RchiOBHm_Chr6g0292361

pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0008841
Physical Location & Seq
Forward (+)
55276735 .. 55278754
2020 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26235

Sequence Viewer

Length: 1995 bp
ATGAAGTCCCGCTTCCACTCTCTGCTCTCTGCTCAGACTCACAGACCCCAAGTCCTCCACTCACTTCATCAGCGACCAATCTCAGCCAATAAACCCAAATGGAACTCCAAGACCAACGTCATAATCACCAACCCAACTCTGCTCATCATGGAGTCTTGCACCAACATGCTCCAGTTGAAGCAAATTCAAGCCCAAATGACCTGCACTGGCCTCATTCACCACACCTTTCCCGTCAGCAGAGTCCTAGCCTTCTGTGCTATCGCCGACGGCGGCGACATTCACTACGCTAATCTTATTTTCACGCGCATTGAAAAACCCAATACTTATATGTGGAACACAATGATCAGAGGCTACTCCAAAGCTCAAGTTAACACAACTGGATTCTCATTTTTCGGCCGAATGGTCCGCGAACGCGTCGAAATGGACTGCCGGAGTTTTGTCTTTGCGCTTAAGGCATGTGGGTTGCTGGGAGATTCGGTACATTGCGTGATTTGGAAGATGGGTTTTGGTTCTGACTTGCTGGTACGAAATGGGTTGGTGCATTATTATGCTGAAGCCGGGTCCGTGAGTCATGCACGGAAGGTGTTCGATGAAAGTCCTGTGAGGGATGTTGTAACTTGGACCACCATGATTGATGGGTATGCGGGGTGTGGTTATTCGAATGAGGCTGTGGAGTTGTTTGATGAGATGTTGTTCAGTGATGTTGAGCCAAATGAGGTTACCATGATTGCAGTGCTTTCGGCGTGTTCGAATAAGGGGGATATTGGTATGGGGAAGAGTATTCACGAGTATGTGCGAAAGAAGAATGTGAACTGTAGCTTGAATTTGCTTAATGCTTTGTTGGATATGTATGTGAAATGTGGTTGTTTGACTGCGGCGAAAGAGGTTTTTGATGACATGAAAGTGAGGGATGTGTTTACATGGACTAGCATGGTTAATGGATATGCTAAATGCGGCGAGTTAGACGCTGCAAGACAGTTTTTTAATGACATGCCTGACAGGAATGTAGTATCTTGGAATGCGATGATTGCTGGTTATGCTCAGAACAATCAACCTACTGAAGCGGTGAAGTTGTTTCATGACATGGTGGAGTCGGGTTTTGCTCCGATAGAGAACAGTTTAGTATGTGTGCTCTCTGCTTGCGGTCAGTTAAGTTGCCTGGATTTGGGTCGGTGGATTCACCAGTATTATGTCCATGGAAATCATATTCAACTTGGTGTGATTTTGGGGAATGCGTTGATAGACATGTATGCTAAGTGTGGGTGTTTAACTTCTGCTACAGAACTTTTCAATGAAATGCCAGAGAAAAATTTGGTTTCTTGGAATACGATGATTGCTGGATACGCTGCTCATGGCCATGCTAAGCAAGCTCTTTCTCTATTCAACCAAATGAAAAGTACGGATACGAAGCCTGACAATATCACATTTGTGGCAGTCTTGTCTGCTTGCAGCCATGGCGGATTAGTTTCTGAAGGCAGAGAGCATTTCAAAAGCATGATTAGGGATTACGGAATAGAGCCCAAAGAGGAAAATTATGCTTGCATGATAGATTTACTTGGAAGAATTGGATTGCTGGAAGAAGCATATGAGTTGATAAACAAAATGCCAATGGAACCAAGTGCGTCTGCATGGGGCGCCCTTCTAAATTCATGTAAAATTCATGGGAATGTTGAGCTAGCTAAGCTTTCTGCTGAGAAACTATTAGACTTGGATCCAGAAGATAGTGGAATTTATGTGTCGCTGGCAAACTTATGCGCTATCAAGCAAAGATGGGTGGATGTAAGAAATGTCAGAAGCCTGATGAAAGAGAGGGGAGTGCAGAAGAATCCTGGGCATAGCTTGATAGAGGTTCAGGGTCAGTTTCATGAATTCTTTGCTGCTGATAAGTCACACCCTCAATCAGAAGAGGTTTATAGAGTTTTAAATGAAATGTATATGTTCTCCAAATCGGAGTTATATCTGCAAAAACAATTTGATGAACTTTTATGCATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

664

Amino Acids

74.46

Weight (kDa)

6.23

Isoelectric Point (pI)

40.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 202 - 250 1.1e-12 PPR repeat family
PPR_1 PF12854 202 - 230 1e-07 PPR repeat
PPR PF01535 205 - 231 8.2e-08 PPR repeat
PPR_2 PF13041 303 - 336 2.1e-07 PPR repeat family
PPR_1 PF12854 303 - 331 4.8e-07 PPR repeat
PPR PF01535 306 - 336 4.1e-07 PPR repeat
PPR_2 PF13041 334 - 370 2e-10 PPR repeat family
PPR PF01535 337 - 367 3.2e-09 PPR repeat
PPR_2 PF13041 437 - 484 1.6e-13 PPR repeat family
PPR PF01535 439 - 466 4.1e-07 PPR repeat
E_motif PF20431 554 - 616 7.1e-16 E motif
Eplus_motif PF20430 622 - 643 3e-06 E+ motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 209
AccB1I GGYRCC 1 cut(s) 1634
AccII CGCG 3 cut(s) 304, 408, 414
AciI CCGC 9 cut(s) 10, 270, 406, 644, 875, 954, 1064, 1143, 1458
AclWI GGATC 2 cut(s) 1706, 1719
AcoI YGGCCR 2 cut(s) 394, 1354
AcsI RAATTY 7 cut(s) 183, 823, 1309, 1645, 1656, 1728, 1868
AcuI CTGAAG 3 cut(s) 573, 1080, 1491
AcyI GRCGYC 1 cut(s) 1635
AfaI GTAC 3 cut(s) 480, 525, 1399
AfiI CCNNNNNNNGG 1 cut(s) 1165
AflII CTTAAG 1 cut(s) 449
AflIII ACRYGT 2 cut(s) 412, 1245
AgsI TTSAA 8 cut(s) 178, 188, 311, 823, 1211, 1291, 1384, 1489
AhdI GACNNNNNGTC 1 cut(s) 50
AjnI CCWGG 2 cut(s) 1158, 1828
AleI CACNNNNGTG 1 cut(s) 1427
AluBI AGCT 7 cut(s) 362, 819, 1370, 1675, 1679, 1684, 1839
AluI AGCT 7 cut(s) 362, 819, 1370, 1675, 1679, 1684, 1839
Alw21I GWGCWC 1 cut(s) 1134
AlwI GGATC 2 cut(s) 1706, 1719
AoxI GGCC 3 cut(s) 208, 394, 1354
ApeKI GCWGC 4 cut(s) 968, 1346, 1449, 1877
ApoI RAATTY 7 cut(s) 183, 823, 1309, 1645, 1656, 1728, 1868
Asp700I GAANNNNTTC 1 cut(s) 584
AspLEI GCGC 4 cut(s) 306, 448, 1637, 1757
AspS9I GGNCC 3 cut(s) 403, 561, 621
AsuC2I CCSGG 1 cut(s) 559
AsuHPI GGTGA 4 cut(s) 118, 209, 1078, 1172
AsuII TTCGAA 2 cut(s) 659, 749
AsuNHI GCTAGC 1 cut(s) 1675
AvaII GGWCC 3 cut(s) 403, 561, 621
BalI TGGCCA 1 cut(s) 1356
BamHI GGATCC 1 cut(s) 1711
BanI GGYRCC 1 cut(s) 1634
BanII GRGCYC 1 cut(s) 1521
BauI CACGAG 1 cut(s) 785
Bbv12I GWGCWC 1 cut(s) 1134
BbvI GCAGC 4 cut(s) 955, 1333, 1461, 1864
BccI CCATC 3 cut(s) 493, 629, 1764
BceAI ACGGC 1 cut(s) 283
BcgI CGANNNNNNTGC 2 cut(s) 720, 754
BciT130I CCWGG 2 cut(s) 1160, 1830
BciVI GTATCC 2 cut(s) 1334, 1396
BclI TGATCA 1 cut(s) 342
BcnI CCSGG 1 cut(s) 559
BfaI CTAG 3 cut(s) 245, 927, 1676
BfmI CTRYAG 2 cut(s) 814, 1278
BfoI RGCGCY 1 cut(s) 1638
BfrI CTTAAG 1 cut(s) 449
BfuAI ACCTGC 1 cut(s) 209
BfuI GTATCC 2 cut(s) 1334, 1396
BisI GCNGC 7 cut(s) 271, 876, 955, 969, 1347, 1450, 1878
BlpI GCTNAGC 2 cut(s) 1362, 1680
BlsI GCNGC 7 cut(s) 272, 877, 956, 970, 1348, 1451, 1879
Bme1390I CCNGG 3 cut(s) 559, 1160, 1830
Bme18I GGWCC 3 cut(s) 403, 561, 621
BmeRI GACNNNNNGTC 1 cut(s) 50
BmgT120I GGNCC 3 cut(s) 403, 561, 621
BmiI GGNNCC 4 cut(s) 562, 1614, 1636, 1713
BmrFI CCNGG 3 cut(s) 559, 1160, 1830
BmtI GCTAGC 1 cut(s) 1679
BoxI GACNNNNGTC 1 cut(s) 116
BpmI CTGGAG 1 cut(s) 155
Bpu1102I GCTNAGC 2 cut(s) 1362, 1680
Bpu14I TTCGAA 2 cut(s) 659, 749
BpuEI CTTGAG 1 cut(s) 348
BpuMI CCSGG 1 cut(s) 559
BsaHI GRCGYC 1 cut(s) 1635
BsaJI CCNNGG 3 cut(s) 1195, 1453, 1829
BsaXI ACNNNNNCTCC 2 cut(s) 462, 492
Bsc4I CCNNNNNNNGG 1 cut(s) 1165
Bse1I ACTGG 4 cut(s) 172, 211, 382, 1183
Bse3DI GCAATG 1 cut(s) 481
BseBI CCWGG 2 cut(s) 1160, 1830
BseDI CCNNGG 3 cut(s) 1195, 1453, 1829
BseGI GGATG 3 cut(s) 613, 916, 1783
BseLI CCNNNNNNNGG 1 cut(s) 1165
BseMI GCAATG 1 cut(s) 481
BseMII CTCAG 4 cut(s) 47, 96, 1055, 1683
BseNI ACTGG 4 cut(s) 172, 211, 382, 1183
BseX3I CGGCCG 1 cut(s) 394
BseXI GCAGC 4 cut(s) 955, 1333, 1461, 1864
BseYI CCCAGC 1 cut(s) 466
BsgI GTGCAG 2 cut(s) 187, 1838
Bsh1236I CGCG 3 cut(s) 304, 408, 414
Bsh1285I CGRYCG 1 cut(s) 397
BshFI GGCC 3 cut(s) 210, 396, 1356
BshNI GGYRCC 1 cut(s) 1634
BsiEI CGRYCG 1 cut(s) 397
BsiHKAI GWGCWC 1 cut(s) 1134
BsiSI CCGG 2 cut(s) 430, 558
BslI CCNNNNNNNGG 1 cut(s) 1165
BsmI GAATGC 2 cut(s) 1024, 1237
BsnI GGCC 3 cut(s) 210, 396, 1356
Bsp119I TTCGAA 2 cut(s) 659, 749
Bsp1286I GDGCHC 2 cut(s) 1134, 1521
Bsp143I GATC 2 cut(s) 342, 1711
Bsp1720I GCTNAGC 2 cut(s) 1362, 1680
Bsp19I CCATGG 2 cut(s) 1195, 1453
BspACI CCGC 9 cut(s) 10, 270, 406, 644, 875, 954, 1064, 1143, 1458
BspANI GGCC 3 cut(s) 210, 396, 1356
BspCNI CTCAG 4 cut(s) 46, 95, 1054, 1684
BspFNI CGCG 3 cut(s) 304, 408, 414
BspHI TCATGA 2 cut(s) 1078, 1864
BspLI GGNNCC 4 cut(s) 562, 1614, 1636, 1713
BspMI ACCTGC 1 cut(s) 209
BspOI GCTAGC 1 cut(s) 1679
BspPI GGATC 2 cut(s) 1706, 1719
BspT104I TTCGAA 2 cut(s) 659, 749
BspT107I GGYRCC 1 cut(s) 1634
BspTI CTTAAG 1 cut(s) 449
BsrDI GCAATG 1 cut(s) 481
BsrI ACTGG 4 cut(s) 172, 211, 382, 1183
BssECI CCNNGG 3 cut(s) 1195, 1453, 1829
BssMI GATC 2 cut(s) 342, 1711
BssNI GRCGYC 1 cut(s) 1635
BssSI CACGAG 1 cut(s) 785
BssT1I CCWWGG 2 cut(s) 1195, 1453
Bst2BI CACGAG 1 cut(s) 785
Bst2UI CCWGG 2 cut(s) 1160, 1830
Bst4CI ACNGT 3 cut(s) 815, 978, 1118
Bst6I CTCTTC 2 cut(s) 770, 1899
BstACI GRCGYC 1 cut(s) 1635
BstAFI CTTAAG 1 cut(s) 449
BstBI TTCGAA 2 cut(s) 659, 749
BstC8I GCNNGC 6 cut(s) 1141, 1368, 1447, 1540, 1677, 1743
BstDEI CTNAG 7 cut(s) 33, 82, 1041, 1254, 1362, 1680, 1692
BstDSI CCRYGG 2 cut(s) 1195, 1453
BstEII GGTNACC 1 cut(s) 718
BstF5I GGATG 3 cut(s) 613, 916, 1783
BstFNI CGCG 3 cut(s) 304, 408, 414
BstH2I RGCGCY 1 cut(s) 1638
BstHHI GCGC 4 cut(s) 306, 448, 1637, 1757
BstKTI GATC 2 cut(s) 345, 1714
BstMBI GATC 2 cut(s) 342, 1711
BstMCI CGRYCG 1 cut(s) 397
BstMWI GCNNNNNNNGC 9 cut(s) 254, 452, 1028, 1037, 1343, 1367, 1455, 1634, 1681
BstNI CCWGG 2 cut(s) 1160, 1830
BstNSI RCATGY 4 cut(s) 169, 459, 994, 1249
BstPAI GACNNNNGTC 1 cut(s) 116
BstPI GGTNACC 1 cut(s) 718
BstSCI CCNGG 3 cut(s) 557, 1158, 1828
BstSFI CTRYAG 2 cut(s) 814, 1278
BstUI CGCG 3 cut(s) 304, 408, 414
BstV1I GCAGC 4 cut(s) 955, 1333, 1461, 1864
BstX2I RGATCY 1 cut(s) 1711
BstYI RGATCY 1 cut(s) 1711
BstZI CGGCCG 1 cut(s) 394
BsuI GTATCC 2 cut(s) 1334, 1396
BsuRI GGCC 3 cut(s) 210, 396, 1356
BtgI CCRYGG 2 cut(s) 1195, 1453
BtgZI GCGATG 1 cut(s) 1037
BtsCI GGATG 3 cut(s) 613, 916, 1783
BtsI GCAGTG 1 cut(s) 738
BtsIMutI CAGTG 3 cut(s) 204, 703, 738
BveI ACCTGC 1 cut(s) 209
Cac8I GCNNGC 6 cut(s) 1141, 1368, 1447, 1540, 1677, 1743
CciI TCATGA 2 cut(s) 1078, 1864
CfoI GCGC 4 cut(s) 306, 448, 1637, 1757
Cfr13I GGNCC 3 cut(s) 403, 561, 621
CseI GACGC 3 cut(s) 403, 974, 1611
Csp6I GTAC 3 cut(s) 479, 524, 1398
CspCI CAANNNNNGTGG 2 cut(s) 613, 648
CviQI GTAC 3 cut(s) 479, 524, 1398
DdeI CTNAG 7 cut(s) 33, 82, 1041, 1254, 1362, 1680, 1692
DinI GGCGCC 1 cut(s) 1636
DpnI GATC 2 cut(s) 344, 1713
DpnII GATC 2 cut(s) 342, 1711
DraI TTTAAA 1 cut(s) 1923
DriI GACNNNNNGTC 1 cut(s) 50
EaeI YGGCCR 2 cut(s) 394, 1354
EagI CGGCCG 1 cut(s) 394
Eam1104I CTCTTC 2 cut(s) 770, 1899
Eam1105I GACNNNNNGTC 1 cut(s) 50
EarI CTCTTC 2 cut(s) 770, 1899
EciI GGCGGA 1 cut(s) 1473
EclXI CGGCCG 1 cut(s) 394
Eco130I CCWWGG 2 cut(s) 1195, 1453
Eco24I GRGCYC 1 cut(s) 1521
Eco47I GGWCC 3 cut(s) 403, 561, 621
Eco52I CGGCCG 1 cut(s) 394
Eco57I CTGAAG 3 cut(s) 573, 1080, 1491
Eco91I GGTNACC 1 cut(s) 718
EcoO65I GGTNACC 1 cut(s) 718
EcoRI GAATTC 1 cut(s) 1868
EcoRII CCWGG 2 cut(s) 1158, 1828
EcoT14I CCWWGG 2 cut(s) 1195, 1453
EcoT22I ATGCAT 1 cut(s) 1991
EcoT38I GRGCYC 1 cut(s) 1521
EgeI GGCGCC 1 cut(s) 1636
EheI GGCGCC 1 cut(s) 1636
ErhI CCWWGG 2 cut(s) 1195, 1453
FalI AAGNNNNNCTT 1 cut(s) 28
FauI CCCGC 2 cut(s) 17, 637
FauNDI CATATG 2 cut(s) 1585, 1991
FbaI TGATCA 1 cut(s) 342
Fnu4HI GCNGC 7 cut(s) 271, 876, 955, 969, 1347, 1450, 1878
FokI GGATG 3 cut(s) 620, 923, 1790
FriOI GRGCYC 1 cut(s) 1521
Fsp4HI GCNGC 7 cut(s) 271, 876, 955, 969, 1347, 1450, 1878
FspBI CTAG 3 cut(s) 245, 927, 1676
GlaI GCGC 4 cut(s) 305, 447, 1636, 1756
GluI GCNGC 7 cut(s) 271, 876, 955, 969, 1347, 1450, 1878
GsaI CCCAGC 1 cut(s) 470
GsuI CTGGAG 1 cut(s) 155
HaeII RGCGCY 1 cut(s) 1638
HaeIII GGCC 3 cut(s) 210, 396, 1356
HapII CCGG 2 cut(s) 430, 558
HgaI GACGC 3 cut(s) 403, 974, 1611
HhaI GCGC 4 cut(s) 306, 448, 1637, 1757
Hin1I GRCGYC 1 cut(s) 1635
Hin6I GCGC 4 cut(s) 304, 446, 1635, 1755
HinP1I GCGC 4 cut(s) 304, 446, 1635, 1755
HincII GTYRAC 1 cut(s) 370
HindII GTYRAC 1 cut(s) 370
HindIII AAGCTT 1 cut(s) 1682
HinfI GANTC 9 cut(s) 37, 152, 240, 381, 473, 568, 1091, 1177, 1825
HpaI GTTAAC 1 cut(s) 370
HpaII CCGG 2 cut(s) 430, 558
HphI GGTGA 4 cut(s) 118, 209, 1078, 1172
Hpy166II GTNNAC 3 cut(s) 370, 811, 918
Hpy188I TCNGA 9 cut(s) 36, 347, 514, 1044, 1107, 1471, 1793, 1903, 1951
Hpy188III TCNNGA 4 cut(s) 785, 1079, 1715, 1865
Hpy8I GTNNAC 3 cut(s) 370, 811, 918
Hpy99I CGWCG 2 cut(s) 269, 419
HpyAV CCTTC 4 cut(s) 259, 574, 1466, 1649
HpyCH4III ACNGT 3 cut(s) 815, 978, 1118
HpyCH4IV ACGT 1 cut(s) 117
HpyF10VI GCNNNNNNNGC 9 cut(s) 254, 452, 1028, 1037, 1343, 1367, 1455, 1634, 1681
HpyF3I CTNAG 7 cut(s) 33, 82, 1041, 1254, 1362, 1680, 1692
HpySE526I ACGT 1 cut(s) 117
Hsp92I GRCGYC 1 cut(s) 1635
HspAI GCGC 4 cut(s) 304, 446, 1635, 1755
KasI GGCGCC 1 cut(s) 1634
Ksp22I TGATCA 1 cut(s) 342
KspAI GTTAAC 1 cut(s) 370
Kzo9I GATC 2 cut(s) 342, 1711
LmnI GCTCC 2 cut(s) 174, 1108
Lsp1109I GCAGC 4 cut(s) 955, 1333, 1461, 1864
MaeI CTAG 3 cut(s) 245, 927, 1676
MaeII ACGT 1 cut(s) 117
MaeIII GTNAC 3 cut(s) 613, 718, 1887
MalI GATC 2 cut(s) 344, 1713
MboI GATC 2 cut(s) 342, 1711
MboII GAAGA 8 cut(s) 508, 787, 814, 1572, 1589, 1730, 1834, 1916
MflI RGATCY 1 cut(s) 1711
MhlI GDGCHC 2 cut(s) 1134, 1521
MlsI TGGCCA 1 cut(s) 1356
MluI ACGCGT 1 cut(s) 412
MluNI TGGCCA 1 cut(s) 1356
Mly113I GGCGCC 1 cut(s) 1635
MlyI GAGTC 5 cut(s) 31, 161, 249, 577, 1100
MmeI TCCRAC 1 cut(s) 822
Mox20I TGGCCA 1 cut(s) 1356
Mph1103I ATGCAT 1 cut(s) 1991
MroXI GAANNNNTTC 1 cut(s) 584
MscI TGGCCA 1 cut(s) 1356
MseI TTAA 8 cut(s) 369, 450, 831, 936, 984, 1151, 1268, 1922
MslI CAYNNNNRTG 7 cut(s) 164, 546, 789, 902, 1356, 1427, 1665
Msp20I TGGCCA 1 cut(s) 1356
MspCI CTTAAG 1 cut(s) 449
MspI CCGG 2 cut(s) 430, 558
MspR9I CCNGG 3 cut(s) 559, 1160, 1830
Mva1269I GAATGC 2 cut(s) 1024, 1237
MvaI CCWGG 2 cut(s) 1160, 1830
MvnI CGCG 3 cut(s) 304, 408, 414
MwoI GCNNNNNNNGC 9 cut(s) 254, 452, 1028, 1037, 1343, 1367, 1455, 1634, 1681
NarI GGCGCC 1 cut(s) 1635
NciI CCSGG 1 cut(s) 559
NcoI CCATGG 2 cut(s) 1195, 1453
NdeI CATATG 2 cut(s) 1585, 1991
NdeII GATC 2 cut(s) 342, 1711
NheI GCTAGC 1 cut(s) 1675
NlaIV GGNNCC 4 cut(s) 562, 1614, 1636, 1713
NmuCI GTSAC 1 cut(s) 1887
NsiI ATGCAT 1 cut(s) 1991
NspI RCATGY 4 cut(s) 169, 459, 994, 1249
NspV TTCGAA 2 cut(s) 659, 749
OliI CACNNNNGTG 1 cut(s) 1427
PagI TCATGA 2 cut(s) 1078, 1864
PciI ACATGT 1 cut(s) 1245
PcsI WCGNNNNNNNCGW 1 cut(s) 746
PctI GAATGC 2 cut(s) 1024, 1237
PdmI GAANNNNTTC 1 cut(s) 584
PfeI GAWTC 4 cut(s) 381, 473, 1177, 1825
PkrI GCNGC 7 cut(s) 272, 877, 956, 970, 1348, 1451, 1879
PleI GAGTC 5 cut(s) 31, 160, 248, 576, 1099
PluTI GGCGCC 1 cut(s) 1638
PpsI GAGTC 5 cut(s) 31, 160, 248, 576, 1099
PscI ACATGT 1 cut(s) 1245
PshAI GACNNNNGTC 1 cut(s) 116
Psp6I CCWGG 2 cut(s) 1158, 1828
PspEI GGTNACC 1 cut(s) 718
PspFI CCCAGC 1 cut(s) 466
PspGI CCWGG 2 cut(s) 1158, 1828
PspN4I GGNNCC 4 cut(s) 562, 1614, 1636, 1713
PspPI GGNCC 3 cut(s) 403, 561, 621
PsuI RGATCY 1 cut(s) 1711
RsaI GTAC 3 cut(s) 480, 525, 1399
RsaNI GTAC 3 cut(s) 479, 524, 1398
RseI CAYNNNNRTG 7 cut(s) 164, 546, 789, 902, 1356, 1427, 1665
SaqAI TTAA 8 cut(s) 369, 450, 831, 936, 984, 1151, 1268, 1922
SatI GCNGC 7 cut(s) 271, 876, 955, 969, 1347, 1450, 1878
Sau3AI GATC 2 cut(s) 342, 1711
Sau96I GGNCC 3 cut(s) 403, 561, 621
SchI GAGTC 5 cut(s) 31, 161, 249, 577, 1100
ScrFI CCNGG 3 cut(s) 559, 1160, 1830
SduI GDGCHC 2 cut(s) 1134, 1521
SfcI CTRYAG 2 cut(s) 814, 1278
SfoI GGCGCC 1 cut(s) 1636
SfuI TTCGAA 2 cut(s) 659, 749
SinI GGWCC 3 cut(s) 403, 561, 621
SmiMI CAYNNNNRTG 7 cut(s) 164, 546, 789, 902, 1356, 1427, 1665
SmlI CTYRAG 2 cut(s) 363, 449
SmoI CTYRAG 2 cut(s) 363, 449
SsiI CCGC 9 cut(s) 10, 270, 406, 644, 875, 954, 1064, 1143, 1458
SspDI GGCGCC 1 cut(s) 1634
SspMI CTAG 3 cut(s) 245, 927, 1676
StyD4I CCNGG 3 cut(s) 557, 1158, 1828
StyI CCWWGG 2 cut(s) 1195, 1453
TaaI ACNGT 3 cut(s) 815, 978, 1118
TaiI ACGT 1 cut(s) 120
TaqI TCGA 4 cut(s) 417, 588, 659, 749
TauI GCSGC 3 cut(s) 273, 878, 957
TfiI GAWTC 4 cut(s) 381, 473, 1177, 1825
Tru1I TTAA 8 cut(s) 369, 450, 831, 936, 984, 1151, 1268, 1922
Tru9I TTAA 8 cut(s) 369, 450, 831, 936, 984, 1151, 1268, 1922
TscAI CASTG 3 cut(s) 211, 703, 738
TseFI GTSAC 1 cut(s) 1887
TseI GCWGC 4 cut(s) 968, 1346, 1449, 1877
Tsp45I GTSAC 1 cut(s) 1887
TspGWI ACGGA 4 cut(s) 553, 592, 1415, 1524
TspRI CASTG 3 cut(s) 211, 703, 738
Vha464I CTTAAG 1 cut(s) 449
VpaK11BI GGWCC 3 cut(s) 403, 561, 621
XapI RAATTY 7 cut(s) 183, 823, 1309, 1645, 1656, 1728, 1868
XceI RCATGY 4 cut(s) 169, 459, 994, 1249
XmnI GAANNNNTTC 1 cut(s) 584
XspI CTAG 3 cut(s) 245, 927, 1676
Zsp2I ATGCAT 1 cut(s) 1991
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.