RLG00000012036

pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0008841
Physical Location & Seq
Reverse (-)
14692054 .. 14696736
4683 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012036

Sequence Viewer

Length: 2421 bp
ATGGGCAGTGACGTCAATTCGACGGACTGTGCTGGAGGTGGGCATGAGCAGAGAGGTGGGCTGCTTCCCATATCTGTTGTCGGTGATGTTTGCGGTCGGGGATGTGACCGGATCTGGTCTTGTGGAGACACAGAGAATCTTGATCTAGGTGGCGGCGTTGGGGTCGCGATTTTGGGATGGTCGGAGCTGACAGATAGGGTCTGGGACGAGGAAGGCTTCGTTTCTCCTACAGATACGGTGATGGCTCGTCCTGTTAGATGGCTTCTGGCAGCGTCTATCCATTGCGTCGGTGTTCGAATTGGCAGGGAAGAAGACGCTGACCAGTCTGTGTTGGGAAGCATTGACGTCGACGGCGGCTGCGTGGTGTTTCCCTCGACTGGCTTCGTTGATGGTGGTTGGCTGGAAGATTGTATTATTATGAAGTCCCGCTTCCAGTCTTTGTTCTCTGCTCAGACTCACAGACCCCAAATCCTCCACTCACTTCATCAGCGACCAATCTCATCACCCTCAACCAATAAACCCAAATGGAACTCCAAGACCAACGTCATAATCACCAACCCAACTCTGCTCATCATGGAGTCTTGCACCACCATGCTCCAGTTGAAGCAAATTCAAGCCCAAATGACCTGCACTGGCCTCATTCACCACACCTTTCCCGTCAGCAGAGTCCTAGCCTTCTGTGCTATCGCCGACGGCGGCGACATTCACTACGCTAATCTTATTTTCACGCGCATTGAAAAACCCAATACGTATATGTGGAACACGATGATCAGAGGCTACTCCAAAGCTCAAGTTAACACAACTGGATTCTCATTTTTCGGCCGAATGGTCCGTGAACGCGTCGAAATGGACTGCCGGAGTTTTGTCTTTGCGCTTAAGGCATGTGGGTTGCTGGGAGATTCGGTACATTGCGTGATTTGGAAGATGGGTTTTGGTTCTGACTTGCTGGTGCGAAATGGGCTGGTGCATCATTATGCTGAAGGCGGGTCTGTGAACCATGCACGGAAGGTGTTCGATGAAAGTTCTGTGAGGGATGTTGTAACTTGGACCACCATGATTGATGGGTATGCGGGGCGTGGTTATTCGAATGAGGCTATGGAGTTGTTTGATGAGATGTTGTTGAGTGATGTTGAGCCAAATGAGGTTACTATGATTGCAGTGCTTTCGGCGTGTTCGAATAAGGGGGATATTGGTATGGGGAACAGTATTCATGAGTATATGAGAAAGAAGAATGTGTACTGTAGCTTGAATTTACTTAATGCTTTGTTGTATATGTACGTGAAATGTGGTTGTTTGACTGCGGCAAAAGAGGTTTTTGATGACATGAAAGTGAGGGATGTGTTTACATGGACTAGCATGGTTAATGGATATGCAAAATGCGGCGAGTTAGACGCTGCAAGACAATTTTTTAATGACATGCCTGATAGGAATGTAGTATCTTGGAATGCGATGATTGCTGGTTATGCCCAGAACAATCAACCTACTGAAGCGGTGTTGTTGTTTCATGACATGGTAGAGTCAGGTTTCGCTCCGATAGAGAACAGTTTAGTATGTGTGCTCTCTGCTTGTGGTCAGTTATGTTGCCTGGATTTGGGTCGGTGGATTCACCAGTATTATGTCCATGGAAATCATATTCAACTTAGTGTGATTTTGGGGAATGCGTTGATAGACATGTATGCCAAGTGTGGGAGTTTAACTTCTGCTACAGAACTTTTCAATGAAATGCCAGAGAAAAATTTGGTTTCTTGGAATACGATGATTGCTGGATACGCTGCTCATGGCCATGCTAAGCAAGCTCTTACTCTATTCAACCAAATGAAAAGTACGGATACGAAGCCTGACCATATCACATTTGTGGCAGTCTTGTCTGCTTGCAGCCATGGCGGATTAGTTTCTGAAGGCAGAGAGCATTTCAAAAGCATGATTAGGGATTACGGAATAGAGCCCAAAGAGGAAAATTATGCTTGCATGATAGATTTACTTGGAAGAATTGGATTGCTGGAAGAAGCGTATGAGTTGATAAACAAAATGCCAATGGAACCGAGTGCGTCTGCATGGGGCGCCCTTCTAAATTCATGTAAAATTCATGGGAATGTTGAGCTAGCTAAGCTTTCTGCTGAGAAACTATTAGACTTGGATCCAGAAGATAGTGGAATTTATGTGTCGCTGGCAAACTTATGCGCTATCAAGCAAAGATGGGTGGATGTAAGAAATGTCAGAAGCCTGATGAAACAGAGGGGAGTGCAGAAGAATCCTGGGCATAGCTTGATAGAGGTTCAGGGTCAGTTTCATGAATTCTTTGCCGCTGATAAGTCACACCCTCAATCAGAAGAGGTTTATAGAGTTTTAAATGATATATATATGTTCTCCAAATCGGAGTTATATCTGCAAAAACAATTTGATGAACTTTTATGCATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

807

Amino Acids

89.46

Weight (kDa)

5.58

Isoelectric Point (pI)

43.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 344 - 392 8.8e-13 PPR repeat family
PPR_1 PF12854 344 - 372 1.6e-07 PPR repeat
PPR PF01535 347 - 374 1e-07 PPR repeat
PPR_2 PF13041 445 - 478 2.6e-07 PPR repeat family
PPR_1 PF12854 445 - 473 6e-07 PPR repeat
PPR PF01535 448 - 478 5.2e-07 PPR repeat
PPR_2 PF13041 476 - 512 5.2e-09 PPR repeat family
PPR PF01535 479 - 509 3.3e-08 PPR repeat
PPR_2 PF13041 579 - 626 1e-12 PPR repeat family
PPR PF01535 581 - 608 1.8e-06 PPR repeat
E_motif PF20431 696 - 758 7.9e-16 E motif
Eplus_motif PF20430 764 - 786 1.3e-06 E+ motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 15, 348
Acc36I ACCTGC 1 cut(s) 635
AccB1I GGYRCC 1 cut(s) 2060
AccI GTMKAC 1 cut(s) 348
AccII CGCG 3 cut(s) 167, 730, 840
AclWI GGATC 3 cut(s) 119, 2132, 2145
AcoI YGGCCR 2 cut(s) 820, 1780
AcsI RAATTY 7 cut(s) 609, 1249, 1735, 2071, 2082, 2154, 2294
AcuI CTGAAG 3 cut(s) 999, 1506, 1917
AcyI GRCGYC 3 cut(s) 12, 345, 2061
AfaI GTAC 4 cut(s) 906, 1238, 1277, 1825
AfiI CCNNNNNNNGG 3 cut(s) 377, 1591, 1686
AflII CTTAAG 1 cut(s) 875
AflIII ACRYGT 2 cut(s) 838, 1671
AgsI TTSAA 8 cut(s) 604, 614, 737, 1249, 1637, 1717, 1810, 1915
AjnI CCWGG 2 cut(s) 1584, 2254
AleI CACNNNNGTG 1 cut(s) 1853
AluBI AGCT 8 cut(s) 187, 788, 1245, 1796, 2101, 2105, 2110, 2265
AluI AGCT 8 cut(s) 187, 788, 1245, 1796, 2101, 2105, 2110, 2265
Alw21I GWGCWC 1 cut(s) 1560
Alw26I GTCTC 1 cut(s) 120
AlwI GGATC 3 cut(s) 119, 2132, 2145
AoxI GGCC 3 cut(s) 634, 820, 1780
ApeKI GCWGC 6 cut(s) 61, 269, 357, 1394, 1772, 1875
ApoI RAATTY 7 cut(s) 609, 1249, 1735, 2071, 2082, 2154, 2294
Asp700I GAANNNNTTC 1 cut(s) 1010
AspLEI GCGC 4 cut(s) 732, 874, 2063, 2183
AspS9I GGNCC 2 cut(s) 829, 1047
AsuHPI GGTGA 6 cut(s) 95, 250, 495, 544, 635, 1598
AsuII TTCGAA 3 cut(s) 295, 1085, 1175
AsuNHI GCTAGC 1 cut(s) 2101
AvaII GGWCC 2 cut(s) 829, 1047
BalI TGGCCA 1 cut(s) 1782
BamHI GGATCC 1 cut(s) 2137
BanI GGYRCC 1 cut(s) 2060
BanII GRGCYC 1 cut(s) 1947
BarI GAAGNNNNNNTAC 2 cut(s) 1220, 1252
BbsI GAAGAC 1 cut(s) 318
Bbv12I GWGCWC 1 cut(s) 1560
BbvI GCAGC 6 cut(s) 48, 281, 344, 1381, 1759, 1887
BccI CCATC 7 cut(s) 171, 235, 252, 383, 919, 1055, 2190
BceAI ACGGC 2 cut(s) 367, 709
BcgI CGANNNNNNTGC 4 cut(s) 328, 362, 1146, 1180
BciT130I CCWGG 2 cut(s) 1586, 2256
BciVI GTATCC 2 cut(s) 1760, 1822
BclI TGATCA 1 cut(s) 768
BcoDI GTCTC 1 cut(s) 120
BfaI CTAG 4 cut(s) 146, 671, 1353, 2102
BfmI CTRYAG 3 cut(s) 228, 1240, 1704
BfoI RGCGCY 1 cut(s) 2064
BfrI CTTAAG 1 cut(s) 875
BfuAI ACCTGC 1 cut(s) 635
BfuI GTATCC 2 cut(s) 1760, 1822
BlpI GCTNAGC 2 cut(s) 1788, 2106
Bme1390I CCNGG 2 cut(s) 1586, 2256
Bme18I GGWCC 2 cut(s) 829, 1047
BmgT120I GGNCC 2 cut(s) 829, 1047
BmiI GGNNCC 3 cut(s) 2040, 2062, 2139
BmrFI CCNGG 2 cut(s) 1586, 2256
BmsI GCATC 1 cut(s) 976
BmtI GCTAGC 1 cut(s) 2105
BoxI GACNNNNGTC 1 cut(s) 542
BpiI GAAGAC 1 cut(s) 318
BpmI CTGGAG 2 cut(s) 54, 581
Bpu1102I GCTNAGC 2 cut(s) 1788, 2106
Bpu14I TTCGAA 3 cut(s) 295, 1085, 1175
BpuEI CTTGAG 1 cut(s) 774
BsaAI YACGTR 2 cut(s) 750, 1279
BsaHI GRCGYC 3 cut(s) 12, 345, 2061
BsaJI CCNNGG 3 cut(s) 1621, 1879, 2255
BsaWI WCCGGW 1 cut(s) 108
BsaXI ACNNNNNCTCC 2 cut(s) 888, 918
Bsc4I CCNNNNNNNGG 3 cut(s) 377, 1591, 1686
Bse1I ACTGG 7 cut(s) 322, 382, 433, 598, 637, 808, 1609
Bse3DI GCAATG 2 cut(s) 280, 907
BseBI CCWGG 2 cut(s) 1586, 2256
BseDI CCNNGG 3 cut(s) 1621, 1879, 2255
BseGI GGATG 5 cut(s) 107, 182, 1039, 1342, 2209
BseLI CCNNNNNNNGG 3 cut(s) 377, 1591, 1686
BseMI GCAATG 2 cut(s) 280, 907
BseMII CTCAG 2 cut(s) 464, 2109
BseNI ACTGG 7 cut(s) 322, 382, 433, 598, 637, 808, 1609
BseX3I CGGCCG 1 cut(s) 820
BseXI GCAGC 6 cut(s) 48, 281, 344, 1381, 1759, 1887
BseYI CCCAGC 1 cut(s) 892
BsgI GTGCAG 2 cut(s) 613, 2264
Bsh1236I CGCG 3 cut(s) 167, 730, 840
Bsh1285I CGRYCG 2 cut(s) 97, 823
BshFI GGCC 3 cut(s) 636, 822, 1782
BshNI GGYRCC 1 cut(s) 2060
BsiEI CGRYCG 2 cut(s) 97, 823
BsiHKAI GWGCWC 1 cut(s) 1560
BsiSI CCGG 2 cut(s) 109, 856
BslFI GGGAC 2 cut(s) 218, 409
BslI CCNNNNNNNGG 3 cut(s) 377, 1591, 1686
BsmAI GTCTC 1 cut(s) 120
BsmFI GGGAC 2 cut(s) 218, 409
BsmI GAATGC 2 cut(s) 1450, 1663
BsnI GGCC 3 cut(s) 636, 822, 1782
Bsp119I TTCGAA 3 cut(s) 295, 1085, 1175
Bsp1286I GDGCHC 2 cut(s) 1560, 1947
Bsp143I GATC 4 cut(s) 111, 142, 768, 2137
Bsp1720I GCTNAGC 2 cut(s) 1788, 2106
Bsp19I CCATGG 2 cut(s) 1621, 1879
Bsp68I TCGCGA 1 cut(s) 167
BspANI GGCC 3 cut(s) 636, 822, 1782
BspCNI CTCAG 2 cut(s) 463, 2110
BspFNI CGCG 3 cut(s) 167, 730, 840
BspHI TCATGA 3 cut(s) 1210, 1504, 2290
BspLI GGNNCC 3 cut(s) 2040, 2062, 2139
BspMI ACCTGC 1 cut(s) 635
BspOI GCTAGC 1 cut(s) 2105
BspPI GGATC 3 cut(s) 119, 2132, 2145
BspT104I TTCGAA 3 cut(s) 295, 1085, 1175
BspT107I GGYRCC 1 cut(s) 2060
BspTI CTTAAG 1 cut(s) 875
BsrDI GCAATG 2 cut(s) 280, 907
BsrI ACTGG 7 cut(s) 322, 382, 433, 598, 637, 808, 1609
BssECI CCNNGG 3 cut(s) 1621, 1879, 2255
BssMI GATC 4 cut(s) 111, 142, 768, 2137
BssNI GRCGYC 3 cut(s) 12, 345, 2061
BssT1I CCWWGG 2 cut(s) 1621, 1879
Bst2UI CCWGG 2 cut(s) 1586, 2256
Bst4CI ACNGT 5 cut(s) 29, 238, 1205, 1241, 1544
Bst6I CTCTTC 1 cut(s) 2325
BstACI GRCGYC 3 cut(s) 12, 345, 2061
BstAFI CTTAAG 1 cut(s) 875
BstBAI YACGTR 2 cut(s) 750, 1279
BstBI TTCGAA 3 cut(s) 295, 1085, 1175
BstC8I GCNNGC 5 cut(s) 1794, 1873, 1966, 2103, 2169
BstDEI CTNAG 5 cut(s) 450, 1640, 1788, 2106, 2118
BstDSI CCRYGG 2 cut(s) 1621, 1879
BstF5I GGATG 5 cut(s) 107, 182, 1039, 1342, 2209
BstFNI CGCG 3 cut(s) 167, 730, 840
BstH2I RGCGCY 1 cut(s) 2064
BstHHI GCGC 4 cut(s) 732, 874, 2063, 2183
BstKTI GATC 4 cut(s) 114, 145, 771, 2140
BstMAI GTCTC 1 cut(s) 120
BstMBI GATC 4 cut(s) 111, 142, 768, 2137
BstMCI CGRYCG 2 cut(s) 97, 823
BstNI CCWGG 2 cut(s) 1586, 2256
BstNSI RCATGY 3 cut(s) 885, 1420, 1675
BstPAI GACNNNNGTC 1 cut(s) 542
BstSCI CCNGG 2 cut(s) 1584, 2254
BstSFI CTRYAG 3 cut(s) 228, 1240, 1704
BstSNI TACGTA 1 cut(s) 750
BstUI CGCG 3 cut(s) 167, 730, 840
BstV1I GCAGC 6 cut(s) 48, 281, 344, 1381, 1759, 1887
BstV2I GAAGAC 1 cut(s) 318
BstX2I RGATCY 2 cut(s) 111, 2137
BstYI RGATCY 2 cut(s) 111, 2137
BstZI CGGCCG 1 cut(s) 820
BsuI GTATCC 2 cut(s) 1760, 1822
BsuRI GGCC 3 cut(s) 636, 822, 1782
BtgI CCRYGG 2 cut(s) 1621, 1879
BtgZI GCGATG 1 cut(s) 1463
BtsCI GGATG 5 cut(s) 107, 182, 1039, 1342, 2209
BtsI GCAGTG 2 cut(s) 13, 1164
BtsIMutI CAGTG 3 cut(s) 13, 630, 1164
BtuMI TCGCGA 1 cut(s) 167
BveI ACCTGC 1 cut(s) 635
Cac8I GCNNGC 5 cut(s) 1794, 1873, 1966, 2103, 2169
CciI TCATGA 3 cut(s) 1210, 1504, 2290
CfoI GCGC 4 cut(s) 732, 874, 2063, 2183
Cfr13I GGNCC 2 cut(s) 829, 1047
CseI GACGC 6 cut(s) 261, 274, 323, 829, 1400, 2037
Csp6I GTAC 4 cut(s) 905, 1237, 1276, 1824
CspCI CAANNNNNGTGG 2 cut(s) 1039, 1074
CviQI GTAC 4 cut(s) 905, 1237, 1276, 1824
DdeI CTNAG 5 cut(s) 450, 1640, 1788, 2106, 2118
DinI GGCGCC 1 cut(s) 2062
DpnI GATC 4 cut(s) 113, 144, 770, 2139
DpnII GATC 4 cut(s) 111, 142, 768, 2137
DraI TTTAAA 1 cut(s) 2349
EaeI YGGCCR 2 cut(s) 820, 1780
EagI CGGCCG 1 cut(s) 820
Eam1104I CTCTTC 1 cut(s) 2325
EarI CTCTTC 1 cut(s) 2325
EciI GGCGGA 1 cut(s) 1899
EclXI CGGCCG 1 cut(s) 820
Eco105I TACGTA 1 cut(s) 750
Eco130I CCWWGG 2 cut(s) 1621, 1879
Eco24I GRGCYC 1 cut(s) 1947
Eco47I GGWCC 2 cut(s) 829, 1047
Eco52I CGGCCG 1 cut(s) 820
Eco57I CTGAAG 3 cut(s) 999, 1506, 1917
EcoRI GAATTC 1 cut(s) 2294
EcoRII CCWGG 2 cut(s) 1584, 2254
EcoT14I CCWWGG 2 cut(s) 1621, 1879
EcoT22I ATGCAT 1 cut(s) 2417
EcoT38I GRGCYC 1 cut(s) 1947
EgeI GGCGCC 1 cut(s) 2062
EheI GGCGCC 1 cut(s) 2062
ErhI CCWWGG 2 cut(s) 1621, 1879
FalI AAGNNNNNCTT 2 cut(s) 413, 445
FaqI GGGAC 2 cut(s) 218, 409
FauI CCCGC 3 cut(s) 434, 977, 1063
FauNDI CATATG 1 cut(s) 2417
FbaI TGATCA 1 cut(s) 768
FblI GTMKAC 1 cut(s) 348
FokI GGATG 5 cut(s) 114, 189, 1046, 1349, 2216
FriOI GRGCYC 1 cut(s) 1947
FspBI CTAG 4 cut(s) 146, 671, 1353, 2102
GlaI GCGC 4 cut(s) 731, 873, 2062, 2182
GsaI CCCAGC 1 cut(s) 896
GsuI CTGGAG 2 cut(s) 54, 581
HaeII RGCGCY 1 cut(s) 2064
HaeIII GGCC 3 cut(s) 636, 822, 1782
HapII CCGG 2 cut(s) 109, 856
HgaI GACGC 6 cut(s) 261, 274, 323, 829, 1400, 2037
HhaI GCGC 4 cut(s) 732, 874, 2063, 2183
Hin1I GRCGYC 3 cut(s) 12, 345, 2061
Hin6I GCGC 4 cut(s) 730, 872, 2061, 2181
HinP1I GCGC 4 cut(s) 730, 872, 2061, 2181
HincII GTYRAC 2 cut(s) 349, 796
HindII GTYRAC 2 cut(s) 349, 796
HindIII AAGCTT 1 cut(s) 2108
HinfI GANTC 9 cut(s) 136, 454, 578, 666, 807, 899, 1517, 1603, 2251
HpaI GTTAAC 1 cut(s) 796
HpaII CCGG 2 cut(s) 109, 856
HphI GGTGA 6 cut(s) 95, 250, 495, 544, 635, 1598
Hpy166II GTNNAC 6 cut(s) 349, 796, 836, 994, 1237, 1344
Hpy188I TCNGA 9 cut(s) 184, 453, 773, 940, 1533, 1897, 2219, 2329, 2377
Hpy188III TCNNGA 6 cut(s) 140, 166, 1211, 1505, 2141, 2291
Hpy8I GTNNAC 6 cut(s) 349, 796, 836, 994, 1237, 1344
Hpy99I CGWCG 6 cut(s) 25, 290, 350, 353, 695, 845
HpyAV CCTTC 6 cut(s) 206, 685, 974, 1000, 1892, 2075
HpyCH4III ACNGT 5 cut(s) 29, 238, 1205, 1241, 1544
HpyCH4IV ACGT 5 cut(s) 12, 345, 543, 749, 1278
HpyF3I CTNAG 5 cut(s) 450, 1640, 1788, 2106, 2118
HpySE526I ACGT 5 cut(s) 12, 345, 543, 749, 1278
Hsp92I GRCGYC 3 cut(s) 12, 345, 2061
HspAI GCGC 4 cut(s) 730, 872, 2061, 2181
KasI GGCGCC 1 cut(s) 2060
Ksp22I TGATCA 1 cut(s) 768
KspAI GTTAAC 1 cut(s) 796
Kzo9I GATC 4 cut(s) 111, 142, 768, 2137
LmnI GCTCC 3 cut(s) 184, 600, 1534
Lsp1109I GCAGC 6 cut(s) 48, 281, 344, 1381, 1759, 1887
LweI GCATC 1 cut(s) 976
MaeI CTAG 4 cut(s) 146, 671, 1353, 2102
MaeII ACGT 5 cut(s) 12, 345, 543, 749, 1278
MaeIII GTNAC 5 cut(s) 8, 104, 1039, 1144, 2313
MalI GATC 4 cut(s) 113, 144, 770, 2139
MboI GATC 4 cut(s) 111, 142, 768, 2137
MflI RGATCY 2 cut(s) 111, 2137
MhlI GDGCHC 2 cut(s) 1560, 1947
MlsI TGGCCA 1 cut(s) 1782
MluI ACGCGT 1 cut(s) 838
MluNI TGGCCA 1 cut(s) 1782
Mly113I GGCGCC 1 cut(s) 2061
MlyI GAGTC 4 cut(s) 448, 587, 675, 1526
MmeI TCCRAC 1 cut(s) 162
Mox20I TGGCCA 1 cut(s) 1782
Mph1103I ATGCAT 1 cut(s) 2417
MroXI GAANNNNTTC 1 cut(s) 1010
MscI TGGCCA 1 cut(s) 1782
MseI TTAA 7 cut(s) 795, 876, 1257, 1362, 1410, 1694, 2348
MslI CAYNNNNRTG 6 cut(s) 590, 972, 1328, 1782, 1853, 2091
Msp20I TGGCCA 1 cut(s) 1782
MspA1I CMGCKG 1 cut(s) 2306
MspCI CTTAAG 1 cut(s) 875
MspI CCGG 2 cut(s) 109, 856
MspR9I CCNGG 2 cut(s) 1586, 2256
Mva1269I GAATGC 2 cut(s) 1450, 1663
MvaI CCWGG 2 cut(s) 1586, 2256
MvnI CGCG 3 cut(s) 167, 730, 840
NarI GGCGCC 1 cut(s) 2061
NcoI CCATGG 2 cut(s) 1621, 1879
NdeI CATATG 1 cut(s) 2417
NdeII GATC 4 cut(s) 111, 142, 768, 2137
NheI GCTAGC 1 cut(s) 2101
NlaIV GGNNCC 3 cut(s) 2040, 2062, 2139
NmuCI GTSAC 3 cut(s) 8, 104, 2313
NruI TCGCGA 1 cut(s) 167
NsiI ATGCAT 1 cut(s) 2417
NspI RCATGY 3 cut(s) 885, 1420, 1675
NspV TTCGAA 3 cut(s) 295, 1085, 1175
OliI CACNNNNGTG 1 cut(s) 1853
PagI TCATGA 3 cut(s) 1210, 1504, 2290
PciI ACATGT 1 cut(s) 1671
PcsI WCGNNNNNNNCGW 2 cut(s) 357, 1172
PctI GAATGC 2 cut(s) 1450, 1663
PdmI GAANNNNTTC 1 cut(s) 1010
PfeI GAWTC 5 cut(s) 136, 807, 899, 1603, 2251
PleI GAGTC 4 cut(s) 448, 586, 674, 1525
PluTI GGCGCC 1 cut(s) 2064
PpsI GAGTC 4 cut(s) 448, 586, 674, 1525
Ppu21I YACGTR 2 cut(s) 750, 1279
PscI ACATGT 1 cut(s) 1671
PshAI GACNNNNGTC 1 cut(s) 542
Psp6I CCWGG 2 cut(s) 1584, 2254
PspFI CCCAGC 1 cut(s) 892
PspGI CCWGG 2 cut(s) 1584, 2254
PspN4I GGNNCC 3 cut(s) 2040, 2062, 2139
PspPI GGNCC 2 cut(s) 829, 1047
PsuI RGATCY 2 cut(s) 111, 2137
RruI TCGCGA 1 cut(s) 167
RsaI GTAC 4 cut(s) 906, 1238, 1277, 1825
RsaNI GTAC 4 cut(s) 905, 1237, 1276, 1824
RseI CAYNNNNRTG 6 cut(s) 590, 972, 1328, 1782, 1853, 2091
SalI GTCGAC 1 cut(s) 347
SaqAI TTAA 7 cut(s) 795, 876, 1257, 1362, 1410, 1694, 2348
Sau3AI GATC 4 cut(s) 111, 142, 768, 2137
Sau96I GGNCC 2 cut(s) 829, 1047
SchI GAGTC 4 cut(s) 448, 587, 675, 1526
ScrFI CCNGG 2 cut(s) 1586, 2256
SduI GDGCHC 2 cut(s) 1560, 1947
SfaNI GCATC 1 cut(s) 976
SfcI CTRYAG 3 cut(s) 228, 1240, 1704
SfoI GGCGCC 1 cut(s) 2062
SfuI TTCGAA 3 cut(s) 295, 1085, 1175
SgrDI CGTCGACG 1 cut(s) 347
SinI GGWCC 2 cut(s) 829, 1047
SmiMI CAYNNNNRTG 6 cut(s) 590, 972, 1328, 1782, 1853, 2091
SmlI CTYRAG 2 cut(s) 789, 875
SmoI CTYRAG 2 cut(s) 789, 875
SnaBI TACGTA 1 cut(s) 750
SspDI GGCGCC 1 cut(s) 2060
SspMI CTAG 4 cut(s) 146, 671, 1353, 2102
StyD4I CCNGG 2 cut(s) 1584, 2254
StyI CCWWGG 2 cut(s) 1621, 1879
TaaI ACNGT 5 cut(s) 29, 238, 1205, 1241, 1544
TaiI ACGT 5 cut(s) 15, 348, 546, 752, 1281
TaqI TCGA 8 cut(s) 20, 295, 348, 374, 843, 1014, 1085, 1175
TatI WGTACW 1 cut(s) 1236
TauI GCSGC 6 cut(s) 156, 357, 699, 1304, 1383, 2306
TfiI GAWTC 5 cut(s) 136, 807, 899, 1603, 2251
Tru1I TTAA 7 cut(s) 795, 876, 1257, 1362, 1410, 1694, 2348
Tru9I TTAA 7 cut(s) 795, 876, 1257, 1362, 1410, 1694, 2348
TscAI CASTG 3 cut(s) 13, 637, 1164
TseFI GTSAC 3 cut(s) 8, 104, 2313
TseI GCWGC 6 cut(s) 61, 269, 357, 1394, 1772, 1875
Tsp45I GTSAC 3 cut(s) 8, 104, 2313
TspGWI ACGGA 5 cut(s) 38, 821, 1018, 1841, 1950
TspRI CASTG 3 cut(s) 13, 637, 1164
Vha464I CTTAAG 1 cut(s) 875
VpaK11BI GGWCC 2 cut(s) 829, 1047
XapI RAATTY 7 cut(s) 609, 1249, 1735, 2071, 2082, 2154, 2294
XceI RCATGY 3 cut(s) 885, 1420, 1675
XmiI GTMKAC 1 cut(s) 348
XmnI GAANNNNTTC 1 cut(s) 1010
XspI CTAG 4 cut(s) 146, 671, 1353, 2102
ZraI GACGTC 2 cut(s) 13, 346
Zsp2I ATGCAT 1 cut(s) 2417
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.