Rw6G029520

pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0008841
Physical Location & Seq
Forward (+)
53628113 .. 53630119
2007 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G029520.1

Sequence Viewer

Length: 2007 bp
ATGAAGTTCCGCTTCCACTCTCTGTTCTCTGCGCAGACTCACAGACCCCAAGTCCTCCACTCACTTCATCAGCGACCAATCTCATCACCCTCAGCCAATAAACCCAAATGGAACTCCAAGACCAACGTCATAATCACCAACCCAACTCTGCTCATCATGGAGTCTTGCACCACCATGCTCCAGTTGAAGCAAATTCAAGCCCAAATGACCTGCACTGGCCTCATTCACCACACCTTTCCCGTCAGCAGAGTCCTAGCCTTCTGTGCTATCGCCGACGGCGGCGACATTCACTACGCTAATCTTATTTTCACGCGCTTTGCAAAACCCAATACTTATATGTGGAACACAATGATCAGAGGCTACTCCAAAGCTCAAGTTAACACAACTGGATTCTCATTTTTCGGCCGAATGGTCCGTGAACGCGTCGAAATGGACTGCCGGAGTTTTGTCTTTGCGCTCAAGGCATGTGGGTTGCTGGGAGATTCGGTACATTGCGTGATTTGGAAGATGGGTTTTGGTTCTGACTCGCTGGTGCGAAATGGGTTGGTGCATTATTATGCTGAAGGCGGGTCCGTGAGTCATGCACGGAAGGTGTTCGATGAAAGTCCTGTGAGGGATGTTGTAACTTGGACCACCATGATTGATGGGTATGCGGGGTGTGGTTATTCGAATGAGGCTGTGGAGTTGTTTGATGAGATGTTGTTGAGTGATGCTGAGCCAAATGAGGTTACTATGATTGCAGTGCTTTCGGCGTGCTCGAATAAGGGGGATATTGGTATGGGGAAGAGTATTCACGAGTATGTGCGAAAGAAGAATGTGAACTGTAGCTTGAATTTGCTTAATGCTTTGTTGGATATGTATGTGAAATGTGGTTGTTTGACTGCGGCGAAAGAGGTTTTTGATGACATGAAAGTGAGGGATGTGTTTACATGGACTAGCATGGTTAATGGATATGCTAAATGCGGCGAGTTAGACGCTGCAAGACAGTTTTTTAATGACATGCCTGATAGAAATGTAGTATCTTGGAATGCAATGATTGCTGGTTATGCTCAGAACAATCAACCTACTGAAGCGGTGAAGTTGTTTCATGACATGGTGGAGTCGGGTTTTGCTCCGATAGAGAACAGTTTAGTATGTGTGCTCTCTGCTTGTGGTCAGTTAAGTTGCCTGGATTTGGGTCGGTGGATTCACCAGTATTATGTCCATGGAAATCATATTCAACTTGGTGTGATTTTGGGGAATGCGTTGATAGACATGTATGCCAAGTGTGGGAGTTTAACTTCTGCTACAGAACTTTTCAATGAAATGCCAGAGAAAAATTTGGTTTCTTGGAATACGATGATTGCTGGATACGCTGCTCATGGCCATGCTAAGCAAGCTCTTACTCTATTCAACCAAATGAAAAGTACGGATACGAAGCCTGACCATATCACATTTGTGGCAGTCTTGTCTGCTTGCAGCCATGGCGGATTAGTTTCTGAAGGCAGAGAGCATTTCAAAAGCATGATTAGGGATTACGGAATAGAGCCCAAAGAGGAAAATTATGCTTGCATGATAGATCTACTTGGAAGAATTGGATTGCTGGAAGAAGCATATGAGTTGATAAACAAAATGCCAATGGAACCGAGTGCGTCTGCATGGGGCGCCCTTCTAAATTCATGTAAAATTCATGGGAATGTTGAGCTAGCTAAGCTTTCTGCTGAGAAACTATTAGACTTGGACCCAGAAGATAGCGGAATTTATGTGTCGCTGGCAAACTTATGCGCTATCAAGCAAAGATGGGTGGATGTAAGAAATGTCAGAAGCCTGATGAAAGAGAGGGGAGTGCAGAAGAATCCTGGGCATAGCTTGATAGAGGTTCAGGGTCAGTTTCATGAATTCTTTGCTGCTGATAAGTCACACCCTCAATCAGAAGAGGTTTATAGAGTTTTAAATGATATGTATATGTTCTCCAAATCGGAGTTATATCTGCAAAAACAATTTGATGAACTTTCATGCATGATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

668

Amino Acids

74.8

Weight (kDa)

6.32

Isoelectric Point (pI)

42.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 205 - 253 8.1e-12 PPR repeat family
PPR_1 PF12854 205 - 233 1e-07 PPR repeat
PPR PF01535 208 - 234 9e-08 PPR repeat
PPR_2 PF13041 306 - 339 2.1e-07 PPR repeat family
PPR_1 PF12854 306 - 334 4.9e-07 PPR repeat
PPR PF01535 309 - 339 4.1e-07 PPR repeat
PPR_2 PF13041 337 - 373 2e-10 PPR repeat family
PPR PF01535 340 - 370 3.2e-09 PPR repeat
PPR_2 PF13041 440 - 487 8e-13 PPR repeat family
PPR PF01535 442 - 469 1.5e-06 PPR repeat
E_motif PF20431 557 - 619 7.2e-16 E motif
Eplus_motif PF20430 625 - 646 2.3e-06 E+ motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 33
Acc36I ACCTGC 1 cut(s) 218
AccB1I GGYRCC 1 cut(s) 1643
AccII CGCG 2 cut(s) 313, 423
AciI CCGC 9 cut(s) 10, 279, 567, 653, 884, 963, 1073, 1467, 1734
AcoI YGGCCR 2 cut(s) 403, 1363
AcsI RAATTY 7 cut(s) 192, 832, 1318, 1654, 1665, 1737, 1877
AcuI CTGAAG 3 cut(s) 582, 1089, 1500
AcyI GRCGYC 1 cut(s) 1644
AfaI GTAC 2 cut(s) 489, 1408
AfiI CCNNNNNNNGG 2 cut(s) 1174, 1269
AflIII ACRYGT 2 cut(s) 421, 1254
AgsI TTSAA 7 cut(s) 187, 197, 832, 1220, 1300, 1393, 1498
AhdI GACNNNNNGTC 1 cut(s) 50
AjnI CCWGG 2 cut(s) 1167, 1837
AleI CACNNNNGTG 1 cut(s) 1436
AluBI AGCT 7 cut(s) 371, 828, 1379, 1684, 1688, 1693, 1848
AluI AGCT 7 cut(s) 371, 828, 1379, 1684, 1688, 1693, 1848
Alw21I GWGCWC 2 cut(s) 758, 1143
AoxI GGCC 3 cut(s) 217, 403, 1363
ApeKI GCWGC 4 cut(s) 977, 1355, 1458, 1886
ApoI RAATTY 7 cut(s) 192, 832, 1318, 1654, 1665, 1737, 1877
Asp700I GAANNNNTTC 1 cut(s) 593
AspLEI GCGC 5 cut(s) 34, 315, 457, 1646, 1766
AspS9I GGNCC 4 cut(s) 412, 570, 630, 1720
AsuHPI GGTGA 5 cut(s) 78, 127, 218, 1087, 1181
AsuII TTCGAA 1 cut(s) 668
AsuNHI GCTAGC 1 cut(s) 1684
AvaII GGWCC 4 cut(s) 412, 570, 630, 1720
BalI TGGCCA 1 cut(s) 1365
BanI GGYRCC 1 cut(s) 1643
BanII GRGCYC 1 cut(s) 1530
BauI CACGAG 1 cut(s) 794
Bbv12I GWGCWC 2 cut(s) 758, 1143
BbvCI CCTCAGC 1 cut(s) 91
BbvI GCAGC 4 cut(s) 964, 1342, 1470, 1873
BccI CCATC 3 cut(s) 502, 638, 1773
BceAI ACGGC 1 cut(s) 292
BcgI CGANNNNNNTGC 2 cut(s) 729, 763
BciT130I CCWGG 2 cut(s) 1169, 1839
BciVI GTATCC 2 cut(s) 1343, 1405
BclI TGATCA 1 cut(s) 351
BfaI CTAG 3 cut(s) 254, 936, 1685
BfmI CTRYAG 2 cut(s) 823, 1287
BfoI RGCGCY 1 cut(s) 1647
BfuAI ACCTGC 1 cut(s) 218
BfuI GTATCC 2 cut(s) 1343, 1405
BglII AGATCT 1 cut(s) 1558
BisI GCNGC 7 cut(s) 280, 885, 964, 978, 1356, 1459, 1887
BlpI GCTNAGC 3 cut(s) 714, 1371, 1689
BlsI GCNGC 7 cut(s) 281, 886, 965, 979, 1357, 1460, 1888
Bme1390I CCNGG 2 cut(s) 1169, 1839
Bme18I GGWCC 4 cut(s) 412, 570, 630, 1720
BmeRI GACNNNNNGTC 1 cut(s) 50
BmgT120I GGNCC 4 cut(s) 412, 570, 630, 1720
BmiI GGNNCC 4 cut(s) 571, 1623, 1645, 1722
BmrFI CCNGG 2 cut(s) 1169, 1839
BmsI GCATC 1 cut(s) 700
BmtI GCTAGC 1 cut(s) 1688
BoxI GACNNNNGTC 1 cut(s) 125
BpmI CTGGAG 1 cut(s) 164
Bpu10I CCTNAGC 1 cut(s) 91
Bpu1102I GCTNAGC 3 cut(s) 714, 1371, 1689
Bpu14I TTCGAA 1 cut(s) 668
BpuEI CTTGAG 2 cut(s) 357, 443
BsaHI GRCGYC 1 cut(s) 1644
BsaJI CCNNGG 3 cut(s) 1204, 1462, 1838
BsaXI ACNNNNNCTCC 2 cut(s) 471, 501
Bsc4I CCNNNNNNNGG 2 cut(s) 1174, 1269
Bse1I ACTGG 4 cut(s) 181, 220, 391, 1192
Bse3DI GCAATG 2 cut(s) 490, 1038
BseBI CCWGG 2 cut(s) 1169, 1839
BseDI CCNNGG 3 cut(s) 1204, 1462, 1838
BseGI GGATG 3 cut(s) 622, 925, 1792
BseLI CCNNNNNNNGG 2 cut(s) 1174, 1269
BseMI GCAATG 2 cut(s) 490, 1038
BseMII CTCAG 4 cut(s) 105, 705, 1064, 1692
BseNI ACTGG 4 cut(s) 181, 220, 391, 1192
BseX3I CGGCCG 1 cut(s) 403
BseXI GCAGC 4 cut(s) 964, 1342, 1470, 1873
BseYI CCCAGC 1 cut(s) 475
BsgI GTGCAG 2 cut(s) 196, 1847
Bsh1236I CGCG 2 cut(s) 313, 423
Bsh1285I CGRYCG 1 cut(s) 406
BshFI GGCC 3 cut(s) 219, 405, 1365
BshNI GGYRCC 1 cut(s) 1643
BsiEI CGRYCG 1 cut(s) 406
BsiHKAI GWGCWC 2 cut(s) 758, 1143
BsiSI CCGG 1 cut(s) 439
BslI CCNNNNNNNGG 2 cut(s) 1174, 1269
BsmI GAATGC 2 cut(s) 1033, 1246
BsnI GGCC 3 cut(s) 219, 405, 1365
Bsp119I TTCGAA 1 cut(s) 668
Bsp1286I GDGCHC 3 cut(s) 758, 1143, 1530
Bsp143I GATC 2 cut(s) 351, 1558
Bsp1720I GCTNAGC 3 cut(s) 714, 1371, 1689
Bsp19I CCATGG 2 cut(s) 1204, 1462
BspACI CCGC 9 cut(s) 10, 279, 567, 653, 884, 963, 1073, 1467, 1734
BspANI GGCC 3 cut(s) 219, 405, 1365
BspCNI CTCAG 4 cut(s) 104, 706, 1063, 1693
BspFNI CGCG 2 cut(s) 313, 423
BspHI TCATGA 2 cut(s) 1087, 1873
BspLI GGNNCC 4 cut(s) 571, 1623, 1645, 1722
BspMI ACCTGC 1 cut(s) 218
BspOI GCTAGC 1 cut(s) 1688
BspT104I TTCGAA 1 cut(s) 668
BspT107I GGYRCC 1 cut(s) 1643
BsrDI GCAATG 2 cut(s) 490, 1038
BsrI ACTGG 4 cut(s) 181, 220, 391, 1192
BssECI CCNNGG 3 cut(s) 1204, 1462, 1838
BssMI GATC 2 cut(s) 351, 1558
BssNI GRCGYC 1 cut(s) 1644
BssSI CACGAG 1 cut(s) 794
BssT1I CCWWGG 2 cut(s) 1204, 1462
Bst2BI CACGAG 1 cut(s) 794
Bst2UI CCWGG 2 cut(s) 1169, 1839
Bst4CI ACNGT 3 cut(s) 824, 987, 1127
Bst6I CTCTTC 2 cut(s) 779, 1908
BstACI GRCGYC 1 cut(s) 1644
BstAPI GCANNNNNTGC 1 cut(s) 1037
BstBI TTCGAA 1 cut(s) 668
BstC8I GCNNGC 6 cut(s) 754, 1377, 1456, 1549, 1686, 1752
BstDEI CTNAG 6 cut(s) 91, 714, 1050, 1371, 1689, 1701
BstDSI CCRYGG 2 cut(s) 1204, 1462
BstF5I GGATG 3 cut(s) 622, 925, 1792
BstFNI CGCG 2 cut(s) 313, 423
BstH2I RGCGCY 1 cut(s) 1647
BstHHI GCGC 5 cut(s) 34, 315, 457, 1646, 1766
BstKTI GATC 2 cut(s) 354, 1561
BstMBI GATC 2 cut(s) 351, 1558
BstMCI CGRYCG 1 cut(s) 406
BstMWI GCNNNNNNNGC 9 cut(s) 263, 461, 1037, 1046, 1352, 1376, 1464, 1643, 1690
BstNI CCWGG 2 cut(s) 1169, 1839
BstNSI RCATGY 3 cut(s) 468, 1003, 1258
BstPAI GACNNNNGTC 1 cut(s) 125
BstSCI CCNGG 2 cut(s) 1167, 1837
BstSFI CTRYAG 2 cut(s) 823, 1287
BstUI CGCG 2 cut(s) 313, 423
BstV1I GCAGC 4 cut(s) 964, 1342, 1470, 1873
BstX2I RGATCY 1 cut(s) 1558
BstYI RGATCY 1 cut(s) 1558
BstZI CGGCCG 1 cut(s) 403
BsuI GTATCC 2 cut(s) 1343, 1405
BsuRI GGCC 3 cut(s) 219, 405, 1365
BtgI CCRYGG 2 cut(s) 1204, 1462
BtsCI GGATG 3 cut(s) 622, 925, 1792
BtsI GCAGTG 1 cut(s) 747
BtsIMutI CAGTG 2 cut(s) 213, 747
BveI ACCTGC 1 cut(s) 218
Cac8I GCNNGC 6 cut(s) 754, 1377, 1456, 1549, 1686, 1752
CciI TCATGA 2 cut(s) 1087, 1873
CfoI GCGC 5 cut(s) 34, 315, 457, 1646, 1766
Cfr13I GGNCC 4 cut(s) 412, 570, 630, 1720
CseI GACGC 3 cut(s) 412, 983, 1620
Csp6I GTAC 2 cut(s) 488, 1407
CspCI CAANNNNNGTGG 4 cut(s) 448, 483, 622, 657
CviQI GTAC 2 cut(s) 488, 1407
DdeI CTNAG 6 cut(s) 91, 714, 1050, 1371, 1689, 1701
DinI GGCGCC 1 cut(s) 1645
DpnI GATC 2 cut(s) 353, 1560
DpnII GATC 2 cut(s) 351, 1558
DraI TTTAAA 1 cut(s) 1932
DriI GACNNNNNGTC 1 cut(s) 50
EaeI YGGCCR 2 cut(s) 403, 1363
EagI CGGCCG 1 cut(s) 403
Eam1104I CTCTTC 2 cut(s) 779, 1908
Eam1105I GACNNNNNGTC 1 cut(s) 50
EarI CTCTTC 2 cut(s) 779, 1908
EciI GGCGGA 1 cut(s) 1482
EclXI CGGCCG 1 cut(s) 403
Eco130I CCWWGG 2 cut(s) 1204, 1462
Eco24I GRGCYC 1 cut(s) 1530
Eco47I GGWCC 4 cut(s) 412, 570, 630, 1720
Eco52I CGGCCG 1 cut(s) 403
Eco57I CTGAAG 3 cut(s) 582, 1089, 1500
EcoRI GAATTC 1 cut(s) 1877
EcoRII CCWGG 2 cut(s) 1167, 1837
EcoT14I CCWWGG 2 cut(s) 1204, 1462
EcoT22I ATGCAT 1 cut(s) 2000
EcoT38I GRGCYC 1 cut(s) 1530
EgeI GGCGCC 1 cut(s) 1645
EheI GGCGCC 1 cut(s) 1645
ErhI CCWWGG 2 cut(s) 1204, 1462
FalI AAGNNNNNCTT 1 cut(s) 28
FauI CCCGC 2 cut(s) 560, 646
FauNDI CATATG 1 cut(s) 1594
FbaI TGATCA 1 cut(s) 351
Fnu4HI GCNGC 7 cut(s) 280, 885, 964, 978, 1356, 1459, 1887
FokI GGATG 3 cut(s) 629, 932, 1799
FriOI GRGCYC 1 cut(s) 1530
Fsp4HI GCNGC 7 cut(s) 280, 885, 964, 978, 1356, 1459, 1887
FspBI CTAG 3 cut(s) 254, 936, 1685
FspI TGCGCA 1 cut(s) 33
GlaI GCGC 5 cut(s) 33, 314, 456, 1645, 1765
GluI GCNGC 7 cut(s) 280, 885, 964, 978, 1356, 1459, 1887
GsaI CCCAGC 1 cut(s) 479
GsuI CTGGAG 1 cut(s) 164
HaeII RGCGCY 1 cut(s) 1647
HaeIII GGCC 3 cut(s) 219, 405, 1365
HapII CCGG 1 cut(s) 439
HgaI GACGC 3 cut(s) 412, 983, 1620
HhaI GCGC 5 cut(s) 34, 315, 457, 1646, 1766
Hin1I GRCGYC 1 cut(s) 1644
Hin6I GCGC 5 cut(s) 32, 313, 455, 1644, 1764
HinP1I GCGC 5 cut(s) 32, 313, 455, 1644, 1764
HincII GTYRAC 1 cut(s) 379
HindII GTYRAC 1 cut(s) 379
HindIII AAGCTT 1 cut(s) 1691
HpaI GTTAAC 1 cut(s) 379
HpaII CCGG 1 cut(s) 439
HphI GGTGA 5 cut(s) 78, 127, 218, 1087, 1181
Hpy166II GTNNAC 4 cut(s) 379, 419, 820, 927
Hpy188I TCNGA 8 cut(s) 356, 523, 1053, 1116, 1480, 1802, 1912, 1960
Hpy188III TCNNGA 3 cut(s) 794, 1088, 1874
Hpy8I GTNNAC 4 cut(s) 379, 419, 820, 927
Hpy99I CGWCG 2 cut(s) 278, 428
HpyAV CCTTC 5 cut(s) 268, 557, 583, 1475, 1658
HpyCH4III ACNGT 3 cut(s) 824, 987, 1127
HpyCH4IV ACGT 1 cut(s) 126
HpyF10VI GCNNNNNNNGC 9 cut(s) 263, 461, 1037, 1046, 1352, 1376, 1464, 1643, 1690
HpyF3I CTNAG 6 cut(s) 91, 714, 1050, 1371, 1689, 1701
HpySE526I ACGT 1 cut(s) 126
Hsp92I GRCGYC 1 cut(s) 1644
HspAI GCGC 5 cut(s) 32, 313, 455, 1644, 1764
KasI GGCGCC 1 cut(s) 1643
Ksp22I TGATCA 1 cut(s) 351
KspAI GTTAAC 1 cut(s) 379
Kzo9I GATC 2 cut(s) 351, 1558
LmnI GCTCC 2 cut(s) 183, 1117
Lsp1109I GCAGC 4 cut(s) 964, 1342, 1470, 1873
LweI GCATC 1 cut(s) 700
MaeI CTAG 3 cut(s) 254, 936, 1685
MaeII ACGT 1 cut(s) 126
MaeIII GTNAC 3 cut(s) 622, 727, 1896
MalI GATC 2 cut(s) 353, 1560
MboI GATC 2 cut(s) 351, 1558
MboII GAAGA 8 cut(s) 517, 796, 823, 1581, 1598, 1739, 1843, 1925
MflI RGATCY 1 cut(s) 1558
MhlI GDGCHC 3 cut(s) 758, 1143, 1530
MlsI TGGCCA 1 cut(s) 1365
MluI ACGCGT 1 cut(s) 421
MluNI TGGCCA 1 cut(s) 1365
Mly113I GGCGCC 1 cut(s) 1644
MlyI GAGTC 6 cut(s) 31, 170, 258, 518, 586, 1109
MmeI TCCRAC 1 cut(s) 831
Mox20I TGGCCA 1 cut(s) 1365
Mph1103I ATGCAT 1 cut(s) 2000
MroXI GAANNNNTTC 1 cut(s) 593
MscI TGGCCA 1 cut(s) 1365
MseI TTAA 7 cut(s) 378, 840, 945, 993, 1160, 1277, 1931
MslI CAYNNNNRTG 7 cut(s) 173, 555, 798, 911, 1365, 1436, 1674
Msp20I TGGCCA 1 cut(s) 1365
MspI CCGG 1 cut(s) 439
MspR9I CCNGG 2 cut(s) 1169, 1839
Mva1269I GAATGC 2 cut(s) 1033, 1246
MvaI CCWGG 2 cut(s) 1169, 1839
MvnI CGCG 2 cut(s) 313, 423
MwoI GCNNNNNNNGC 9 cut(s) 263, 461, 1037, 1046, 1352, 1376, 1464, 1643, 1690
NarI GGCGCC 1 cut(s) 1644
NcoI CCATGG 2 cut(s) 1204, 1462
NdeI CATATG 1 cut(s) 1594
NdeII GATC 2 cut(s) 351, 1558
NheI GCTAGC 1 cut(s) 1684
NlaIV GGNNCC 4 cut(s) 571, 1623, 1645, 1722
NmuCI GTSAC 1 cut(s) 1896
NsbI TGCGCA 1 cut(s) 33
NsiI ATGCAT 1 cut(s) 2000
NspI RCATGY 3 cut(s) 468, 1003, 1258
NspV TTCGAA 1 cut(s) 668
OliI CACNNNNGTG 1 cut(s) 1436
PagI TCATGA 2 cut(s) 1087, 1873
PciI ACATGT 1 cut(s) 1254
PcsI WCGNNNNNNNCGW 1 cut(s) 755
PctI GAATGC 2 cut(s) 1033, 1246
PdmI GAANNNNTTC 1 cut(s) 593
PfeI GAWTC 4 cut(s) 390, 482, 1186, 1834
PkrI GCNGC 7 cut(s) 281, 886, 965, 979, 1357, 1460, 1888
PleI GAGTC 6 cut(s) 31, 169, 257, 518, 585, 1108
PluTI GGCGCC 1 cut(s) 1647
PpsI GAGTC 6 cut(s) 31, 169, 257, 518, 585, 1108
PscI ACATGT 1 cut(s) 1254
PshAI GACNNNNGTC 1 cut(s) 125
Psp6I CCWGG 2 cut(s) 1167, 1837
PspFI CCCAGC 1 cut(s) 475
PspGI CCWGG 2 cut(s) 1167, 1837
PspN4I GGNNCC 4 cut(s) 571, 1623, 1645, 1722
PspPI GGNCC 4 cut(s) 412, 570, 630, 1720
PsuI RGATCY 1 cut(s) 1558
RsaI GTAC 2 cut(s) 489, 1408
RsaNI GTAC 2 cut(s) 488, 1407
RseI CAYNNNNRTG 7 cut(s) 173, 555, 798, 911, 1365, 1436, 1674
SaqAI TTAA 7 cut(s) 378, 840, 945, 993, 1160, 1277, 1931
SatI GCNGC 7 cut(s) 280, 885, 964, 978, 1356, 1459, 1887
Sau3AI GATC 2 cut(s) 351, 1558
Sau96I GGNCC 4 cut(s) 412, 570, 630, 1720
SchI GAGTC 6 cut(s) 31, 170, 258, 518, 586, 1109
ScrFI CCNGG 2 cut(s) 1169, 1839
SduI GDGCHC 3 cut(s) 758, 1143, 1530
SfaNI GCATC 1 cut(s) 700
SfcI CTRYAG 2 cut(s) 823, 1287
SfoI GGCGCC 1 cut(s) 1645
SfuI TTCGAA 1 cut(s) 668
SinI GGWCC 4 cut(s) 412, 570, 630, 1720
SmiMI CAYNNNNRTG 7 cut(s) 173, 555, 798, 911, 1365, 1436, 1674
SmlI CTYRAG 2 cut(s) 372, 458
SmoI CTYRAG 2 cut(s) 372, 458
SsiI CCGC 9 cut(s) 10, 279, 567, 653, 884, 963, 1073, 1467, 1734
SspDI GGCGCC 1 cut(s) 1643
SspMI CTAG 3 cut(s) 254, 936, 1685
StyD4I CCNGG 2 cut(s) 1167, 1837
StyI CCWWGG 2 cut(s) 1204, 1462
TaaI ACNGT 3 cut(s) 824, 987, 1127
TaiI ACGT 1 cut(s) 129
TaqI TCGA 4 cut(s) 426, 597, 668, 758
TauI GCSGC 3 cut(s) 282, 887, 966
TfiI GAWTC 4 cut(s) 390, 482, 1186, 1834
Tru1I TTAA 7 cut(s) 378, 840, 945, 993, 1160, 1277, 1931
Tru9I TTAA 7 cut(s) 378, 840, 945, 993, 1160, 1277, 1931
TscAI CASTG 2 cut(s) 220, 747
TseFI GTSAC 1 cut(s) 1896
TseI GCWGC 4 cut(s) 977, 1355, 1458, 1886
Tsp45I GTSAC 1 cut(s) 1896
TspGWI ACGGA 5 cut(s) 404, 562, 601, 1424, 1533
TspRI CASTG 2 cut(s) 220, 747
VpaK11BI GGWCC 4 cut(s) 412, 570, 630, 1720
XapI RAATTY 7 cut(s) 192, 832, 1318, 1654, 1665, 1737, 1877
XceI RCATGY 3 cut(s) 468, 1003, 1258
XmnI GAANNNNTTC 1 cut(s) 593
XspI CTAG 3 cut(s) 254, 936, 1685
Zsp2I ATGCAT 1 cut(s) 2000
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.