RLG00000004351

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0018438
Physical Location & Seq
Reverse (-)
58634532 .. 58636643
2112 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004351

Sequence Viewer

Length: 2112 bp
ATGGTTTTAACAACCCTTCCTATCTCCATCTCTCCCGCCAAAGCTCTAACCGCCATAACTGTAATACCCCAATTCCCACAAAACCCTAAAACCCTAATCCTTCACCGATGCAAAACCACCAGAGACCTCAACCAAGTCCACGCCCATCTCATCAAAACCCGCCTCCTCCTCAACCCCGCCATCACCGAAAACCTCCTCGAATCCGCCGCATTGATTCTCCCCAATGCCATGGACTATGCTCTCTCCATTTTCGACAATCTCGAACAACCCGATTCCTTGGCTTATAACATCATCATCAGAAGCCTCACATTCAAGCAATCCCCGCTTAATGCCATTGTTCTGTTCAACAAAATGGTCGAAAACTCTGTCCAACCCGACGAGTTCACTTTTTCGAGTGTGCTGAAAGCTTGTTCTAGAGTAAGGGCATTGGGGGAAGGAGAGCAGGTTCATGCCCACATCGTGAAATGTGGTTTCAAGTCAAATGGGTTCGTTGTGAACACTTTGCTTCACATGTATGCGACTTGTGGTGAGCTTGAGGTTGCCCGCCAGGTGTTCGATGGATTGCCTGAGAGAAATGTTATGGCTTGGAATTCGATGTTGGCCGGTTACGTGAAGAATGGGTGGTGGGGCGAGGTTGTGGAGCTGTTTCGTAAAATGTTGGATTCGGATATTGGGTTTGATGAGGTTACATTGATCAGTGTTTTGACAGCGTGTGGGAGAGTGGCGAATTTGGAACTGGGAGAGTGGGTTGGTGAGTATATAGAGGCAAATGGACTGAAGGGTAACATTGCTTTGGTTACTTCTCTGGTAGATATGTATGCAAAATGTGGTCAAGTGGATAAAGCAAGACGAATATTTGATGGAATGGACAGGAGAGATGTTGTTGCGTGGAGCGCGATGATTTCTGGTTATGGTCAAGCAAATAGATGCAGGGAGGCGCTTGATCTGTTTCACGACATGCAAAAGGCAAATGTGGATCCTAATGAGGTTACAATGGTTAGTGTGCTGTACTCCTGTGGTGTTCTTGGAGCTTTGGATACTGGTAAATGGGTCGACTTTTATGTAATGAAGAAGAAAATGAAGCTTACTGTTACCCTCGGAACTGCATTGATAGATTTCTATGCAAAATGTGGTTGTGTGGATGATTCAGTTGAAGTGTTTAATAGGATGTCTTCGGTAAACGTCTTCTCGTGGACAGCACTAATTCAAGGACTCGCTAGTAACGGACAGGGGAAAAGGGCTCTTGAGTACTTCAAATTGATGCAGGAGAAGAACATCAAACCAAATGATGTGACTTTTATTGCGGTTCTTTCTGCTTGTAGTCATGCAGGTTTGGTTGACGAGGGTCGAAATCTTTTTGTCAGCATGAACAAGGATTTTGGAATTGAACCAAGGATTGAGCACTACGGTTCTATGGTTGATATCTTGGGTCGAGCTGGGTTGATTGAAGAGGCATATAAGTTCATCAGGAACATGCCTATCCAACCCAATGCTGTTGTTTGGAGGACATTATTGGCTTCATGCAGAGCAAAGAAAAATGTTGAAATTGGCGAAGAGGCACTGCAACAGATAATCAGATTGGAGACCCCTCATAGCGGTGACTACATACTTCTGTCCAACATTTATGCATCTGCTGGTAGGCGCGAGGACGCTCTTAGAGTGAGAAATCAAATGAAAGAGGAGAGAATAGAGAAGGTGGCTCCTGGATGTAGCGTGATTCAGTTGGATGGAACGATTTATGAGTTCTTTGCAGAGAACAAGGTATATCCACACTCCGAGGAGGTTTACAACGCTACTCATGACATGATGAAACAGATCGAGGCAGCTGGTTATGTGCCCAACACAGCAGATGGCCGACTAGATGCAGAAGAAGATGATATGCAGCAAGCTTCAGTTTCTCACCACAGTGAGAAGTTGGCCATTGCATTTGGTCTTATCAGAACACGTCCTGGAACGACACTTAGAATATCGAAAAATCTTCGAGTTTGTACGGACTGCCACAATGCAACGAAGATAATGTCAAAGGTTTTTAACAGAGAAATTATTGTTAGGGACTGGAACCGCTTCCATCATTTCAAAGAAGGGTCATGTTCCTGCAATGACTATTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

704

Amino Acids

78.79

Weight (kDa)

6.31

Isoelectric Point (pI)

40.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 90 - 138 1.7e-10 PPR repeat family
PPR_2 PF13041 191 - 239 3.6e-07 PPR repeat family
PPR PF01535 195 - 223 3.2e-07 PPR repeat
PPR_2 PF13041 292 - 337 1e-11 PPR repeat family
PPR PF01535 295 - 324 8.6e-08 PPR repeat
PPR_3 PF13812 393 - 440 7.5e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 394 - 441 2.9e-11 PPR repeat family
PPR PF01535 396 - 426 1.5e-06 PPR repeat
E_motif PF20431 513 - 574 2.7e-18 E motif
DYW_deaminase PF14432 610 - 703 1.4e-36 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0018438)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g06290
malus_domestica MD14G1171500.v1.1
prunus_persica Prupe.5G165600_v2.0.a1
pyrus_communis pycom14g14320
rosa_chinensis RchiOBHm_Chr7g0192571
rosa_laevigata RLG00000004351
rosa_multiflora Rmu_sc0003108.1_g000042
rosa_rugosa Rorug07G0002200
rosa_samantha Rh7BG129100
rosa_wichuraiana Rw7G010890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 285
Acc36I ACCTGC 2 cut(s) 433, 1319
AccI GTMKAC 1 cut(s) 1053
AccII CGCG 2 cut(s) 896, 1644
AclWI GGATC 2 cut(s) 971, 984
AcoI YGGCCR 3 cut(s) 600, 1852, 1917
AcsI RAATTY 2 cut(s) 589, 727
AcuI CTGAAG 2 cut(s) 797, 1875
AdeI CACNNNGTG 1 cut(s) 460
AfaI GTAC 3 cut(s) 1010, 1250, 1990
AfiI CCNNNNNNNGG 1 cut(s) 1595
AflIII ACRYGT 2 cut(s) 510, 1943
AjiI CACGTC 1 cut(s) 1946
AjnI CCWGG 3 cut(s) 546, 1702, 1948
AjuI GAANNNNNNNTTGG 2 cut(s) 581, 613
AleI CACNNNNGTG 1 cut(s) 1905
AloI GAACNNNNNNTCC 2 cut(s) 429, 461
AluBI AGCT 9 cut(s) 44, 407, 532, 643, 1031, 1084, 1436, 1826, 1889
AluI AGCT 9 cut(s) 44, 407, 532, 643, 1031, 1084, 1436, 1826, 1889
Alw21I GWGCWC 1 cut(s) 1404
Alw26I GTCTC 2 cut(s) 117, 1577
AlwI GGATC 2 cut(s) 971, 984
AoxI GGCC 3 cut(s) 600, 1852, 1917
ApeKI GCWGC 2 cut(s) 1823, 1882
ApoI RAATTY 2 cut(s) 589, 727
ArsI GACNNNNNNTTYG 4 cut(s) 351, 383, 2003, 2035
Asp700I GAANNNNTTC 1 cut(s) 2063
AspLEI GCGC 3 cut(s) 896, 940, 1644
AsuHPI GGTGA 6 cut(s) 95, 175, 539, 764, 1610, 1892
BaeGI GKGCMC 1 cut(s) 1839
BalI TGGCCA 1 cut(s) 1919
BamHI GGATCC 1 cut(s) 976
BanII GRGCYC 1 cut(s) 1243
BauI CACGAG 1 cut(s) 1189
BbsI GAAGAC 2 cut(s) 1164, 1177
Bbv12I GWGCWC 1 cut(s) 1404
BbvI GCAGC 2 cut(s) 1835, 1894
BccI CCATC 8 cut(s) 35, 153, 188, 551, 854, 1721, 1844, 2076
BciT130I CCWGG 3 cut(s) 548, 1704, 1950
BciVI GTATCC 1 cut(s) 1030
BclI TGATCA 1 cut(s) 693
BcoDI GTCTC 2 cut(s) 117, 1577
BfaI CTAG 3 cut(s) 414, 1218, 1859
BfoI RGCGCY 1 cut(s) 941
BfuAI ACCTGC 2 cut(s) 433, 1319
BfuI GTATCC 1 cut(s) 1030
BisI GCNGC 3 cut(s) 207, 1824, 1883
BlsI GCNGC 3 cut(s) 208, 1825, 1884
BmcAI AGTACT 1 cut(s) 1250
Bme1390I CCNGG 3 cut(s) 548, 1704, 1950
BmgBI CACGTC 1 cut(s) 1946
BmiI GGNNCC 3 cut(s) 978, 1701, 2060
BmrFI CCNGG 3 cut(s) 548, 1704, 1950
BmrI ACTGGG 1 cut(s) 746
BmsI GCATC 5 cut(s) 98, 917, 1251, 1637, 1852
BmuI ACTGGG 1 cut(s) 746
BoxI GACNNNNGTC 1 cut(s) 1344
BpiI GAAGAC 2 cut(s) 1164, 1177
BpuEI CTTGAG 2 cut(s) 554, 1265
BsaAI YACGTR 1 cut(s) 610
BsaI GGTCTC 2 cut(s) 117, 1577
BsaJI CCNNGG 5 cut(s) 228, 276, 1096, 1391, 1776
BsaXI ACNNNNNCTCC 4 cut(s) 429, 459, 732, 762
Bsc4I CCNNNNNNNGG 1 cut(s) 1595
Bse118I RCCGGY 1 cut(s) 602
Bse1I ACTGG 3 cut(s) 741, 1045, 2060
Bse3DI GCAATG 3 cut(s) 786, 1920, 2104
BseBI CCWGG 3 cut(s) 548, 1704, 1950
BseDI CCNNGG 5 cut(s) 228, 276, 1096, 1391, 1776
BseGI GGATG 4 cut(s) 1147, 1173, 1712, 1732
BseLI CCNNNNNNNGG 1 cut(s) 1595
BseMI GCAATG 3 cut(s) 786, 1920, 2104
BseMII CTCAG 1 cut(s) 558
BseNI ACTGG 3 cut(s) 741, 1045, 2060
BseRI GAGGAG 5 cut(s) 155, 158, 185, 1694, 1793
BseSI GKGCMC 1 cut(s) 1839
BseXI GCAGC 2 cut(s) 1835, 1894
BseYI CCCAGC 1 cut(s) 1436
Bsh1236I CGCG 2 cut(s) 896, 1644
BshFI GGCC 3 cut(s) 602, 1854, 1919
BsiHKAI GWGCWC 1 cut(s) 1404
BsiSI CCGG 1 cut(s) 603
BslFI GGGAC 1 cut(s) 2066
BslI CCNNNNNNNGG 1 cut(s) 1595
BsmAI GTCTC 2 cut(s) 117, 1577
BsmFI GGGAC 1 cut(s) 2066
BsnI GGCC 3 cut(s) 602, 1854, 1919
Bso31I GGTCTC 2 cut(s) 117, 1577
Bsp1286I GDGCHC 3 cut(s) 1243, 1404, 1839
Bsp143I GATC 4 cut(s) 693, 943, 976, 1815
Bsp19I CCATGG 1 cut(s) 228
BspANI GGCC 3 cut(s) 602, 1854, 1919
BspCNI CTCAG 1 cut(s) 559
BspFNI CGCG 2 cut(s) 896, 1644
BspHI TCATGA 1 cut(s) 1798
BspLI GGNNCC 3 cut(s) 978, 1701, 2060
BspMI ACCTGC 2 cut(s) 433, 1319
BspPI GGATC 2 cut(s) 971, 984
BspTNI GGTCTC 2 cut(s) 117, 1577
BsrDI GCAATG 3 cut(s) 786, 1920, 2104
BsrFI RCCGGY 1 cut(s) 602
BsrI ACTGG 3 cut(s) 741, 1045, 2060
BssAI RCCGGY 1 cut(s) 602
BssECI CCNNGG 5 cut(s) 228, 276, 1096, 1391, 1776
BssMI GATC 4 cut(s) 693, 943, 976, 1815
BssSI CACGAG 1 cut(s) 1189
BssT1I CCWWGG 3 cut(s) 228, 276, 1391
Bst2BI CACGAG 1 cut(s) 1189
Bst2UI CCWGG 3 cut(s) 548, 1704, 1950
Bst4CI ACNGT 4 cut(s) 61, 1090, 1409, 1907
Bst6I CTCTTC 2 cut(s) 1443, 1548
BstBAI YACGTR 1 cut(s) 610
BstC8I GCNNGC 2 cut(s) 544, 1887
BstDEI CTNAG 3 cut(s) 567, 1655, 1961
BstDSI CCRYGG 1 cut(s) 228
BstF5I GGATG 4 cut(s) 1147, 1173, 1712, 1732
BstFNI CGCG 2 cut(s) 896, 1644
BstH2I RGCGCY 1 cut(s) 941
BstHHI GCGC 3 cut(s) 896, 940, 1644
BstKTI GATC 4 cut(s) 696, 946, 979, 1818
BstMAI GTCTC 2 cut(s) 117, 1577
BstMBI GATC 4 cut(s) 693, 943, 976, 1815
BstMWI GCNNNNNNNGC 3 cut(s) 50, 322, 893
BstNI CCWGG 3 cut(s) 548, 1704, 1950
BstNSI RCATGY 3 cut(s) 514, 961, 1477
BstPAI GACNNNNGTC 1 cut(s) 1344
BstSCI CCNGG 3 cut(s) 546, 1702, 1948
BstSLI GKGCMC 1 cut(s) 1839
BstUI CGCG 2 cut(s) 896, 1644
BstV1I GCAGC 2 cut(s) 1835, 1894
BstV2I GAAGAC 2 cut(s) 1164, 1177
BstX2I RGATCY 1 cut(s) 976
BstXI CCANNNNNNTGG 1 cut(s) 229
BstYI RGATCY 1 cut(s) 976
BsuI GTATCC 1 cut(s) 1030
BsuRI GGCC 3 cut(s) 602, 1854, 1919
BtgI CCRYGG 1 cut(s) 228
BtgZI GCGATG 1 cut(s) 911
BtrI CACGTC 1 cut(s) 1946
BtsCI GGATG 4 cut(s) 1147, 1173, 1712, 1732
BtsI GCAGTG 1 cut(s) 1559
BtsIMutI CAGTG 3 cut(s) 703, 1559, 1912
BveI ACCTGC 2 cut(s) 433, 1319
Cac8I GCNNGC 2 cut(s) 544, 1887
CciI TCATGA 1 cut(s) 1798
CfoI GCGC 3 cut(s) 896, 940, 1644
Cfr10I RCCGGY 1 cut(s) 602
CseI GACGC 1 cut(s) 1658
Csp6I GTAC 3 cut(s) 1009, 1249, 1989
CviQI GTAC 3 cut(s) 1009, 1249, 1989
DdeI CTNAG 3 cut(s) 567, 1655, 1961
DpnI GATC 4 cut(s) 695, 945, 978, 1817
DpnII GATC 4 cut(s) 693, 943, 976, 1815
DraIII CACNNNGTG 1 cut(s) 460
EaeI YGGCCR 3 cut(s) 600, 1852, 1917
Eam1104I CTCTTC 2 cut(s) 1443, 1548
EarI CTCTTC 2 cut(s) 1443, 1548
EciI GGCGGA 1 cut(s) 193
Eco130I CCWWGG 3 cut(s) 228, 276, 1391
Eco24I GRGCYC 1 cut(s) 1243
Eco31I GGTCTC 2 cut(s) 117, 1577
Eco32I GATATC 1 cut(s) 1423
Eco57I CTGAAG 2 cut(s) 797, 1875
EcoRI GAATTC 1 cut(s) 589
EcoRII CCWGG 3 cut(s) 546, 1702, 1948
EcoRV GATATC 1 cut(s) 1423
EcoT14I CCWWGG 3 cut(s) 228, 276, 1391
EcoT22I ATGCAT 1 cut(s) 1630
EcoT38I GRGCYC 1 cut(s) 1243
ErhI CCWWGG 3 cut(s) 228, 276, 1391
FaqI GGGAC 1 cut(s) 2066
FauI CCCGC 5 cut(s) 43, 167, 184, 330, 551
FbaI TGATCA 1 cut(s) 693
FblI GTMKAC 1 cut(s) 1053
Fnu4HI GCNGC 3 cut(s) 207, 1824, 1883
FokI GGATG 4 cut(s) 1154, 1180, 1719, 1739
FriOI GRGCYC 1 cut(s) 1243
Fsp4HI GCNGC 3 cut(s) 207, 1824, 1883
FspBI CTAG 3 cut(s) 414, 1218, 1859
GlaI GCGC 3 cut(s) 895, 939, 1643
GluI GCNGC 3 cut(s) 207, 1824, 1883
GsaI CCCAGC 1 cut(s) 1440
HaeII RGCGCY 1 cut(s) 941
HaeIII GGCC 3 cut(s) 602, 1854, 1919
HapII CCGG 1 cut(s) 603
HgaI GACGC 1 cut(s) 1658
HhaI GCGC 3 cut(s) 896, 940, 1644
Hin6I GCGC 3 cut(s) 894, 938, 1642
HinP1I GCGC 3 cut(s) 894, 938, 1642
HincII GTYRAC 2 cut(s) 1054, 1339
HindII GTYRAC 2 cut(s) 1054, 1339
HindIII AAGCTT 3 cut(s) 405, 1082, 1887
HinfI GANTC 7 cut(s) 200, 214, 272, 662, 1145, 1212, 1717
HpaII CCGG 1 cut(s) 603
HphI GGTGA 6 cut(s) 95, 175, 539, 764, 1610, 1892
Hpy166II GTNNAC 8 cut(s) 139, 384, 496, 1054, 1180, 1194, 1339, 1786
Hpy188I TCNGA 6 cut(s) 299, 667, 1100, 1577, 1777, 1940
Hpy188III TCNNGA 7 cut(s) 260, 414, 460, 953, 1244, 1468, 1799
Hpy8I GTNNAC 8 cut(s) 139, 384, 496, 1054, 1180, 1194, 1339, 1786
Hpy99I CGWCG 1 cut(s) 380
HpyAV CCTTC 6 cut(s) 26, 110, 428, 772, 1687, 2075
HpyCH4III ACNGT 4 cut(s) 61, 1090, 1409, 1907
HpyCH4IV ACGT 3 cut(s) 609, 1182, 1945
HpyF10VI GCNNNNNNNGC 3 cut(s) 50, 322, 893
HpyF3I CTNAG 3 cut(s) 567, 1655, 1961
HpySE526I ACGT 3 cut(s) 609, 1182, 1945
HspAI GCGC 3 cut(s) 894, 938, 1642
Ksp22I TGATCA 1 cut(s) 693
Kzo9I GATC 4 cut(s) 693, 943, 976, 1815
LmnI GCTCC 4 cut(s) 640, 891, 1028, 1705
Lsp1109I GCAGC 2 cut(s) 1835, 1894
LweI GCATC 5 cut(s) 98, 917, 1251, 1637, 1852
MaeI CTAG 3 cut(s) 414, 1218, 1859
MaeII ACGT 3 cut(s) 609, 1182, 1945
MaeIII GTNAC 9 cut(s) 605, 685, 782, 796, 988, 1090, 1220, 1291, 1598
MalI GATC 4 cut(s) 695, 945, 978, 1817
MboI GATC 4 cut(s) 693, 943, 976, 1815
MflI RGATCY 1 cut(s) 976
MhlI GDGCHC 3 cut(s) 1243, 1404, 1839
MlsI TGGCCA 1 cut(s) 1919
MluCI AATT 8 cut(s) 71, 589, 727, 1203, 1256, 1383, 1545, 2040
MluNI TGGCCA 1 cut(s) 1919
MlyI GAGTC 1 cut(s) 1206
MmeI TCCRAC 5 cut(s) 394, 639, 1507, 1641, 1704
Mox20I TGGCCA 1 cut(s) 1919
Mph1103I ATGCAT 1 cut(s) 1630
MroXI GAANNNNTTC 1 cut(s) 2063
MscI TGGCCA 1 cut(s) 1919
MseI TTAA 4 cut(s) 8, 327, 1161, 2031
MslI CAYNNNNRTG 3 cut(s) 513, 1596, 1905
Msp20I TGGCCA 1 cut(s) 1919
MspA1I CMGCKG 1 cut(s) 1826
MspI CCGG 1 cut(s) 603
MspR9I CCNGG 3 cut(s) 548, 1704, 1950
MvaI CCWGG 3 cut(s) 548, 1704, 1950
MvnI CGCG 2 cut(s) 896, 1644
MwoI GCNNNNNNNGC 3 cut(s) 50, 322, 893
NcoI CCATGG 1 cut(s) 228
NdeII GATC 4 cut(s) 693, 943, 976, 1815
NlaIV GGNNCC 3 cut(s) 978, 1701, 2060
NmuCI GTSAC 2 cut(s) 1291, 1598
NsiI ATGCAT 1 cut(s) 1630
NspI RCATGY 3 cut(s) 514, 961, 1477
OliI CACNNNNGTG 1 cut(s) 1905
PagI TCATGA 1 cut(s) 1798
PciI ACATGT 1 cut(s) 510
PcsI WCGNNNNNNNCGW 2 cut(s) 258, 267
PdmI GAANNNNTTC 1 cut(s) 2063
PfeI GAWTC 6 cut(s) 200, 214, 272, 662, 1145, 1717
PfoI TCCNGGA 2 cut(s) 1702, 1948
PkrI GCNGC 3 cut(s) 208, 1825, 1884
PleI GAGTC 1 cut(s) 1206
PpsI GAGTC 1 cut(s) 1206
Ppu21I YACGTR 1 cut(s) 610
PscI ACATGT 1 cut(s) 510
PshAI GACNNNNGTC 1 cut(s) 1344
PsiI TTATAA 1 cut(s) 285
Psp6I CCWGG 3 cut(s) 546, 1702, 1948
PspFI CCCAGC 1 cut(s) 1436
PspGI CCWGG 3 cut(s) 546, 1702, 1948
PspN4I GGNNCC 3 cut(s) 978, 1701, 2060
PsuI RGATCY 1 cut(s) 976
PvuII CAGCTG 1 cut(s) 1826
RsaI GTAC 3 cut(s) 1010, 1250, 1990
RsaNI GTAC 3 cut(s) 1009, 1249, 1989
RseI CAYNNNNRTG 3 cut(s) 513, 1596, 1905
SalI GTCGAC 1 cut(s) 1052
SaqAI TTAA 4 cut(s) 8, 327, 1161, 2031
SatI GCNGC 3 cut(s) 207, 1824, 1883
Sau3AI GATC 4 cut(s) 693, 943, 976, 1815
ScaI AGTACT 1 cut(s) 1250
SchI GAGTC 1 cut(s) 1206
ScrFI CCNGG 3 cut(s) 548, 1704, 1950
SduI GDGCHC 3 cut(s) 1243, 1404, 1839
SfaNI GCATC 5 cut(s) 98, 917, 1251, 1637, 1852
SmiMI CAYNNNNRTG 3 cut(s) 513, 1596, 1905
SmlI CTYRAG 2 cut(s) 533, 1244
SmoI CTYRAG 2 cut(s) 533, 1244
Sse9I AATT 8 cut(s) 71, 589, 727, 1203, 1256, 1383, 1545, 2040
SspI AATATT 1 cut(s) 855
SspMI CTAG 3 cut(s) 414, 1218, 1859
StyD4I CCNGG 3 cut(s) 546, 1702, 1948
StyI CCWWGG 3 cut(s) 228, 276, 1391
TaaI ACNGT 4 cut(s) 61, 1090, 1409, 1907
TaiI ACGT 3 cut(s) 612, 1185, 1948
TasI AATT 8 cut(s) 71, 589, 727, 1203, 1256, 1383, 1545, 2040
TatI WGTACW 2 cut(s) 1008, 1248
TauI GCSGC 1 cut(s) 209
TfiI GAWTC 6 cut(s) 200, 214, 272, 662, 1145, 1717
Tru1I TTAA 4 cut(s) 8, 327, 1161, 2031
Tru9I TTAA 4 cut(s) 8, 327, 1161, 2031
TscAI CASTG 3 cut(s) 703, 1566, 1912
TseFI GTSAC 2 cut(s) 1291, 1598
TseI GCWGC 2 cut(s) 1823, 1882
Tsp45I GTSAC 2 cut(s) 1291, 1598
TspDTI ATGAA 8 cut(s) 437, 1082, 1094, 1382, 1453, 1509, 1688, 1823
TspGWI ACGGA 2 cut(s) 1239, 2006
TspRI CASTG 3 cut(s) 703, 1566, 1912
XapI RAATTY 2 cut(s) 589, 727
XbaI TCTAGA 1 cut(s) 413
XceI RCATGY 3 cut(s) 514, 961, 1477
XcmI CCANNNNNNNNNTGG 1 cut(s) 554
XmiI GTMKAC 1 cut(s) 1053
XmnI GAANNNNTTC 1 cut(s) 2063
XspI CTAG 3 cut(s) 414, 1218, 1859
ZrmI AGTACT 1 cut(s) 1250
Zsp2I ATGCAT 1 cut(s) 1630
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.