RLG00000001741

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
19967580 .. 19968450
871 bp
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UTR
Exon/CDS
Intron
RLM00000001741

Sequence Viewer

Length: 456 bp
ATGCCGGTGTCCTATATGGAGATGAACAAGACTGCTTTGCATTTAGTTGGGGATGATGGTTTGCAGTGGAGGATTTTAGTACAGTATATAAGATACTATATCAGACAATGCTATAGTGGCAGTGAAGAAGATCACAAGTTTGGGAGAGCGAGGGAAGATGAAATTTTGCACCAAGACAGAGCAACAGTCAGAAGCGTCCACCATTGCAATCTGGCTAAGTTGAGAGGTTTCTGCATCCATGGGAAACAATGCTTTCTGGTTCATGAGTATATGAATAGAGGTTCGCTGGAGAAGATCGATCCTTTTTGGTTATTAGAATGGCCGAAGTGGTATGAAATAACAGTTGGAATGGCAAGAGGACTTGCTTACTTGCGTAAGGGTTGTAAACGTAAGATCATCCACTGTGACATCAAGCTGGGGAACACTCTTTTACATGATGATTGCAAGTCAAGATAG

Protein Analysis

152

Amino Acids

17.91

Weight (kDa)

8.97

Isoelectric Point (pI)

43.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 53 - 147 2.6e-10 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 54 - 146 2e-09 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0021496)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 293
AcoI YGGCCR 1 cut(s) 320
AcsI RAATTY 1 cut(s) 162
AfaI GTAC 1 cut(s) 81
AjuI GAANNNNNNNTTGG 2 cut(s) 327, 359
AluBI AGCT 1 cut(s) 415
AluI AGCT 1 cut(s) 415
AlwI GGATC 1 cut(s) 293
AoxI GGCC 1 cut(s) 320
ApoI RAATTY 1 cut(s) 162
BccI CCATC 1 cut(s) 50
BfmI CTRYAG 1 cut(s) 112
BmsI GCATC 1 cut(s) 243
BpmI CTGGAG 1 cut(s) 308
Bsa29I ATCGAT 1 cut(s) 297
BsaJI CCNNGG 1 cut(s) 238
Bse118I RCCGGY 1 cut(s) 4
Bse3DI GCAATG 1 cut(s) 202
BseCI ATCGAT 1 cut(s) 297
BseDI CCNNGG 1 cut(s) 238
BseGI GGATG 3 cut(s) 58, 234, 396
BseMI GCAATG 1 cut(s) 202
BseYI CCCAGC 1 cut(s) 415
BshFI GGCC 1 cut(s) 322
BshVI ATCGAT 1 cut(s) 297
BsiSI CCGG 1 cut(s) 5
BsnI GGCC 1 cut(s) 322
Bsp143I GATC 4 cut(s) 130, 294, 298, 393
Bsp19I CCATGG 1 cut(s) 238
BspANI GGCC 1 cut(s) 322
BspDI ATCGAT 1 cut(s) 297
BspHI TCATGA 1 cut(s) 262
BspPI GGATC 1 cut(s) 293
BsrDI GCAATG 1 cut(s) 202
BsrFI RCCGGY 1 cut(s) 4
BssAI RCCGGY 1 cut(s) 4
BssECI CCNNGG 1 cut(s) 238
BssMI GATC 4 cut(s) 130, 294, 298, 393
BssT1I CCWWGG 1 cut(s) 238
Bst4CI ACNGT 4 cut(s) 84, 187, 343, 404
BstDEI CTNAG 1 cut(s) 216
BstDSI CCRYGG 1 cut(s) 238
BstF5I GGATG 3 cut(s) 58, 234, 396
BstKTI GATC 4 cut(s) 133, 297, 301, 396
BstMBI GATC 4 cut(s) 130, 294, 298, 393
BstMWI GCNNNNNNNGC 1 cut(s) 117
BstSFI CTRYAG 1 cut(s) 112
Bsu15I ATCGAT 1 cut(s) 297
BsuRI GGCC 1 cut(s) 322
BsuTUI ATCGAT 1 cut(s) 297
BtgI CCRYGG 1 cut(s) 238
BtsCI GGATG 3 cut(s) 58, 234, 396
BtsI GCAGTG 2 cut(s) 71, 127
BtsIMutI CAGTG 3 cut(s) 71, 127, 400
CciI TCATGA 1 cut(s) 262
Cfr10I RCCGGY 1 cut(s) 4
ClaI ATCGAT 1 cut(s) 297
CseI GACGC 1 cut(s) 184
Csp6I GTAC 1 cut(s) 80
CviAII CATG 3 cut(s) 239, 263, 434
CviJI RGCY 3 cut(s) 215, 322, 415
CviKI_1 RGCY 3 cut(s) 215, 322, 415
CviQI GTAC 1 cut(s) 80
DdeI CTNAG 1 cut(s) 216
DpnI GATC 4 cut(s) 132, 296, 300, 395
DpnII GATC 4 cut(s) 130, 294, 298, 393
EaeI YGGCCR 1 cut(s) 320
Eco130I CCWWGG 1 cut(s) 238
EcoT14I CCWWGG 1 cut(s) 238
ErhI CCWWGG 1 cut(s) 238
FaeI CATG 3 cut(s) 242, 266, 437
FatI CATG 3 cut(s) 238, 262, 433
FokI GGATG 3 cut(s) 65, 221, 383
GsaI CCCAGC 1 cut(s) 419
GsuI CTGGAG 1 cut(s) 308
HaeIII GGCC 1 cut(s) 322
HapII CCGG 1 cut(s) 5
HgaI GACGC 1 cut(s) 184
Hin1II CATG 3 cut(s) 242, 266, 437
HpaII CCGG 1 cut(s) 5
Hpy166II GTNNAC 2 cut(s) 199, 386
Hpy188I TCNGA 2 cut(s) 104, 191
Hpy188III TCNNGA 2 cut(s) 263, 450
Hpy8I GTNNAC 2 cut(s) 199, 386
HpyCH4III ACNGT 4 cut(s) 84, 187, 343, 404
HpyCH4IV ACGT 1 cut(s) 388
HpyCH4V TGCA 6 cut(s) 40, 64, 169, 207, 234, 444
HpyF10VI GCNNNNNNNGC 1 cut(s) 117
HpyF3I CTNAG 1 cut(s) 216
HpySE526I ACGT 1 cut(s) 388
Hsp92II CATG 3 cut(s) 242, 266, 437
Kzo9I GATC 4 cut(s) 130, 294, 298, 393
LpnPI CCDG 5 cut(s) 18, 197, 242, 272, 401
LweI GCATC 1 cut(s) 243
MaeII ACGT 1 cut(s) 388
MaeIII GTNAC 1 cut(s) 404
MalI GATC 4 cut(s) 132, 296, 300, 395
MboI GATC 4 cut(s) 130, 294, 298, 393
MboII GAAGA 4 cut(s) 137, 140, 167, 304
MluCI AATT 1 cut(s) 162
MmeI TCCRAC 1 cut(s) 325
MnlI CCTC 5 cut(s) 63, 144, 218, 272, 350
MspI CCGG 1 cut(s) 5
MwoI GCNNNNNNNGC 1 cut(s) 117
NcoI CCATGG 1 cut(s) 238
NdeII GATC 4 cut(s) 130, 294, 298, 393
NlaIII CATG 3 cut(s) 242, 266, 437
NmuCI GTSAC 1 cut(s) 404
PagI TCATGA 1 cut(s) 262
PspFI CCCAGC 1 cut(s) 415
RsaI GTAC 1 cut(s) 81
RsaNI GTAC 1 cut(s) 80
Sau3AI GATC 4 cut(s) 130, 294, 298, 393
SetI ASST 4 cut(s) 229, 283, 391, 417
SfaNI GCATC 1 cut(s) 243
SfcI CTRYAG 1 cut(s) 112
Sse9I AATT 1 cut(s) 162
StyI CCWWGG 1 cut(s) 238
TaaI ACNGT 4 cut(s) 84, 187, 343, 404
TaiI ACGT 1 cut(s) 391
TaqI TCGA 1 cut(s) 297
TasI AATT 1 cut(s) 162
TatI WGTACW 1 cut(s) 79
TscAI CASTG 3 cut(s) 71, 127, 407
TseFI GTSAC 1 cut(s) 404
Tsp45I GTSAC 1 cut(s) 404
TspDTI ATGAA 5 cut(s) 38, 174, 251, 287, 348
TspRI CASTG 3 cut(s) 71, 127, 407
XapI RAATTY 1 cut(s) 162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.