No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom06g02010 |
| rosa_chinensis | RchiOBHm_Chr7g0212371 |
| rosa_laevigata | RLG00000002895 |
| rosa_roxburghii | Rroxscaffold_3G00246890 |
| rosa_rugosa | Rorug07G0133400 |
| rosa_samantha | Rh2BG243700 Rh5DG381900 Rh7AG266200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 107 |
| AclWI | GGATC | 1 cut(s) | 70 |
| AfaI | GTAC | 1 cut(s) | 233 |
| AgsI | TTSAA | 1 cut(s) | 254 |
| AluBI | AGCT | 2 cut(s) | 244, 257 |
| AluI | AGCT | 2 cut(s) | 244, 257 |
| AlwI | GGATC | 1 cut(s) | 70 |
| AoxI | GGCC | 1 cut(s) | 6 |
| AspS9I | GGNCC | 1 cut(s) | 6 |
| AsuC2I | CCSGG | 1 cut(s) | 214 |
| BbsI | GAAGAC | 1 cut(s) | 185 |
| BbvCI | CCTCAGC | 1 cut(s) | 10 |
| BcnI | CCSGG | 1 cut(s) | 214 |
| BfaI | CTAG | 1 cut(s) | 274 |
| BfmI | CTRYAG | 1 cut(s) | 114 |
| BfuAI | ACCTGC | 1 cut(s) | 107 |
| Bme1390I | CCNGG | 1 cut(s) | 214 |
| BmgT120I | GGNCC | 1 cut(s) | 6 |
| BmrFI | CCNGG | 1 cut(s) | 214 |
| BmsI | GCATC | 1 cut(s) | 65 |
| BpiI | GAAGAC | 1 cut(s) | 185 |
| Bpu10I | CCTNAGC | 1 cut(s) | 10 |
| BpuEI | CTTGAG | 1 cut(s) | 243 |
| BpuMI | CCSGG | 1 cut(s) | 214 |
| BsaJI | CCNNGG | 2 cut(s) | 99, 212 |
| BseDI | CCNNGG | 2 cut(s) | 99, 212 |
| BseGI | GGATG | 2 cut(s) | 56, 192 |
| BseMII | CTCAG | 1 cut(s) | 24 |
| BseRI | GAGGAG | 2 cut(s) | 52, 55 |
| BshFI | GGCC | 1 cut(s) | 8 |
| BsiSI | CCGG | 1 cut(s) | 214 |
| BslFI | GGGAC | 2 cut(s) | 151, 195 |
| BsmFI | GGGAC | 2 cut(s) | 151, 195 |
| BsnI | GGCC | 1 cut(s) | 8 |
| Bsp143I | GATC | 2 cut(s) | 39, 75 |
| Bsp19I | CCATGG | 1 cut(s) | 99 |
| BspANI | GGCC | 1 cut(s) | 8 |
| BspCNI | CTCAG | 1 cut(s) | 23 |
| BspMAI | CTGCAG | 1 cut(s) | 118 |
| BspMI | ACCTGC | 1 cut(s) | 107 |
| BspPI | GGATC | 1 cut(s) | 70 |
| BssECI | CCNNGG | 2 cut(s) | 99, 212 |
| BssMI | GATC | 2 cut(s) | 39, 75 |
| BssT1I | CCWWGG | 1 cut(s) | 99 |
| BstDEI | CTNAG | 1 cut(s) | 10 |
| BstDSI | CCRYGG | 1 cut(s) | 99 |
| BstF5I | GGATG | 2 cut(s) | 56, 192 |
| BstKTI | GATC | 2 cut(s) | 42, 78 |
| BstMBI | GATC | 2 cut(s) | 39, 75 |
| BstSCI | CCNGG | 1 cut(s) | 212 |
| BstSFI | CTRYAG | 1 cut(s) | 114 |
| BstV2I | GAAGAC | 1 cut(s) | 185 |
| BsuRI | GGCC | 1 cut(s) | 8 |
| BtgI | CCRYGG | 1 cut(s) | 99 |
| BtsCI | GGATG | 2 cut(s) | 56, 192 |
| BveI | ACCTGC | 1 cut(s) | 107 |
| Cfr13I | GGNCC | 1 cut(s) | 6 |
| Csp6I | GTAC | 1 cut(s) | 232 |
| CviAII | CATG | 5 cut(s) | 100, 155, 165, 183, 194 |
| CviJI | RGCY | 5 cut(s) | 8, 14, 98, 244, 257 |
| CviKI_1 | RGCY | 5 cut(s) | 8, 14, 98, 244, 257 |
| CviQI | GTAC | 1 cut(s) | 232 |
| DdeI | CTNAG | 1 cut(s) | 10 |
| DpnI | GATC | 2 cut(s) | 41, 77 |
| DpnII | GATC | 2 cut(s) | 39, 75 |
| Eco130I | CCWWGG | 1 cut(s) | 99 |
| EcoO109I | RGGNCCY | 1 cut(s) | 6 |
| EcoT14I | CCWWGG | 1 cut(s) | 99 |
| ErhI | CCWWGG | 1 cut(s) | 99 |
| FaeI | CATG | 5 cut(s) | 103, 158, 168, 186, 197 |
| FaiI | YATR | 5 cut(s) | 101, 156, 166, 184, 195 |
| FaqI | GGGAC | 2 cut(s) | 151, 195 |
| FatI | CATG | 5 cut(s) | 99, 154, 164, 182, 193 |
| FokI | GGATG | 2 cut(s) | 43, 199 |
| FspBI | CTAG | 1 cut(s) | 274 |
| HaeIII | GGCC | 1 cut(s) | 8 |
| HapII | CCGG | 1 cut(s) | 214 |
| Hin1II | CATG | 5 cut(s) | 103, 158, 168, 186, 197 |
| HinfI | GANTC | 1 cut(s) | 190 |
| HpaII | CCGG | 1 cut(s) | 214 |
| Hpy188I | TCNGA | 1 cut(s) | 75 |
| Hpy188III | TCNNGA | 2 cut(s) | 43, 260 |
| Hpy99I | CGWCG | 1 cut(s) | 88 |
| HpyAV | CCTTC | 1 cut(s) | 101 |
| HpyCH4V | TGCA | 3 cut(s) | 56, 116, 154 |
| HpyF3I | CTNAG | 1 cut(s) | 10 |
| Hsp92II | CATG | 5 cut(s) | 103, 158, 168, 186, 197 |
| Kzo9I | GATC | 2 cut(s) | 39, 75 |
| LpnPI | CCDG | 2 cut(s) | 102, 227 |
| LweI | GCATC | 1 cut(s) | 65 |
| MaeI | CTAG | 1 cut(s) | 274 |
| MalI | GATC | 2 cut(s) | 41, 77 |
| MboI | GATC | 2 cut(s) | 39, 75 |
| MboII | GAAGA | 4 cut(s) | 116, 137, 187, 190 |
| MluCI | AATT | 1 cut(s) | 149 |
| MnlI | CCTC | 5 cut(s) | 19, 70, 73, 76, 128 |
| MspI | CCGG | 1 cut(s) | 214 |
| MspR9I | CCNGG | 1 cut(s) | 214 |
| NciI | CCSGG | 1 cut(s) | 214 |
| NcoI | CCATGG | 1 cut(s) | 99 |
| NdeII | GATC | 2 cut(s) | 39, 75 |
| NlaIII | CATG | 5 cut(s) | 103, 158, 168, 186, 197 |
| PfeI | GAWTC | 1 cut(s) | 190 |
| PspPI | GGNCC | 1 cut(s) | 6 |
| PstI | CTGCAG | 1 cut(s) | 118 |
| RsaI | GTAC | 1 cut(s) | 233 |
| RsaNI | GTAC | 1 cut(s) | 232 |
| Sau3AI | GATC | 2 cut(s) | 39, 75 |
| Sau96I | GGNCC | 1 cut(s) | 6 |
| ScrFI | CCNGG | 1 cut(s) | 214 |
| SetI | ASST | 5 cut(s) | 112, 121, 225, 246, 259 |
| SfaNI | GCATC | 1 cut(s) | 65 |
| SfcI | CTRYAG | 1 cut(s) | 114 |
| SmlI | CTYRAG | 1 cut(s) | 258 |
| SmoI | CTYRAG | 1 cut(s) | 258 |
| Sse9I | AATT | 1 cut(s) | 149 |
| SspMI | CTAG | 1 cut(s) | 274 |
| StyD4I | CCNGG | 1 cut(s) | 212 |
| StyI | CCWWGG | 1 cut(s) | 99 |
| TaqI | TCGA | 1 cut(s) | 133 |
| TasI | AATT | 1 cut(s) | 149 |
| TfiI | GAWTC | 1 cut(s) | 190 |
| TspDTI | ATGAA | 3 cut(s) | 138, 158, 203 |
| XspI | CTAG | 1 cut(s) | 274 |