Nucleolar pre-ribosomal-associated protein 1
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0039171 RchiOBHm_Chr5g0039221 |
| rosa_multiflora | Rmu_co8491797.1_g000001 Rmu_sc0000533.1_g000005 |
| rosa_samantha | Rh5AG263700 Rh5CG301500 Rh5DG276400 |
| rosa_wichuraiana | Rw5G024730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 446 |
| AciI | CCGC | 3 cut(s) | 5, 204, 417 |
| AclWI | GGATC | 2 cut(s) | 245, 258 |
| AcsI | RAATTY | 1 cut(s) | 169 |
| AgsI | TTSAA | 2 cut(s) | 265, 371 |
| AjiI | CACGTC | 1 cut(s) | 247 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 242, 274 |
| AluBI | AGCT | 4 cut(s) | 17, 46, 226, 376 |
| AluI | AGCT | 4 cut(s) | 17, 46, 226, 376 |
| AlwI | GGATC | 2 cut(s) | 245, 258 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 95 |
| AoxI | GGCC | 1 cut(s) | 316 |
| ApoI | RAATTY | 1 cut(s) | 169 |
| AspS9I | GGNCC | 1 cut(s) | 316 |
| AsuHPI | GGTGA | 1 cut(s) | 50 |
| BamHI | GGATCC | 1 cut(s) | 250 |
| BbsI | GAAGAC | 1 cut(s) | 419 |
| BccI | CCATC | 2 cut(s) | 29, 412 |
| BfuAI | ACCTGC | 1 cut(s) | 446 |
| BisI | GCNGC | 2 cut(s) | 5, 417 |
| BlsI | GCNGC | 2 cut(s) | 6, 418 |
| BmgBI | CACGTC | 1 cut(s) | 247 |
| BmgT120I | GGNCC | 1 cut(s) | 316 |
| BmiI | GGNNCC | 2 cut(s) | 252, 317 |
| BmsI | GCATC | 1 cut(s) | 359 |
| BpiI | GAAGAC | 1 cut(s) | 419 |
| BsaWI | WCCGGW | 1 cut(s) | 231 |
| Bse1I | ACTGG | 2 cut(s) | 75, 240 |
| BseGI | GGATG | 1 cut(s) | 236 |
| BseMII | CTCAG | 1 cut(s) | 246 |
| BseNI | ACTGG | 2 cut(s) | 75, 240 |
| BshFI | GGCC | 1 cut(s) | 318 |
| BsiSI | CCGG | 1 cut(s) | 232 |
| BsnI | GGCC | 1 cut(s) | 318 |
| Bsp143I | GATC | 3 cut(s) | 177, 250, 342 |
| BspACI | CCGC | 3 cut(s) | 5, 204, 417 |
| BspANI | GGCC | 1 cut(s) | 318 |
| BspCNI | CTCAG | 1 cut(s) | 247 |
| BspLI | GGNNCC | 2 cut(s) | 252, 317 |
| BspMI | ACCTGC | 1 cut(s) | 446 |
| BspPI | GGATC | 2 cut(s) | 245, 258 |
| BsrI | ACTGG | 2 cut(s) | 75, 240 |
| BssMI | GATC | 3 cut(s) | 177, 250, 342 |
| Bst4CI | ACNGT | 2 cut(s) | 211, 477 |
| Bst6I | CTCTTC | 1 cut(s) | 333 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 95 |
| BstDEI | CTNAG | 2 cut(s) | 255, 422 |
| BstF5I | GGATG | 1 cut(s) | 236 |
| BstKTI | GATC | 3 cut(s) | 180, 253, 345 |
| BstMBI | GATC | 3 cut(s) | 177, 250, 342 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 86, 95, 299, 315 |
| BstNSI | RCATGY | 1 cut(s) | 306 |
| BstV2I | GAAGAC | 1 cut(s) | 419 |
| BstX2I | RGATCY | 1 cut(s) | 250 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 247 |
| BstYI | RGATCY | 1 cut(s) | 250 |
| BsuRI | GGCC | 1 cut(s) | 318 |
| BtrI | CACGTC | 1 cut(s) | 247 |
| BtsCI | GGATG | 1 cut(s) | 236 |
| BtsI | GCAGTG | 1 cut(s) | 411 |
| BtsIMutI | CAGTG | 3 cut(s) | 82, 247, 411 |
| BveI | ACCTGC | 1 cut(s) | 446 |
| CaiI | CAGNNNCTG | 1 cut(s) | 95 |
| Cfr13I | GGNCC | 1 cut(s) | 316 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 286, 321 |
| CviAII | CATG | 5 cut(s) | 61, 103, 290, 303, 346 |
| CviJI | RGCY | 7 cut(s) | 17, 46, 199, 226, 318, 376, 492 |
| CviKI_1 | RGCY | 7 cut(s) | 17, 46, 199, 226, 318, 376, 492 |
| DdeI | CTNAG | 2 cut(s) | 255, 422 |
| DpnI | GATC | 3 cut(s) | 179, 252, 344 |
| DpnII | GATC | 3 cut(s) | 177, 250, 342 |
| Eam1104I | CTCTTC | 1 cut(s) | 333 |
| EarI | CTCTTC | 1 cut(s) | 333 |
| EcoRI | GAATTC | 1 cut(s) | 169 |
| FaeI | CATG | 5 cut(s) | 64, 106, 293, 306, 349 |
| FaiI | YATR | 9 cut(s) | 30, 62, 104, 165, 291, 304, 330, 347, 453 |
| FatI | CATG | 5 cut(s) | 60, 102, 289, 302, 345 |
| Fnu4HI | GCNGC | 2 cut(s) | 5, 417 |
| FokI | GGATG | 1 cut(s) | 223 |
| Fsp4HI | GCNGC | 2 cut(s) | 5, 417 |
| GluI | GCNGC | 2 cut(s) | 5, 417 |
| HaeIII | GGCC | 1 cut(s) | 318 |
| HapII | CCGG | 1 cut(s) | 232 |
| Hin1II | CATG | 5 cut(s) | 64, 106, 293, 306, 349 |
| HindIII | AAGCTT | 2 cut(s) | 15, 224 |
| HinfI | GANTC | 2 cut(s) | 92, 119 |
| HpaII | CCGG | 1 cut(s) | 232 |
| HphI | GGTGA | 1 cut(s) | 50 |
| Hpy188III | TCNNGA | 5 cut(s) | 146, 254, 262, 381, 463 |
| HpyAV | CCTTC | 1 cut(s) | 377 |
| HpyCH4III | ACNGT | 2 cut(s) | 211, 477 |
| HpyCH4IV | ACGT | 1 cut(s) | 246 |
| HpyCH4V | TGCA | 3 cut(s) | 98, 274, 455 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 86, 95, 299, 315 |
| HpyF3I | CTNAG | 2 cut(s) | 255, 422 |
| HpySE526I | ACGT | 1 cut(s) | 246 |
| Hsp92II | CATG | 5 cut(s) | 64, 106, 293, 306, 349 |
| Kzo9I | GATC | 3 cut(s) | 177, 250, 342 |
| LpnPI | CCDG | 7 cut(s) | 88, 159, 245, 253, 267, 366, 441 |
| LweI | GCATC | 1 cut(s) | 359 |
| MaeII | ACGT | 1 cut(s) | 246 |
| MaeIII | GTNAC | 3 cut(s) | 242, 389, 409 |
| MalI | GATC | 3 cut(s) | 179, 252, 344 |
| MboI | GATC | 3 cut(s) | 177, 250, 342 |
| MboII | GAAGA | 2 cut(s) | 350, 419 |
| MflI | RGATCY | 1 cut(s) | 250 |
| MluCI | AATT | 4 cut(s) | 69, 169, 213, 357 |
| MlyI | GAGTC | 1 cut(s) | 86 |
| MnlI | CCTC | 3 cut(s) | 142, 151, 454 |
| MseI | TTAA | 1 cut(s) | 281 |
| MslI | CAYNNNNRTG | 1 cut(s) | 114 |
| MspI | CCGG | 1 cut(s) | 232 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 86, 95, 299, 315 |
| NdeII | GATC | 3 cut(s) | 177, 250, 342 |
| NlaIII | CATG | 5 cut(s) | 64, 106, 293, 306, 349 |
| NlaIV | GGNNCC | 2 cut(s) | 252, 317 |
| NmuCI | GTSAC | 2 cut(s) | 242, 409 |
| NspI | RCATGY | 1 cut(s) | 306 |
| PfeI | GAWTC | 1 cut(s) | 119 |
| PkrI | GCNGC | 2 cut(s) | 6, 418 |
| PleI | GAGTC | 1 cut(s) | 86 |
| PpsI | GAGTC | 1 cut(s) | 86 |
| PspN4I | GGNNCC | 2 cut(s) | 252, 317 |
| PspPI | GGNCC | 1 cut(s) | 316 |
| PstNI | CAGNNNCTG | 1 cut(s) | 95 |
| PsuI | RGATCY | 1 cut(s) | 250 |
| RseI | CAYNNNNRTG | 1 cut(s) | 114 |
| SaqAI | TTAA | 1 cut(s) | 281 |
| SatI | GCNGC | 2 cut(s) | 5, 417 |
| Sau3AI | GATC | 3 cut(s) | 177, 250, 342 |
| Sau96I | GGNCC | 1 cut(s) | 316 |
| SchI | GAGTC | 1 cut(s) | 86 |
| SetI | ASST | 8 cut(s) | 19, 48, 162, 228, 249, 369, 378, 460 |
| SfaNI | GCATC | 1 cut(s) | 359 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 114 |
| Sse9I | AATT | 4 cut(s) | 69, 169, 213, 357 |
| SsiI | CCGC | 3 cut(s) | 5, 204, 417 |
| TaaI | ACNGT | 2 cut(s) | 211, 477 |
| TaiI | ACGT | 1 cut(s) | 249 |
| TasI | AATT | 4 cut(s) | 69, 169, 213, 357 |
| TauI | GCSGC | 2 cut(s) | 7, 419 |
| TfiI | GAWTC | 1 cut(s) | 119 |
| Tru1I | TTAA | 1 cut(s) | 281 |
| Tru9I | TTAA | 1 cut(s) | 281 |
| TscAI | CASTG | 3 cut(s) | 82, 247, 418 |
| TseFI | GTSAC | 2 cut(s) | 242, 409 |
| Tsp45I | GTSAC | 2 cut(s) | 242, 409 |
| TspDTI | ATGAA | 3 cut(s) | 98, 132, 485 |
| TspGWI | ACGGA | 1 cut(s) | 339 |
| TspRI | CASTG | 3 cut(s) | 82, 247, 418 |
| XapI | RAATTY | 1 cut(s) | 169 |
| XceI | RCATGY | 1 cut(s) | 306 |