru1I | TTAA | 1 cut(s) | 171 |
| Tru9I | TTAA | 1 cut(s) | 171 |
| TseFI | GTSAC | 1 cut(s) | 199 |
| Tsp45I | GTSAC | 1 cut(s) | 199 |
| TspDTI | ATGAA | 1 cut(s) | 117 |
| Vha464I | CTTAAG | 1 cut(s) | 170 |
| XmiI | GTMKAC | 1 cut(s) | 60 |