PPR repeat
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom02g13060 |
| rosa_laevigata | RLG00000001550 |
| rosa_roxburghii | Rroxscaffold_7G00195240 |
| rosa_samantha | Rh1DG155100 Rh2CG444000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 183 |
| AcsI | RAATTY | 2 cut(s) | 258, 280 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 130, 183 |
| AluBI | AGCT | 1 cut(s) | 233 |
| AluI | AGCT | 1 cut(s) | 233 |
| Alw26I | GTCTC | 2 cut(s) | 20, 259 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 29 |
| ApoI | RAATTY | 2 cut(s) | 258, 280 |
| AseI | ATTAAT | 1 cut(s) | 65 |
| AspA2I | CCTAGG | 1 cut(s) | 124 |
| AspLEI | GCGC | 1 cut(s) | 41 |
| AvrII | CCTAGG | 1 cut(s) | 124 |
| BccI | CCATC | 3 cut(s) | 22, 26, 247 |
| BcoDI | GTCTC | 2 cut(s) | 20, 259 |
| BfaI | CTAG | 2 cut(s) | 114, 125 |
| BfoI | RGCGCY | 1 cut(s) | 42 |
| BlnI | CCTAGG | 1 cut(s) | 124 |
| BmsI | GCATC | 2 cut(s) | 29, 127 |
| BsaJI | CCNNGG | 1 cut(s) | 124 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 130, 183 |
| Bse3DI | GCAATG | 1 cut(s) | 295 |
| BseDI | CCNNGG | 1 cut(s) | 124 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 130, 183 |
| BseMI | GCAATG | 1 cut(s) | 295 |
| BseMII | CTCAG | 1 cut(s) | 66 |
| BseRI | GAGGAG | 1 cut(s) | 235 |
| BslFI | GGGAC | 1 cut(s) | 40 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 130, 183 |
| BsmAI | GTCTC | 2 cut(s) | 20, 259 |
| BsmFI | GGGAC | 1 cut(s) | 40 |
| BsmI | GAATGC | 1 cut(s) | 178 |
| BspCNI | CTCAG | 1 cut(s) | 67 |
| BsrDI | GCAATG | 1 cut(s) | 295 |
| BssECI | CCNNGG | 1 cut(s) | 124 |
| BssT1I | CCWWGG | 1 cut(s) | 124 |
| BstC8I | GCNNGC | 1 cut(s) | 72 |
| BstDEI | CTNAG | 1 cut(s) | 75 |
| BstH2I | RGCGCY | 1 cut(s) | 42 |
| BstHHI | GCGC | 1 cut(s) | 41 |
| BstMAI | GTCTC | 2 cut(s) | 20, 259 |
| Cac8I | GCNNGC | 1 cut(s) | 72 |
| CaiI | CAGNNNCTG | 1 cut(s) | 29 |
| CfoI | GCGC | 1 cut(s) | 41 |
| CviAII | CATG | 2 cut(s) | 46, 193 |
| CviJI | RGCY | 3 cut(s) | 74, 205, 233 |
| CviKI_1 | RGCY | 3 cut(s) | 74, 205, 233 |
| DdeI | CTNAG | 1 cut(s) | 75 |
| Eco130I | CCWWGG | 1 cut(s) | 124 |
| EcoT14I | CCWWGG | 1 cut(s) | 124 |
| ErhI | CCWWGG | 1 cut(s) | 124 |
| FaeI | CATG | 2 cut(s) | 49, 196 |
| FaiI | YATR | 4 cut(s) | 47, 95, 111, 194 |
| FaqI | GGGAC | 1 cut(s) | 40 |
| FatI | CATG | 2 cut(s) | 45, 192 |
| FspBI | CTAG | 2 cut(s) | 114, 125 |
| GlaI | GCGC | 1 cut(s) | 40 |
| HaeII | RGCGCY | 1 cut(s) | 42 |
| HhaI | GCGC | 1 cut(s) | 41 |
| Hin1II | CATG | 2 cut(s) | 49, 196 |
| Hin6I | GCGC | 1 cut(s) | 39 |
| HinP1I | GCGC | 1 cut(s) | 39 |
| HindIII | AAGCTT | 1 cut(s) | 231 |
| Hpy166II | GTNNAC | 1 cut(s) | 186 |
| Hpy188I | TCNGA | 1 cut(s) | 25 |
| Hpy8I | GTNNAC | 1 cut(s) | 186 |
| HpyCH4V | TGCA | 2 cut(s) | 70, 140 |
| HpyF3I | CTNAG | 1 cut(s) | 75 |
| Hsp92II | CATG | 2 cut(s) | 49, 196 |
| HspAI | GCGC | 1 cut(s) | 39 |
| LpnPI | CCDG | 3 cut(s) | 56, 150, 224 |
| LweI | GCATC | 2 cut(s) | 29, 127 |
| MaeI | CTAG | 2 cut(s) | 114, 125 |
| MaeIII | GTNAC | 1 cut(s) | 9 |
| MboII | GAAGA | 2 cut(s) | 146, 181 |
| MluCI | AATT | 2 cut(s) | 258, 280 |
| MnlI | CCTC | 3 cut(s) | 69, 213, 220 |
| MseI | TTAA | 2 cut(s) | 65, 284 |
| Mva1269I | GAATGC | 1 cut(s) | 178 |
| NlaIII | CATG | 2 cut(s) | 49, 196 |
| PctI | GAATGC | 1 cut(s) | 178 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 183 |
| PshBI | ATTAAT | 1 cut(s) | 65 |
| PstNI | CAGNNNCTG | 1 cut(s) | 29 |
| SaqAI | TTAA | 2 cut(s) | 65, 284 |
| SetI | ASST | 2 cut(s) | 126, 235 |
| SfaNI | GCATC | 2 cut(s) | 29, 127 |
| Sse9I | AATT | 2 cut(s) | 258, 280 |
| SspMI | CTAG | 2 cut(s) | 114, 125 |
| StyI | CCWWGG | 1 cut(s) | 124 |
| TasI | AATT | 2 cut(s) | 258, 280 |
| Tru1I | TTAA | 2 cut(s) | 65, 284 |
| Tru9I | TTAA | 2 cut(s) | 65, 284 |
| TspDTI | ATGAA | 1 cut(s) | 306 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 183 |
| VspI | ATTAAT | 1 cut(s) | 65 |
| XapI | RAATTY | 2 cut(s) | 258, 280 |
| XmaJI | CCTAGG | 1 cut(s) | 124 |
| XspI | CTAG | 2 cut(s) | 114, 125 |