Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0013910

Physical Location & Seq

Genomic Coordinates Forward (+)

622836 .. 625574

Gene Structure 2739 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000000334

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGATTATTCGTTCGCCGGAACCAGAAGTTAAAATTTTGGTAGATAGGGATCCCGTAAAAACTTCTTTCGAGGAATGGGCCAGACCCGGTCATTTCTCAAGAACAATAGCTAAGGGGCCTGATACTACCACTTGGATCTGGAACCTACACGCTGATGCTCACGATTTCGATAGCCATACCAGTGATTTGGAGGAGATCTCTCGAAAAGTATTTAGTGCCCATTTTGGTCAACTCTCCATCATCTTTCTTTGGCTGAGTGGTATGTATTTCCACGGTGCTCGTTTTTCCAATTATGAAGCATGGCTAAGTGATCCTACTCACATTGGACCTAGTGCCCAGGTGGTTTGGCCAATAGTGGGTCAAGAAATATTGAATGGTGATGTAGGCGGGGGTTTCCGAGGAATACAAATAACCTCTGGGTTTTTTCAGCTTTGGCGAGCATCTGGAATAACTAATGAATTACAACTCTATTGTACTGCAATTGGTGCATTGGTCTTTGCTGCCTTAATGCTTTTTGCGGGTTGGTTCCATTATCACAAAGCTGCTCCGAAATTGGCTTGGTTCCAAGATGTAGAATCTATGTTGAATCACCATTTAGCAGGGCTATTAGGCCTTGGGTCTCTTGGTTGGGCGGGGCATCAAGTACACGTATCGTTACCAATTAACCAATTTCTAAACGCTGGAGTAGATCCTAAAGAGATTCCACTTCCTCATGAATTTATCTTGAATCGGGATCTTTTGGCTCAACTTTATCCCAGTTTTGCTGAGGGAGCGACCCCATTTTTCACCTTGAATTGGTCAAAATATGCGGAATTTCTTACTTTTCGTGGAGGATTAGATCCAGTAACTGGAGGTCTATGGCTGACCGATATTGCACACCATCATTTAGCTATTGCAATTCTTTTCCTGGTAGCGGGTCACATGTATAAGACCAATTGGGGCATTGGTCATGGTATAAAAGATATTTTAGAGGCTCATAAAGGCCCATTTACCGGCCAGGGCCATAAAGGCCTATATGAGATCCTAACAACGTCATGGCATGCTCAATTATCTCTTAACCTAGCTATGTTAGGATCTTTAACCATTATTGTAGCTCACCATATGTATGCGATGCCCCCTTATCCATATCTAGCTACTGACTATGGTACACAACTTTCATTGTTCACACATCATATGTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCGCATGCAGCCATTTTTATGGTAAGAGACTATGATCCAACTACTCGATACAACGATCTATTAGATCGTGTCCTTAGGCATCGCGATGCAATCATATCACATCTCAACTGGGTATGTATATTTTTAGGCTTTCACAGTTTTGGTTTGTATATTCATAATGATACCATGAGCGCGTTAGGGCGTCCCCAAGATATGTTTTCAGATACCGCTATACAATTACAGCCCGTCTTTGCTCAATGGATACAAAACACCCACGCTTTAGCACCCGGCGCAACGGCCCCTGGTGCAACAACAAGCACCAGTTTGACTTGGGGGGGTGGTGATTTAGTGGCAGTGGGCGGTAAAGTTGCTTTGTTACCTATTCCATTAGGAACCGCAGATTTTTTGGTACATCACATTCATGCATTTACAATTCATGTGACGGTATTGATACTCCTGAAAGGCGTTCTATTTGCTCGTAGTTCGCGTTTGATACCCGATAAAGCAAATCTTGGTTTTCGTTTTCCTTGTGATGGACCCGGAAGGGGGGGGACATGCCAAGTATCCGCTTGGGATCATGTCTTCTTAGGGCTATTCTGGATGTATAATGCAATTTCGGTAGTAATATTCCATTTCAGTTGGAAAATGCAATCAGATGTTTGGGGTAGTATAAGTGATCAAGGGGTGGTAACTCATATCACGGGAGGAAACTTTGCGCAGAGTTCCATTACTATTAATGGGTGGCTCCGCGATTTCTTATGGGCACAGGCATCCCAAGTAATTCAGTCCTACGGCGCCCATTTTGTATGGGCTTTTAGTTTAATGTTTCTATTCAGCGGACGTGGTTATTGGCAAGAACTTATTGAATCCATTGTTTGGGCTCATAATAAATTAAAAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGTATTGTCCAAGGACGTGCTGTAGGAGTAACCCATTACCTTCTGGGTGGAATTGCCACAACATGGGCGTTCTTCTTAGCAAGAATTATTGCAGTAGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009941 GO:0009987 GO:0010287 GO:0015979 GO:0016020 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035

KEGG Pathways

Metabolic & Signaling

ko00195 ko01100 map00195 map01100

Pfam Domains

Protein Families

PsaA_PsaB

Protein Analysis

739

Amino Acids

81.81

Weight (kDa)

6.67

Isoelectric Point (pI)

29.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PsaA_PsaB	PF00223	32 - 732	0.0	Photosystem I psaA/psaB protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013910)

Species	Orthologous Gene IDs
arabidopsis_thaliana	ATCG00350
malus_domestica	MD05G1127800.v1.1
pyrus_communis	pycom1353g00050
rosa_chinensis	RchiOBHm_CPg0502251
rosa_laevigata	RLG00000000044 RLG00000000064 RLG00000000112 RLG00000000169 RLG00000000227 RLG00000000243 RLG00000000263 RLG00000000288 RLG00000000296 RLG00000000322 RLG00000000327 RLG00000000334
rosa_rugosa	RorugMtG0002200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	1212, 1905
AccB1I	GGYRCC	1 cut(s)	1982
AccB7I	CCANNNNNTGG	3 cut(s)	848, 2064, 2178
AccII	CGCG	4 cut(s)	1293, 1382, 1675, 1938
AcoI	YGGCCR	2 cut(s)	347, 994
AcsI	RAATTY	3 cut(s)	33, 716, 812
AcyI	GRCGYC	2 cut(s)	1390, 1983
AfaI	GTAC	4 cut(s)	475, 645, 1147, 1599
AflIII	ACRYGT	2 cut(s)	646, 921
AgsI	TTSAA	5 cut(s)	373, 586, 727, 793, 2054
AjiI	CACGTC	2 cut(s)	2030, 2132
AjnI	CCWGG	4 cut(s)	336, 906, 996, 1489
AluBI	AGCT	7 cut(s)	110, 430, 542, 890, 1064, 1094, 1133
AluI	AGCT	7 cut(s)	110, 430, 542, 890, 1064, 1094, 1133
Alw21I	GWGCWC	1 cut(s)	280
Alw26I	GTCTC	2 cut(s)	624, 1230
AlwNI	CAGNNNCTG	1 cut(s)	848
AoxI	GGCC	9 cut(s)	78, 116, 347, 610, 982, 994, 1000, 1009, 1485
ApeKI	GCWGC	5 cut(s)	500, 542, 1205, 1208, 1217
ApoI	RAATTY	3 cut(s)	33, 716, 812
AseI	ATTAAT	1 cut(s)	1923
AspLEI	GCGC	5 cut(s)	1213, 1382, 1481, 1906, 1985
AspS9I	GGNCC	7 cut(s)	78, 116, 326, 983, 1000, 1486, 1724
AsuC2I	CCSGG	3 cut(s)	87, 1476, 1728
AsuHPI	GGTGA	5 cut(s)	389, 581, 778, 1088, 1541
AvaII	GGWCC	2 cut(s)	326, 1724
AxyI	CCTNAGG	1 cut(s)	1283
BaeGI	GKGCMC	3 cut(s)	220, 337, 1954
BalI	TGGCCA	1 cut(s)	349
BamHI	GGATCC	1 cut(s)	49
BanI	GGYRCC	1 cut(s)	1982
BanII	GRGCYC	1 cut(s)	2071
BbsI	GAAGAC	1 cut(s)	1762
Bbv12I	GWGCWC	1 cut(s)	280
BbvCI	CCTCAGC	1 cut(s)	765
BbvI	GCAGC	5 cut(s)	487, 529, 1192, 1195, 1229
BccI	CCATC	3 cut(s)	245, 888, 1715
BceAI	ACGGC	2 cut(s)	1500, 1996
BciT130I	CCWGG	4 cut(s)	338, 908, 998, 1491
BciVI	GTATCC	2 cut(s)	1443, 1762
BclI	TGATCA	1 cut(s)	1864
BcnI	CCSGG	3 cut(s)	87, 1476, 1728
BcoDI	GTCTC	2 cut(s)	624, 1230
BfaI	CTAG	4 cut(s)	330, 1061, 1130, 2106
BfmI	CTRYAG	1 cut(s)	2136
BfoI	RGCGCY	1 cut(s)	1986
BfuI	GTATCC	2 cut(s)	1443, 1762
BglI	GCCNNNNNGGC	1 cut(s)	1008
BglII	AGATCT	1 cut(s)	195
BisI	GCNGC	5 cut(s)	501, 543, 1206, 1209, 1218
BlsI	GCNGC	5 cut(s)	502, 544, 1207, 1210, 1219
Bme1390I	CCNGG	7 cut(s)	87, 338, 908, 998, 1476, 1491, 1728
Bme18I	GGWCC	2 cut(s)	326, 1724
BmgBI	CACGTC	2 cut(s)	2030, 2132
BmgT120I	GGNCC	7 cut(s)	78, 116, 326, 983, 1000, 1486, 1724
BmrFI	CCNGG	7 cut(s)	87, 338, 908, 998, 1476, 1491, 1728
BmrI	ACTGGG	2 cut(s)	750, 1327
BmsI	GCATC	7 cut(s)	145, 449, 646, 1101, 1285, 1297, 1967
BmuI	ACTGGG	2 cut(s)	750, 1327
BpiI	GAAGAC	1 cut(s)	1762
BplI	GAGNNNNNCTC	2 cut(s)	182, 214
BpmI	CTGGAG	2 cut(s)	702, 870
Bpu10I	CCTNAGC	2 cut(s)	111, 765
BpuEI	CTTGAG	2 cut(s)	82, 2134
BpuMI	CCSGG	3 cut(s)	87, 1476, 1728
BsaAI	YACGTR	1 cut(s)	649
BsaBI	GATNNNNATC	1 cut(s)	48
BsaHI	GRCGYC	2 cut(s)	1390, 1983
BsaI	GGTCTC	1 cut(s)	624
BsaJI	CCNNGG	7 cut(s)	271, 336, 397, 613, 997, 1489, 2125
Bse118I	RCCGGY	1 cut(s)	992
Bse1I	ACTGG	6 cut(s)	180, 756, 842, 853, 1322, 1509
Bse21I	CCTNAGG	1 cut(s)	1283
Bse8I	GATNNNNATC	1 cut(s)	48
BseBI	CCWGG	4 cut(s)	338, 908, 998, 1491
BseDI	CCNNGG	7 cut(s)	271, 336, 397, 613, 997, 1489, 2125
BseGI	GGATG	2 cut(s)	1794, 1958
BseJI	GATNNNNATC	1 cut(s)	48
BseMII	CTCAG	3 cut(s)	245, 756, 2114
BseNI	ACTGG	6 cut(s)	180, 756, 842, 853, 1322, 1509
BseRI	GAGGAG	1 cut(s)	206
BseSI	GKGCMC	3 cut(s)	220, 337, 1954
BseXI	GCAGC	5 cut(s)	487, 529, 1192, 1195, 1229
Bsh1236I	CGCG	4 cut(s)	1293, 1382, 1675, 1938
BshFI	GGCC	9 cut(s)	80, 118, 349, 612, 984, 996, 1002, 1011, 1487
BshNI	GGYRCC	1 cut(s)	1982
BsiHKAI	GWGCWC	1 cut(s)	280
BsiSI	CCGG	5 cut(s)	17, 87, 993, 1476, 1728
BslFI	GGGAC	2 cut(s)	1377, 1753
BsmAI	GTCTC	2 cut(s)	624, 1230
BsmFI	GGGAC	2 cut(s)	1377, 1753
BsnI	GGCC	9 cut(s)	80, 118, 349, 612, 984, 996, 1002, 1011, 1487
Bso31I	GGTCTC	1 cut(s)	624
Bsp1286I	GDGCHC	5 cut(s)	220, 280, 337, 1954, 2071
Bsp68I	TCGCGA	1 cut(s)	1293
BspANI	GGCC	9 cut(s)	80, 118, 349, 612, 984, 996, 1002, 1011, 1487
BspCNI	CTCAG	3 cut(s)	246, 757, 2113
BspFNI	CGCG	4 cut(s)	1293, 1382, 1675, 1938
BspHI	TCATGA	1 cut(s)	712
BspT107I	GGYRCC	1 cut(s)	1982
BspTNI	GGTCTC	1 cut(s)	624
BsrFI	RCCGGY	1 cut(s)	992
BsrI	ACTGG	6 cut(s)	180, 756, 842, 853, 1322, 1509
BssAI	RCCGGY	1 cut(s)	992
BssECI	CCNNGG	7 cut(s)	271, 336, 397, 613, 997, 1489, 2125
BssNI	GRCGYC	2 cut(s)	1390, 1983
BssT1I	CCWWGG	2 cut(s)	613, 2125
Bst2UI	CCWGG	4 cut(s)	338, 908, 998, 1491
Bst4CI	ACNGT	3 cut(s)	275, 1346, 1633
BstACI	GRCGYC	2 cut(s)	1390, 1983
BstAPI	GCANNNNNTGC	1 cut(s)	485
BstBAI	YACGTR	1 cut(s)	649
BstC8I	GCNNGC	3 cut(s)	438, 1041, 1215
BstDEI	CTNAG	8 cut(s)	111, 254, 305, 765, 1283, 1774, 2100, 2191
BstDSI	CCRYGG	1 cut(s)	271
BstF5I	GGATG	2 cut(s)	1794, 1958
BstFNI	CGCG	4 cut(s)	1293, 1382, 1675, 1938
BstH2I	RGCGCY	1 cut(s)	1986
BstHHI	GCGC	5 cut(s)	1213, 1382, 1481, 1906, 1985
BstMAI	GTCTC	2 cut(s)	624, 1230
BstMWI	GCNNNNNNNGC	7 cut(s)	485, 770, 1008, 1214, 1217, 1478, 1493
BstNI	CCWGG	4 cut(s)	338, 908, 998, 1491
BstNSI	RCATGY	4 cut(s)	925, 1043, 1217, 1746
BstSCI	CCNGG	7 cut(s)	85, 336, 906, 996, 1474, 1489, 1726
BstSFI	CTRYAG	1 cut(s)	2136
BstSLI	GKGCMC	3 cut(s)	220, 337, 1954
BstUI	CGCG	4 cut(s)	1293, 1382, 1675, 1938
BstV1I	GCAGC	5 cut(s)	487, 529, 1192, 1195, 1229
BstV2I	GAAGAC	1 cut(s)	1762
BstX2I	RGATCY	8 cut(s)	49, 135, 195, 688, 733, 838, 1020, 1073
BstXI	CCANNNNNNTGG	2 cut(s)	187, 1228
BstYI	RGATCY	8 cut(s)	49, 135, 195, 688, 733, 838, 1020, 1073
Bsu36I	CCTNAGG	1 cut(s)	1283
BsuI	GTATCC	2 cut(s)	1443, 1762
BsuRI	GGCC	9 cut(s)	80, 118, 349, 612, 984, 996, 1002, 1011, 1487
BtgI	CCRYGG	1 cut(s)	271
BtgZI	GCGATG	3 cut(s)	1124, 1274, 1308
BtrI	CACGTC	2 cut(s)	2030, 2132
BtsCI	GGATG	2 cut(s)	1794, 1958
BtsI	GCAGTG	1 cut(s)	1548
BtsIMutI	CAGTG	2 cut(s)	187, 1548
BtuMI	TCGCGA	1 cut(s)	1293
Cac8I	GCNNGC	3 cut(s)	438, 1041, 1215
CaiI	CAGNNNCTG	1 cut(s)	848
CciI	TCATGA	1 cut(s)	712
CfoI	GCGC	5 cut(s)	1213, 1382, 1481, 1906, 1985
Cfr10I	RCCGGY	1 cut(s)	992
Cfr13I	GGNCC	7 cut(s)	78, 116, 326, 983, 1000, 1486, 1724
CseI	GACGC	1 cut(s)	1379
Csp6I	GTAC	4 cut(s)	474, 644, 1146, 1598
CviQI	GTAC	4 cut(s)	474, 644, 1146, 1598
DdeI	CTNAG	8 cut(s)	111, 254, 305, 765, 1283, 1774, 2100, 2191
DinI	GGCGCC	1 cut(s)	1984
EaeI	YGGCCR	2 cut(s)	347, 994
Eco130I	CCWWGG	2 cut(s)	613, 2125
Eco147I	AGGCCT	2 cut(s)	612, 1011
Eco24I	GRGCYC	1 cut(s)	2071
Eco31I	GGTCTC	1 cut(s)	624
Eco47I	GGWCC	2 cut(s)	326, 1724
Eco81I	CCTNAGG	1 cut(s)	1283
EcoO109I	RGGNCCY	1 cut(s)	116
EcoRII	CCWGG	4 cut(s)	336, 906, 996, 1489
EcoT14I	CCWWGG	2 cut(s)	613, 2125
EcoT22I	ATGCAT	1 cut(s)	1615
EcoT38I	GRGCYC	1 cut(s)	2071
EgeI	GGCGCC	1 cut(s)	1984
EheI	GGCGCC	1 cut(s)	1984
ErhI	CCWWGG	2 cut(s)	613, 2125
FalI	AAGNNNNNCTT	2 cut(s)	1683, 1715
FaqI	GGGAC	2 cut(s)	1377, 1753
FauI	CCCGC	4 cut(s)	380, 511, 625, 907
FauNDI	CATATG	2 cut(s)	1101, 1173
FbaI	TGATCA	1 cut(s)	1864
Fnu4HI	GCNGC	5 cut(s)	501, 543, 1206, 1209, 1218
FokI	GGATG	2 cut(s)	1801, 1945
FriOI	GRGCYC	1 cut(s)	2071
Fsp4HI	GCNGC	5 cut(s)	501, 543, 1206, 1209, 1218
FspBI	CTAG	4 cut(s)	330, 1061, 1130, 2106
FspI	TGCGCA	2 cut(s)	1212, 1905
GlaI	GCGC	5 cut(s)	1212, 1381, 1480, 1905, 1984
GluI	GCNGC	5 cut(s)	501, 543, 1206, 1209, 1218
GsuI	CTGGAG	2 cut(s)	702, 870
HaeII	RGCGCY	1 cut(s)	1986
HaeIII	GGCC	9 cut(s)	80, 118, 349, 612, 984, 996, 1002, 1011, 1487
HapII	CCGG	5 cut(s)	17, 87, 993, 1476, 1728
HgaI	GACGC	1 cut(s)	1379
HhaI	GCGC	5 cut(s)	1213, 1382, 1481, 1906, 1985
Hin1I	GRCGYC	2 cut(s)	1390, 1983
Hin6I	GCGC	5 cut(s)	1211, 1380, 1479, 1904, 1983
HinP1I	GCGC	5 cut(s)	1211, 1380, 1479, 1904, 1983
HincII	GTYRAC	1 cut(s)	230
HindII	GTYRAC	1 cut(s)	230
HinfI	GANTC	5 cut(s)	575, 586, 700, 727, 2054
HpaII	CCGG	5 cut(s)	17, 87, 993, 1476, 1728
HphI	GGTGA	5 cut(s)	389, 581, 778, 1088, 1541
Hpy166II	GTNNAC	4 cut(s)	230, 646, 1148, 1164
Hpy188I	TCNGA	4 cut(s)	398, 549, 1411, 1843
Hpy8I	GTNNAC	4 cut(s)	230, 646, 1148, 1164
HpyAV	CCTTC	2 cut(s)	1725, 2165
HpyCH4III	ACNGT	3 cut(s)	275, 1346, 1633
HpyCH4IV	ACGT	4 cut(s)	648, 1031, 2029, 2131
HpyF10VI	GCNNNNNNNGC	7 cut(s)	485, 770, 1008, 1214, 1217, 1478, 1493
HpyF3I	CTNAG	8 cut(s)	111, 254, 305, 765, 1283, 1774, 2100, 2191
HpySE526I	ACGT	4 cut(s)	648, 1031, 2029, 2131
Hsp92I	GRCGYC	2 cut(s)	1390, 1983
HspAI	GCGC	5 cut(s)	1211, 1380, 1479, 1904, 1983
KasI	GGCGCC	1 cut(s)	1982
Ksp22I	TGATCA	1 cut(s)	1864
LmnI	GCTCC	4 cut(s)	550, 770, 1938, 2095
Lsp1109I	GCAGC	5 cut(s)	487, 529, 1192, 1195, 1229
LweI	GCATC	7 cut(s)	145, 449, 646, 1101, 1285, 1297, 1967
MaeI	CTAG	4 cut(s)	330, 1061, 1130, 2106
MaeII	ACGT	4 cut(s)	648, 1031, 2029, 2131
MaeIII	GTNAC	7 cut(s)	654, 844, 917, 1563, 1627, 1876, 2143
MboII	GAAGA	2 cut(s)	1762, 2179
MfeI	CAATTG	2 cut(s)	480, 934
MflI	RGATCY	8 cut(s)	49, 135, 195, 688, 733, 838, 1020, 1073
MhlI	GDGCHC	5 cut(s)	220, 280, 337, 1954, 2071
MlsI	TGGCCA	1 cut(s)	349
MluNI	TGGCCA	1 cut(s)	349
Mly113I	GGCGCC	1 cut(s)	1983
MmeI	TCCRAC	2 cut(s)	1271, 1808
Mox20I	TGGCCA	1 cut(s)	349
Mph1103I	ATGCAT	1 cut(s)	1615
MscI	TGGCCA	1 cut(s)	349
MseI	TTAA	8 cut(s)	30, 506, 663, 1056, 1079, 1923, 2009, 2081
MslI	CAYNNNNRTG	6 cut(s)	153, 180, 1104, 1226, 1293, 1608
Msp20I	TGGCCA	1 cut(s)	349
MspA1I	CMGCKG	1 cut(s)	2025
MspI	CCGG	5 cut(s)	17, 87, 993, 1476, 1728
MspR9I	CCNGG	7 cut(s)	87, 338, 908, 998, 1476, 1491, 1728
MunI	CAATTG	2 cut(s)	480, 934
MvaI	CCWGG	4 cut(s)	338, 908, 998, 1491
MvnI	CGCG	4 cut(s)	1293, 1382, 1675, 1938
MwoI	GCNNNNNNNGC	7 cut(s)	485, 770, 1008, 1214, 1217, 1478, 1493
NarI	GGCGCC	1 cut(s)	1983
NciI	CCSGG	3 cut(s)	87, 1476, 1728
NdeI	CATATG	2 cut(s)	1101, 1173
NmuCI	GTSAC	2 cut(s)	917, 1627
NruI	TCGCGA	1 cut(s)	1293
NsbI	TGCGCA	2 cut(s)	1212, 1905
NsiI	ATGCAT	1 cut(s)	1615
NspI	RCATGY	4 cut(s)	925, 1043, 1217, 1746
PaeI	GCATGC	2 cut(s)	1043, 1217
PagI	TCATGA	1 cut(s)	712
PceI	AGGCCT	2 cut(s)	612, 1011
PciI	ACATGT	1 cut(s)	921
PcsI	WCGNNNNNNNCGW	1 cut(s)	1672
PfeI	GAWTC	5 cut(s)	575, 586, 700, 727, 2054
PflFI	GACNNNGTC	1 cut(s)	87
PflMI	CCANNNNNTGG	3 cut(s)	848, 2064, 2178
PkrI	GCNGC	5 cut(s)	502, 544, 1207, 1210, 1219
PluTI	GGCGCC	1 cut(s)	1986
Ppu21I	YACGTR	1 cut(s)	649
PscI	ACATGT	1 cut(s)	921
PshBI	ATTAAT	1 cut(s)	1923
Psp6I	CCWGG	4 cut(s)	336, 906, 996, 1489
PspGI	CCWGG	4 cut(s)	336, 906, 996, 1489
PspPI	GGNCC	7 cut(s)	78, 116, 326, 983, 1000, 1486, 1724
PstNI	CAGNNNCTG	1 cut(s)	848
PsuI	RGATCY	8 cut(s)	49, 135, 195, 688, 733, 838, 1020, 1073
PsyI	GACNNNGTC	1 cut(s)	87
RruI	TCGCGA	1 cut(s)	1293
RsaI	GTAC	4 cut(s)	475, 645, 1147, 1599
RsaNI	GTAC	4 cut(s)	474, 644, 1146, 1598
RseI	CAYNNNNRTG	6 cut(s)	153, 180, 1104, 1226, 1293, 1608
SaqAI	TTAA	8 cut(s)	30, 506, 663, 1056, 1079, 1923, 2009, 2081
SatI	GCNGC	5 cut(s)	501, 543, 1206, 1209, 1218
Sau96I	GGNCC	7 cut(s)	78, 116, 326, 983, 1000, 1486, 1724
ScrFI	CCNGG	7 cut(s)	87, 338, 908, 998, 1476, 1491, 1728
SduI	GDGCHC	5 cut(s)	220, 280, 337, 1954, 2071
SfaNI	GCATC	7 cut(s)	145, 449, 646, 1101, 1285, 1297, 1967
SfcI	CTRYAG	1 cut(s)	2136
SfiI	GGCCNNNNNGGCC	1 cut(s)	1008
SfoI	GGCGCC	1 cut(s)	1984
SinI	GGWCC	2 cut(s)	326, 1724
SmiMI	CAYNNNNRTG	6 cut(s)	153, 180, 1104, 1226, 1293, 1608
SmlI	CTYRAG	2 cut(s)	97, 2113
SmoI	CTYRAG	2 cut(s)	97, 2113
SphI	GCATGC	2 cut(s)	1043, 1217
SseBI	AGGCCT	2 cut(s)	612, 1011
SspDI	GGCGCC	1 cut(s)	1982
SspI	AATATT	2 cut(s)	369, 1815
SspMI	CTAG	4 cut(s)	330, 1061, 1130, 2106
StuI	AGGCCT	2 cut(s)	612, 1011
StyD4I	CCNGG	7 cut(s)	85, 336, 906, 996, 1474, 1489, 1726
StyI	CCWWGG	2 cut(s)	613, 2125
TaaI	ACNGT	3 cut(s)	275, 1346, 1633
TaiI	ACGT	4 cut(s)	651, 1034, 2032, 2134
TaqI	TCGA	4 cut(s)	69, 168, 202, 1255
TaqII	GACCGA	1 cut(s)	881
TatI	WGTACW	2 cut(s)	473, 643
TfiI	GAWTC	5 cut(s)	575, 586, 700, 727, 2054
Tru1I	TTAA	8 cut(s)	30, 506, 663, 1056, 1079, 1923, 2009, 2081
Tru9I	TTAA	8 cut(s)	30, 506, 663, 1056, 1079, 1923, 2009, 2081
TscAI	CASTG	2 cut(s)	187, 1548
TseFI	GTSAC	2 cut(s)	917, 1627
TseI	GCWGC	5 cut(s)	500, 542, 1205, 1208, 1217
Tsp45I	GTSAC	2 cut(s)	917, 1627
TspDTI	ATGAA	7 cut(s)	309, 471, 729, 1146, 1352, 1598, 1613
TspRI	CASTG	2 cut(s)	187, 1548
Tth111I	GACNNNGTC	1 cut(s)	87
Van91I	CCANNNNNTGG	3 cut(s)	848, 2064, 2178
VpaK11BI	GGWCC	2 cut(s)	326, 1724
VspI	ATTAAT	1 cut(s)	1923
XapI	RAATTY	3 cut(s)	33, 716, 812
XceI	RCATGY	4 cut(s)	925, 1043, 1217, 1746
XspI	CTAG	4 cut(s)	330, 1061, 1130, 2106
Zsp2I	ATGCAT	1 cut(s)	1615

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.