Basic Information
Type: gene
Physical Location & Seq
Reverse (-)
54621645 .. 54622119
PRQ33001
Length: 183 bp
ATGGAGAAGAGAGAATCAAGAGAGAGTGACCTTTTGGATGCTATGAAAGAGAGTCCAGGATTAACTGATGAAGCTTGCTTTATGGCTCTTGATTTGCTTAATACTAAAGCAAAGCAAGATTTCTTCTTGAAGATGACTCCTGAACAGCGACTTAATTGGATCACCTATAAACAAATGCAATAG
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Protein Analysis
4.96
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| At2g29880_C |
PF24769 |
12 - 57 |
1.2e-21 |
At2g29880 C-terminal domain |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0020127)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AclWI |
GGATC |
1 cut(s)
|
167 |
| AgsI |
TTSAA |
1 cut(s)
|
130 |
| AjnI |
CCWGG |
1 cut(s)
|
55 |
| AluBI |
AGCT |
1 cut(s)
|
74 |
| AluI |
AGCT |
1 cut(s)
|
74 |
| AlwI |
GGATC |
1 cut(s)
|
167 |
| AsuHPI |
GGTGA |
1 cut(s)
|
154 |
| BciT130I |
CCWGG |
1 cut(s)
|
57 |
| Bme1390I |
CCNGG |
1 cut(s)
|
57 |
| BmrFI |
CCNGG |
1 cut(s)
|
57 |
| BmsI |
GCATC |
1 cut(s)
|
28 |
| BseBI |
CCWGG |
1 cut(s)
|
57 |
| BseGI |
GGATG |
1 cut(s)
|
43 |
| Bsp143I |
GATC |
1 cut(s)
|
159 |
| BspPI |
GGATC |
1 cut(s)
|
167 |
| BssMI |
GATC |
1 cut(s)
|
159 |
| Bst2UI |
CCWGG |
1 cut(s)
|
57 |
| Bst6I |
CTCTTC |
1 cut(s)
|
2 |
| BstC8I |
GCNNGC |
1 cut(s)
|
76 |
| BstF5I |
GGATG |
1 cut(s)
|
43 |
| BstKTI |
GATC |
1 cut(s)
|
162 |
| BstMBI |
GATC |
1 cut(s)
|
159 |
| BstNI |
CCWGG |
1 cut(s)
|
57 |
| BstSCI |
CCNGG |
1 cut(s)
|
55 |
| BtsCI |
GGATG |
1 cut(s)
|
43 |
| Cac8I |
GCNNGC |
1 cut(s)
|
76 |
| CviJI |
RGCY |
2 cut(s)
|
74, 86 |
| CviKI_1 |
RGCY |
2 cut(s)
|
74, 86 |
| DpnI |
GATC |
1 cut(s)
|
161 |
| DpnII |
GATC |
1 cut(s)
|
159 |
| Eam1104I |
CTCTTC |
1 cut(s)
|
2 |
| EarI |
CTCTTC |
1 cut(s)
|
2 |
| EcoRII |
CCWGG |
1 cut(s)
|
55 |
| FaiI |
YATR |
3 cut(s)
|
44, 83, 168 |
| FokI |
GGATG |
1 cut(s)
|
50 |
| FspEI |
CC |
8 cut(s)
|
20, 42, 44, 68, 69, 142, 153, 178 |
| HindIII |
AAGCTT |
1 cut(s)
|
72 |
| HinfI |
GANTC |
3 cut(s)
|
14, 52, 136 |
| HphI |
GGTGA |
1 cut(s)
|
154 |
| Hpy188III |
TCNNGA |
4 cut(s)
|
18, 89, 127, 140 |
| HpyCH4V |
TGCA |
1 cut(s)
|
178 |
| Kzo9I |
GATC |
1 cut(s)
|
159 |
| LpnPI |
CCDG |
3 cut(s)
|
42, 69, 153 |
| LweI |
GCATC |
1 cut(s)
|
28 |
| MaeIII |
GTNAC |
1 cut(s)
|
26 |
| MalI |
GATC |
1 cut(s)
|
161 |
| MboI |
GATC |
1 cut(s)
|
159 |
| MboII |
GAAGA |
3 cut(s)
|
19, 115, 142 |
| MluCI |
AATT |
1 cut(s)
|
154 |
| MlyI |
GAGTC |
2 cut(s)
|
61, 130 |
| MseI |
TTAA |
3 cut(s)
|
62, 99, 153 |
| MspR9I |
CCNGG |
1 cut(s)
|
57 |
| MvaI |
CCWGG |
1 cut(s)
|
57 |
| NdeII |
GATC |
1 cut(s)
|
159 |
| NmuCI |
GTSAC |
1 cut(s)
|
26 |
| PfeI |
GAWTC |
1 cut(s)
|
14 |
| PfoI |
TCCNGGA |
1 cut(s)
|
55 |
| PleI |
GAGTC |
2 cut(s)
|
60, 130 |
| PpsI |
GAGTC |
2 cut(s)
|
60, 130 |
| Psp6I |
CCWGG |
1 cut(s)
|
55 |
| PspGI |
CCWGG |
1 cut(s)
|
55 |
| SaqAI |
TTAA |
3 cut(s)
|
62, 99, 153 |
| Sau3AI |
GATC |
1 cut(s)
|
159 |
| SchI |
GAGTC |
2 cut(s)
|
61, 130 |
| ScrFI |
CCNGG |
1 cut(s)
|
57 |
| SetI |
ASST |
3 cut(s)
|
33, 76, 167 |
| SfaNI |
GCATC |
1 cut(s)
|
28 |
| SgeI |
CNNG |
8 cut(s)
|
30, 68, 69, 87, 101, 128, 139, 152 |
| Sse9I |
AATT |
1 cut(s)
|
154 |
| StyD4I |
CCNGG |
1 cut(s)
|
55 |
| TasI |
AATT |
1 cut(s)
|
154 |
| TfiI |
GAWTC |
1 cut(s)
|
14 |
| Tru1I |
TTAA |
3 cut(s)
|
62, 99, 153 |
| Tru9I |
TTAA |
3 cut(s)
|
62, 99, 153 |
| TseFI |
GTSAC |
1 cut(s)
|
26 |
| Tsp45I |
GTSAC |
1 cut(s)
|
26 |
| TspDTI |
ATGAA |
2 cut(s)
|
59, 84 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.