RchiOBHm_Chr7g0192571

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0018438
Physical Location & Seq
Forward (+)
10999427 .. 11001750
2324 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17214

Sequence Viewer

Length: 2112 bp
ATGGTTTTAACAACCCTTCCTATCTCCATCTCTCCCGCCAAAGCTCTAACCGCCATAACTGTAATACCCCAATTCCCACAAAACCCTAAAACCCTAATCCTCCACCGATGCAAAACCACCAGAGACCTCAACCAAGTCCACGCCCATCTCATCAAAACCCGCCTCCTCCTCAACCCAGCCATCACCGAAAACCTCCTCGAATCCGCCGCGTTGATTCTCCCCAATGCCATGGACTATGCTCTCTCCATTTTCGACAATCTCGAACAACCCGATTCCTTGGCTTATAACATCATCATCAGAAGCCTCACCTTCAAGCAATCCCCTCTAAATGCCATTGTTCTGTTCAACAAAATGGTCGAAAACTCTGTCCAACCCGACGAGTTCACTTTTTCGAGTGTCCTGAAAGCTTGTTCTAGAGTAAGGGCACTGGGGGAAGGAGAGCAGGTTCATGCCCACATCGTGAAATGTGGTTTCAAGTCAAATGGGTTCGTTGTGAACACTTTGATTCACGTGTATGCGACTTGTGGTGAGCTTGAGGTTGCCCGCCAGGTGTTCGATGGATTGCCTGAGAGAAATGTTATGGCTTGGAATTCAATGCTGGCCGGTTACGTGAAGAATGAGCGTTGGGGCGAGGTTGTGGAGCTGTTTCGTAAAATGTTGGAGTCGGATATTGGGTTTGATGGGGTTACATTGATCAGTGTTTTGACAGCGTGTGGGAGAGTGGCGAATTTGGAACTGGGAGAGTGGATTGGTGAGTATATAGAGGCAAATGGATTGAAGGGTAACATTGCTTTGGTTACTTCTCTGGTAGATATGTATGCAAAATGTGGTAAAGTGGATAAAGCAAGACGAATATTTGATGGAATGGACAGGAGAGATGTTATTGCATGGAGCGCGATGATTTCTGGTTATGGTCAAGCAAATAGATGCAGGGAGGCGCTTGATCTGTTTCACGACATGCAAAAGGCAAATGTAGATCCTAATGAGGTTACAATGGTTAGTGTGCTGTACTCCTGTGGTGTTCTTGGAGCTTTGGATACTGGTAAATGGATCGACTTTTATGTAAAGAAGAAGAAAATGAAGCTTACTGTTACCCTCGGAACTGCATTGATAGATTTCTATGCAAAATGTGGTTGTGTGGATGATTCAGTTGAAGTGTTTAATAGAATGCCTTCAGTAAACGTCTTCTCCTGGACAGCACTAATTCAAGGACTCGCTAGTAACGGACAGGGGAAAAGGGCTCTTGAGTACTTCAAATTGATGCAGGAGAAGAACATCAAACCAAATGATGTGACTTTTATTGCGGTTCTTTCTGCTTGTAGTCATGCAGGTTTGGTTGACGAGGGTCGAAATCTTTTTGTCAGCATGAACAATGATTTTGGAATTGAACCAAGGATTGAGCACTACGGTTCTATGGTTGATATCTTGGGTCGAGCTGGGTTGATTGAAGAGGCATATCAGTTCATCAGGAACATGCCTATCCAACCCAATGCTGTTGTTTGGAGGACATTATTGGCTTCATGCAGAGCAAAGAAAAATGTTGAAATTGGCGAAGAAGCATTGCAACAGATAATCAGATTGGAGAACCCTCATAGCGGTGACTACATACTTCTGTCCAACATTTATGCATCTGCTGGTAGGCGCGGGGACGCTCTTAGAGTGAGAAATCAAATGAAAGAGGAGAGAATAGAGAAGGTGGCTCCTGGATGTAGCTTGATTCAGGTGGATGGAACGATTTATGAGTTCTTTGCAGAGAACAAGGTATATCCACACTCTGAGGAGGTTTACAATGCTACTCATGACATGATGAAACAGATCGAGGCAGCTGGTTATGTGCCCAACACAGCAGATGGGAGACTAGATGCAGAAGAAGATGATATGCAGCAAGCTTCAGTTTCTCACCATAGTGAGAAGCTGGCCATTGCATTTGGTCTTATCAGAACACGTCCTGGAACGACACTTCGAATATTGAAAAATCTTCGAGTTTGTACGGACTGCCACAATGCAACGAAGATAATATCAAAGGTTTTTAACAGAGAAATTATTGTTAGGGACTGGAACCGCTTCCATCATTTCAAAGAAGGGTCATGTTCCTGCAATGACTATTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

703

Amino Acids

78.72

Weight (kDa)

6.52

Isoelectric Point (pI)

39.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 90 - 138 1.7e-10 PPR repeat family
PPR_2 PF13041 191 - 239 4e-07 PPR repeat family
PPR PF01535 195 - 224 1.4e-06 PPR repeat
PPR_2 PF13041 292 - 337 4e-11 PPR repeat family
PPR PF01535 296 - 324 1.6e-07 PPR repeat
PPR_3 PF13812 393 - 440 7.3e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 394 - 441 2.9e-11 PPR repeat family
PPR PF01535 396 - 426 1.5e-06 PPR repeat
E_motif PF20431 513 - 574 7.8e-18 E motif
DYW_deaminase PF14432 610 - 703 8e-37 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0018438)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g06290
malus_domestica MD14G1171500.v1.1
prunus_persica Prupe.5G165600_v2.0.a1
pyrus_communis pycom14g14320
rosa_chinensis RchiOBHm_Chr7g0192571
rosa_laevigata RLG00000004351
rosa_multiflora Rmu_sc0003108.1_g000042
rosa_rugosa Rorug07G0002200
rosa_samantha Rh7BG129100
rosa_wichuraiana Rw7G010890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 285
Acc36I ACCTGC 2 cut(s) 433, 1319
AccII CGCG 3 cut(s) 209, 896, 1644
AclWI GGATC 2 cut(s) 971, 1058
AcoI YGGCCR 2 cut(s) 600, 1917
AcsI RAATTY 2 cut(s) 589, 727
AcuI CTGAAG 2 cut(s) 1158, 1875
AcvI CACGTG 1 cut(s) 511
AdeI CACNNNGTG 1 cut(s) 460
AfaI GTAC 3 cut(s) 1010, 1250, 1990
AfiI CCNNNNNNNGG 1 cut(s) 1595
AflIII ACRYGT 2 cut(s) 510, 1943
AjiI CACGTC 1 cut(s) 1946
AjnI CCWGG 4 cut(s) 546, 1190, 1702, 1948
AleI CACNNNNGTG 1 cut(s) 1905
AloI GAACNNNNNNTCC 2 cut(s) 429, 461
Alw21I GWGCWC 1 cut(s) 1404
Alw26I GTCTC 2 cut(s) 117, 1849
AlwI GGATC 2 cut(s) 971, 1058
AoxI GGCC 2 cut(s) 600, 1917
ApeKI GCWGC 2 cut(s) 1823, 1882
ApoI RAATTY 2 cut(s) 589, 727
ArsI GACNNNNNNTTYG 2 cut(s) 351, 383
Asp700I GAANNNNTTC 2 cut(s) 1171, 2063
AspLEI GCGC 3 cut(s) 896, 940, 1644
AsuHPI GGTGA 6 cut(s) 175, 298, 539, 764, 1610, 1892
AsuII TTCGAA 1 cut(s) 1963
BaeGI GKGCMC 2 cut(s) 427, 1839
BalI TGGCCA 1 cut(s) 1919
BanII GRGCYC 1 cut(s) 1243
BbrPI CACGTG 1 cut(s) 511
BbsI GAAGAC 1 cut(s) 1177
Bbv12I GWGCWC 1 cut(s) 1404
BbvI GCAGC 2 cut(s) 1835, 1894
BccI CCATC 9 cut(s) 35, 153, 188, 551, 674, 854, 1721, 1844, 2076
BciT130I CCWGG 4 cut(s) 548, 1192, 1704, 1950
BciVI GTATCC 1 cut(s) 1030
BclI TGATCA 1 cut(s) 693
BcoDI GTCTC 2 cut(s) 117, 1849
BfaI CTAG 3 cut(s) 414, 1218, 1859
BfoI RGCGCY 1 cut(s) 941
BfuAI ACCTGC 2 cut(s) 433, 1319
BfuI GTATCC 1 cut(s) 1030
BisI GCNGC 3 cut(s) 207, 1824, 1883
BlsI GCNGC 3 cut(s) 208, 1825, 1884
BmcAI AGTACT 1 cut(s) 1250
Bme1390I CCNGG 4 cut(s) 548, 1192, 1704, 1950
BmgBI CACGTC 1 cut(s) 1946
BmiI GGNNCC 2 cut(s) 1701, 2060
BmrFI CCNGG 4 cut(s) 548, 1192, 1704, 1950
BmrI ACTGGG 2 cut(s) 437, 746
BmsI GCATC 5 cut(s) 98, 917, 1251, 1637, 1852
BmuI ACTGGG 2 cut(s) 437, 746
BoxI GACNNNNGTC 1 cut(s) 1344
BpiI GAAGAC 1 cut(s) 1177
Bpu14I TTCGAA 1 cut(s) 1963
BpuEI CTTGAG 2 cut(s) 554, 1265
BsaAI YACGTR 2 cut(s) 511, 610
BsaI GGTCTC 1 cut(s) 117
BsaJI CCNNGG 4 cut(s) 228, 276, 1096, 1391
BsaXI ACNNNNNCTCC 4 cut(s) 429, 459, 1172, 1202
Bsc4I CCNNNNNNNGG 1 cut(s) 1595
Bse118I RCCGGY 1 cut(s) 602
Bse1I ACTGG 4 cut(s) 432, 741, 1045, 2060
Bse3DI GCAATG 4 cut(s) 786, 1559, 1920, 2104
BseBI CCWGG 4 cut(s) 548, 1192, 1704, 1950
BseDI CCNNGG 4 cut(s) 228, 276, 1096, 1391
BseGI GGATG 3 cut(s) 1147, 1712, 1732
BseLI CCNNNNNNNGG 1 cut(s) 1595
BseMI GCAATG 4 cut(s) 786, 1559, 1920, 2104
BseMII CTCAG 2 cut(s) 558, 1767
BseNI ACTGG 4 cut(s) 432, 741, 1045, 2060
BseRI GAGGAG 5 cut(s) 155, 158, 185, 1694, 1793
BseSI GKGCMC 2 cut(s) 427, 1839
BseXI GCAGC 2 cut(s) 1835, 1894
BseYI CCCAGC 2 cut(s) 175, 1436
Bsh1236I CGCG 3 cut(s) 209, 896, 1644
BshFI GGCC 2 cut(s) 602, 1919
BsiHKAI GWGCWC 1 cut(s) 1404
BsiSI CCGG 1 cut(s) 603
BslFI GGGAC 2 cut(s) 1661, 2066
BslI CCNNNNNNNGG 1 cut(s) 1595
BsmAI GTCTC 2 cut(s) 117, 1849
BsmFI GGGAC 2 cut(s) 1661, 2066
BsmI GAATGC 1 cut(s) 1173
BsnI GGCC 2 cut(s) 602, 1919
Bso31I GGTCTC 1 cut(s) 117
Bsp119I TTCGAA 1 cut(s) 1963
Bsp1286I GDGCHC 4 cut(s) 427, 1243, 1404, 1839
Bsp143I GATC 5 cut(s) 693, 943, 976, 1050, 1815
Bsp19I CCATGG 1 cut(s) 228
BspANI GGCC 2 cut(s) 602, 1919
BspCNI CTCAG 2 cut(s) 559, 1768
BspFNI CGCG 3 cut(s) 209, 896, 1644
BspHI TCATGA 1 cut(s) 1798
BspLI GGNNCC 2 cut(s) 1701, 2060
BspMI ACCTGC 2 cut(s) 433, 1319
BspPI GGATC 2 cut(s) 971, 1058
BspT104I TTCGAA 1 cut(s) 1963
BspTNI GGTCTC 1 cut(s) 117
BsrDI GCAATG 4 cut(s) 786, 1559, 1920, 2104
BsrFI RCCGGY 1 cut(s) 602
BsrI ACTGG 4 cut(s) 432, 741, 1045, 2060
BssAI RCCGGY 1 cut(s) 602
BssECI CCNNGG 4 cut(s) 228, 276, 1096, 1391
BssMI GATC 5 cut(s) 693, 943, 976, 1050, 1815
BssT1I CCWWGG 3 cut(s) 228, 276, 1391
Bst2UI CCWGG 4 cut(s) 548, 1192, 1704, 1950
Bst4CI ACNGT 3 cut(s) 61, 1090, 1409
Bst6I CTCTTC 1 cut(s) 1443
BstBAI YACGTR 2 cut(s) 511, 610
BstBI TTCGAA 1 cut(s) 1963
BstC8I GCNNGC 4 cut(s) 544, 600, 1887, 1917
BstDEI CTNAG 3 cut(s) 567, 1655, 1776
BstDSI CCRYGG 1 cut(s) 228
BstF5I GGATG 3 cut(s) 1147, 1712, 1732
BstFNI CGCG 3 cut(s) 209, 896, 1644
BstH2I RGCGCY 1 cut(s) 941
BstHHI GCGC 3 cut(s) 896, 940, 1644
BstKTI GATC 5 cut(s) 696, 946, 979, 1053, 1818
BstMAI GTCTC 2 cut(s) 117, 1849
BstMBI GATC 5 cut(s) 693, 943, 976, 1050, 1815
BstMWI GCNNNNNNNGC 2 cut(s) 50, 893
BstNI CCWGG 4 cut(s) 548, 1192, 1704, 1950
BstNSI RCATGY 2 cut(s) 961, 1477
BstPAI GACNNNNGTC 1 cut(s) 1344
BstSCI CCNGG 4 cut(s) 546, 1190, 1702, 1948
BstSLI GKGCMC 2 cut(s) 427, 1839
BstUI CGCG 3 cut(s) 209, 896, 1644
BstV1I GCAGC 2 cut(s) 1835, 1894
BstV2I GAAGAC 1 cut(s) 1177
BstX2I RGATCY 1 cut(s) 976
BstXI CCANNNNNNTGG 1 cut(s) 229
BstYI RGATCY 1 cut(s) 976
BsuI GTATCC 1 cut(s) 1030
BsuRI GGCC 2 cut(s) 602, 1919
BtgI CCRYGG 1 cut(s) 228
BtgZI GCGATG 1 cut(s) 911
BtrI CACGTC 1 cut(s) 1946
BtsCI GGATG 3 cut(s) 1147, 1712, 1732
BtsIMutI CAGTG 2 cut(s) 425, 703
BveI ACCTGC 2 cut(s) 433, 1319
Cac8I GCNNGC 4 cut(s) 544, 600, 1887, 1917
CciI TCATGA 1 cut(s) 1798
CfoI GCGC 3 cut(s) 896, 940, 1644
Cfr10I RCCGGY 1 cut(s) 602
CseI GACGC 1 cut(s) 1658
Csp6I GTAC 3 cut(s) 1009, 1249, 1989
CviQI GTAC 3 cut(s) 1009, 1249, 1989
DdeI CTNAG 3 cut(s) 567, 1655, 1776
DpnI GATC 5 cut(s) 695, 945, 978, 1052, 1817
DpnII GATC 5 cut(s) 693, 943, 976, 1050, 1815
DraIII CACNNNGTG 1 cut(s) 460
EaeI YGGCCR 2 cut(s) 600, 1917
Eam1104I CTCTTC 1 cut(s) 1443
EarI CTCTTC 1 cut(s) 1443
EciI GGCGGA 1 cut(s) 193
Eco130I CCWWGG 3 cut(s) 228, 276, 1391
Eco24I GRGCYC 1 cut(s) 1243
Eco31I GGTCTC 1 cut(s) 117
Eco32I GATATC 1 cut(s) 1423
Eco57I CTGAAG 2 cut(s) 1158, 1875
Eco72I CACGTG 1 cut(s) 511
EcoRI GAATTC 1 cut(s) 589
EcoRII CCWGG 4 cut(s) 546, 1190, 1702, 1948
EcoRV GATATC 1 cut(s) 1423
EcoT14I CCWWGG 3 cut(s) 228, 276, 1391
EcoT22I ATGCAT 1 cut(s) 1630
EcoT38I GRGCYC 1 cut(s) 1243
ErhI CCWWGG 3 cut(s) 228, 276, 1391
FaqI GGGAC 2 cut(s) 1661, 2066
FauI CCCGC 4 cut(s) 43, 167, 551, 1637
FbaI TGATCA 1 cut(s) 693
Fnu4HI GCNGC 3 cut(s) 207, 1824, 1883
FokI GGATG 3 cut(s) 1154, 1719, 1739
FriOI GRGCYC 1 cut(s) 1243
Fsp4HI GCNGC 3 cut(s) 207, 1824, 1883
FspBI CTAG 3 cut(s) 414, 1218, 1859
GlaI GCGC 3 cut(s) 895, 939, 1643
GluI GCNGC 3 cut(s) 207, 1824, 1883
GsaI CCCAGC 2 cut(s) 179, 1440
HaeII RGCGCY 1 cut(s) 941
HaeIII GGCC 2 cut(s) 602, 1919
HapII CCGG 1 cut(s) 603
HgaI GACGC 1 cut(s) 1658
HhaI GCGC 3 cut(s) 896, 940, 1644
Hin6I GCGC 3 cut(s) 894, 938, 1642
HinP1I GCGC 3 cut(s) 894, 938, 1642
HincII GTYRAC 1 cut(s) 1339
HindII GTYRAC 1 cut(s) 1339
HindIII AAGCTT 3 cut(s) 405, 1082, 1887
HinfI GANTC 8 cut(s) 200, 214, 272, 505, 662, 1145, 1212, 1717
HpaII CCGG 1 cut(s) 603
HphI GGTGA 6 cut(s) 175, 298, 539, 764, 1610, 1892
Hpy166II GTNNAC 6 cut(s) 139, 384, 496, 1180, 1339, 1786
Hpy188I TCNGA 6 cut(s) 299, 667, 1100, 1577, 1777, 1940
Hpy188III TCNNGA 8 cut(s) 260, 400, 414, 460, 953, 1244, 1468, 1799
Hpy8I GTNNAC 6 cut(s) 139, 384, 496, 1180, 1339, 1786
Hpy99I CGWCG 1 cut(s) 380
HpyAV CCTTC 7 cut(s) 26, 319, 428, 772, 1182, 1687, 2075
HpyCH4III ACNGT 3 cut(s) 61, 1090, 1409
HpyCH4IV ACGT 4 cut(s) 510, 609, 1182, 1945
HpyF10VI GCNNNNNNNGC 2 cut(s) 50, 893
HpyF3I CTNAG 3 cut(s) 567, 1655, 1776
HpySE526I ACGT 4 cut(s) 510, 609, 1182, 1945
HspAI GCGC 3 cut(s) 894, 938, 1642
Ksp22I TGATCA 1 cut(s) 693
Kzo9I GATC 5 cut(s) 693, 943, 976, 1050, 1815
LmnI GCTCC 4 cut(s) 640, 891, 1028, 1705
Lsp1109I GCAGC 2 cut(s) 1835, 1894
LweI GCATC 5 cut(s) 98, 917, 1251, 1637, 1852
MaeI CTAG 3 cut(s) 414, 1218, 1859
MaeII ACGT 4 cut(s) 510, 609, 1182, 1945
MaeIII GTNAC 9 cut(s) 605, 685, 782, 796, 988, 1090, 1220, 1291, 1598
MalI GATC 5 cut(s) 695, 945, 978, 1052, 1817
MboI GATC 5 cut(s) 693, 943, 976, 1050, 1815
MflI RGATCY 1 cut(s) 976
MhlI GDGCHC 4 cut(s) 427, 1243, 1404, 1839
MlsI TGGCCA 1 cut(s) 1919
MluCI AATT 8 cut(s) 71, 589, 727, 1203, 1256, 1383, 1545, 2040
MluNI TGGCCA 1 cut(s) 1919
MlyI GAGTC 2 cut(s) 671, 1206
MmeI TCCRAC 5 cut(s) 394, 639, 645, 1507, 1641
Mox20I TGGCCA 1 cut(s) 1919
Mph1103I ATGCAT 1 cut(s) 1630
MroXI GAANNNNTTC 2 cut(s) 1171, 2063
MscI TGGCCA 1 cut(s) 1919
MseI TTAA 3 cut(s) 8, 1161, 2031
MslI CAYNNNNRTG 3 cut(s) 513, 1596, 1905
Msp20I TGGCCA 1 cut(s) 1919
MspA1I CMGCKG 1 cut(s) 1826
MspI CCGG 1 cut(s) 603
MspR9I CCNGG 4 cut(s) 548, 1192, 1704, 1950
Mva1269I GAATGC 1 cut(s) 1173
MvaI CCWGG 4 cut(s) 548, 1192, 1704, 1950
MvnI CGCG 3 cut(s) 209, 896, 1644
MwoI GCNNNNNNNGC 2 cut(s) 50, 893
NcoI CCATGG 1 cut(s) 228
NdeII GATC 5 cut(s) 693, 943, 976, 1050, 1815
NlaIV GGNNCC 2 cut(s) 1701, 2060
NmuCI GTSAC 2 cut(s) 1291, 1598
NsiI ATGCAT 1 cut(s) 1630
NspI RCATGY 2 cut(s) 961, 1477
NspV TTCGAA 1 cut(s) 1963
OliI CACNNNNGTG 1 cut(s) 1905
PagI TCATGA 1 cut(s) 1798
PcsI WCGNNNNNNNCGW 2 cut(s) 258, 267
PctI GAATGC 1 cut(s) 1173
PdmI GAANNNNTTC 2 cut(s) 1171, 2063
PfeI GAWTC 6 cut(s) 200, 214, 272, 505, 1145, 1717
PfoI TCCNGGA 3 cut(s) 1190, 1702, 1948
PkrI GCNGC 3 cut(s) 208, 1825, 1884
PleI GAGTC 2 cut(s) 670, 1206
PmaCI CACGTG 1 cut(s) 511
PmlI CACGTG 1 cut(s) 511
PpsI GAGTC 2 cut(s) 670, 1206
Ppu21I YACGTR 2 cut(s) 511, 610
PshAI GACNNNNGTC 1 cut(s) 1344
PsiI TTATAA 1 cut(s) 285
Psp6I CCWGG 4 cut(s) 546, 1190, 1702, 1948
PspCI CACGTG 1 cut(s) 511
PspFI CCCAGC 2 cut(s) 175, 1436
PspGI CCWGG 4 cut(s) 546, 1190, 1702, 1948
PspN4I GGNNCC 2 cut(s) 1701, 2060
PsuI RGATCY 1 cut(s) 976
PvuII CAGCTG 1 cut(s) 1826
RsaI GTAC 3 cut(s) 1010, 1250, 1990
RsaNI GTAC 3 cut(s) 1009, 1249, 1989
RseI CAYNNNNRTG 3 cut(s) 513, 1596, 1905
SaqAI TTAA 3 cut(s) 8, 1161, 2031
SatI GCNGC 3 cut(s) 207, 1824, 1883
Sau3AI GATC 5 cut(s) 693, 943, 976, 1050, 1815
ScaI AGTACT 1 cut(s) 1250
SchI GAGTC 2 cut(s) 671, 1206
ScrFI CCNGG 4 cut(s) 548, 1192, 1704, 1950
SduI GDGCHC 4 cut(s) 427, 1243, 1404, 1839
SfaNI GCATC 5 cut(s) 98, 917, 1251, 1637, 1852
SfuI TTCGAA 1 cut(s) 1963
SmiMI CAYNNNNRTG 3 cut(s) 513, 1596, 1905
SmlI CTYRAG 2 cut(s) 533, 1244
SmoI CTYRAG 2 cut(s) 533, 1244
Sse9I AATT 8 cut(s) 71, 589, 727, 1203, 1256, 1383, 1545, 2040
SspI AATATT 2 cut(s) 855, 1968
SspMI CTAG 3 cut(s) 414, 1218, 1859
StyD4I CCNGG 4 cut(s) 546, 1190, 1702, 1948
StyI CCWWGG 3 cut(s) 228, 276, 1391
TaaI ACNGT 3 cut(s) 61, 1090, 1409
TaiI ACGT 4 cut(s) 513, 612, 1185, 1948
TasI AATT 8 cut(s) 71, 589, 727, 1203, 1256, 1383, 1545, 2040
TatI WGTACW 2 cut(s) 1008, 1248
TauI GCSGC 1 cut(s) 209
TfiI GAWTC 6 cut(s) 200, 214, 272, 505, 1145, 1717
Tru1I TTAA 3 cut(s) 8, 1161, 2031
Tru9I TTAA 3 cut(s) 8, 1161, 2031
TscAI CASTG 2 cut(s) 432, 703
TseFI GTSAC 2 cut(s) 1291, 1598
TseI GCWGC 2 cut(s) 1823, 1882
Tsp45I GTSAC 2 cut(s) 1291, 1598
TspDTI ATGAA 7 cut(s) 437, 1094, 1382, 1453, 1509, 1688, 1823
TspGWI ACGGA 2 cut(s) 1239, 2006
TspRI CASTG 2 cut(s) 432, 703
XapI RAATTY 2 cut(s) 589, 727
XbaI TCTAGA 1 cut(s) 413
XceI RCATGY 2 cut(s) 961, 1477
XcmI CCANNNNNNNNNTGG 1 cut(s) 554
XmnI GAANNNNTTC 2 cut(s) 1171, 2063
XspI CTAG 3 cut(s) 414, 1218, 1859
ZrmI AGTACT 1 cut(s) 1250
Zsp2I ATGCAT 1 cut(s) 1630
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.