Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0015962

Physical Location & Seq

Genomic Coordinates Forward (+)

36088228 .. 36091151

Gene Structure 2924 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00243610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGGAGTCGTTGTCAGCGTTCAACGCAACCACCTCACTGTCACTCTTCTCTTCCTCACTCGACCACCCCAAACCTCAGCTCTCAATCACACCCTCCTCCTCCTCTCACAGACCCATGCCCAAGCTCGACGTCCACTGCGCCGCCGCGGCCCAGGCCCAATCCGGCGCCAAGCCCAAGGAGGCCAAGCTCTGGGGCGGCCGCTTCGAGGAGGGCGTCACCGACGCCGTCGAGCGCTTCACCGAGTCCATCTCCTTCGACAAAGCCCTCTACAAGCATGACATCATGGGCAGCAAGGCCCACGCCTCCATGCTCGCCAAACAGGGTTTAATCACTGACGAGGATAGGGATAGCATTCATGAAGGGCTTACTGAGATTCAGAGGCGAATTGAGAACGGTGAGTTTGAGTGGAGGACTGATAGGGAAGACGTGCATATGAACATTGAGGCGGCGCTGACTGATTTGATCGGCGAGGCGGCCAAGAAGCTCCACACGGCCAGGAGCCGAAACGATCAGGTCTTGACTGATTTTCGGTTGTGGTGTAGAGATGCCATTGATGCCATTCTGGTGCAGATTAAGCATCTGCAGGTTTCATTGGTCCGGTTGGCGATCAAGAATGAGGGTTTGATTGTTCCGGGGTACACTCATTTGCAGAGGGCTCAACCTGTTTTGCTTCAGCATTTGCTCTTGGCCTTTGTTGAACAGCTTGAACGTGATGCTGGGCGCTTGCTAGATTGCAAAGAAAGGTTGAATTTCTGTCCTTTAGGTGCGTGTGCATTGGCTGGCACTGGACTTCCAATCGATCGGTTTATGACGTCTGATGCTTTAGGCTTCACTGCTCCTATGAGGAATAGTATTGATGCAGTTTCAGACCGAGATTTTGTCTTGGAATTTCTTTCCTCTAATTCAATCACAGCCATTCATCTCTCCCGCCTTGGTGAAGAATGGGTATTGTGGGCTTCAGAAGAGTTTGGATTTATCACACCAAGTGATGCAGTTTCAACTGGTAGTAGCATCATGCCTCAGAAGAAAAACCCAGATCCAATGGAACTTGTTCGTGGAAAGTCTGCTAGGGTAGTAGGAGACCTGGTTACTCTTCTCATGTTGTGCAAAGGACTTCCTCTTGCTTACAATCGTGATTTGCAGGAAGATAAGGAGCCTGTTTTTGACAGTGTGAAGACAATTTTGGGGATGCTTGAAGTGTCTTCAGAGTTTGCACAGAACATTACCTTTAATAAGGAGAGAATACAAAAGGCTTTACCTGCTGGTCATCTCGATGCCACCACACTTGCTGATTATCTTGTGAATAAGTTGCTTATCTGGTTCTTTATACAGGGAGTACCTTTCAGAACTTCTCATGACATAGTTGGAAGGGCAGTAGCTGTTTGTGTCTCAAAAAGTTGCCAGCTTCAGGAGTTGAGTCTCGATGAGCTGAGAAGTATAAATCCAGTGTTTGACAAGGATGTCTACGAGTTTCTTGGAGTGGAGAATGCAGTTAAGAAATTCAGATCATATGGTTCCACAGGGTCAGAATGTGTTGCCACTCAACTTGATCACTGGGTTGCTAAACTTGAACTCACCAAAGACGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004056 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006525 GO:0006526 GO:0006591 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009064 GO:0009084 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016053 GO:0016829 GO:0016840 GO:0016842 GO:0019752 GO:0042450 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00220 ko00250 ko01100 ko01110 ko01130 ko01230 map00220 map00250 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

ASL_C2 Lyase_1

Protein Analysis

529

Amino Acids

58.74

Weight (kDa)

5.59

Isoelectric Point (pI)

38.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lyase_1	PF00206	66 - 360	2.3e-70	Lyase
ASL_C2	PF14698	424 - 499	8.2e-21	Argininosuccinate lyase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015962)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10920
fragaria_vesca	FvH4_5g34710
malus_domestica	MD12G1008900.v1.1 MD14G1006400.v1.1
prunus_persica	Prupe.1G532200_v2.0.a1
pyrus_communis	pycom12g00670 pycom14g00490
rosa_chinensis	RchiOBHm_Chr7g0216141
rosa_laevigata	RLG00000002592
rosa_multiflora	Rmu_sc0021916.1_g000001
rosa_roxburghii	Rroxscaffold_3G00243610
rosa_rugosa	Rorug07G0159000
rosa_samantha	Rh7AG296200 Rh7BG288500
rosa_wichuraiana	Rw7G025200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1460
AatII	GACGTC	2 cut(s)	132, 815
Acc36I	ACCTGC	2 cut(s)	574, 1267
AccB1I	GGYRCC	1 cut(s)	164
AccB7I	CCANNNNNTGG	1 cut(s)	189
AccI	GTMKAC	1 cut(s)	1464
AccII	CGCG	1 cut(s)	146
AciI	CCGC	8 cut(s)	141, 144, 146, 195, 199, 446, 473, 928
AclWI	GGATC	1 cut(s)	1031
AcoI	YGGCCR	3 cut(s)	196, 474, 492
AcsI	RAATTY	3 cut(s)	748, 887, 1499
AcuI	CTGAAG	4 cut(s)	656, 942, 1188, 1391
AcyI	GRCGYC	6 cut(s)	129, 165, 213, 222, 812, 1584
AdeI	CACNNNGTG	1 cut(s)	986
AfaI	GTAC	2 cut(s)	638, 1338
AfeI	AGCGCT	1 cut(s)	233
AfiI	CCNNNNNNNGG	3 cut(s)	189, 205, 1408
AgsI	TTSAA	8 cut(s)	22, 698, 707, 748, 906, 999, 1196, 1571
AjiI	CACGTC	1 cut(s)	427
AjnI	CCWGG	3 cut(s)	150, 494, 1083
AjuI	GAANNNNNNNTTGG	2 cut(s)	1166, 1198
AluBI	AGCT	8 cut(s)	79, 124, 187, 484, 703, 1379, 1405, 1429
AluI	AGCT	8 cut(s)	79, 124, 187, 484, 703, 1379, 1405, 1429
Alw26I	GTCTC	3 cut(s)	1074, 1393, 1424
AlwI	GGATC	1 cut(s)	1031
AlwNI	CAGNNNCTG	1 cut(s)	1379
Aor51HI	AGCGCT	1 cut(s)	233
AoxI	GGCC	8 cut(s)	147, 153, 180, 196, 294, 474, 492, 687
ApeKI	GCWGC	1 cut(s)	288
ApoI	RAATTY	3 cut(s)	748, 887, 1499
ArsI	GACNNNNNNTTYG	2 cut(s)	860, 892
Asp700I	GAANNNNTTC	1 cut(s)	1050
AspLEI	GCGC	5 cut(s)	140, 167, 234, 451, 723
AspS9I	GGNCC	4 cut(s)	148, 154, 295, 595
AsuC2I	CCSGG	1 cut(s)	633
AsuHPI	GGTGA	5 cut(s)	208, 229, 407, 947, 1567
AvaII	GGWCC	1 cut(s)	595
BanI	GGYRCC	1 cut(s)	164
BanII	GRGCYC	1 cut(s)	658
BbsI	GAAGAC	3 cut(s)	429, 1181, 1194
BbvCI	CCTCAGC	1 cut(s)	75
BbvI	GCAGC	1 cut(s)	300
BccI	CCATC	1 cut(s)	254
BceAI	ACGGC	2 cut(s)	209, 507
BciT130I	CCWGG	3 cut(s)	152, 496, 1085
BclI	TGATCA	1 cut(s)	1549
BcnI	CCSGG	1 cut(s)	633
BcoDI	GTCTC	3 cut(s)	1074, 1393, 1424
BfaI	CTAG	2 cut(s)	728, 1068
BfmI	CTRYAG	1 cut(s)	581
BfoI	RGCGCY	4 cut(s)	168, 235, 452, 724
BfuAI	ACCTGC	2 cut(s)	574, 1267
BglI	GCCNNNNNGGC	1 cut(s)	146
BisI	GCNGC	8 cut(s)	141, 144, 147, 196, 199, 289, 447, 474
BlsI	GCNGC	8 cut(s)	142, 145, 148, 197, 200, 290, 448, 475
Bme1390I	CCNGG	4 cut(s)	152, 496, 633, 1085
Bme18I	GGWCC	1 cut(s)	595
BmgBI	CACGTC	1 cut(s)	427
BmgT120I	GGNCC	4 cut(s)	148, 154, 295, 595
BmiI	GGNNCC	4 cut(s)	166, 500, 1155, 1516
BmrFI	CCNGG	4 cut(s)	152, 496, 633, 1085
BmrI	ACTGGG	1 cut(s)	1564
BmuI	ACTGGG	1 cut(s)	1564
BpiI	GAAGAC	3 cut(s)	429, 1181, 1194
BplI	GAGNNNNNCTC	2 cut(s)	233, 265
Bpu10I	CCTNAGC	1 cut(s)	75
BpuMI	CCSGG	1 cut(s)	633
Bsa29I	ATCGAT	1 cut(s)	798
BsaHI	GRCGYC	6 cut(s)	129, 165, 213, 222, 812, 1584
BsaI	GGTCTC	1 cut(s)	1074
BsaJI	CCNNGG	5 cut(s)	144, 150, 174, 632, 931
BsaWI	WCCGGW	1 cut(s)	597
BsaXI	ACNNNNNCTCC	3 cut(s)	26, 1071, 1101
Bsc4I	CCNNNNNNNGG	3 cut(s)	189, 205, 1408
Bse1I	ACTGG	4 cut(s)	790, 1006, 1445, 1559
BseBI	CCWGG	3 cut(s)	152, 496, 1085
BseCI	ATCGAT	1 cut(s)	798
BseDI	CCNNGG	5 cut(s)	144, 150, 174, 632, 931
BseGI	GGATG	2 cut(s)	1194, 1465
BseLI	CCNNNNNNNGG	3 cut(s)	189, 205, 1408
BseMII	CTCAG	4 cut(s)	89, 360, 1034, 1421
BseNI	ACTGG	4 cut(s)	790, 1006, 1445, 1559
BseRI	GAGGAG	4 cut(s)	85, 88, 91, 221
BseX3I	CGGCCG	1 cut(s)	196
BseXI	GCAGC	1 cut(s)	300
BseYI	CCCAGC	1 cut(s)	716
BsgI	GTGCAG	1 cut(s)	587
Bsh1236I	CGCG	1 cut(s)	146
Bsh1285I	CGRYCG	2 cut(s)	199, 802
BshFI	GGCC	8 cut(s)	149, 155, 182, 198, 296, 476, 494, 689
BshNI	GGYRCC	1 cut(s)	164
BshVI	ATCGAT	1 cut(s)	798
BsiEI	CGRYCG	2 cut(s)	199, 802
BsiSI	CCGG	3 cut(s)	162, 598, 632
BslI	CCNNNNNNNGG	3 cut(s)	189, 205, 1408
BsmAI	GTCTC	3 cut(s)	1074, 1393, 1424
BsmI	GAATGC	2 cut(s)	351, 1492
BsnI	GGCC	8 cut(s)	149, 155, 182, 198, 296, 476, 494, 689
Bso31I	GGTCTC	1 cut(s)	1074
Bsp1286I	GDGCHC	1 cut(s)	658
Bsp143I	GATC	7 cut(s)	462, 508, 606, 799, 1036, 1505, 1549
BspACI	CCGC	8 cut(s)	141, 144, 146, 195, 199, 446, 473, 928
BspANI	GGCC	8 cut(s)	149, 155, 182, 198, 296, 476, 494, 689
BspCNI	CTCAG	4 cut(s)	88, 361, 1033, 1422
BspDI	ATCGAT	1 cut(s)	798
BspFNI	CGCG	1 cut(s)	146
BspHI	TCATGA	2 cut(s)	355, 1354
BspLI	GGNNCC	4 cut(s)	166, 500, 1155, 1516
BspMAI	CTGCAG	1 cut(s)	585
BspMI	ACCTGC	2 cut(s)	574, 1267
BspPI	GGATC	1 cut(s)	1031
BspT107I	GGYRCC	1 cut(s)	164
BspTNI	GGTCTC	1 cut(s)	1074
BsrI	ACTGG	4 cut(s)	790, 1006, 1445, 1559
BssECI	CCNNGG	5 cut(s)	144, 150, 174, 632, 931
BssMI	GATC	7 cut(s)	462, 508, 606, 799, 1036, 1505, 1549
BssNI	GRCGYC	6 cut(s)	129, 165, 213, 222, 812, 1584
BssT1I	CCWWGG	2 cut(s)	174, 931
Bst2UI	CCWGG	3 cut(s)	152, 496, 1085
Bst4CI	ACNGT	3 cut(s)	39, 395, 1169
Bst6I	CTCTTC	4 cut(s)	50, 55, 957, 1098
BstACI	GRCGYC	6 cut(s)	129, 165, 213, 222, 812, 1584
BstC8I	GCNNGC	4 cut(s)	312, 725, 781, 1403
BstDEI	CTNAG	4 cut(s)	75, 369, 1020, 1430
BstDSI	CCRYGG	1 cut(s)	144
BstF5I	GGATG	2 cut(s)	1194, 1465
BstFNI	CGCG	1 cut(s)	146
BstH2I	RGCGCY	4 cut(s)	168, 235, 452, 724
BstHHI	GCGC	5 cut(s)	140, 167, 234, 451, 723
BstKTI	GATC	7 cut(s)	465, 511, 609, 802, 1039, 1508, 1552
BstMAI	GTCTC	3 cut(s)	1074, 1393, 1424
BstMBI	GATC	7 cut(s)	462, 508, 606, 799, 1036, 1505, 1549
BstMCI	CGRYCG	2 cut(s)	199, 802
BstMWI	GCNNNNNNNGC	6 cut(s)	23, 146, 152, 554, 574, 1259
BstNI	CCWGG	3 cut(s)	152, 496, 1085
BstSCI	CCNGG	4 cut(s)	150, 494, 631, 1083
BstSFI	CTRYAG	1 cut(s)	581
BstUI	CGCG	1 cut(s)	146
BstV1I	GCAGC	1 cut(s)	300
BstV2I	GAAGAC	3 cut(s)	429, 1181, 1194
BstX2I	RGATCY	1 cut(s)	1036
BstYI	RGATCY	1 cut(s)	1036
BstZI	CGGCCG	1 cut(s)	196
Bsu15I	ATCGAT	1 cut(s)	798
BsuRI	GGCC	8 cut(s)	149, 155, 182, 198, 296, 476, 494, 689
BsuTUI	ATCGAT	1 cut(s)	798
BtgI	CCRYGG	1 cut(s)	144
BtrI	CACGTC	1 cut(s)	427
BtsCI	GGATG	2 cut(s)	1194, 1465
BtsI	GCAGTG	2 cut(s)	133, 831
BtsIMutI	CAGTG	8 cut(s)	35, 133, 330, 783, 831, 1174, 1452, 1552
BveI	ACCTGC	2 cut(s)	574, 1267
Cac8I	GCNNGC	4 cut(s)	312, 725, 781, 1403
CaiI	CAGNNNCTG	1 cut(s)	1379
CciI	TCATGA	2 cut(s)	355, 1354
CciNI	GCGGCCGC	1 cut(s)	196
CfoI	GCGC	5 cut(s)	140, 167, 234, 451, 723
Cfr13I	GGNCC	4 cut(s)	148, 154, 295, 595
Cfr42I	CCGCGG	1 cut(s)	147
ClaI	ATCGAT	1 cut(s)	798
CseI	GACGC	2 cut(s)	202, 230
CsiI	ACCWGGT	1 cut(s)	1083
Csp6I	GTAC	2 cut(s)	637, 1337
CspCI	CAANNNNNGTGG	4 cut(s)	1267, 1302, 1528, 1563
CviAII	CATG	8 cut(s)	115, 275, 283, 307, 356, 1015, 1099, 1355
CviQI	GTAC	2 cut(s)	637, 1337
DdeI	CTNAG	4 cut(s)	75, 369, 1020, 1430
DinI	GGCGCC	1 cut(s)	166
DpnI	GATC	7 cut(s)	464, 510, 608, 801, 1038, 1507, 1551
DpnII	GATC	7 cut(s)	462, 508, 606, 799, 1036, 1505, 1549
DraIII	CACNNNGTG	1 cut(s)	986
DrdI	GACNNNNNNGTC	1 cut(s)	1460
DseDI	GACNNNNNNGTC	1 cut(s)	1460
EaeI	YGGCCR	3 cut(s)	196, 474, 492
EagI	CGGCCG	1 cut(s)	196
Eam1104I	CTCTTC	4 cut(s)	50, 55, 957, 1098
EarI	CTCTTC	4 cut(s)	50, 55, 957, 1098
EclXI	CGGCCG	1 cut(s)	196
Eco130I	CCWWGG	2 cut(s)	174, 931
Eco24I	GRGCYC	1 cut(s)	658
Eco31I	GGTCTC	1 cut(s)	1074
Eco47I	GGWCC	1 cut(s)	595
Eco47III	AGCGCT	1 cut(s)	233
Eco52I	CGGCCG	1 cut(s)	196
Eco57I	CTGAAG	4 cut(s)	656, 942, 1188, 1391
EcoRII	CCWGG	3 cut(s)	150, 494, 1083
EcoT14I	CCWWGG	2 cut(s)	174, 931
EcoT38I	GRGCYC	1 cut(s)	658
EgeI	GGCGCC	1 cut(s)	166
EheI	GGCGCC	1 cut(s)	166
ErhI	CCWWGG	2 cut(s)	174, 931
FaeI	CATG	8 cut(s)	118, 278, 286, 310, 359, 1018, 1102, 1358
FatI	CATG	8 cut(s)	114, 274, 282, 306, 355, 1014, 1098, 1354
FauI	CCCGC	1 cut(s)	935
FauNDI	CATATG	2 cut(s)	432, 1510
FbaI	TGATCA	1 cut(s)	1549
FblI	GTMKAC	1 cut(s)	1464
Fnu4HI	GCNGC	8 cut(s)	141, 144, 147, 196, 199, 289, 447, 474
FokI	GGATG	2 cut(s)	1201, 1472
FriOI	GRGCYC	1 cut(s)	658
Fsp4HI	GCNGC	8 cut(s)	141, 144, 147, 196, 199, 289, 447, 474
FspBI	CTAG	2 cut(s)	728, 1068
GlaI	GCGC	5 cut(s)	139, 166, 233, 450, 722
GluI	GCNGC	8 cut(s)	141, 144, 147, 196, 199, 289, 447, 474
GsaI	CCCAGC	1 cut(s)	720
HaeII	RGCGCY	4 cut(s)	168, 235, 452, 724
HaeIII	GGCC	8 cut(s)	149, 155, 182, 198, 296, 476, 494, 689
HapII	CCGG	3 cut(s)	162, 598, 632
HgaI	GACGC	2 cut(s)	202, 230
HhaI	GCGC	5 cut(s)	140, 167, 234, 451, 723
Hin1I	GRCGYC	6 cut(s)	129, 165, 213, 222, 812, 1584
Hin1II	CATG	8 cut(s)	118, 278, 286, 310, 359, 1018, 1102, 1358
Hin6I	GCGC	5 cut(s)	138, 165, 232, 449, 721
HinP1I	GCGC	5 cut(s)	138, 165, 232, 449, 721
HinfI	GANTC	4 cut(s)	5, 242, 373, 1417
HpaII	CCGG	3 cut(s)	162, 598, 632
HphI	GGTGA	5 cut(s)	208, 229, 407, 947, 1567
Hpy166II	GTNNAC	3 cut(s)	133, 639, 1465
Hpy188I	TCNGA	9 cut(s)	378, 817, 868, 961, 1023, 1207, 1346, 1505, 1528
Hpy188III	TCNNGA	8 cut(s)	356, 517, 610, 1133, 1271, 1355, 1409, 1421
Hpy8I	GTNNAC	3 cut(s)	133, 639, 1465
Hpy99I	CGWCG	3 cut(s)	131, 224, 230
HpyAV	CCTTC	3 cut(s)	262, 353, 1362
HpyCH4III	ACNGT	3 cut(s)	39, 395, 1169
HpyCH4IV	ACGT	4 cut(s)	129, 426, 709, 812
HpyF10VI	GCNNNNNNNGC	6 cut(s)	23, 146, 152, 554, 574, 1259
HpyF3I	CTNAG	4 cut(s)	75, 369, 1020, 1430
HpySE526I	ACGT	4 cut(s)	129, 426, 709, 812
Hsp92I	GRCGYC	6 cut(s)	129, 165, 213, 222, 812, 1584
Hsp92II	CATG	8 cut(s)	118, 278, 286, 310, 359, 1018, 1102, 1358
HspAI	GCGC	5 cut(s)	138, 165, 232, 449, 721
KasI	GGCGCC	1 cut(s)	164
Ksp22I	TGATCA	1 cut(s)	1549
KspI	CCGCGG	1 cut(s)	147
Kzo9I	GATC	7 cut(s)	462, 508, 606, 799, 1036, 1505, 1549
LmnI	GCTCC	4 cut(s)	489, 498, 841, 1153
Lsp1109I	GCAGC	1 cut(s)	300
MabI	ACCWGGT	1 cut(s)	1083
MaeI	CTAG	2 cut(s)	728, 1068
MaeII	ACGT	4 cut(s)	129, 426, 709, 812
MaeIII	GTNAC	3 cut(s)	39, 214, 1087
MalI	GATC	7 cut(s)	464, 510, 608, 801, 1038, 1507, 1551
MboI	GATC	7 cut(s)	462, 508, 606, 799, 1036, 1505, 1549
MflI	RGATCY	1 cut(s)	1036
MhlI	GDGCHC	1 cut(s)	658
MluCI	AATT	6 cut(s)	384, 748, 887, 901, 1179, 1499
Mly113I	GGCGCC	1 cut(s)	165
MlyI	GAGTC	3 cut(s)	14, 251, 1426
MmeI	TCCRAC	1 cut(s)	1345
MroXI	GAANNNNTTC	1 cut(s)	1050
MseI	TTAA	4 cut(s)	326, 573, 1230, 1494
MslI	CAYNNNNRTG	2 cut(s)	563, 1272
MspA1I	CMGCKG	1 cut(s)	146
MspI	CCGG	3 cut(s)	162, 598, 632
MspR9I	CCNGG	4 cut(s)	152, 496, 633, 1085
Mva1269I	GAATGC	2 cut(s)	351, 1492
MvaI	CCWGG	3 cut(s)	152, 496, 1085
MvnI	CGCG	1 cut(s)	146
MwoI	GCNNNNNNNGC	6 cut(s)	23, 146, 152, 554, 574, 1259
NarI	GGCGCC	1 cut(s)	165
NciI	CCSGG	1 cut(s)	633
NdeI	CATATG	2 cut(s)	432, 1510
NdeII	GATC	7 cut(s)	462, 508, 606, 799, 1036, 1505, 1549
NlaIII	CATG	8 cut(s)	118, 278, 286, 310, 359, 1018, 1102, 1358
NlaIV	GGNNCC	4 cut(s)	166, 500, 1155, 1516
NmuCI	GTSAC	2 cut(s)	39, 214
NotI	GCGGCCGC	1 cut(s)	196
PagI	TCATGA	2 cut(s)	355, 1354
PcsI	WCGNNNNNNNCGW	2 cut(s)	14, 210
PctI	GAATGC	2 cut(s)	351, 1492
PdmI	GAANNNNTTC	1 cut(s)	1050
PfeI	GAWTC	1 cut(s)	373
PflFI	GACNNNGTC	1 cut(s)	224
PflMI	CCANNNNNTGG	1 cut(s)	189
PkrI	GCNGC	8 cut(s)	142, 145, 148, 197, 200, 290, 448, 475
Ple19I	CGATCG	1 cut(s)	802
PleI	GAGTC	3 cut(s)	13, 250, 1425
PluTI	GGCGCC	1 cut(s)	168
PpsI	GAGTC	3 cut(s)	13, 250, 1425
Psp6I	CCWGG	3 cut(s)	150, 494, 1083
PspFI	CCCAGC	1 cut(s)	716
PspGI	CCWGG	3 cut(s)	150, 494, 1083
PspN4I	GGNNCC	4 cut(s)	166, 500, 1155, 1516
PspPI	GGNCC	4 cut(s)	148, 154, 295, 595
PstI	CTGCAG	1 cut(s)	585
PstNI	CAGNNNCTG	1 cut(s)	1379
PsuI	RGATCY	1 cut(s)	1036
PsyI	GACNNNGTC	1 cut(s)	224
PvuI	CGATCG	1 cut(s)	802
RsaI	GTAC	2 cut(s)	638, 1338
RsaNI	GTAC	2 cut(s)	637, 1337
RseI	CAYNNNNRTG	2 cut(s)	563, 1272
SacII	CCGCGG	1 cut(s)	147
SaqAI	TTAA	4 cut(s)	326, 573, 1230, 1494
SatI	GCNGC	8 cut(s)	141, 144, 147, 196, 199, 289, 447, 474
Sau3AI	GATC	7 cut(s)	462, 508, 606, 799, 1036, 1505, 1549
Sau96I	GGNCC	4 cut(s)	148, 154, 295, 595
SchI	GAGTC	3 cut(s)	14, 251, 1426
ScrFI	CCNGG	4 cut(s)	152, 496, 633, 1085
SduI	GDGCHC	1 cut(s)	658
SexAI	ACCWGGT	1 cut(s)	1083
SfcI	CTRYAG	1 cut(s)	581
SfoI	GGCGCC	1 cut(s)	166
Sfr303I	CCGCGG	1 cut(s)	147
SgrBI	CCGCGG	1 cut(s)	147
SinI	GGWCC	1 cut(s)	595
SmiMI	CAYNNNNRTG	2 cut(s)	563, 1272
Sse9I	AATT	6 cut(s)	384, 748, 887, 901, 1179, 1499
SsiI	CCGC	8 cut(s)	141, 144, 146, 195, 199, 446, 473, 928
SspDI	GGCGCC	1 cut(s)	164
SspMI	CTAG	2 cut(s)	728, 1068
StyD4I	CCNGG	4 cut(s)	150, 494, 631, 1083
StyI	CCWWGG	2 cut(s)	174, 931
TaaI	ACNGT	3 cut(s)	39, 395, 1169
TaiI	ACGT	4 cut(s)	132, 429, 712, 815
TaqI	TCGA	8 cut(s)	60, 126, 204, 228, 255, 798, 1272, 1422
TaqII	GACCGA	1 cut(s)	885
TasI	AATT	6 cut(s)	384, 748, 887, 901, 1179, 1499
TauI	GCSGC	7 cut(s)	143, 146, 149, 198, 201, 449, 476
TfiI	GAWTC	1 cut(s)	373
Tru1I	TTAA	4 cut(s)	326, 573, 1230, 1494
Tru9I	TTAA	4 cut(s)	326, 573, 1230, 1494
TscAI	CASTG	8 cut(s)	42, 140, 337, 790, 838, 1174, 1452, 1559
TseFI	GTSAC	2 cut(s)	39, 214
TseI	GCWGC	1 cut(s)	288
Tsp45I	GTSAC	2 cut(s)	39, 214
TspDTI	ATGAA	5 cut(s)	344, 372, 449, 579, 908
TspRI	CASTG	8 cut(s)	42, 140, 337, 790, 838, 1174, 1452, 1559
Tth111I	GACNNNGTC	1 cut(s)	224
Van91I	CCANNNNNTGG	1 cut(s)	189
VpaK11BI	GGWCC	1 cut(s)	595
XapI	RAATTY	3 cut(s)	748, 887, 1499
XmiI	GTMKAC	1 cut(s)	1464
XmnI	GAANNNNTTC	1 cut(s)	1050
XspI	CTAG	2 cut(s)	728, 1068
ZraI	GACGTC	2 cut(s)	130, 813

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.