Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0011358

Physical Location & Seq

Genomic Coordinates Reverse (-)

7028661 .. 7032161

Gene Structure 3501 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00223900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGGGAGAGGACCCTTCATCGTCCCAAATGTCCGAAGACGACGACCGATCTCCGCCGTTGGATCCCATCTCCTCCAACAAAGCCCGCAACTGCTCCGGGTCGGGTTGCCCCAGCAGCAGCAGCACCACCGACTACATCATCCCTTACCCGGACCAAGTCCTCGAGAACGTTCTAGAAAACGTGCTCTGCTTCCTCACCGCCCGCCAAGACCGCAACGCCGCCTCATTGGTCTGCAAGTCATGGTACCGCGCCGAGGCCCTCACCCGATCCGAGCTCTTCATCGGCAACTGCTACGCCGTCTCGCCCCTGCGGGCCACGGCCCGCTTCACCCGGGTCCGGGCCGTGTCCATCAAGGGGAAGCCCAGGTTCGCCGACTTTAACCTCATGCCGCCCCATTGGGGCGCCCACTTCGGGCCCTGGGTCTCCGTCATGGCCAAGGCTTACCCTCGGCTCGAGAAAGTCTATCTCAAGCGCATGTCCGTCACCAACGACGATCTGGCTCTGCTGGCCGAGTCGTTCCCCGAGTTCAAGGAGCTCGTTCTGGTTTGCTGTGATGGATTTGGGACCAGTGGCCTCGCTGTGGTCGCCAGTAAGTGCAGGCAGCTTAGGGTGCTTGATTTGATTGAATCTGAGGTTATTGACGACGATGTGGATTGGATATGTTGTTTTCCTGAGAGCCAAACCTGTCTGGAGTCTCTGATGTTTGATTGCGTAGAATGCCACGTAAATTTCGAGGCATTGGAGAGGCTGGTGATTAGGTCAACTTCCTTGAAGAAACTTAGGTTGAACCGCTATGTTTCAATTGGGCAGCTACACCGCTTGATGGTTCGAGCTCCACAGCTCACTCACCTAGGAACGGGCTCATTCAGTTCATCGGAGGGTAATGCTCAGGGGGATCAAGAACTGGATTGTGTCTCCGCTTTTGCTGCTTGCAAATCCATGGTCTGTCTATCTGGGTTCAAGGAGATATTTGTGGATCAGTTGCCTGCAATTTACCCCGTCTGTGCTAATCTGACCAATCTGAATTTCAGCTATGCAAATATCAGTGCAGAACAACTTAAACCAGTCATACGAAACTGCCACAAGCTCCAGACTTTCTGGGTACTCGATTCAGTATGTGATGAAGGCCTTAAGGCAGTGGCTGCAACTTGCAAGGAACTGCGTGAACTTCGGGTCTTCCCAGTCGACCCTCGTGAAGATATTGAGGGTCCTGTGTCTGAGATTGGTTTCCAAGCCATTTCTGAGGGTTGTAGGAAACTGCAATCTATATTATATTTCTGCCAACGTATGACAAATGAAGCCGTGAAAGCCATGTCAAAGAACTGCCCAGATCTTGTGGTGTTTCGTCTGTGTATAATGGGGCGCCACCGGCCTGACCATGTTACTGGTGAGTCCATGGATGAAGGTTTTGGAGCAATAGTTATGAATTGTAAGAAGCTCACCCGCCTGGCTGTGTCTGGTTTACTGACTGATCAAGCTTTCAGTTATATTGGGCAATATGGAAAATTGGTTCGAACTCTCTCAGTTGCCTTTGCTGGTGACAGTGACATGGCTCTACAATATGTGCTTGAGGGCTGCCCTAAATTGCAGAAGCTTGAAATCCGGGACAGCCCATTTGGGGATTCAGCATTACGCTCTGGCTTGCATCACTATTACAACATGAGATTCCTTTGGATGTCATCATGCTTGTTAACTCGGCAAGGTTGTCGAGATATTGCTCAAGCACTGCCCCGCCTGGTTGTGGAAGTGATTAAGAGTGATCAACAACAGGTGGAAACGGGTGAATATGTTGATATACTATACATGTACCGATCCCTTGATGGGCAAAGGGATGATATTCCAAAGTTTGTTGATATCCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000822 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0007154 GO:0007165 GO:0008144 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010011 GO:0010033 GO:0019005 GO:0023052 GO:0031461 GO:0032870 GO:0032991 GO:0036094 GO:0042221 GO:0042562 GO:0043167 GO:0043168 GO:0043178 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_6

Protein Analysis

620

Amino Acids

69.35

Weight (kDa)

5.73

Isoelectric Point (pI)

46.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box_5	PF18511	51 - 90	7.4e-19	F-box
Transp_inhibit	PF18791	111 - 156	8.1e-23	Transport inhibitor response 1 protein domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011358)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24390 AT4G24390 AT5G49980
fragaria_vesca	FvH4_5g35920 FvH4_5g35920
malus_domestica	MD08G1192000.v1.1 MD15G1380700.v1.1
prunus_persica	Prupe.1G526900_v2.0.a1
pyrus_communis	pycom08g16580 pycom15g34120
rosa_chinensis	RchiOBHm_Chr7g0237651
rosa_laevigata	RLG00000000978
rosa_multiflora	Rmu_sc0007826.1_g000009
rosa_roxburghii	Rroxscaffold_3G00223900
rosa_rugosa	Rorug07G0306000
rosa_samantha	Rh7AG462700 Rh7BG432700 Rh7CG479500 Rh7DG448500
rosa_wichuraiana	Rw7G038280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	243
AccB1I	GGYRCC	3 cut(s)	243, 401, 1362
AccI	GTMKAC	1 cut(s)	1185
AccII	CGCG	1 cut(s)	249
AclI	AACGTT	1 cut(s)	168
AclWI	GGATC	6 cut(s)	56, 69, 261, 903, 984, 1806
AcoI	YGGCCR	2 cut(s)	432, 507
AcsI	RAATTY	2 cut(s)	727, 1024
AcyI	GRCGYC	2 cut(s)	402, 1363
AfaI	GTAC	3 cut(s)	245, 1104, 1808
AflII	CTTAAG	1 cut(s)	1130
AflIII	ACRYGT	1 cut(s)	1803
AgsI	TTSAA	7 cut(s)	529, 626, 772, 787, 801, 961, 1598
AjnI	CCWGG	4 cut(s)	362, 416, 1446, 1734
AjuI	GAANNNNNNNTTGG	2 cut(s)	1010, 1042
AloI	GAACNNNNNNTCC	2 cut(s)	1494, 1526
Alw21I	GWGCWC	4 cut(s)	186, 276, 537, 835
Alw26I	GTCTC	4 cut(s)	304, 427, 699, 919
AlwI	GGATC	6 cut(s)	56, 69, 261, 903, 984, 1806
AlwNI	CAGNNNCTG	1 cut(s)	1142
Ama87I	CYCGRG	4 cut(s)	161, 330, 452, 521
ApaI	GGGCCC	1 cut(s)	417
ApeKI	GCWGC	8 cut(s)	114, 117, 120, 601, 808, 926, 1142, 1575
ApoI	RAATTY	2 cut(s)	727, 1024
ArsI	GACNNNNNNTTYG	4 cut(s)	927, 959, 1598, 1630
Asp718I	GGTACC	1 cut(s)	243
AspA2I	CCTAGG	1 cut(s)	850
AspLEI	GCGC	4 cut(s)	251, 404, 474, 1365
AsuC2I	CCSGG	6 cut(s)	97, 149, 331, 332, 338, 1604
AsuII	TTCGAA	1 cut(s)	1513
AvaI	CYCGRG	4 cut(s)	161, 330, 452, 521
AvaII	GGWCC	5 cut(s)	10, 151, 334, 564, 1208
AvrII	CCTAGG	1 cut(s)	850
BaeGI	GKGCMC	1 cut(s)	417
BalI	TGGCCA	1 cut(s)	434
BamHI	GGATCC	1 cut(s)	61
BanI	GGYRCC	3 cut(s)	243, 401, 1362
BanII	GRGCYC	5 cut(s)	276, 417, 537, 835, 863
BauI	CACGAG	1 cut(s)	1191
BbsI	GAAGAC	2 cut(s)	42, 1168
Bbv12I	GWGCWC	4 cut(s)	186, 276, 537, 835
BbvI	GCAGC	8 cut(s)	126, 129, 132, 613, 820, 913, 1129, 1562
BccI	CCATC	5 cut(s)	74, 356, 548, 817, 1814
BceAI	ACGGC	5 cut(s)	40, 281, 326, 333, 1286
BcgI	CGANNNNNNTGC	2 cut(s)	1688, 1722
BciT130I	CCWGG	4 cut(s)	364, 418, 1448, 1736
BclI	TGATCA	2 cut(s)	1471, 1759
BcnI	CCSGG	6 cut(s)	97, 149, 331, 332, 338, 1604
BcoDI	GTCTC	4 cut(s)	304, 427, 699, 919
BfaI	CTAG	2 cut(s)	173, 851
BfmI	CTRYAG	1 cut(s)	1859
BfoI	RGCGCY	2 cut(s)	405, 1366
BfrI	CTTAAG	1 cut(s)	1130
BglII	AGATCT	1 cut(s)	1330
BlnI	CCTAGG	1 cut(s)	850
Bme18I	GGWCC	5 cut(s)	10, 151, 334, 564, 1208
BmeT110I	CYCGRG	4 cut(s)	161, 330, 452, 521
BmiI	GGNNCC	9 cut(s)	12, 63, 245, 335, 403, 415, 565, 1209, 1364
BmrI	ACTGGG	1 cut(s)	1175
BmsI	GCATC	1 cut(s)	1654
BmuI	ACTGGG	1 cut(s)	1175
BpiI	GAAGAC	2 cut(s)	42, 1168
BpmI	CTGGAG	2 cut(s)	710, 1073
Bpu10I	CCTNAGC	2 cut(s)	605, 888
Bpu14I	TTCGAA	1 cut(s)	1513
BpuEI	CTTGAG	3 cut(s)	452, 1589, 1704
BpuMI	CCSGG	6 cut(s)	97, 149, 331, 332, 338, 1604
BsaAI	YACGTR	1 cut(s)	724
BsaHI	GRCGYC	2 cut(s)	402, 1363
BsaI	GGTCTC	1 cut(s)	427
BsaXI	ACNNNNNCTCC	2 cut(s)	1404, 1434
Bse118I	RCCGGY	1 cut(s)	1368
Bse1I	ACTGG	6 cut(s)	567, 588, 909, 1064, 1181, 1390
BseBI	CCWGG	4 cut(s)	364, 418, 1448, 1736
BseGI	GGATG	4 cut(s)	138, 1405, 1680, 1837
BseMII	CTCAG	6 cut(s)	621, 663, 902, 1209, 1233, 1536
BseNI	ACTGG	6 cut(s)	567, 588, 909, 1064, 1181, 1390
BseRI	GAGGAG	1 cut(s)	61
BseSI	GKGCMC	1 cut(s)	417
BseXI	GCAGC	8 cut(s)	126, 129, 132, 613, 820, 913, 1129, 1562
BseYI	CCCAGC	1 cut(s)	110
BsgI	GTGCAG	2 cut(s)	616, 1068
Bsh1236I	CGCG	1 cut(s)	249
Bsh1285I	CGRYCG	1 cut(s)	46
BshNI	GGYRCC	3 cut(s)	243, 401, 1362
BsiEI	CGRYCG	1 cut(s)	46
BsiHKAI	GWGCWC	4 cut(s)	186, 276, 537, 835
BsiHKCI	CYCGRG	4 cut(s)	161, 330, 452, 521
BsiSI	CCGG	6 cut(s)	96, 149, 331, 337, 1369, 1603
BslFI	GGGAC	3 cut(s)	7, 577, 1619
BsmAI	GTCTC	4 cut(s)	304, 427, 699, 919
BsmBI	CGTCTC	1 cut(s)	304
BsmFI	GGGAC	3 cut(s)	7, 577, 1619
BsmI	GAATGC	1 cut(s)	722
Bso31I	GGTCTC	1 cut(s)	427
BsoBI	CYCGRG	4 cut(s)	161, 330, 452, 521
Bsp119I	TTCGAA	1 cut(s)	1513
Bsp120I	GGGCCC	1 cut(s)	413
Bsp1286I	GDGCHC	6 cut(s)	186, 276, 417, 537, 835, 863
Bsp19I	CCATGG	2 cut(s)	939, 1395
BspCNI	CTCAG	6 cut(s)	622, 664, 901, 1210, 1234, 1535
BspFNI	CGCG	1 cut(s)	249
BspLI	GGNNCC	9 cut(s)	12, 63, 245, 335, 403, 415, 565, 1209, 1364
BspPI	GGATC	6 cut(s)	56, 69, 261, 903, 984, 1806
BspQI	GCTCTTC	1 cut(s)	281
BspT104I	TTCGAA	1 cut(s)	1513
BspT107I	GGYRCC	3 cut(s)	243, 401, 1362
BspTI	CTTAAG	1 cut(s)	1130
BspTNI	GGTCTC	1 cut(s)	427
BsrFI	RCCGGY	1 cut(s)	1368
BsrI	ACTGG	6 cut(s)	567, 588, 909, 1064, 1181, 1390
BssAI	RCCGGY	1 cut(s)	1368
BssNI	GRCGYC	2 cut(s)	402, 1363
BssSI	CACGAG	1 cut(s)	1191
BssT1I	CCWWGG	4 cut(s)	435, 850, 939, 1395
Bst2BI	CACGAG	1 cut(s)	1191
Bst2UI	CCWGG	4 cut(s)	364, 418, 1448, 1736
Bst4CI	ACNGT	1 cut(s)	1544
Bst6I	CTCTTC	1 cut(s)	281
BstACI	GRCGYC	2 cut(s)	402, 1363
BstAFI	CTTAAG	1 cut(s)	1130
BstAPI	GCANNNNNTGC	1 cut(s)	1142
BstBAI	YACGTR	1 cut(s)	724
BstBI	TTCGAA	1 cut(s)	1513
BstC8I	GCNNGC	9 cut(s)	85, 202, 312, 322, 507, 599, 931, 987, 1643
BstDEI	CTNAG	8 cut(s)	605, 630, 672, 779, 888, 1218, 1242, 1522
BstDSI	CCRYGG	3 cut(s)	315, 939, 1395
BstF5I	GGATG	4 cut(s)	138, 1405, 1680, 1837
BstFNI	CGCG	1 cut(s)	249
BstH2I	RGCGCY	2 cut(s)	405, 1366
BstHHI	GCGC	4 cut(s)	251, 404, 474, 1365
BstMAI	GTCTC	4 cut(s)	304, 427, 699, 919
BstMCI	CGRYCG	1 cut(s)	46
BstNI	CCWGG	4 cut(s)	364, 418, 1448, 1736
BstNSI	RCATGY	2 cut(s)	478, 1807
BstSFI	CTRYAG	1 cut(s)	1859
BstSLI	GKGCMC	1 cut(s)	417
BstUI	CGCG	1 cut(s)	249
BstV1I	GCAGC	8 cut(s)	126, 129, 132, 613, 820, 913, 1129, 1562
BstV2I	GAAGAC	2 cut(s)	42, 1168
BstX2I	RGATCY	2 cut(s)	61, 1330
BstXI	CCANNNNNNTGG	1 cut(s)	1385
BstYI	RGATCY	2 cut(s)	61, 1330
BtgI	CCRYGG	3 cut(s)	315, 939, 1395
BtsCI	GGATG	4 cut(s)	138, 1405, 1680, 1837
BtsI	GCAGTG	2 cut(s)	1143, 1724
BtsIMutI	CAGTG	5 cut(s)	574, 1051, 1143, 1549, 1724
Cac8I	GCNNGC	9 cut(s)	85, 202, 312, 322, 507, 599, 931, 987, 1643
CaiI	CAGNNNCTG	1 cut(s)	1142
CfoI	GCGC	4 cut(s)	251, 404, 474, 1365
Cfr10I	RCCGGY	1 cut(s)	1368
Cfr9I	CCCGGG	1 cut(s)	330
Csp6I	GTAC	3 cut(s)	244, 1103, 1807
CviQI	GTAC	3 cut(s)	244, 1103, 1807
DdeI	CTNAG	8 cut(s)	605, 630, 672, 779, 888, 1218, 1242, 1522
DinI	GGCGCC	2 cut(s)	403, 1364
EaeI	YGGCCR	2 cut(s)	432, 507
Eam1104I	CTCTTC	1 cut(s)	281
EarI	CTCTTC	1 cut(s)	281
EciI	GGCGGA	1 cut(s)	42
Ecl136II	GAGCTC	3 cut(s)	274, 535, 833
Eco130I	CCWWGG	4 cut(s)	435, 850, 939, 1395
Eco147I	AGGCCT	1 cut(s)	1128
Eco24I	GRGCYC	5 cut(s)	276, 417, 537, 835, 863
Eco31I	GGTCTC	1 cut(s)	427
Eco32I	GATATC	1 cut(s)	1855
Eco47I	GGWCC	5 cut(s)	10, 151, 334, 564, 1208
Eco53kI	GAGCTC	3 cut(s)	274, 535, 833
Eco88I	CYCGRG	4 cut(s)	161, 330, 452, 521
EcoICRI	GAGCTC	3 cut(s)	274, 535, 833
EcoO109I	RGGNCCY	4 cut(s)	10, 256, 414, 1208
EcoRII	CCWGG	4 cut(s)	362, 416, 1446, 1734
EcoRV	GATATC	1 cut(s)	1855
EcoT14I	CCWWGG	4 cut(s)	435, 850, 939, 1395
EcoT38I	GRGCYC	5 cut(s)	276, 417, 537, 835, 863
EgeI	GGCGCC	2 cut(s)	403, 1364
EheI	GGCGCC	2 cut(s)	403, 1364
ErhI	CCWWGG	4 cut(s)	435, 850, 939, 1395
Esp3I	CGTCTC	1 cut(s)	304
FaqI	GGGAC	3 cut(s)	7, 577, 1619
FauI	CCCGC	6 cut(s)	92, 209, 303, 329, 1451, 1739
FbaI	TGATCA	2 cut(s)	1471, 1759
FblI	GTMKAC	1 cut(s)	1185
FokI	GGATG	4 cut(s)	125, 1412, 1687, 1844
FriOI	GRGCYC	5 cut(s)	276, 417, 537, 835, 863
FspBI	CTAG	2 cut(s)	173, 851
GlaI	GCGC	4 cut(s)	250, 403, 473, 1364
GsaI	CCCAGC	1 cut(s)	114
GsuI	CTGGAG	2 cut(s)	710, 1073
HaeII	RGCGCY	2 cut(s)	405, 1366
HapII	CCGG	6 cut(s)	96, 149, 331, 337, 1369, 1603
HhaI	GCGC	4 cut(s)	251, 404, 474, 1365
Hin1I	GRCGYC	2 cut(s)	402, 1363
Hin6I	GCGC	4 cut(s)	249, 402, 472, 1363
HinP1I	GCGC	4 cut(s)	249, 402, 472, 1363
HincII	GTYRAC	3 cut(s)	762, 1186, 1692
HindII	GTYRAC	3 cut(s)	762, 1186, 1692
HindIII	AAGCTT	2 cut(s)	1476, 1592
HinfI	GANTC	7 cut(s)	512, 626, 692, 1109, 1391, 1622, 1665
HpaI	GTTAAC	1 cut(s)	1692
HpaII	CCGG	6 cut(s)	96, 149, 331, 337, 1369, 1603
Hpy166II	GTNNAC	5 cut(s)	762, 1166, 1186, 1463, 1692
Hpy188I	TCNGA	9 cut(s)	34, 271, 631, 699, 877, 1014, 1023, 1219, 1243
Hpy188III	TCNNGA	9 cut(s)	163, 173, 454, 671, 689, 899, 1090, 1193, 1709
Hpy8I	GTNNAC	5 cut(s)	762, 1166, 1186, 1463, 1692
Hpy99I	CGWCG	3 cut(s)	44, 494, 647
HpyAV	CCTTC	3 cut(s)	24, 1118, 1397
HpyCH4III	ACNGT	1 cut(s)	1544
HpyCH4IV	ACGT	4 cut(s)	168, 180, 723, 1285
HpyF3I	CTNAG	8 cut(s)	605, 630, 672, 779, 888, 1218, 1242, 1522
HpySE526I	ACGT	4 cut(s)	168, 180, 723, 1285
Hsp92I	GRCGYC	2 cut(s)	402, 1363
HspAI	GCGC	4 cut(s)	249, 402, 472, 1363
KasI	GGCGCC	2 cut(s)	401, 1362
KpnI	GGTACC	1 cut(s)	247
Ksp22I	TGATCA	2 cut(s)	1471, 1759
KspAI	GTTAAC	1 cut(s)	1692
LguI	GCTCTTC	1 cut(s)	281
LmnI	GCTCC	5 cut(s)	98, 532, 838, 1092, 1412
Lsp1109I	GCAGC	8 cut(s)	126, 129, 132, 613, 820, 913, 1129, 1562
LweI	GCATC	1 cut(s)	1654
MaeI	CTAG	2 cut(s)	173, 851
MaeII	ACGT	4 cut(s)	168, 180, 723, 1285
MaeIII	GTNAC	4 cut(s)	481, 1381, 1538, 1544
MboII	GAAGA	5 cut(s)	47, 268, 784, 1168, 1208
MfeI	CAATTG	1 cut(s)	801
MflI	RGATCY	2 cut(s)	61, 1330
MhlI	GDGCHC	6 cut(s)	186, 276, 417, 537, 835, 863
MlsI	TGGCCA	1 cut(s)	434
MluCI	AATT	7 cut(s)	727, 801, 990, 1024, 1426, 1505, 1583
MluNI	TGGCCA	1 cut(s)	434
Mly113I	GGCGCC	2 cut(s)	402, 1363
MlyI	GAGTC	3 cut(s)	521, 701, 1400
MmeI	TCCRAC	2 cut(s)	39, 99
Mox20I	TGGCCA	1 cut(s)	434
MscI	TGGCCA	1 cut(s)	434
MseI	TTAA	5 cut(s)	378, 1059, 1131, 1691, 1752
Msp20I	TGGCCA	1 cut(s)	434
MspCI	CTTAAG	1 cut(s)	1130
MspI	CCGG	6 cut(s)	96, 149, 331, 337, 1369, 1603
MunI	CAATTG	1 cut(s)	801
Mva1269I	GAATGC	1 cut(s)	722
MvaI	CCWGG	4 cut(s)	364, 418, 1448, 1736
MvnI	CGCG	1 cut(s)	249
NarI	GGCGCC	2 cut(s)	402, 1363
NciI	CCSGG	6 cut(s)	97, 149, 331, 332, 338, 1604
NcoI	CCATGG	2 cut(s)	939, 1395
NlaIV	GGNNCC	9 cut(s)	12, 63, 245, 335, 403, 415, 565, 1209, 1364
NmeAIII	GCCGAG	4 cut(s)	277, 427, 535, 1675
NmuCI	GTSAC	3 cut(s)	481, 1538, 1544
NspI	RCATGY	2 cut(s)	478, 1807
NspV	TTCGAA	1 cut(s)	1513
PaeR7I	CTCGAG	2 cut(s)	161, 452
PasI	CCCWGGG	1 cut(s)	417
PceI	AGGCCT	1 cut(s)	1128
PciI	ACATGT	1 cut(s)	1803
PciSI	GCTCTTC	1 cut(s)	281
PcsI	WCGNNNNNNNCGW	1 cut(s)	729
PctI	GAATGC	1 cut(s)	722
PfeI	GAWTC	4 cut(s)	626, 1109, 1622, 1665
PflFI	GACNNNGTC	1 cut(s)	155
PfoI	TCCNGGA	1 cut(s)	1602
PleI	GAGTC	3 cut(s)	520, 700, 1399
PluTI	GGCGCC	2 cut(s)	405, 1366
PpsI	GAGTC	3 cut(s)	520, 700, 1399
Ppu21I	YACGTR	1 cut(s)	724
PpuMI	RGGWCCY	2 cut(s)	10, 1208
PscI	ACATGT	1 cut(s)	1803
Psp124BI	GAGCTC	3 cut(s)	276, 537, 835
Psp1406I	AACGTT	1 cut(s)	168
Psp5II	RGGWCCY	2 cut(s)	10, 1208
Psp6I	CCWGG	4 cut(s)	362, 416, 1446, 1734
PspFI	CCCAGC	1 cut(s)	110
PspGI	CCWGG	4 cut(s)	362, 416, 1446, 1734
PspN4I	GGNNCC	9 cut(s)	12, 63, 245, 335, 403, 415, 565, 1209, 1364
PspOMI	GGGCCC	1 cut(s)	413
PspPPI	RGGWCCY	2 cut(s)	10, 1208
PstNI	CAGNNNCTG	1 cut(s)	1142
PsuI	RGATCY	2 cut(s)	61, 1330
PsyI	GACNNNGTC	1 cut(s)	155
RsaI	GTAC	3 cut(s)	245, 1104, 1808
RsaNI	GTAC	3 cut(s)	244, 1103, 1807
SacI	GAGCTC	3 cut(s)	276, 537, 835
SalI	GTCGAC	1 cut(s)	1184
SapI	GCTCTTC	1 cut(s)	281
SaqAI	TTAA	5 cut(s)	378, 1059, 1131, 1691, 1752
SchI	GAGTC	3 cut(s)	521, 701, 1400
SduI	GDGCHC	6 cut(s)	186, 276, 417, 537, 835, 863
SfaNI	GCATC	1 cut(s)	1654
SfcI	CTRYAG	1 cut(s)	1859
SfoI	GGCGCC	2 cut(s)	403, 1364
Sfr274I	CTCGAG	2 cut(s)	161, 452
SfuI	TTCGAA	1 cut(s)	1513
SinI	GGWCC	5 cut(s)	10, 151, 334, 564, 1208
SlaI	CTCGAG	2 cut(s)	161, 452
SmaI	CCCGGG	1 cut(s)	332
SmlI	CTYRAG	6 cut(s)	161, 452, 467, 1130, 1568, 1719
SmoI	CTYRAG	6 cut(s)	161, 452, 467, 1130, 1568, 1719
Sse9I	AATT	7 cut(s)	727, 801, 990, 1024, 1426, 1505, 1583
SseBI	AGGCCT	1 cut(s)	1128
SspDI	GGCGCC	2 cut(s)	401, 1362
SspMI	CTAG	2 cut(s)	173, 851
SstI	GAGCTC	3 cut(s)	276, 537, 835
StuI	AGGCCT	1 cut(s)	1128
StyI	CCWWGG	4 cut(s)	435, 850, 939, 1395
TaaI	ACNGT	1 cut(s)	1544
TaiI	ACGT	4 cut(s)	171, 183, 726, 1288
TaqI	TCGA	8 cut(s)	162, 453, 732, 829, 1107, 1185, 1513, 1708
TaqII	GACCGA	1 cut(s)	60
TasI	AATT	7 cut(s)	727, 801, 990, 1024, 1426, 1505, 1583
TauI	GCSGC	2 cut(s)	221, 391
TfiI	GAWTC	4 cut(s)	626, 1109, 1622, 1665
Tru1I	TTAA	5 cut(s)	378, 1059, 1131, 1691, 1752
Tru9I	TTAA	5 cut(s)	378, 1059, 1131, 1691, 1752
TscAI	CASTG	5 cut(s)	574, 1051, 1143, 1549, 1731
TseFI	GTSAC	3 cut(s)	481, 1538, 1544
TseI	GCWGC	8 cut(s)	114, 117, 120, 601, 808, 926, 1142, 1575
Tsp45I	GTSAC	3 cut(s)	481, 1538, 1544
TspDTI	ATGAA	7 cut(s)	6, 268, 861, 1137, 1311, 1416, 1439
TspGWI	ACGGA	2 cut(s)	415, 469
TspMI	CCCGGG	1 cut(s)	330
TspRI	CASTG	5 cut(s)	574, 1051, 1143, 1549, 1731
Tth111I	GACNNNGTC	1 cut(s)	155
Vha464I	CTTAAG	1 cut(s)	1130
VpaK11BI	GGWCC	5 cut(s)	10, 151, 334, 564, 1208
XapI	RAATTY	2 cut(s)	727, 1024
XbaI	TCTAGA	1 cut(s)	172
XceI	RCATGY	2 cut(s)	478, 1807
XcmI	CCANNNNNNNNNTGG	1 cut(s)	493
XhoI	CTCGAG	2 cut(s)	161, 452
XmaI	CCCGGG	1 cut(s)	330
XmaJI	CCTAGG	1 cut(s)	850
XmiI	GTMKAC	1 cut(s)	1185
XspI	CTAG	2 cut(s)	173, 851

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.