Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0011358

Physical Location & Seq

Genomic Coordinates Forward (+)

49635463 .. 49637800

Gene Structure 2338 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG432700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1860 bp

ATGGGAGAGGACCCTTCATCGTCCCAAATGTCCGAAGACGACGACCGATCTCCGCCGTTGGATCCCATCTCCTCCAACAAAGCCCGCAACTGCTCCGGGTCGGGTTGCCCCAGCAGCAGCAGCACCGACTACATCATCCCTTACCCGGACCAAGTCCTCGAGAACGTTCTAGAAAACGTGCTCTGCTTCCTCACCGCCCGCCAAGACCGCAACGCCGCCTCATTGGTCTGCAAGTCATGGTACCGCGCCGAGGCCCTCACCCGATCCGAGCTCTTCATCGGCAACTGCTACGCCGTCTCGCCCCGCCGGGCCACGGTCCGGTTCAGCCGGGTCCGGGCCGTGTCCATCAAGGGAAAGCCCAGGTTCGCCGACTTCAACCTCATGCCGGCCCATTGGGGCGCCCACTTCGGGCCCTGGGTCTCCGCCATGGCCAAGGCTTACCCTTGGCTCGAGAAAGTCTATCTCAAGCGCATGTCCGTCACCGACGACGATCTGGCTCTGCTGGCCGAGTCGTTCCCCGGGTTCAAGGAGCTCGTTCTGGTTTGCTGTGATGGATTTGGGACCAGTGGCCTCGCTGTGGTCGCCAGTAAGTGCAGACAGCTTAGGGTGCTTGATTTGATTGAATCTGAGGTTATTGACGACGATGTGGATTGGATATGTTGTTTTCCTGAGAGCCAAACCTGTCTGGAGTCTCTGATGTTTGATTGCGTAGAATGCCACGTAAATTTTGAGGCATTGGAGAGGCTGGTGATTAGGTCACCTTCCTTGAAGAAACTTAGGTTGAACCGCTATGTTTCAATTGGGCAGCTACACCGCTTGATGGTTCGAGCTCCACAGCTCACTCACCTAGGAACGGGCTCATTCAGTTCATCGGAGGGCAATGCTCAGGGGGATCAAGAACTGGATTGTGTCTCTGCTTTTGCTGCTTGCAAATCCATAGTCTGTCTATCTGGGTTCAAGGAGATATTTGTGGATCAGTTGCCTGCAATTTACCCCGTCTGTGCTAATCTGACCAATCTGAATTTCAGCTATGCAAATATCAGTGCAGAACAACTTAAACCAGTCATACGAAACTGCCACAAGCTCCAGACTTTCTGGGTACTCGATTCAGTATGTGATGAAGGCCTTAAGGCAGTGGCTGCAACTTGCAAGGAACTGCGTGAACTTCGGGTCTTCCCAGTCGACCCTCGTGAAGATATTGAGGGTCCTGTGTCTGAGATTGGTTTCCAAGCCATTTCTGAGGGCTGTAGGAAACTGCAATCTATATTATATTTCTGCCAACGTATGACGAATGAAGCTGTGAAAGCCATGTCAAGGAACTGCCCAGATCTTGTGGTGTTTCGTCTGTGTATAATGGGGCGCCACCGGCCTGACCATGTTACTGGTGAGTCCATGGATGAAGGTTTTGGAGCAATAGTTATGAATTGTAAGAAGCTCACCCGCCTCGCTGTGTCTGGTTTACTGACTGATCAAGCTTTCAGTTATATTGGGCAATATGGAAAATTGGTTCGAACTCTCTCAGTTGCCTTTGCTGGTGACAGTGACATGGCTCTACAATATGTGCTTGAGGGCTGCCCTAAATTGCAGAAGCTTGAAATCCGGGACAGCCCATTTGGGGATTCAGCATTACGCTCTGGCTTGCATCACTATTACAACATGAGATTCCTTTGGATGTCATCATGCTTGTTAACTCGGCAAGGTTGTCGAGATGTTGCTCGAGCGCTGCCCCGCCTGGTTGTGGAAGTGATTAAGAGTGATCAACAACAGGTGGAAACGGGTGAATATGTTGATATACTATACATGTACCGATCCCTTGATGGGCAAAGGGATGATATTCCAAAGTTTGTTGATATCCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000822 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0007154 GO:0007165 GO:0008144 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010011 GO:0010033 GO:0019005 GO:0023052 GO:0031461 GO:0032870 GO:0032991 GO:0036094 GO:0042221 GO:0042562 GO:0043167 GO:0043168 GO:0043178 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_6

Protein Analysis

619

Amino Acids

69.23

Weight (kDa)

5.82

Isoelectric Point (pI)

48.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box_5	PF18511	50 - 89	7.3e-19	F-box
Transp_inhibit	PF18791	110 - 155	1.5e-23	Transport inhibitor response 1 protein domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011358)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24390 AT4G24390 AT5G49980
fragaria_vesca	FvH4_5g35920 FvH4_5g35920
malus_domestica	MD08G1192000.v1.1 MD15G1380700.v1.1
prunus_persica	Prupe.1G526900_v2.0.a1
pyrus_communis	pycom08g16580 pycom15g34120
rosa_chinensis	RchiOBHm_Chr7g0237651
rosa_laevigata	RLG00000000978
rosa_multiflora	Rmu_sc0007826.1_g000009
rosa_roxburghii	Rroxscaffold_3G00223900
rosa_rugosa	Rorug07G0306000
rosa_samantha	Rh7AG462700 Rh7BG432700 Rh7CG479500 Rh7DG448500
rosa_wichuraiana	Rw7G038280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	240
AccB1I	GGYRCC	3 cut(s)	240, 398, 1359
AccI	GTMKAC	1 cut(s)	1182
AccII	CGCG	1 cut(s)	246
AclI	AACGTT	1 cut(s)	165
AclWI	GGATC	6 cut(s)	56, 69, 258, 900, 981, 1803
AcoI	YGGCCR	2 cut(s)	429, 504
AcsI	RAATTY	2 cut(s)	724, 1021
AcyI	GRCGYC	2 cut(s)	399, 1360
AfaI	GTAC	3 cut(s)	242, 1101, 1805
AfeI	AGCGCT	1 cut(s)	1722
AflII	CTTAAG	1 cut(s)	1127
AflIII	ACRYGT	1 cut(s)	1800
AgsI	TTSAA	8 cut(s)	376, 526, 623, 769, 784, 798, 958, 1595
AjnI	CCWGG	3 cut(s)	359, 413, 1731
AjuI	GAANNNNNNNTTGG	2 cut(s)	1007, 1039
AloI	GAACNNNNNNTCC	2 cut(s)	1491, 1523
Alw21I	GWGCWC	4 cut(s)	183, 273, 534, 832
Alw26I	GTCTC	4 cut(s)	301, 424, 696, 916
AlwI	GGATC	6 cut(s)	56, 69, 258, 900, 981, 1803
AlwNI	CAGNNNCTG	1 cut(s)	1139
Ama87I	CYCGRG	4 cut(s)	158, 449, 518, 1716
Aor51HI	AGCGCT	1 cut(s)	1722
ApaI	GGGCCC	1 cut(s)	414
ApeKI	GCWGC	8 cut(s)	114, 117, 120, 805, 923, 1139, 1572, 1723
ApoI	RAATTY	2 cut(s)	724, 1021
ArsI	GACNNNNNNTTYG	4 cut(s)	924, 956, 1595, 1627
Asp718I	GGTACC	1 cut(s)	240
AspA2I	CCTAGG	1 cut(s)	847
AspLEI	GCGC	5 cut(s)	248, 401, 471, 1362, 1723
AsuC2I	CCSGG	8 cut(s)	97, 146, 308, 329, 335, 519, 520, 1601
AsuII	TTCGAA	1 cut(s)	1510
AvaI	CYCGRG	4 cut(s)	158, 449, 518, 1716
AvaII	GGWCC	6 cut(s)	10, 148, 316, 331, 561, 1205
AvrII	CCTAGG	1 cut(s)	847
BaeGI	GKGCMC	1 cut(s)	414
BalI	TGGCCA	1 cut(s)	431
BamHI	GGATCC	1 cut(s)	61
BanI	GGYRCC	3 cut(s)	240, 398, 1359
BanII	GRGCYC	5 cut(s)	273, 414, 534, 832, 860
BauI	CACGAG	1 cut(s)	1188
BbsI	GAAGAC	2 cut(s)	42, 1165
Bbv12I	GWGCWC	4 cut(s)	183, 273, 534, 832
BbvI	GCAGC	8 cut(s)	126, 129, 132, 817, 910, 1126, 1559, 1710
BccI	CCATC	5 cut(s)	74, 353, 545, 814, 1811
BceAI	ACGGC	3 cut(s)	40, 278, 323
BcgI	CGANNNNNNTGC	2 cut(s)	1685, 1719
BciT130I	CCWGG	3 cut(s)	361, 415, 1733
BclI	TGATCA	2 cut(s)	1468, 1756
BcnI	CCSGG	8 cut(s)	97, 146, 308, 329, 335, 519, 520, 1601
BcoDI	GTCTC	4 cut(s)	301, 424, 696, 916
BfaI	CTAG	2 cut(s)	170, 848
BfmI	CTRYAG	2 cut(s)	1246, 1856
BfoI	RGCGCY	3 cut(s)	402, 1363, 1724
BfrI	CTTAAG	1 cut(s)	1127
BglII	AGATCT	1 cut(s)	1327
BisI	GCNGC	9 cut(s)	115, 118, 121, 216, 806, 924, 1140, 1573, 1724
BlnI	CCTAGG	1 cut(s)	847
BlsI	GCNGC	9 cut(s)	116, 119, 122, 217, 807, 925, 1141, 1574, 1725
Bme18I	GGWCC	6 cut(s)	10, 148, 316, 331, 561, 1205
BmeT110I	CYCGRG	4 cut(s)	158, 449, 518, 1716
BmiI	GGNNCC	9 cut(s)	12, 63, 242, 332, 400, 412, 562, 1206, 1361
BmrI	ACTGGG	1 cut(s)	1172
BmsI	GCATC	1 cut(s)	1651
BmuI	ACTGGG	1 cut(s)	1172
BpiI	GAAGAC	2 cut(s)	42, 1165
BpmI	CTGGAG	2 cut(s)	707, 1070
Bpu10I	CCTNAGC	2 cut(s)	602, 885
Bpu14I	TTCGAA	1 cut(s)	1510
BpuEI	CTTGAG	2 cut(s)	449, 1586
BpuMI	CCSGG	8 cut(s)	97, 146, 308, 329, 335, 519, 520, 1601
BsaAI	YACGTR	1 cut(s)	721
BsaHI	GRCGYC	2 cut(s)	399, 1360
BsaI	GGTCTC	1 cut(s)	424
BsaWI	WCCGGW	1 cut(s)	318
BsaXI	ACNNNNNCTCC	2 cut(s)	1401, 1431
Bse118I	RCCGGY	2 cut(s)	385, 1365
Bse1I	ACTGG	6 cut(s)	564, 585, 906, 1061, 1178, 1387
Bse3DI	GCAATG	1 cut(s)	886
BseBI	CCWGG	3 cut(s)	361, 415, 1733
BseGI	GGATG	4 cut(s)	135, 1402, 1677, 1834
BseMI	GCAATG	1 cut(s)	886
BseMII	CTCAG	6 cut(s)	618, 660, 899, 1206, 1230, 1533
BseNI	ACTGG	6 cut(s)	564, 585, 906, 1061, 1178, 1387
BseRI	GAGGAG	1 cut(s)	61
BseSI	GKGCMC	1 cut(s)	414
BseXI	GCAGC	8 cut(s)	126, 129, 132, 817, 910, 1126, 1559, 1710
BseYI	CCCAGC	1 cut(s)	110
BsgI	GTGCAG	2 cut(s)	613, 1065
Bsh1236I	CGCG	1 cut(s)	246
Bsh1285I	CGRYCG	1 cut(s)	46
BshNI	GGYRCC	3 cut(s)	240, 398, 1359
BsiEI	CGRYCG	1 cut(s)	46
BsiHKAI	GWGCWC	4 cut(s)	183, 273, 534, 832
BsiHKCI	CYCGRG	4 cut(s)	158, 449, 518, 1716
BslFI	GGGAC	3 cut(s)	7, 574, 1616
BsmAI	GTCTC	4 cut(s)	301, 424, 696, 916
BsmBI	CGTCTC	1 cut(s)	301
BsmFI	GGGAC	3 cut(s)	7, 574, 1616
BsmI	GAATGC	1 cut(s)	719
Bso31I	GGTCTC	1 cut(s)	424
BsoBI	CYCGRG	4 cut(s)	158, 449, 518, 1716
Bsp119I	TTCGAA	1 cut(s)	1510
Bsp120I	GGGCCC	1 cut(s)	410
Bsp1286I	GDGCHC	6 cut(s)	183, 273, 414, 534, 832, 860
Bsp19I	CCATGG	2 cut(s)	426, 1392
BspCNI	CTCAG	6 cut(s)	619, 661, 898, 1207, 1231, 1532
BspFNI	CGCG	1 cut(s)	246
BspLI	GGNNCC	9 cut(s)	12, 63, 242, 332, 400, 412, 562, 1206, 1361
BspPI	GGATC	6 cut(s)	56, 69, 258, 900, 981, 1803
BspQI	GCTCTTC	1 cut(s)	278
BspT104I	TTCGAA	1 cut(s)	1510
BspT107I	GGYRCC	3 cut(s)	240, 398, 1359
BspTI	CTTAAG	1 cut(s)	1127
BspTNI	GGTCTC	1 cut(s)	424
BsrDI	GCAATG	1 cut(s)	886
BsrFI	RCCGGY	2 cut(s)	385, 1365
BsrI	ACTGG	6 cut(s)	564, 585, 906, 1061, 1178, 1387
BssAI	RCCGGY	2 cut(s)	385, 1365
BssNI	GRCGYC	2 cut(s)	399, 1360
BssSI	CACGAG	1 cut(s)	1188
BssT1I	CCWWGG	5 cut(s)	426, 432, 443, 847, 1392
Bst2BI	CACGAG	1 cut(s)	1188
Bst2UI	CCWGG	3 cut(s)	361, 415, 1733
Bst4CI	ACNGT	2 cut(s)	316, 1541
Bst6I	CTCTTC	1 cut(s)	278
BstACI	GRCGYC	2 cut(s)	399, 1360
BstAFI	CTTAAG	1 cut(s)	1127
BstAPI	GCANNNNNTGC	1 cut(s)	1139
BstBAI	YACGTR	1 cut(s)	721
BstBI	TTCGAA	1 cut(s)	1510
BstC8I	GCNNGC	7 cut(s)	85, 199, 387, 504, 928, 984, 1640
BstDEI	CTNAG	8 cut(s)	602, 627, 669, 776, 885, 1215, 1239, 1519
BstDSI	CCRYGG	3 cut(s)	312, 426, 1392
BstEII	GGTNACC	1 cut(s)	756
BstF5I	GGATG	4 cut(s)	135, 1402, 1677, 1834
BstFNI	CGCG	1 cut(s)	246
BstH2I	RGCGCY	3 cut(s)	402, 1363, 1724
BstHHI	GCGC	5 cut(s)	248, 401, 471, 1362, 1723
BstMAI	GTCTC	4 cut(s)	301, 424, 696, 916
BstMCI	CGRYCG	1 cut(s)	46
BstNI	CCWGG	3 cut(s)	361, 415, 1733
BstNSI	RCATGY	2 cut(s)	475, 1804
BstPI	GGTNACC	1 cut(s)	756
BstSFI	CTRYAG	2 cut(s)	1246, 1856
BstSLI	GKGCMC	1 cut(s)	414
BstUI	CGCG	1 cut(s)	246
BstV1I	GCAGC	8 cut(s)	126, 129, 132, 817, 910, 1126, 1559, 1710
BstV2I	GAAGAC	2 cut(s)	42, 1165
BstX2I	RGATCY	2 cut(s)	61, 1327
BstXI	CCANNNNNNTGG	1 cut(s)	1382
BstYI	RGATCY	2 cut(s)	61, 1327
BtgI	CCRYGG	3 cut(s)	312, 426, 1392
BtsCI	GGATG	4 cut(s)	135, 1402, 1677, 1834
BtsI	GCAGTG	1 cut(s)	1140
BtsIMutI	CAGTG	4 cut(s)	571, 1048, 1140, 1546
Cac8I	GCNNGC	7 cut(s)	85, 199, 387, 504, 928, 984, 1640
CaiI	CAGNNNCTG	1 cut(s)	1139
CfoI	GCGC	5 cut(s)	248, 401, 471, 1362, 1723
Cfr10I	RCCGGY	2 cut(s)	385, 1365
Cfr9I	CCCGGG	1 cut(s)	518
CpoI	CGGWCCG	1 cut(s)	316
Csp6I	GTAC	3 cut(s)	241, 1100, 1804
CspI	CGGWCCG	1 cut(s)	316
CviQI	GTAC	3 cut(s)	241, 1100, 1804
DdeI	CTNAG	8 cut(s)	602, 627, 669, 776, 885, 1215, 1239, 1519
DinI	GGCGCC	2 cut(s)	400, 1361
EaeI	YGGCCR	2 cut(s)	429, 504
Eam1104I	CTCTTC	1 cut(s)	278
EarI	CTCTTC	1 cut(s)	278
EciI	GGCGGA	2 cut(s)	42, 412
Ecl136II	GAGCTC	3 cut(s)	271, 532, 830
Eco130I	CCWWGG	5 cut(s)	426, 432, 443, 847, 1392
Eco147I	AGGCCT	1 cut(s)	1125
Eco24I	GRGCYC	5 cut(s)	273, 414, 534, 832, 860
Eco31I	GGTCTC	1 cut(s)	424
Eco32I	GATATC	1 cut(s)	1852
Eco47I	GGWCC	6 cut(s)	10, 148, 316, 331, 561, 1205
Eco47III	AGCGCT	1 cut(s)	1722
Eco53kI	GAGCTC	3 cut(s)	271, 532, 830
Eco88I	CYCGRG	4 cut(s)	158, 449, 518, 1716
Eco91I	GGTNACC	1 cut(s)	756
EcoICRI	GAGCTC	3 cut(s)	271, 532, 830
EcoO109I	RGGNCCY	4 cut(s)	10, 253, 411, 1205
EcoO65I	GGTNACC	1 cut(s)	756
EcoRII	CCWGG	3 cut(s)	359, 413, 1731
EcoRV	GATATC	1 cut(s)	1852
EcoT14I	CCWWGG	5 cut(s)	426, 432, 443, 847, 1392
EcoT38I	GRGCYC	5 cut(s)	273, 414, 534, 832, 860
EgeI	GGCGCC	2 cut(s)	400, 1361
EheI	GGCGCC	2 cut(s)	400, 1361
ErhI	CCWWGG	5 cut(s)	426, 432, 443, 847, 1392
Esp3I	CGTCTC	1 cut(s)	301
FaqI	GGGAC	3 cut(s)	7, 574, 1616
FauI	CCCGC	5 cut(s)	92, 206, 311, 1448, 1736
FbaI	TGATCA	2 cut(s)	1468, 1756
FblI	GTMKAC	1 cut(s)	1182
Fnu4HI	GCNGC	9 cut(s)	115, 118, 121, 216, 806, 924, 1140, 1573, 1724
FokI	GGATG	4 cut(s)	122, 1409, 1684, 1841
FriOI	GRGCYC	5 cut(s)	273, 414, 534, 832, 860
Fsp4HI	GCNGC	9 cut(s)	115, 118, 121, 216, 806, 924, 1140, 1573, 1724
FspBI	CTAG	2 cut(s)	170, 848
GlaI	GCGC	5 cut(s)	247, 400, 470, 1361, 1722
GluI	GCNGC	9 cut(s)	115, 118, 121, 216, 806, 924, 1140, 1573, 1724
GsaI	CCCAGC	1 cut(s)	114
GsuI	CTGGAG	2 cut(s)	707, 1070
HaeII	RGCGCY	3 cut(s)	402, 1363, 1724
HhaI	GCGC	5 cut(s)	248, 401, 471, 1362, 1723
Hin1I	GRCGYC	2 cut(s)	399, 1360
Hin6I	GCGC	5 cut(s)	246, 399, 469, 1360, 1721
HinP1I	GCGC	5 cut(s)	246, 399, 469, 1360, 1721
HincII	GTYRAC	2 cut(s)	1183, 1689
HindII	GTYRAC	2 cut(s)	1183, 1689
HindIII	AAGCTT	2 cut(s)	1473, 1589
HinfI	GANTC	7 cut(s)	509, 623, 689, 1106, 1388, 1619, 1662
HpaI	GTTAAC	1 cut(s)	1689
Hpy166II	GTNNAC	4 cut(s)	1163, 1183, 1460, 1689
Hpy188I	TCNGA	9 cut(s)	34, 268, 628, 696, 874, 1011, 1020, 1216, 1240
Hpy188III	TCNNGA	9 cut(s)	160, 170, 451, 668, 686, 896, 1087, 1190, 1706
Hpy8I	GTNNAC	4 cut(s)	1163, 1183, 1460, 1689
Hpy99I	CGWCG	4 cut(s)	44, 488, 491, 644
HpyAV	CCTTC	4 cut(s)	24, 771, 1115, 1394
HpyCH4III	ACNGT	2 cut(s)	316, 1541
HpyCH4IV	ACGT	4 cut(s)	165, 177, 720, 1282
HpyF3I	CTNAG	8 cut(s)	602, 627, 669, 776, 885, 1215, 1239, 1519
HpySE526I	ACGT	4 cut(s)	165, 177, 720, 1282
Hsp92I	GRCGYC	2 cut(s)	399, 1360
HspAI	GCGC	5 cut(s)	246, 399, 469, 1360, 1721
KasI	GGCGCC	2 cut(s)	398, 1359
KpnI	GGTACC	1 cut(s)	244
KroI	GCCGGC	1 cut(s)	385
KroNI	GCCGGC	1 cut(s)	387
Ksp22I	TGATCA	2 cut(s)	1468, 1756
KspAI	GTTAAC	1 cut(s)	1689
LguI	GCTCTTC	1 cut(s)	278
LmnI	GCTCC	5 cut(s)	98, 529, 835, 1089, 1409
Lsp1109I	GCAGC	8 cut(s)	126, 129, 132, 817, 910, 1126, 1559, 1710
LweI	GCATC	1 cut(s)	1651
MaeI	CTAG	2 cut(s)	170, 848
MaeII	ACGT	4 cut(s)	165, 177, 720, 1282
MaeIII	GTNAC	5 cut(s)	478, 756, 1378, 1535, 1541
MboII	GAAGA	5 cut(s)	47, 265, 781, 1165, 1205
MfeI	CAATTG	1 cut(s)	798
MflI	RGATCY	2 cut(s)	61, 1327
MhlI	GDGCHC	6 cut(s)	183, 273, 414, 534, 832, 860
MlsI	TGGCCA	1 cut(s)	431
MluCI	AATT	7 cut(s)	724, 798, 987, 1021, 1423, 1502, 1580
MluNI	TGGCCA	1 cut(s)	431
Mly113I	GGCGCC	2 cut(s)	399, 1360
MlyI	GAGTC	3 cut(s)	518, 698, 1397
MmeI	TCCRAC	2 cut(s)	39, 99
Mox20I	TGGCCA	1 cut(s)	431
MroNI	GCCGGC	1 cut(s)	385
MscI	TGGCCA	1 cut(s)	431
MseI	TTAA	4 cut(s)	1056, 1128, 1688, 1749
Msp20I	TGGCCA	1 cut(s)	431
MspCI	CTTAAG	1 cut(s)	1127
MunI	CAATTG	1 cut(s)	798
Mva1269I	GAATGC	1 cut(s)	719
MvaI	CCWGG	3 cut(s)	361, 415, 1733
MvnI	CGCG	1 cut(s)	246
NaeI	GCCGGC	1 cut(s)	387
NarI	GGCGCC	2 cut(s)	399, 1360
NciI	CCSGG	8 cut(s)	97, 146, 308, 329, 335, 519, 520, 1601
NcoI	CCATGG	2 cut(s)	426, 1392
NgoMIV	GCCGGC	1 cut(s)	385
NlaIV	GGNNCC	9 cut(s)	12, 63, 242, 332, 400, 412, 562, 1206, 1361
NmeAIII	GCCGAG	3 cut(s)	274, 532, 1672
NmuCI	GTSAC	4 cut(s)	478, 756, 1535, 1541
NspI	RCATGY	2 cut(s)	475, 1804
NspV	TTCGAA	1 cut(s)	1510
PaeR7I	CTCGAG	3 cut(s)	158, 449, 1716
PasI	CCCWGGG	1 cut(s)	414
PceI	AGGCCT	1 cut(s)	1125
PciI	ACATGT	1 cut(s)	1800
PciSI	GCTCTTC	1 cut(s)	278
PctI	GAATGC	1 cut(s)	719
PdiI	GCCGGC	1 cut(s)	387
PfeI	GAWTC	4 cut(s)	623, 1106, 1619, 1662
PflFI	GACNNNGTC	1 cut(s)	152
PfoI	TCCNGGA	1 cut(s)	1599
PkrI	GCNGC	9 cut(s)	116, 119, 122, 217, 807, 925, 1141, 1574, 1725
PleI	GAGTC	3 cut(s)	517, 697, 1396
PluTI	GGCGCC	2 cut(s)	402, 1363
PpsI	GAGTC	3 cut(s)	517, 697, 1396
Ppu21I	YACGTR	1 cut(s)	721
PpuMI	RGGWCCY	2 cut(s)	10, 1205
PscI	ACATGT	1 cut(s)	1800
Psp124BI	GAGCTC	3 cut(s)	273, 534, 832
Psp1406I	AACGTT	1 cut(s)	165
Psp5II	RGGWCCY	2 cut(s)	10, 1205
Psp6I	CCWGG	3 cut(s)	359, 413, 1731
PspEI	GGTNACC	1 cut(s)	756
PspFI	CCCAGC	1 cut(s)	110
PspGI	CCWGG	3 cut(s)	359, 413, 1731
PspN4I	GGNNCC	9 cut(s)	12, 63, 242, 332, 400, 412, 562, 1206, 1361
PspOMI	GGGCCC	1 cut(s)	410
PspPPI	RGGWCCY	2 cut(s)	10, 1205
PspXI	VCTCGAGB	1 cut(s)	1716
PstNI	CAGNNNCTG	1 cut(s)	1139
PsuI	RGATCY	2 cut(s)	61, 1327
PsyI	GACNNNGTC	1 cut(s)	152
RsaI	GTAC	3 cut(s)	242, 1101, 1805
RsaNI	GTAC	3 cut(s)	241, 1100, 1804
Rsr2I	CGGWCCG	1 cut(s)	316
RsrII	CGGWCCG	1 cut(s)	316
SacI	GAGCTC	3 cut(s)	273, 534, 832
SalI	GTCGAC	1 cut(s)	1181
SapI	GCTCTTC	1 cut(s)	278
SaqAI	TTAA	4 cut(s)	1056, 1128, 1688, 1749
SatI	GCNGC	9 cut(s)	115, 118, 121, 216, 806, 924, 1140, 1573, 1724
SchI	GAGTC	3 cut(s)	518, 698, 1397
SduI	GDGCHC	6 cut(s)	183, 273, 414, 534, 832, 860
SfaNI	GCATC	1 cut(s)	1651
SfcI	CTRYAG	2 cut(s)	1246, 1856
SfoI	GGCGCC	2 cut(s)	400, 1361
Sfr274I	CTCGAG	3 cut(s)	158, 449, 1716
SfuI	TTCGAA	1 cut(s)	1510
SinI	GGWCC	6 cut(s)	10, 148, 316, 331, 561, 1205
SlaI	CTCGAG	3 cut(s)	158, 449, 1716
SmaI	CCCGGG	1 cut(s)	520
SmlI	CTYRAG	6 cut(s)	158, 449, 464, 1127, 1565, 1716
SmoI	CTYRAG	6 cut(s)	158, 449, 464, 1127, 1565, 1716
Sse9I	AATT	7 cut(s)	724, 798, 987, 1021, 1423, 1502, 1580
SseBI	AGGCCT	1 cut(s)	1125
SspDI	GGCGCC	2 cut(s)	398, 1359
SspMI	CTAG	2 cut(s)	170, 848
SstI	GAGCTC	3 cut(s)	273, 534, 832
StuI	AGGCCT	1 cut(s)	1125
StyI	CCWWGG	5 cut(s)	426, 432, 443, 847, 1392
TaaI	ACNGT	2 cut(s)	316, 1541
TaiI	ACGT	4 cut(s)	168, 180, 723, 1285
TaqI	TCGA	8 cut(s)	159, 450, 826, 1104, 1182, 1510, 1705, 1717
TaqII	GACCGA	1 cut(s)	60
TasI	AATT	7 cut(s)	724, 798, 987, 1021, 1423, 1502, 1580
TauI	GCSGC	1 cut(s)	218
TfiI	GAWTC	4 cut(s)	623, 1106, 1619, 1662
Tru1I	TTAA	4 cut(s)	1056, 1128, 1688, 1749
Tru9I	TTAA	4 cut(s)	1056, 1128, 1688, 1749
TscAI	CASTG	4 cut(s)	571, 1048, 1140, 1546
TseFI	GTSAC	4 cut(s)	478, 756, 1535, 1541
TseI	GCWGC	8 cut(s)	114, 117, 120, 805, 923, 1139, 1572, 1723
Tsp45I	GTSAC	4 cut(s)	478, 756, 1535, 1541
TspDTI	ATGAA	7 cut(s)	6, 265, 858, 1134, 1308, 1413, 1436
TspGWI	ACGGA	1 cut(s)	466
TspMI	CCCGGG	1 cut(s)	518
TspRI	CASTG	4 cut(s)	571, 1048, 1140, 1546
Tth111I	GACNNNGTC	1 cut(s)	152
Vha464I	CTTAAG	1 cut(s)	1127
VpaK11BI	GGWCC	6 cut(s)	10, 148, 316, 331, 561, 1205
XapI	RAATTY	2 cut(s)	724, 1021
XbaI	TCTAGA	1 cut(s)	169
XceI	RCATGY	2 cut(s)	475, 1804
XhoI	CTCGAG	3 cut(s)	158, 449, 1716
XmaI	CCCGGG	1 cut(s)	518
XmaJI	CCTAGG	1 cut(s)	847
XmiI	GTMKAC	1 cut(s)	1182
XspI	CTAG	2 cut(s)	170, 848

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.