RchiOBHm_Chr7g0237651

Transport inhibitor response

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0011358
Physical Location & Seq
Forward (+)
62803985 .. 62807742
3758 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21299

Sequence Viewer

Length: 1869 bp
ATGGGAGAGGACCCTTCATCGTCCCAAATGTCCGAAGACGACGACCGATCTCCGCCGTTGGATCCCATCTCCAACAAAGCCCGCAACTGCTCCGGGTCGGGTTGCCCCAGCAGCAGCAGCAGCGGCGGCGGCGGCACCGACTACATCATCCCTTACCCGGACCAAGTCCTCGAGAACGTTCTAGAAAACGTGCTCTGCTTCCTCACCGCCCGCCAAGACCGCAACGCCGCCTCATTGGTCTGCAAGTCATGGTACCGCGCCGAGGCCCTCACCCGATCCGAGCTCTTCATCGGCAACTGCTACGCCGTATCGCCACGCCGGGCCACGGCCCGGTTCAGCCGGGTCCGGGCCGTGTCCATCAAGGGGAAGCCCAGGTTCGCCGACTTCAACCTCATGCCGGCCCATTGGGGCGCCCACTTCGGGCCCTGGGTCTCCGCCATGGCCAAGGCTTACCCTTGGCTCGAGAAAGTCTATCTCAAGCGCATGTCCGTCACCGACGACGATCTGGCTCTGCTGGCCGAGGCGTTCCCCGGGTTCAAGGACCTCGTTCTGGTTTGCTGTGATGGATTTGGGACCAGTGGCCTCGCTGTGGTCGCCAGTAAGTGCAGACAGCTTAGGGTGCTTGATTTGATTGATTCTGAGGTTATGGACGACGATGTGGATTGGATATGTTGTTTTCCTGAGAGCCAAACCTGTCTGGAGTCTCTGATGTTTGATTGCGTAGAATGCCACGTAAATTTCGAGGCATTGGAGAGGCTGGTGATTAGGTCAACTTCCTTGAAGAAACTTAGGTTGAACCGCTATGTTTCAATTGGGCAGCTACACCGCTTGATGGTTCGAGCTCCACAGCTCACTCACCTAGGAACGGGCTCATTCAGTTCATCGGAGGGCAATGCTCAGGGGGATCAAGAACTGGATTGTGTCTCTGCTTTTGCTGCTTGCAAATCCATAGTCTGTCTATCTGGGTTCAAGGAGATATTTGTGGATCAGTTGCCTGCAATTTACCCCGTCTGTGCTAATCTGACCAATCTGAATTTCAGCTATGCAAACATCAGTGCAGAACAACTTAAACCAGTCATACGAAACTGCCACAAGCTCCAGACTTTCTGGGTACTTGATTCAGTATGTGATGAAGGCCTTAAGGCAGTGGCTGCAACTTGCAAGGAACTGCGTGAACTTCGGGTCTTCCCAGTCGACCCTCGTGAAGATATTGAGGGTCCTGTGTCTGAGATTGGTTTCCAAGCCATTTCTGAGGGTTGTAGGAAACTGCAATCTATATTATATTTCTGCCAACGTATGACGAATGAAGCTGTGAAAGCCATGTCAAAGAACTGCCCAGATCTTGTGGTGTTTCGTCTGTGTATAATGGGGCGCCACCGGCCTGACCATGTTACTGGTGAGTCCATGGATGAAGGTTTTGGAGCAATAGTTATGAATTGTAAGAAGCTCACCCGCCTCGCTGTGTCTGGTTTACTGACTGATCAAGCTTTCAGTTACATTGGGCAATATGGAAAATTGGTTCGAACTCTCTCAGTTGCCTTTGCTGGTGACAGTGACATGGCTCTACAATATTTGCTTGAGGGCTGCCCTAAATTGCAGAAGCTTGAAATCCGGGACAGTCCATTTGGGGATTCAGCATTACGCTCTGGCTTGCATCACTATTACAACATGAGATTCCTTTGGATGTCATCATGCTTGTTAACTCCGCAAGGTTGTCGAGATATTGCTCGAGCACTGCCCCGCCTGGTTGTGGAAGTGATCAACAGTGATCAACAGGTGGAAACGGGTGAATATGTTGATATACTATACATGTACCGATCCCTTGATGGGCAAAGGGATGATATTCCAAAGTTTGTTGATATCCTGTAG

Protein Analysis

622

Amino Acids

69.21

Weight (kDa)

5.63

Isoelectric Point (pI)

46.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box_5 PF18511 54 - 93 7.4e-19 F-box
Transp_inhibit PF18791 114 - 159 1.5e-23 Transport inhibitor response 1 protein domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011358)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G24390 AT4G24390 AT5G49980
fragaria_vesca FvH4_5g35920 FvH4_5g35920
malus_domestica MD08G1192000.v1.1 MD15G1380700.v1.1
prunus_persica Prupe.1G526900_v2.0.a1
pyrus_communis pycom08g16580 pycom15g34120
rosa_chinensis RchiOBHm_Chr7g0237651
rosa_laevigata RLG00000000978
rosa_multiflora Rmu_sc0007826.1_g000009
rosa_roxburghii Rroxscaffold_3G00223900
rosa_rugosa Rorug07G0306000
rosa_samantha Rh7AG462700 Rh7BG432700 Rh7CG479500 Rh7DG448500
rosa_wichuraiana Rw7G038280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 252
AccB1I GGYRCC 4 cut(s) 134, 252, 410, 1371
AccI GTMKAC 1 cut(s) 1194
AccII CGCG 1 cut(s) 258
AclI AACGTT 1 cut(s) 177
AclWI GGATC 6 cut(s) 56, 69, 270, 912, 993, 1812
AcoI YGGCCR 2 cut(s) 441, 516
AcsI RAATTY 2 cut(s) 736, 1033
AcyI GRCGYC 2 cut(s) 411, 1372
AfaI GTAC 3 cut(s) 254, 1113, 1814
AflII CTTAAG 1 cut(s) 1139
AflIII ACRYGT 1 cut(s) 1809
AgsI TTSAA 7 cut(s) 388, 538, 781, 796, 810, 970, 1607
AjnI CCWGG 3 cut(s) 371, 425, 1743
AjuI GAANNNNNNNTTGG 2 cut(s) 1019, 1051
AloI GAACNNNNNNTCC 2 cut(s) 1503, 1535
Alw21I GWGCWC 4 cut(s) 195, 285, 844, 1735
Alw26I GTCTC 3 cut(s) 436, 708, 928
AlwI GGATC 6 cut(s) 56, 69, 270, 912, 993, 1812
AlwNI CAGNNNCTG 1 cut(s) 1151
Ama87I CYCGRG 4 cut(s) 170, 461, 530, 1728
ApaI GGGCCC 1 cut(s) 426
ApeKI GCWGC 8 cut(s) 111, 114, 117, 120, 817, 935, 1151, 1584
ApoI RAATTY 2 cut(s) 736, 1033
ArsI GACNNNNNNTTYG 4 cut(s) 936, 968, 1607, 1639
Asp718I GGTACC 1 cut(s) 252
AspA2I CCTAGG 1 cut(s) 859
AspLEI GCGC 4 cut(s) 260, 413, 483, 1374
AsuC2I CCSGG 9 cut(s) 94, 158, 320, 331, 341, 347, 531, 532, 1613
AsuHPI GGTGA 9 cut(s) 196, 262, 484, 772, 848, 1409, 1441, 1559, 1799
AsuII TTCGAA 1 cut(s) 1522
AvaI CYCGRG 4 cut(s) 170, 461, 530, 1728
AvaII GGWCC 6 cut(s) 10, 160, 343, 541, 573, 1217
AvrII CCTAGG 1 cut(s) 859
BaeGI GKGCMC 1 cut(s) 426
BalI TGGCCA 1 cut(s) 443
BamHI GGATCC 1 cut(s) 61
BanI GGYRCC 4 cut(s) 134, 252, 410, 1371
BanII GRGCYC 4 cut(s) 285, 426, 844, 872
BauI CACGAG 1 cut(s) 1200
BbsI GAAGAC 2 cut(s) 42, 1177
Bbv12I GWGCWC 4 cut(s) 195, 285, 844, 1735
BbvI GCAGC 8 cut(s) 123, 126, 129, 132, 829, 922, 1138, 1571
BccI CCATC 5 cut(s) 74, 365, 557, 826, 1820
BceAI ACGGC 4 cut(s) 40, 290, 335, 342
BcgI CGANNNNNNTGC 2 cut(s) 1697, 1731
BciT130I CCWGG 3 cut(s) 373, 427, 1745
BclI TGATCA 3 cut(s) 1480, 1758, 1768
BcnI CCSGG 9 cut(s) 94, 158, 320, 331, 341, 347, 531, 532, 1613
BcoDI GTCTC 3 cut(s) 436, 708, 928
BfaI CTAG 2 cut(s) 182, 860
BfmI CTRYAG 1 cut(s) 1865
BfoI RGCGCY 2 cut(s) 414, 1375
BfrI CTTAAG 1 cut(s) 1139
BglII AGATCT 1 cut(s) 1339
BlnI CCTAGG 1 cut(s) 859
Bme18I GGWCC 6 cut(s) 10, 160, 343, 541, 573, 1217
BmeT110I CYCGRG 4 cut(s) 170, 461, 530, 1728
BmrI ACTGGG 1 cut(s) 1184
BmsI GCATC 1 cut(s) 1663
BmuI ACTGGG 1 cut(s) 1184
BpiI GAAGAC 2 cut(s) 42, 1177
BpmI CTGGAG 2 cut(s) 719, 1082
Bpu10I CCTNAGC 2 cut(s) 614, 897
Bpu14I TTCGAA 1 cut(s) 1522
BpuEI CTTGAG 2 cut(s) 461, 1598
BpuMI CCSGG 9 cut(s) 94, 158, 320, 331, 341, 347, 531, 532, 1613
BsaAI YACGTR 1 cut(s) 733
BsaHI GRCGYC 2 cut(s) 411, 1372
BsaI GGTCTC 1 cut(s) 436
BsaXI ACNNNNNCTCC 2 cut(s) 1413, 1443
Bse118I RCCGGY 2 cut(s) 397, 1377
Bse1I ACTGG 6 cut(s) 576, 597, 918, 1073, 1190, 1399
Bse3DI GCAATG 1 cut(s) 898
BseBI CCWGG 3 cut(s) 373, 427, 1745
BseGI GGATG 4 cut(s) 147, 1414, 1689, 1843
BseMI GCAATG 1 cut(s) 898
BseMII CTCAG 6 cut(s) 630, 672, 911, 1218, 1242, 1545
BseNI ACTGG 6 cut(s) 576, 597, 918, 1073, 1190, 1399
BseSI GKGCMC 1 cut(s) 426
BseXI GCAGC 8 cut(s) 123, 126, 129, 132, 829, 922, 1138, 1571
BseYI CCCAGC 1 cut(s) 107
BsgI GTGCAG 2 cut(s) 625, 1077
Bsh1236I CGCG 1 cut(s) 258
Bsh1285I CGRYCG 1 cut(s) 46
BshNI GGYRCC 4 cut(s) 134, 252, 410, 1371
BsiEI CGRYCG 1 cut(s) 46
BsiHKAI GWGCWC 4 cut(s) 195, 285, 844, 1735
BsiHKCI CYCGRG 4 cut(s) 170, 461, 530, 1728
BslFI GGGAC 3 cut(s) 7, 586, 1628
BsmAI GTCTC 3 cut(s) 436, 708, 928
BsmFI GGGAC 3 cut(s) 7, 586, 1628
BsmI GAATGC 1 cut(s) 731
Bso31I GGTCTC 1 cut(s) 436
BsoBI CYCGRG 4 cut(s) 170, 461, 530, 1728
Bsp119I TTCGAA 1 cut(s) 1522
Bsp120I GGGCCC 1 cut(s) 422
Bsp1286I GDGCHC 6 cut(s) 195, 285, 426, 844, 872, 1735
Bsp19I CCATGG 2 cut(s) 438, 1404
BspCNI CTCAG 6 cut(s) 631, 673, 910, 1219, 1243, 1544
BspFNI CGCG 1 cut(s) 258
BspPI GGATC 6 cut(s) 56, 69, 270, 912, 993, 1812
BspQI GCTCTTC 1 cut(s) 290
BspT104I TTCGAA 1 cut(s) 1522
BspT107I GGYRCC 4 cut(s) 134, 252, 410, 1371
BspTI CTTAAG 1 cut(s) 1139
BspTNI GGTCTC 1 cut(s) 436
BsrDI GCAATG 1 cut(s) 898
BsrFI RCCGGY 2 cut(s) 397, 1377
BsrI ACTGG 6 cut(s) 576, 597, 918, 1073, 1190, 1399
BssAI RCCGGY 2 cut(s) 397, 1377
BssNI GRCGYC 2 cut(s) 411, 1372
BssSI CACGAG 1 cut(s) 1200
BssT1I CCWWGG 5 cut(s) 438, 444, 455, 859, 1404
Bst2BI CACGAG 1 cut(s) 1200
Bst2UI CCWGG 3 cut(s) 373, 427, 1745
Bst4CI ACNGT 3 cut(s) 1553, 1619, 1766
Bst6I CTCTTC 1 cut(s) 290
BstACI GRCGYC 2 cut(s) 411, 1372
BstAFI CTTAAG 1 cut(s) 1139
BstAPI GCANNNNNTGC 1 cut(s) 1151
BstBAI YACGTR 1 cut(s) 733
BstBI TTCGAA 1 cut(s) 1522
BstC8I GCNNGC 7 cut(s) 82, 211, 399, 516, 940, 996, 1652
BstDEI CTNAG 8 cut(s) 614, 639, 681, 788, 897, 1227, 1251, 1531
BstDSI CCRYGG 3 cut(s) 324, 438, 1404
BstF5I GGATG 4 cut(s) 147, 1414, 1689, 1843
BstFNI CGCG 1 cut(s) 258
BstH2I RGCGCY 2 cut(s) 414, 1375
BstHHI GCGC 4 cut(s) 260, 413, 483, 1374
BstMAI GTCTC 3 cut(s) 436, 708, 928
BstMCI CGRYCG 1 cut(s) 46
BstNI CCWGG 3 cut(s) 373, 427, 1745
BstNSI RCATGY 2 cut(s) 487, 1813
BstSFI CTRYAG 1 cut(s) 1865
BstSLI GKGCMC 1 cut(s) 426
BstUI CGCG 1 cut(s) 258
BstV1I GCAGC 8 cut(s) 123, 126, 129, 132, 829, 922, 1138, 1571
BstV2I GAAGAC 2 cut(s) 42, 1177
BstX2I RGATCY 2 cut(s) 61, 1339
BstXI CCANNNNNNTGG 1 cut(s) 1394
BstYI RGATCY 2 cut(s) 61, 1339
BtgI CCRYGG 3 cut(s) 324, 438, 1404
BtsCI GGATG 4 cut(s) 147, 1414, 1689, 1843
BtsI GCAGTG 2 cut(s) 1152, 1733
BtsIMutI CAGTG 6 cut(s) 583, 1060, 1152, 1558, 1733, 1771
Cac8I GCNNGC 7 cut(s) 82, 211, 399, 516, 940, 996, 1652
CaiI CAGNNNCTG 1 cut(s) 1151
CfoI GCGC 4 cut(s) 260, 413, 483, 1374
Cfr10I RCCGGY 2 cut(s) 397, 1377
Cfr9I CCCGGG 1 cut(s) 530
Csp6I GTAC 3 cut(s) 253, 1112, 1813
CviQI GTAC 3 cut(s) 253, 1112, 1813
DdeI CTNAG 8 cut(s) 614, 639, 681, 788, 897, 1227, 1251, 1531
DinI GGCGCC 2 cut(s) 412, 1373
EaeI YGGCCR 2 cut(s) 441, 516
Eam1104I CTCTTC 1 cut(s) 290
EarI CTCTTC 1 cut(s) 290
EciI GGCGGA 2 cut(s) 42, 424
Ecl136II GAGCTC 2 cut(s) 283, 842
Eco130I CCWWGG 5 cut(s) 438, 444, 455, 859, 1404
Eco147I AGGCCT 1 cut(s) 1137
Eco24I GRGCYC 4 cut(s) 285, 426, 844, 872
Eco31I GGTCTC 1 cut(s) 436
Eco32I GATATC 1 cut(s) 1861
Eco47I GGWCC 6 cut(s) 10, 160, 343, 541, 573, 1217
Eco53kI GAGCTC 2 cut(s) 283, 842
Eco88I CYCGRG 4 cut(s) 170, 461, 530, 1728
EcoICRI GAGCTC 2 cut(s) 283, 842
EcoO109I RGGNCCY 5 cut(s) 10, 265, 423, 541, 1217
EcoRII CCWGG 3 cut(s) 371, 425, 1743
EcoRV GATATC 1 cut(s) 1861
EcoT14I CCWWGG 5 cut(s) 438, 444, 455, 859, 1404
EcoT38I GRGCYC 4 cut(s) 285, 426, 844, 872
EgeI GGCGCC 2 cut(s) 412, 1373
EheI GGCGCC 2 cut(s) 412, 1373
ErhI CCWWGG 5 cut(s) 438, 444, 455, 859, 1404
FaqI GGGAC 3 cut(s) 7, 586, 1628
FauI CCCGC 4 cut(s) 89, 218, 1460, 1748
FbaI TGATCA 3 cut(s) 1480, 1758, 1768
FblI GTMKAC 1 cut(s) 1194
FokI GGATG 4 cut(s) 134, 1421, 1696, 1850
FriOI GRGCYC 4 cut(s) 285, 426, 844, 872
FspBI CTAG 2 cut(s) 182, 860
GlaI GCGC 4 cut(s) 259, 412, 482, 1373
GsaI CCCAGC 1 cut(s) 111
GsuI CTGGAG 2 cut(s) 719, 1082
HaeII RGCGCY 2 cut(s) 414, 1375
HhaI GCGC 4 cut(s) 260, 413, 483, 1374
Hin1I GRCGYC 2 cut(s) 411, 1372
Hin6I GCGC 4 cut(s) 258, 411, 481, 1372
HinP1I GCGC 4 cut(s) 258, 411, 481, 1372
HincII GTYRAC 3 cut(s) 771, 1195, 1701
HindII GTYRAC 3 cut(s) 771, 1195, 1701
HindIII AAGCTT 2 cut(s) 1485, 1601
HinfI GANTC 6 cut(s) 635, 701, 1118, 1400, 1631, 1674
HpaI GTTAAC 1 cut(s) 1701
HphI GGTGA 9 cut(s) 196, 262, 484, 772, 848, 1409, 1441, 1559, 1799
Hpy166II GTNNAC 5 cut(s) 771, 1175, 1195, 1472, 1701
Hpy188I TCNGA 9 cut(s) 34, 280, 640, 708, 886, 1023, 1032, 1228, 1252
Hpy188III TCNNGA 9 cut(s) 172, 182, 463, 680, 698, 908, 1099, 1202, 1718
Hpy8I GTNNAC 5 cut(s) 771, 1175, 1195, 1472, 1701
Hpy99I CGWCG 4 cut(s) 44, 500, 503, 656
HpyAV CCTTC 3 cut(s) 24, 1127, 1406
HpyCH4III ACNGT 3 cut(s) 1553, 1619, 1766
HpyCH4IV ACGT 4 cut(s) 177, 189, 732, 1294
HpyF3I CTNAG 8 cut(s) 614, 639, 681, 788, 897, 1227, 1251, 1531
HpySE526I ACGT 4 cut(s) 177, 189, 732, 1294
Hsp92I GRCGYC 2 cut(s) 411, 1372
HspAI GCGC 4 cut(s) 258, 411, 481, 1372
KasI GGCGCC 2 cut(s) 410, 1371
KpnI GGTACC 1 cut(s) 256
KroI GCCGGC 1 cut(s) 397
KroNI GCCGGC 1 cut(s) 399
Ksp22I TGATCA 3 cut(s) 1480, 1758, 1768
KspAI GTTAAC 1 cut(s) 1701
LguI GCTCTTC 1 cut(s) 290
LmnI GCTCC 4 cut(s) 95, 847, 1101, 1421
Lsp1109I GCAGC 8 cut(s) 123, 126, 129, 132, 829, 922, 1138, 1571
LweI GCATC 1 cut(s) 1663
MaeI CTAG 2 cut(s) 182, 860
MaeII ACGT 4 cut(s) 177, 189, 732, 1294
MaeIII GTNAC 5 cut(s) 490, 1390, 1493, 1547, 1553
MboII GAAGA 5 cut(s) 47, 277, 793, 1177, 1217
MfeI CAATTG 1 cut(s) 810
MflI RGATCY 2 cut(s) 61, 1339
MhlI GDGCHC 6 cut(s) 195, 285, 426, 844, 872, 1735
MlsI TGGCCA 1 cut(s) 443
MluCI AATT 7 cut(s) 736, 810, 999, 1033, 1435, 1514, 1592
MluNI TGGCCA 1 cut(s) 443
Mly113I GGCGCC 2 cut(s) 411, 1372
MlyI GAGTC 2 cut(s) 710, 1409
MmeI TCCRAC 2 cut(s) 39, 96
Mox20I TGGCCA 1 cut(s) 443
MroNI GCCGGC 1 cut(s) 397
MscI TGGCCA 1 cut(s) 443
MseI TTAA 3 cut(s) 1068, 1140, 1700
Msp20I TGGCCA 1 cut(s) 443
MspA1I CMGCKG 1 cut(s) 123
MspCI CTTAAG 1 cut(s) 1139
MunI CAATTG 1 cut(s) 810
Mva1269I GAATGC 1 cut(s) 731
MvaI CCWGG 3 cut(s) 373, 427, 1745
MvnI CGCG 1 cut(s) 258
NaeI GCCGGC 1 cut(s) 399
NarI GGCGCC 2 cut(s) 411, 1372
NciI CCSGG 9 cut(s) 94, 158, 320, 331, 341, 347, 531, 532, 1613
NcoI CCATGG 2 cut(s) 438, 1404
NgoMIV GCCGGC 1 cut(s) 397
NmeAIII GCCGAG 2 cut(s) 286, 544
NmuCI GTSAC 3 cut(s) 490, 1547, 1553
NspI RCATGY 2 cut(s) 487, 1813
NspV TTCGAA 1 cut(s) 1522
PaeR7I CTCGAG 3 cut(s) 170, 461, 1728
PasI CCCWGGG 1 cut(s) 426
PceI AGGCCT 1 cut(s) 1137
PciI ACATGT 1 cut(s) 1809
PciSI GCTCTTC 1 cut(s) 290
PcsI WCGNNNNNNNCGW 1 cut(s) 738
PctI GAATGC 1 cut(s) 731
PdiI GCCGGC 1 cut(s) 399
PfeI GAWTC 4 cut(s) 635, 1118, 1631, 1674
PflFI GACNNNGTC 1 cut(s) 164
PfoI TCCNGGA 1 cut(s) 1611
PleI GAGTC 2 cut(s) 709, 1408
PluTI GGCGCC 2 cut(s) 414, 1375
PpsI GAGTC 2 cut(s) 709, 1408
Ppu21I YACGTR 1 cut(s) 733
PpuMI RGGWCCY 3 cut(s) 10, 541, 1217
PscI ACATGT 1 cut(s) 1809
Psp124BI GAGCTC 2 cut(s) 285, 844
Psp1406I AACGTT 1 cut(s) 177
Psp5II RGGWCCY 3 cut(s) 10, 541, 1217
Psp6I CCWGG 3 cut(s) 371, 425, 1743
PspFI CCCAGC 1 cut(s) 107
PspGI CCWGG 3 cut(s) 371, 425, 1743
PspOMI GGGCCC 1 cut(s) 422
PspPPI RGGWCCY 3 cut(s) 10, 541, 1217
PspXI VCTCGAGB 1 cut(s) 1728
PstNI CAGNNNCTG 1 cut(s) 1151
PsuI RGATCY 2 cut(s) 61, 1339
PsyI GACNNNGTC 1 cut(s) 164
RsaI GTAC 3 cut(s) 254, 1113, 1814
RsaNI GTAC 3 cut(s) 253, 1112, 1813
SacI GAGCTC 2 cut(s) 285, 844
SalI GTCGAC 1 cut(s) 1193
SapI GCTCTTC 1 cut(s) 290
SaqAI TTAA 3 cut(s) 1068, 1140, 1700
SchI GAGTC 2 cut(s) 710, 1409
SduI GDGCHC 6 cut(s) 195, 285, 426, 844, 872, 1735
SfaNI GCATC 1 cut(s) 1663
SfcI CTRYAG 1 cut(s) 1865
SfoI GGCGCC 2 cut(s) 412, 1373
Sfr274I CTCGAG 3 cut(s) 170, 461, 1728
SfuI TTCGAA 1 cut(s) 1522
SinI GGWCC 6 cut(s) 10, 160, 343, 541, 573, 1217
SlaI CTCGAG 3 cut(s) 170, 461, 1728
SmaI CCCGGG 1 cut(s) 532
SmlI CTYRAG 6 cut(s) 170, 461, 476, 1139, 1577, 1728
SmoI CTYRAG 6 cut(s) 170, 461, 476, 1139, 1577, 1728
Sse9I AATT 7 cut(s) 736, 810, 999, 1033, 1435, 1514, 1592
SseBI AGGCCT 1 cut(s) 1137
SspDI GGCGCC 2 cut(s) 410, 1371
SspI AATATT 1 cut(s) 1571
SspMI CTAG 2 cut(s) 182, 860
SstI GAGCTC 2 cut(s) 285, 844
StuI AGGCCT 1 cut(s) 1137
StyI CCWWGG 5 cut(s) 438, 444, 455, 859, 1404
TaaI ACNGT 3 cut(s) 1553, 1619, 1766
TaiI ACGT 4 cut(s) 180, 192, 735, 1297
TaqI TCGA 8 cut(s) 171, 462, 741, 838, 1194, 1522, 1717, 1729
TaqII GACCGA 1 cut(s) 60
TasI AATT 7 cut(s) 736, 810, 999, 1033, 1435, 1514, 1592
TauI GCSGC 5 cut(s) 126, 129, 132, 135, 230
TfiI GAWTC 4 cut(s) 635, 1118, 1631, 1674
Tru1I TTAA 3 cut(s) 1068, 1140, 1700
Tru9I TTAA 3 cut(s) 1068, 1140, 1700
TscAI CASTG 6 cut(s) 583, 1060, 1152, 1558, 1740, 1771
TseFI GTSAC 3 cut(s) 490, 1547, 1553
TseI GCWGC 8 cut(s) 111, 114, 117, 120, 817, 935, 1151, 1584
Tsp45I GTSAC 3 cut(s) 490, 1547, 1553
TspDTI ATGAA 7 cut(s) 6, 277, 870, 1146, 1320, 1425, 1448
TspGWI ACGGA 1 cut(s) 478
TspMI CCCGGG 1 cut(s) 530
TspRI CASTG 6 cut(s) 583, 1060, 1152, 1558, 1740, 1771
Tth111I GACNNNGTC 1 cut(s) 164
Vha464I CTTAAG 1 cut(s) 1139
VpaK11BI GGWCC 6 cut(s) 10, 160, 343, 541, 573, 1217
XapI RAATTY 2 cut(s) 736, 1033
XbaI TCTAGA 1 cut(s) 181
XceI RCATGY 2 cut(s) 487, 1813
XhoI CTCGAG 3 cut(s) 170, 461, 1728
XmaI CCCGGG 1 cut(s) 530
XmaJI CCTAGG 1 cut(s) 859
XmiI GTMKAC 1 cut(s) 1194
XspI CTAG 2 cut(s) 182, 860
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.