Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0015962

Physical Location & Seq

Genomic Coordinates Reverse (-)

33759408 .. 33762799

Gene Structure 3392 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ19340

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1563 bp

ATGGAGTCGTTGTCAGTGTTCAACGCAACCACCTCACTCTCACTCTTCTCTTCCTCACTCGACCACCCCAAACCTCAGCTCTCGATCACGCCCTCCTTCTCTCACAGACCCATGCCCAAGCTCGACGTCCACTGCGCCGCCGCGGCGAAGGCCCAATCCGGCGCCACGCCCAAGGAGGCCAAGCTCTGGGGCGGCCGCTTCGAGGAGGGCGTCACCGACGCCGTCGAGCGCTTCACCGAGTCCATCTCCTTCGACAAAGCCCTCTACAAGCATGACATCAGGGGCAGCAAGGCCCACGCCTCCATGCTCGCCAAACAGGGTTTAATCACTGACGAGGATAGGGATAGCATTCATGATGGGCTTACTGAGATTCAGAGGCGAATTGAGAACGGTGAGTTTGAGTGGAGGACTGATAGGGAAGACGTGCATATGAACATTGAGGCGGCGCTGACTGATTTGATCGGCGAGGCGGCCAAGAAGCTCCACACGGCCAGGAGCCGAAACGATCAGGTCTTGACTGATTTTCGGTTGTGGTGTAGAGATGCCATTGATGCGATACTGGTGCAGATTAAGCATCTGCAGGTTTCGTTGGTCCGGTTGGCGATCAAGAATGAGGGTTTGATTGTTCCGGGGTACACTCATTTGCAGAGGGCTCAACCTGTTTTGCTTCAGCATTTGCTCTTGGCCTTTGTTGAGCAGCTTGAACGTGATGCTGGTCGTTTGCTAGATTGCAAAGAAAGGTTGAATTTCTGTCCTTTAGGTGCGTGTGCATTGGCTGGCACTGGACTTCCAATCGATCGGTTTATGACGTCTGCTGCTTTAGGCTTCACTGCTCCTATGAGGAATAGTATTGATGCAGTTTCAGACCGAGATTTTGTCTTGGAATTTCTTTCCGCTAATTCAATCACAGCCATTCATCTCTCCCGCCTTGGTGAAGAATGGGTATTGTGGGCTTCAGAAGAGTTTGGATTTATCACACCAAGTGATGCAGTTTCAACTGGAAGTAGCATCATGCCTCAGAAGAAAAACCCAGATCCAATGGAACTTGTTCGTGGAAAGTCTGCTAGGGTAGTAGGAGACCTGGTTACTCTTCTCATGTTGTGCAAAGGACTTCCTCTTGCTTACAATCGTGATCTGCAGGAAGATAAGGAGCCTGTTTTTGACAGTGTGAAGACAATTTTGGGGATGCTTGAAGTGTCTGCAGAGTTTGCACAGAACATTACCTTTAATAAGGAGAGAATACAAAAGGCTTTACCTGCTGGTCATCTCGATGCCACCACACTTGCTGATTATCTTGTGAATAAGGGAGTACCTTTCAGAACTTCTCATGACATAGTTGGAAGGGCAGTAGCTGTTTGTGTCTCAAAAAGTTGCCAGCTTCAGGAGTTGAGTCTCGATGAGCTGAGAAGTATAAATCCAGTGTTTGACAAGGATGTATACGAGTTTCTTGGAGTGGAGAATGCAGTTAAGAAATTCAGATCATATGGTTCCACAGGGTCAGAATGTGTTGCCACTCAACTTGATCACTGGGTTACTAAACTTGGACTCACCAAAGAGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004056 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006525 GO:0006526 GO:0006591 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009064 GO:0009084 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016053 GO:0016829 GO:0016840 GO:0016842 GO:0019752 GO:0042450 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00220 ko00250 ko01100 ko01110 ko01130 ko01230 map00220 map00250 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

ASL_C2 Lyase_1

Protein Analysis

520

Amino Acids

57.56

Weight (kDa)

5.81

Isoelectric Point (pI)

36.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lyase_1	PF00206	65 - 359	3.1e-71	Lyase
ASL_C2	PF14698	423 - 490	3.5e-26	Argininosuccinate lyase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015962)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10920
fragaria_vesca	FvH4_5g34710
malus_domestica	MD12G1008900.v1.1 MD14G1006400.v1.1
prunus_persica	Prupe.1G532200_v2.0.a1
pyrus_communis	pycom12g00670 pycom14g00490
rosa_chinensis	RchiOBHm_Chr7g0216141
rosa_laevigata	RLG00000002592
rosa_multiflora	Rmu_sc0021916.1_g000001
rosa_roxburghii	Rroxscaffold_3G00243610
rosa_rugosa	Rorug07G0159000
rosa_samantha	Rh7AG296200 Rh7BG288500
rosa_wichuraiana	Rw7G025200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	129, 812
Acc36I	ACCTGC	2 cut(s)	571, 1264
AccB1I	GGYRCC	1 cut(s)	161
AccB7I	CCANNNNNTGG	1 cut(s)	186
AccI	GTMKAC	1 cut(s)	1437
AccII	CGCG	1 cut(s)	143
AciI	CCGC	9 cut(s)	138, 141, 143, 192, 196, 443, 470, 894, 925
AclWI	GGATC	1 cut(s)	1028
AcoI	YGGCCR	3 cut(s)	193, 471, 489
AcsI	RAATTY	3 cut(s)	745, 884, 1472
AcuI	CTGAAG	3 cut(s)	653, 939, 1364
AcyI	GRCGYC	5 cut(s)	126, 162, 210, 219, 809
AdeI	CACNNNGTG	1 cut(s)	983
AfaI	GTAC	2 cut(s)	635, 1311
AfeI	AGCGCT	1 cut(s)	230
AfiI	CCNNNNNNNGG	3 cut(s)	186, 202, 1381
AgsI	TTSAA	6 cut(s)	22, 704, 745, 903, 996, 1193
AjiI	CACGTC	1 cut(s)	424
AjnI	CCWGG	2 cut(s)	491, 1080
AjuI	GAANNNNNNNTTGG	2 cut(s)	1163, 1195
AluBI	AGCT	8 cut(s)	79, 121, 184, 481, 700, 1352, 1378, 1402
AluI	AGCT	8 cut(s)	79, 121, 184, 481, 700, 1352, 1378, 1402
Alw26I	GTCTC	3 cut(s)	1071, 1366, 1397
AlwI	GGATC	1 cut(s)	1028
AlwNI	CAGNNNCTG	1 cut(s)	1352
Aor51HI	AGCGCT	1 cut(s)	230
AoxI	GGCC	8 cut(s)	150, 177, 193, 291, 471, 489, 684, 1557
ApeKI	GCWGC	3 cut(s)	285, 697, 815
ApoI	RAATTY	3 cut(s)	745, 884, 1472
ArsI	GACNNNNNNTTYG	2 cut(s)	857, 889
Asp700I	GAANNNNTTC	1 cut(s)	1047
AspLEI	GCGC	4 cut(s)	137, 164, 231, 448
AspS9I	GGNCC	3 cut(s)	151, 292, 592
AsuC2I	CCSGG	1 cut(s)	630
AsuHPI	GGTGA	5 cut(s)	205, 226, 404, 944, 1540
AvaII	GGWCC	1 cut(s)	592
BanI	GGYRCC	1 cut(s)	161
BanII	GRGCYC	1 cut(s)	655
BbsI	GAAGAC	2 cut(s)	426, 1178
BbvCI	CCTCAGC	1 cut(s)	75
BbvI	GCAGC	3 cut(s)	297, 709, 802
BccI	CCATC	2 cut(s)	251, 350
BceAI	ACGGC	2 cut(s)	206, 504
BcgI	CGANNNNNNTGC	2 cut(s)	544, 578
BciT130I	CCWGG	2 cut(s)	493, 1082
BclI	TGATCA	1 cut(s)	1522
BcnI	CCSGG	1 cut(s)	630
BcoDI	GTCTC	3 cut(s)	1071, 1366, 1397
BfaI	CTAG	2 cut(s)	725, 1065
BfmI	CTRYAG	3 cut(s)	578, 1136, 1200
BfoI	RGCGCY	3 cut(s)	165, 232, 449
BfuAI	ACCTGC	2 cut(s)	571, 1264
BglI	GCCNNNNNGGC	1 cut(s)	143
Bme1390I	CCNGG	3 cut(s)	493, 630, 1082
Bme18I	GGWCC	1 cut(s)	592
BmgBI	CACGTC	1 cut(s)	424
BmgT120I	GGNCC	3 cut(s)	151, 292, 592
BmiI	GGNNCC	4 cut(s)	163, 497, 1152, 1489
BmrFI	CCNGG	3 cut(s)	493, 630, 1082
BmrI	ACTGGG	1 cut(s)	1537
BmsI	GCATC	9 cut(s)	532, 541, 583, 700, 844, 976, 1017, 1176, 1261
BmuI	ACTGGG	1 cut(s)	1537
BpiI	GAAGAC	2 cut(s)	426, 1178
BplI	GAGNNNNNCTC	2 cut(s)	230, 262
Bpu10I	CCTNAGC	1 cut(s)	75
BpuMI	CCSGG	1 cut(s)	630
Bsa29I	ATCGAT	1 cut(s)	795
BsaHI	GRCGYC	5 cut(s)	126, 162, 210, 219, 809
BsaI	GGTCTC	1 cut(s)	1071
BsaJI	CCNNGG	4 cut(s)	141, 171, 629, 928
BsaWI	WCCGGW	1 cut(s)	594
BsaXI	ACNNNNNCTCC	3 cut(s)	26, 1068, 1098
Bsc4I	CCNNNNNNNGG	3 cut(s)	186, 202, 1381
Bse1I	ACTGG	5 cut(s)	564, 787, 1003, 1418, 1532
BseBI	CCWGG	2 cut(s)	493, 1082
BseCI	ATCGAT	1 cut(s)	795
BseDI	CCNNGG	4 cut(s)	141, 171, 629, 928
BseGI	GGATG	2 cut(s)	1191, 1438
BseLI	CCNNNNNNNGG	3 cut(s)	186, 202, 1381
BseMII	CTCAG	4 cut(s)	89, 357, 1031, 1394
BseNI	ACTGG	5 cut(s)	564, 787, 1003, 1418, 1532
BseRI	GAGGAG	1 cut(s)	218
BseX3I	CGGCCG	1 cut(s)	193
BseXI	GCAGC	3 cut(s)	297, 709, 802
BsgI	GTGCAG	1 cut(s)	584
Bsh1236I	CGCG	1 cut(s)	143
Bsh1285I	CGRYCG	2 cut(s)	196, 799
BshFI	GGCC	8 cut(s)	152, 179, 195, 293, 473, 491, 686, 1559
BshNI	GGYRCC	1 cut(s)	161
BshVI	ATCGAT	1 cut(s)	795
BsiEI	CGRYCG	2 cut(s)	196, 799
BsiSI	CCGG	3 cut(s)	159, 595, 629
BslI	CCNNNNNNNGG	3 cut(s)	186, 202, 1381
BsmAI	GTCTC	3 cut(s)	1071, 1366, 1397
BsmI	GAATGC	2 cut(s)	348, 1465
BsnI	GGCC	8 cut(s)	152, 179, 195, 293, 473, 491, 686, 1559
Bso31I	GGTCTC	1 cut(s)	1071
Bsp1286I	GDGCHC	1 cut(s)	655
Bsp143I	GATC	9 cut(s)	84, 459, 505, 603, 796, 1033, 1132, 1478, 1522
BspACI	CCGC	9 cut(s)	138, 141, 143, 192, 196, 443, 470, 894, 925
BspANI	GGCC	8 cut(s)	152, 179, 195, 293, 473, 491, 686, 1559
BspCNI	CTCAG	4 cut(s)	88, 358, 1030, 1395
BspDI	ATCGAT	1 cut(s)	795
BspFNI	CGCG	1 cut(s)	143
BspHI	TCATGA	2 cut(s)	352, 1327
BspLI	GGNNCC	4 cut(s)	163, 497, 1152, 1489
BspMAI	CTGCAG	3 cut(s)	582, 1140, 1204
BspMI	ACCTGC	2 cut(s)	571, 1264
BspPI	GGATC	1 cut(s)	1028
BspT107I	GGYRCC	1 cut(s)	161
BspTNI	GGTCTC	1 cut(s)	1071
BsrI	ACTGG	5 cut(s)	564, 787, 1003, 1418, 1532
BssECI	CCNNGG	4 cut(s)	141, 171, 629, 928
BssMI	GATC	9 cut(s)	84, 459, 505, 603, 796, 1033, 1132, 1478, 1522
BssNAI	GTATAC	1 cut(s)	1438
BssNI	GRCGYC	5 cut(s)	126, 162, 210, 219, 809
BssT1I	CCWWGG	2 cut(s)	171, 928
Bst1107I	GTATAC	1 cut(s)	1438
Bst2UI	CCWGG	2 cut(s)	493, 1082
Bst4CI	ACNGT	2 cut(s)	392, 1166
Bst6I	CTCTTC	4 cut(s)	50, 55, 954, 1095
BstACI	GRCGYC	5 cut(s)	126, 162, 210, 219, 809
BstAPI	GCANNNNNTGC	1 cut(s)	1208
BstC8I	GCNNGC	3 cut(s)	309, 778, 1376
BstDEI	CTNAG	4 cut(s)	75, 366, 1017, 1403
BstDSI	CCRYGG	1 cut(s)	141
BstF5I	GGATG	2 cut(s)	1191, 1438
BstFNI	CGCG	1 cut(s)	143
BstH2I	RGCGCY	3 cut(s)	165, 232, 449
BstHHI	GCGC	4 cut(s)	137, 164, 231, 448
BstKTI	GATC	9 cut(s)	87, 462, 508, 606, 799, 1036, 1135, 1481, 1525
BstMAI	GTCTC	3 cut(s)	1071, 1366, 1397
BstMBI	GATC	9 cut(s)	84, 459, 505, 603, 796, 1033, 1132, 1478, 1522
BstMCI	CGRYCG	2 cut(s)	196, 799
BstMWI	GCNNNNNNNGC	6 cut(s)	143, 149, 551, 571, 1208, 1256
BstNI	CCWGG	2 cut(s)	493, 1082
BstSCI	CCNGG	3 cut(s)	491, 628, 1080
BstSFI	CTRYAG	3 cut(s)	578, 1136, 1200
BstUI	CGCG	1 cut(s)	143
BstV1I	GCAGC	3 cut(s)	297, 709, 802
BstV2I	GAAGAC	2 cut(s)	426, 1178
BstX2I	RGATCY	1 cut(s)	1033
BstYI	RGATCY	1 cut(s)	1033
BstZ17I	GTATAC	1 cut(s)	1438
BstZI	CGGCCG	1 cut(s)	193
Bsu15I	ATCGAT	1 cut(s)	795
BsuRI	GGCC	8 cut(s)	152, 179, 195, 293, 473, 491, 686, 1559
BsuTUI	ATCGAT	1 cut(s)	795
BtgI	CCRYGG	1 cut(s)	141
BtrI	CACGTC	1 cut(s)	424
BtsCI	GGATG	2 cut(s)	1191, 1438
BtsI	GCAGTG	2 cut(s)	130, 828
BtsIMutI	CAGTG	8 cut(s)	21, 130, 327, 780, 828, 1171, 1425, 1525
BveI	ACCTGC	2 cut(s)	571, 1264
Cac8I	GCNNGC	3 cut(s)	309, 778, 1376
CaiI	CAGNNNCTG	1 cut(s)	1352
CciI	TCATGA	2 cut(s)	352, 1327
CciNI	GCGGCCGC	1 cut(s)	193
CfoI	GCGC	4 cut(s)	137, 164, 231, 448
Cfr13I	GGNCC	3 cut(s)	151, 292, 592
Cfr42I	CCGCGG	1 cut(s)	144
ClaI	ATCGAT	1 cut(s)	795
CseI	GACGC	2 cut(s)	199, 227
CsiI	ACCWGGT	1 cut(s)	1080
Csp6I	GTAC	2 cut(s)	634, 1310
CspCI	CAANNNNNGTGG	4 cut(s)	1264, 1299, 1501, 1536
CviAII	CATG	7 cut(s)	112, 272, 304, 353, 1012, 1096, 1328
CviQI	GTAC	2 cut(s)	634, 1310
DdeI	CTNAG	4 cut(s)	75, 366, 1017, 1403
DinI	GGCGCC	1 cut(s)	163
DpnI	GATC	9 cut(s)	86, 461, 507, 605, 798, 1035, 1134, 1480, 1524
DpnII	GATC	9 cut(s)	84, 459, 505, 603, 796, 1033, 1132, 1478, 1522
DraIII	CACNNNGTG	1 cut(s)	983
EaeI	YGGCCR	3 cut(s)	193, 471, 489
EagI	CGGCCG	1 cut(s)	193
Eam1104I	CTCTTC	4 cut(s)	50, 55, 954, 1095
EarI	CTCTTC	4 cut(s)	50, 55, 954, 1095
EclXI	CGGCCG	1 cut(s)	193
Eco130I	CCWWGG	2 cut(s)	171, 928
Eco147I	AGGCCT	1 cut(s)	1559
Eco24I	GRGCYC	1 cut(s)	655
Eco31I	GGTCTC	1 cut(s)	1071
Eco47I	GGWCC	1 cut(s)	592
Eco47III	AGCGCT	1 cut(s)	230
Eco52I	CGGCCG	1 cut(s)	193
Eco57I	CTGAAG	3 cut(s)	653, 939, 1364
EcoRII	CCWGG	2 cut(s)	491, 1080
EcoT14I	CCWWGG	2 cut(s)	171, 928
EcoT38I	GRGCYC	1 cut(s)	655
EgeI	GGCGCC	1 cut(s)	163
EheI	GGCGCC	1 cut(s)	163
ErhI	CCWWGG	2 cut(s)	171, 928
FaeI	CATG	7 cut(s)	115, 275, 307, 356, 1015, 1099, 1331
FatI	CATG	7 cut(s)	111, 271, 303, 352, 1011, 1095, 1327
FauI	CCCGC	1 cut(s)	932
FauNDI	CATATG	2 cut(s)	429, 1483
FbaI	TGATCA	1 cut(s)	1522
FblI	GTMKAC	1 cut(s)	1437
FokI	GGATG	2 cut(s)	1198, 1445
FriOI	GRGCYC	1 cut(s)	655
FspBI	CTAG	2 cut(s)	725, 1065
GlaI	GCGC	4 cut(s)	136, 163, 230, 447
HaeII	RGCGCY	3 cut(s)	165, 232, 449
HaeIII	GGCC	8 cut(s)	152, 179, 195, 293, 473, 491, 686, 1559
HapII	CCGG	3 cut(s)	159, 595, 629
HgaI	GACGC	2 cut(s)	199, 227
HhaI	GCGC	4 cut(s)	137, 164, 231, 448
Hin1I	GRCGYC	5 cut(s)	126, 162, 210, 219, 809
Hin1II	CATG	7 cut(s)	115, 275, 307, 356, 1015, 1099, 1331
Hin6I	GCGC	4 cut(s)	135, 162, 229, 446
HinP1I	GCGC	4 cut(s)	135, 162, 229, 446
HinfI	GANTC	5 cut(s)	5, 239, 370, 1390, 1545
HpaII	CCGG	3 cut(s)	159, 595, 629
HphI	GGTGA	5 cut(s)	205, 226, 404, 944, 1540
Hpy166II	GTNNAC	3 cut(s)	130, 636, 1438
Hpy188I	TCNGA	7 cut(s)	375, 865, 958, 1020, 1319, 1478, 1501
Hpy188III	TCNNGA	9 cut(s)	82, 353, 514, 607, 1130, 1268, 1328, 1382, 1394
Hpy8I	GTNNAC	3 cut(s)	130, 636, 1438
Hpy99I	CGWCG	3 cut(s)	128, 221, 227
HpyAV	CCTTC	4 cut(s)	106, 142, 259, 1335
HpyCH4III	ACNGT	2 cut(s)	392, 1166
HpyCH4IV	ACGT	4 cut(s)	126, 423, 706, 809
HpyF10VI	GCNNNNNNNGC	6 cut(s)	143, 149, 551, 571, 1208, 1256
HpyF3I	CTNAG	4 cut(s)	75, 366, 1017, 1403
HpySE526I	ACGT	4 cut(s)	126, 423, 706, 809
Hsp92I	GRCGYC	5 cut(s)	126, 162, 210, 219, 809
Hsp92II	CATG	7 cut(s)	115, 275, 307, 356, 1015, 1099, 1331
HspAI	GCGC	4 cut(s)	135, 162, 229, 446
KasI	GGCGCC	1 cut(s)	161
Ksp22I	TGATCA	1 cut(s)	1522
KspI	CCGCGG	1 cut(s)	144
Kzo9I	GATC	9 cut(s)	84, 459, 505, 603, 796, 1033, 1132, 1478, 1522
LmnI	GCTCC	4 cut(s)	486, 495, 838, 1150
Lsp1109I	GCAGC	3 cut(s)	297, 709, 802
LweI	GCATC	9 cut(s)	532, 541, 583, 700, 844, 976, 1017, 1176, 1261
MabI	ACCWGGT	1 cut(s)	1080
MaeI	CTAG	2 cut(s)	725, 1065
MaeII	ACGT	4 cut(s)	126, 423, 706, 809
MaeIII	GTNAC	3 cut(s)	211, 1084, 1531
MalI	GATC	9 cut(s)	86, 461, 507, 605, 798, 1035, 1134, 1480, 1524
MboI	GATC	9 cut(s)	84, 459, 505, 603, 796, 1033, 1132, 1478, 1522
MboII	GAAGA	9 cut(s)	37, 42, 431, 947, 971, 1033, 1082, 1154, 1183
MflI	RGATCY	1 cut(s)	1033
MhlI	GDGCHC	1 cut(s)	655
MluCI	AATT	6 cut(s)	381, 745, 884, 898, 1176, 1472
Mly113I	GGCGCC	1 cut(s)	162
MlyI	GAGTC	4 cut(s)	14, 248, 1399, 1539
MmeI	TCCRAC	1 cut(s)	1318
MroXI	GAANNNNTTC	1 cut(s)	1047
MseI	TTAA	4 cut(s)	323, 570, 1227, 1467
MslI	CAYNNNNRTG	1 cut(s)	1269
MspA1I	CMGCKG	1 cut(s)	143
MspI	CCGG	3 cut(s)	159, 595, 629
MspR9I	CCNGG	3 cut(s)	493, 630, 1082
Mva1269I	GAATGC	2 cut(s)	348, 1465
MvaI	CCWGG	2 cut(s)	493, 1082
MvnI	CGCG	1 cut(s)	143
MwoI	GCNNNNNNNGC	6 cut(s)	143, 149, 551, 571, 1208, 1256
NarI	GGCGCC	1 cut(s)	162
NciI	CCSGG	1 cut(s)	630
NdeI	CATATG	2 cut(s)	429, 1483
NdeII	GATC	9 cut(s)	84, 459, 505, 603, 796, 1033, 1132, 1478, 1522
NlaIII	CATG	7 cut(s)	115, 275, 307, 356, 1015, 1099, 1331
NlaIV	GGNNCC	4 cut(s)	163, 497, 1152, 1489
NmuCI	GTSAC	1 cut(s)	211
NotI	GCGGCCGC	1 cut(s)	193
PagI	TCATGA	2 cut(s)	352, 1327
PceI	AGGCCT	1 cut(s)	1559
PcsI	WCGNNNNNNNCGW	1 cut(s)	207
PctI	GAATGC	2 cut(s)	348, 1465
PdmI	GAANNNNTTC	1 cut(s)	1047
PfeI	GAWTC	1 cut(s)	370
PflFI	GACNNNGTC	1 cut(s)	221
PflMI	CCANNNNNTGG	1 cut(s)	186
Ple19I	CGATCG	1 cut(s)	799
PleI	GAGTC	4 cut(s)	13, 247, 1398, 1539
PluTI	GGCGCC	1 cut(s)	165
PpsI	GAGTC	4 cut(s)	13, 247, 1398, 1539
Psp6I	CCWGG	2 cut(s)	491, 1080
PspGI	CCWGG	2 cut(s)	491, 1080
PspN4I	GGNNCC	4 cut(s)	163, 497, 1152, 1489
PspPI	GGNCC	3 cut(s)	151, 292, 592
PstI	CTGCAG	3 cut(s)	582, 1140, 1204
PstNI	CAGNNNCTG	1 cut(s)	1352
PsuI	RGATCY	1 cut(s)	1033
PsyI	GACNNNGTC	1 cut(s)	221
PvuI	CGATCG	1 cut(s)	799
RsaI	GTAC	2 cut(s)	635, 1311
RsaNI	GTAC	2 cut(s)	634, 1310
RseI	CAYNNNNRTG	1 cut(s)	1269
SacII	CCGCGG	1 cut(s)	144
SaqAI	TTAA	4 cut(s)	323, 570, 1227, 1467
Sau3AI	GATC	9 cut(s)	84, 459, 505, 603, 796, 1033, 1132, 1478, 1522
Sau96I	GGNCC	3 cut(s)	151, 292, 592
SchI	GAGTC	4 cut(s)	14, 248, 1399, 1539
ScrFI	CCNGG	3 cut(s)	493, 630, 1082
SduI	GDGCHC	1 cut(s)	655
SexAI	ACCWGGT	1 cut(s)	1080
SfaNI	GCATC	9 cut(s)	532, 541, 583, 700, 844, 976, 1017, 1176, 1261
SfcI	CTRYAG	3 cut(s)	578, 1136, 1200
SfoI	GGCGCC	1 cut(s)	163
Sfr303I	CCGCGG	1 cut(s)	144
SgrBI	CCGCGG	1 cut(s)	144
SinI	GGWCC	1 cut(s)	592
SmiMI	CAYNNNNRTG	1 cut(s)	1269
Sse9I	AATT	6 cut(s)	381, 745, 884, 898, 1176, 1472
SseBI	AGGCCT	1 cut(s)	1559
SsiI	CCGC	9 cut(s)	138, 141, 143, 192, 196, 443, 470, 894, 925
SspDI	GGCGCC	1 cut(s)	161
SspMI	CTAG	2 cut(s)	725, 1065
StuI	AGGCCT	1 cut(s)	1559
StyD4I	CCNGG	3 cut(s)	491, 628, 1080
StyI	CCWWGG	2 cut(s)	171, 928
TaaI	ACNGT	2 cut(s)	392, 1166
TaiI	ACGT	4 cut(s)	129, 426, 709, 812
TaqI	TCGA	9 cut(s)	60, 83, 123, 201, 225, 252, 795, 1269, 1395
TaqII	GACCGA	1 cut(s)	882
TasI	AATT	6 cut(s)	381, 745, 884, 898, 1176, 1472
TauI	GCSGC	7 cut(s)	140, 143, 146, 195, 198, 446, 473
TfiI	GAWTC	1 cut(s)	370
Tru1I	TTAA	4 cut(s)	323, 570, 1227, 1467
Tru9I	TTAA	4 cut(s)	323, 570, 1227, 1467
TscAI	CASTG	8 cut(s)	21, 137, 334, 787, 835, 1171, 1425, 1532
TseFI	GTSAC	1 cut(s)	211
TseI	GCWGC	3 cut(s)	285, 697, 815
Tsp45I	GTSAC	1 cut(s)	211
TspDTI	ATGAA	3 cut(s)	341, 446, 905
TspRI	CASTG	8 cut(s)	21, 137, 334, 787, 835, 1171, 1425, 1532
Tth111I	GACNNNGTC	1 cut(s)	221
Van91I	CCANNNNNTGG	1 cut(s)	186
VpaK11BI	GGWCC	1 cut(s)	592
XapI	RAATTY	3 cut(s)	745, 884, 1472
XmiI	GTMKAC	1 cut(s)	1437
XmnI	GAANNNNTTC	1 cut(s)	1047
XspI	CTAG	2 cut(s)	725, 1065
ZraI	GACGTC	2 cut(s)	127, 810

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.