Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0016843

Physical Location & Seq

Genomic Coordinates Reverse (-)

57998868 .. 58001762

Gene Structure 2895 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004287

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2895 bp

ATGGGTGGCACTGAAATGTCTCATTTCATGCTGTTTCTTGCAATACTTCATTCCATTCTTGCTGTTGCTCCTGGAGATAATTCGAGAGACTCCAGCCGTCTTCTGAGAATCAAATCAGAACTTGTAGATCCATCAGGAGTTCTGAACAACTGGTCTCCAAGAGCTCATATATGCAGTTGGAATGGCCTTGAATGTTCAAATGATCAGATGCATATTATTGGTCTGAACCTATCTGGATCAGGACTATCAGGTTCCATCCCACATGAGCTTTGGAACCTCACTTCAATCCAAACACTTGATTTGTCATCAAATTCCTTCACCGGCTCACTTCCACCTGAGCTCCGCCAGCTTCAAAATCTTAAAGCACTTCTCCTATTCTCCAATTTTCTCTCCGGTGAGATTCCTGAGGAAATAGGTGCTTTGAAGAACTTGCAAGTTCTAAGAATAGGAGATAACATGATATCAGGTGCGATTCCACCAAGCATTGGCAACTTGACTGACTTGAGAGTGTTGGGGCTTGCCTATTGCCAATTAAATGGAAGCATTCCAGTTGAAATTGGTAATTTGAAGCATCTAATATCCCTTGACTTGCAGAACAATAGTCTCAGTGGCCTCATACCAGAAGAGATTCATGGCTGCGAGGAGCTTGAGAACTTTGCAGCATCCAACAACAAGCTTGAAGGAGACATCCCTTTGATGGGATCACTTAAATCACTGCAAATTCTCAACCTGGCCAACAACAGCGTTTCTGGATCAATTCCTACCGCATTAAGTCAGCTCCACAATTTGAAGTACTTGAATCTGCTTGGAAACAGATTGAGTGGTGCCATTCCTTCGGAGCTTAACCAGTTGGTTCAACTTGAGATGCTTGACTTATCAAGGAACAATATCTCAGGAAGCATACAACTGCTCAGCACACAATTAAAGAATCTTGCAGCTTTGGTTCTGTCTGATAATGCTTTGACAGGCAGCGTTCCAACCAACTTCTGCATAAGAGGTTCTTCAAATCTTCGACAACTTCTTCTGGCTCGAAACAAGCTCTCTGGAGAGTTTCCTTTGGCAGTGCTGAGCTGTTCCTCTCTCCAACAGCTAGATCTTTCAGATAATCATTTTGGAGGGGAACTACCTACTTCCCTGGACAAACTAGGGAATCTCACAGATCTTGTGCTCAACAATAACAGCTTCACAGGAACTCTACTTCCTGAAATCGGAAACTTGAGTTCCTTGGAAAATCTGTTTCTGTTTCACAACATGATCACAGGTGGAATTCCTGTGGAGATAGGAAAGCTGCAGAGGCTGAAAACCATCTACCTTTACGACAACCAGATGTCAGGACCGATACCAAGTGAGTTAACCAACTGCTCAAGCTTGACAGCAATTGATTTCTTTGGCAACCGTTTCTCAGGCTCCATCCCCGCCACAATCGGAAAACTCAAGAACCTTTTTCTGCTCCAGCTGAGGCAGAATGACTTGTCTGGTCCTATTCCACCAAGCTTAGGCTACTGCAGAAGCCTTCAGTTATTGGCCTTAGCTGATAACAAGCTCTCAGGAACATTGCCACCCACATTCAGATTCATTTCCCAACTAAGCACCATTACTCTTTACAACAACTCCTTTCAAGGCCCTCTTCCTCAATCTCTTTTTCTTCTCAAAAACCTCAAGATCATAAATTTCTCTCACAATCGGTTGAGTGGAACCATCTTCCCTCTCTCTGGTTCAAGTTATCTGACAGCAATGGACTTGACCAACAATAGCTTTTCGGGTTCCATCCCTTCTGGACTTTCCATGTGCAGAAATTTAACCCGTCTCCGCCTTGCACATAATCACCTCACTGGCACCATGCCTTCCGAATTTGGCCAACTCACACAGCTCAACTTTCTTGACTTGTCATTCAACAACCTCACAGATGAAATCCCGCCTCAGTTGTCTTCTTGTAAGAAACTTGAGCATTTCTTAGTTAACAATAACCAATTCACAGGAGCAATACCTCCATGGTTAGGTAGTTTTCAAGAACTAGGAGAACTAGACTTGTCGTCTAACAACTTTCATGGAACAGTACCTCCAGAGCTTGGAAACTGTTCAAAACTACTCAAGCTTTCTCTGCATGACAACAGTCTCTCCAGTATTATCCCAGCGGAGATAGGAAATCTCACTTCTCTCAATGTCCTAAATCTTCAGAGAAACAATTTTTCGGGGCCTATTCCATCGACAATCCAGAACTGCAAGAAGCTCTATGAACTGAGGCTGTCAGAGAACTTGTTGACAGGCTTGATCCCATATGAGCTTGGAGAGTTAACCGAGCTGCAAGTAATCCTGGATCTAAGCACAAACTTGTTCTCCGGTGAAATCCCATCTTCTCTAGGAGATCTAATGAAGTTGGAGAGACTGAACCTCTCTTTCAATCAGCTCCAAGGAAGAGTTCCTGATTCACTTGGGAAGCTGACCAGTCTTCACATGTTGAACCTGTCAAATAATCATCTTGAGGGCCAAATCCCTTCAACCTTTTCAGGATTCCCACTGAGCTCTTTCTTAGGTAATGATCACAAGCTTTGCGGCCCACCATTAGCATCGTGTGGGGAATCTGAGGCCCAGAAGGTAAAGCGCCTTTCACCTACTGCAGCAACTGGTATTACAGTGGCCATTGTGTTAACTTCCACAGCAATATGCTTGGTGATGATTTACATCATGCTGAGGATATGGTGCAAGTGGAGAAAAGTTCTGATTTCAAACTCGGATGCTTCTGGTGGAAAAGAAGAGGAGAAATGGGGATTTGGGAATGAGAAGAAGAGGGTTGGTGAGTACTGGAAAGTGAATTCTGTGGCGCAGGTGCCTTCAGAAACTGCAGAAATGAAGAAACAGAATAATGCATCATTCTACATCACCACCTCAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001704 GO:0001706 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006810 GO:0006833 GO:0006950 GO:0007275 GO:0007369 GO:0007389 GO:0007492 GO:0008104 GO:0008150 GO:0009505 GO:0009531 GO:0009611 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0009987 GO:0010154 GO:0010453 GO:0010470 GO:0016020 GO:0022414 GO:0022603 GO:0030104 GO:0030154 GO:0030312 GO:0032501 GO:0032502 GO:0033036 GO:0035987 GO:0042044 GO:0042592 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045184 GO:0045595 GO:0045995 GO:0048226 GO:0048316 GO:0048598 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0051302 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0061458 GO:0065001 GO:0065007 GO:0065008 GO:0071944 GO:0090558 GO:0090708 GO:0098771 GO:0099402 GO:1903224 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8

Protein Analysis

965

Amino Acids

104.96

Weight (kDa)

6.13

Isoelectric Point (pI)

35.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	28 - 66	1.3e-08	Leucine rich repeat N-terminal domain
LRR_14	PF23598	75 - 149	5.3e-07	Leucine-rich repeat region
LRR_14	PF23598	161 - 263	1.9e-09	Leucine-rich repeat region
LRR_8	PF13855	238 - 297	1.3e-07	Leucine rich repeat
LRR_14	PF23598	336 - 439	1.8e-07	Leucine-rich repeat region
LRR_14	PF23598	568 - 702	1.4e-06	Leucine-rich repeat region
LRR_8	PF13855	575 - 634	2.5e-06	Leucine rich repeat
LRR_8	PF13855	598 - 658	2.3e-06	Leucine rich repeat
LRR_14	PF23598	666 - 826	8.2e-13	Leucine-rich repeat region
LRR_8	PF13855	671 - 730	5.3e-06	Leucine rich repeat
LRR_8	PF13855	771 - 827	4.2e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0016843)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g05610
malus_domestica	MD06G1171800.v1.1
prunus_persica	Prupe.5G170700_v2.0.a1 Prupe.5G170700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0193201
rosa_laevigata	RLG00000004287
rosa_multiflora	Rmu_ssc0000092.1_g000027
rosa_roxburghii	Rroxscaffold_3G00262290
rosa_rugosa	Rorug07G0008300
rosa_samantha	Rh7AG133700 Rh7BG134700 Rh7CG137600 Rh7DG135700
rosa_wichuraiana	Rw7G011430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2815
Acc36I	ACCTGC	1 cut(s)	2815
AccB1I	GGYRCC	3 cut(s)	824, 1835, 2827
AccB7I	CCANNNNNTGG	2 cut(s)	485, 2069
AciI	CCGC	7 cut(s)	343, 765, 1416, 1810, 1916, 2135, 2553
AclWI	GGATC	6 cut(s)	122, 244, 709, 760, 2266, 2325
AcoI	YGGCCR	3 cut(s)	732, 1855, 2637
AcsI	RAATTY	7 cut(s)	310, 720, 1266, 1669, 1795, 1850, 2812
AcuI	CTGAAG	3 cut(s)	1499, 2159, 2817
AfaI	GTAC	3 cut(s)	794, 2058, 2801
AfiI	CCNNNNNNNGG	8 cut(s)	485, 697, 698, 1208, 1496, 1712, 1997, 2069
AflIII	ACRYGT	1 cut(s)	2454
AhdI	GACNNNNNGTC	1 cut(s)	2032
AjnI	CCWGG	4 cut(s)	70, 729, 1134, 2313
AjuI	GAANNNNNNNTTGG	2 cut(s)	2403, 2435
AloI	GAACNNNNNNTCC	4 cut(s)	1183, 1215, 2044, 2076
Alw21I	GWGCWC	4 cut(s)	166, 342, 1170, 2525
Alw26I	GTCTC	8 cut(s)	24, 81, 159, 608, 678, 1811, 2120, 2377
AlwI	GGATC	6 cut(s)	122, 244, 709, 760, 2266, 2325
AlwNI	CAGNNNCTG	3 cut(s)	1297, 2624, 2840
ApeKI	GCWGC	7 cut(s)	636, 659, 935, 969, 1288, 2302, 2618
ApoI	RAATTY	7 cut(s)	310, 720, 1266, 1669, 1795, 1850, 2812
Asp700I	GAANNNNTTC	2 cut(s)	627, 2077
AspLEI	GCGC	2 cut(s)	2604, 2824
AspS9I	GGNCC	7 cut(s)	1334, 1478, 1622, 2195, 2485, 2555, 2587
AsuHPI	GGTGA	8 cut(s)	310, 407, 1817, 2354, 2601, 2683, 2807, 2872
AvaII	GGWCC	2 cut(s)	1334, 1478
AxyI	CCTNAGG	1 cut(s)	405
BalI	TGGCCA	3 cut(s)	734, 1857, 2639
BanI	GGYRCC	3 cut(s)	824, 1835, 2827
BanII	GRGCYC	3 cut(s)	166, 342, 2525
BbsI	GAAGAC	3 cut(s)	92, 1920, 2441
Bbv12I	GWGCWC	4 cut(s)	166, 342, 1170, 2525
BbvCI	CCTCAGC	2 cut(s)	1457, 2690
BbvI	GCAGC	7 cut(s)	623, 671, 947, 981, 1275, 2289, 2630
BccI	CCATC	9 cut(s)	139, 263, 691, 1313, 1418, 1706, 1775, 2212, 2359
BceAI	ACGGC	1 cut(s)	81
BciT130I	CCWGG	4 cut(s)	72, 731, 1136, 2315
BclI	TGATCA	3 cut(s)	202, 1254, 2539
BcoDI	GTCTC	8 cut(s)	24, 81, 159, 608, 678, 1811, 2120, 2377
BfaI	CTAG	5 cut(s)	1091, 1145, 2015, 2024, 2360
BfmI	CTRYAG	4 cut(s)	1289, 1504, 2616, 2841
BfoI	RGCGCY	1 cut(s)	2605
BfuAI	ACCTGC	1 cut(s)	2815
BglII	AGATCT	3 cut(s)	1093, 1159, 2365
BisI	GCNGC	8 cut(s)	637, 660, 936, 970, 1289, 2303, 2554, 2619
BlpI	GCTNAGC	2 cut(s)	911, 1067
BlsI	GCNGC	8 cut(s)	638, 661, 937, 971, 1290, 2304, 2555, 2620
BmcAI	AGTACT	2 cut(s)	794, 2801
Bme1390I	CCNGG	4 cut(s)	72, 731, 1136, 2315
Bme18I	GGWCC	2 cut(s)	1334, 1478
BmeRI	GACNNNNNGTC	1 cut(s)	2032
BmgT120I	GGNCC	7 cut(s)	1334, 1478, 1622, 2195, 2485, 2555, 2587
BmiI	GGNNCC	9 cut(s)	253, 275, 826, 1408, 1696, 1765, 1837, 2196, 2829
BmrFI	CCNGG	4 cut(s)	72, 731, 1136, 2315
BmsI	GCATC	7 cut(s)	198, 580, 671, 855, 2576, 2725, 2876
BoxI	GACNNNNGTC	1 cut(s)	2112
BpiI	GAAGAC	3 cut(s)	92, 1920, 2441
BpmI	CTGGAG	6 cut(s)	76, 93, 1065, 1436, 2046, 2104
Bpu10I	CCTNAGC	5 cut(s)	336, 1457, 1495, 1528, 2690
Bpu1102I	GCTNAGC	2 cut(s)	911, 1067
BsaBI	GATNNNNATC	1 cut(s)	2681
BsaI	GGTCTC	1 cut(s)	159
BsaJI	CCNNGG	4 cut(s)	1134, 1224, 1991, 2410
BsaWI	WCCGGW	2 cut(s)	392, 2339
Bsc4I	CCNNNNNNNGG	8 cut(s)	485, 697, 698, 1208, 1496, 1712, 1997, 2069
Bse118I	RCCGGY	1 cut(s)	320
Bse1I	ACTGG	8 cut(s)	155, 548, 847, 1837, 2121, 2445, 2629, 2807
Bse21I	CCTNAGG	1 cut(s)	405
Bse3DI	GCAATG	2 cut(s)	1553, 1740
Bse8I	GATNNNNATC	1 cut(s)	2681
BseBI	CCWGG	4 cut(s)	72, 731, 1136, 2315
BseDI	CCNNGG	4 cut(s)	1134, 1224, 1991, 2410
BseGI	GGATG	6 cut(s)	255, 662, 687, 1410, 1767, 2740
BseJI	GATNNNNATC	1 cut(s)	2681
BseLI	CCNNNNNNNGG	8 cut(s)	485, 697, 698, 1208, 1496, 1712, 1997, 2069
BseMI	GCAATG	2 cut(s)	1553, 1740
BseNI	ACTGG	8 cut(s)	155, 548, 847, 1837, 2121, 2445, 2629, 2807
BseRI	GAGGAG	2 cut(s)	656, 2771
BseXI	GCAGC	7 cut(s)	623, 671, 947, 981, 1275, 2289, 2630
BseYI	CCCAGC	1 cut(s)	2131
BsgI	GTGCAG	1 cut(s)	1810
BshNI	GGYRCC	3 cut(s)	824, 1835, 2827
BsiHKAI	GWGCWC	4 cut(s)	166, 342, 1170, 2525
BsiSI	CCGG	3 cut(s)	321, 393, 2340
BslI	CCNNNNNNNGG	8 cut(s)	485, 697, 698, 1208, 1496, 1712, 1997, 2069
BsmAI	GTCTC	8 cut(s)	24, 81, 159, 608, 678, 1811, 2120, 2377
BsmBI	CGTCTC	1 cut(s)	1811
BsmI	GAATGC	1 cut(s)	543
Bso31I	GGTCTC	1 cut(s)	159
Bsp1286I	GDGCHC	4 cut(s)	166, 342, 1170, 2525
Bsp1720I	GCTNAGC	2 cut(s)	911, 1067
Bsp19I	CCATGG	1 cut(s)	1991
BspACI	CCGC	7 cut(s)	343, 765, 1416, 1810, 1916, 2135, 2553
BspLI	GGNNCC	9 cut(s)	253, 275, 826, 1408, 1696, 1765, 1837, 2196, 2829
BspMAI	CTGCAG	4 cut(s)	1293, 1508, 2620, 2845
BspMI	ACCTGC	1 cut(s)	2815
BspPI	GGATC	6 cut(s)	122, 244, 709, 760, 2266, 2325
BspT107I	GGYRCC	3 cut(s)	824, 1835, 2827
BspTNI	GGTCTC	1 cut(s)	159
BsrDI	GCAATG	2 cut(s)	1553, 1740
BsrFI	RCCGGY	1 cut(s)	320
BsrI	ACTGG	8 cut(s)	155, 548, 847, 1837, 2121, 2445, 2629, 2807
BssAI	RCCGGY	1 cut(s)	320
BssECI	CCNNGG	4 cut(s)	1134, 1224, 1991, 2410
BssT1I	CCWWGG	3 cut(s)	1224, 1991, 2410
Bst2UI	CCWGG	4 cut(s)	72, 731, 1136, 2315
Bst4CI	ACNGT	5 cut(s)	1397, 2056, 2078, 2114, 2635
Bst6I	CTCTTC	5 cut(s)	618, 1632, 2410, 2748, 2780
BstC8I	GCNNGC	2 cut(s)	347, 519
BstDSI	CCRYGG	1 cut(s)	1991
BstF5I	GGATG	6 cut(s)	255, 662, 687, 1410, 1767, 2740
BstH2I	RGCGCY	1 cut(s)	2605
BstHHI	GCGC	2 cut(s)	2604, 2824
BstMAI	GTCTC	8 cut(s)	24, 81, 159, 608, 678, 1811, 2120, 2377
BstMWI	GCNNNNNNNGC	3 cut(s)	346, 1294, 2101
BstNI	CCWGG	4 cut(s)	72, 731, 1136, 2315
BstNSI	RCATGY	1 cut(s)	2458
BstPAI	GACNNNNGTC	1 cut(s)	2112
BstSCI	CCNGG	4 cut(s)	70, 729, 1134, 2313
BstSFI	CTRYAG	4 cut(s)	1289, 1504, 2616, 2841
BstV1I	GCAGC	7 cut(s)	623, 671, 947, 981, 1275, 2289, 2630
BstV2I	GAAGAC	3 cut(s)	92, 1920, 2441
BstX2I	RGATCY	5 cut(s)	127, 1093, 1159, 2317, 2365
BstXI	CCANNNNNNTGG	1 cut(s)	536
BstYI	RGATCY	5 cut(s)	127, 1093, 1159, 2317, 2365
Bsu36I	CCTNAGG	1 cut(s)	405
BtgI	CCRYGG	1 cut(s)	1991
BtsCI	GGATG	6 cut(s)	255, 662, 687, 1410, 1767, 2740
BtsI	GCAGTG	2 cut(s)	713, 1068
BtsIMutI	CAGTG	7 cut(s)	9, 613, 713, 1068, 1830, 2516, 2640
BveI	ACCTGC	1 cut(s)	2815
Cac8I	GCNNGC	2 cut(s)	347, 519
CaiI	CAGNNNCTG	3 cut(s)	1297, 2624, 2840
CfoI	GCGC	2 cut(s)	2604, 2824
Cfr10I	RCCGGY	1 cut(s)	320
Cfr13I	GGNCC	7 cut(s)	1334, 1478, 1622, 2195, 2485, 2555, 2587
Csp6I	GTAC	3 cut(s)	793, 2057, 2800
CviQI	GTAC	3 cut(s)	793, 2057, 2800
DriI	GACNNNNNGTC	1 cut(s)	2032
EaeI	YGGCCR	3 cut(s)	732, 1855, 2637
Eam1104I	CTCTTC	5 cut(s)	618, 1632, 2410, 2748, 2780
Eam1105I	GACNNNNNGTC	1 cut(s)	2032
EarI	CTCTTC	5 cut(s)	618, 1632, 2410, 2748, 2780
EciI	GGCGGA	2 cut(s)	332, 1799
Ecl136II	GAGCTC	3 cut(s)	164, 340, 2523
Eco130I	CCWWGG	3 cut(s)	1224, 1991, 2410
Eco24I	GRGCYC	3 cut(s)	166, 342, 2525
Eco31I	GGTCTC	1 cut(s)	159
Eco32I	GATATC	1 cut(s)	462
Eco47I	GGWCC	2 cut(s)	1334, 1478
Eco53kI	GAGCTC	3 cut(s)	164, 340, 2523
Eco57I	CTGAAG	3 cut(s)	1499, 2159, 2817
Eco81I	CCTNAGG	1 cut(s)	405
EcoICRI	GAGCTC	3 cut(s)	164, 340, 2523
EcoO109I	RGGNCCY	2 cut(s)	1622, 2195
EcoRI	GAATTC	2 cut(s)	1266, 2812
EcoRII	CCWGG	4 cut(s)	70, 729, 1134, 2313
EcoRV	GATATC	1 cut(s)	462
EcoT14I	CCWWGG	3 cut(s)	1224, 1991, 2410
EcoT22I	ATGCAT	2 cut(s)	213, 2869
EcoT38I	GRGCYC	3 cut(s)	166, 342, 2525
ErhI	CCWWGG	3 cut(s)	1224, 1991, 2410
Esp3I	CGTCTC	1 cut(s)	1811
FalI	AAGNNNNNCTT	4 cut(s)	985, 1017, 1611, 1643
FauI	CCCGC	2 cut(s)	1423, 1923
FauNDI	CATATG	1 cut(s)	2278
FbaI	TGATCA	3 cut(s)	202, 1254, 2539
Fnu4HI	GCNGC	8 cut(s)	637, 660, 936, 970, 1289, 2303, 2554, 2619
FokI	GGATG	6 cut(s)	242, 649, 674, 1397, 1754, 2747
FriOI	GRGCYC	3 cut(s)	166, 342, 2525
Fsp4HI	GCNGC	8 cut(s)	637, 660, 936, 970, 1289, 2303, 2554, 2619
FspBI	CTAG	5 cut(s)	1091, 1145, 2015, 2024, 2360
GlaI	GCGC	2 cut(s)	2603, 2823
GluI	GCNGC	8 cut(s)	637, 660, 936, 970, 1289, 2303, 2554, 2619
GsaI	CCCAGC	1 cut(s)	2135
GsuI	CTGGAG	6 cut(s)	76, 93, 1065, 1436, 2046, 2104
HaeII	RGCGCY	1 cut(s)	2605
HapII	CCGG	3 cut(s)	321, 393, 2340
HhaI	GCGC	2 cut(s)	2604, 2824
Hin6I	GCGC	2 cut(s)	2602, 2822
HinP1I	GCGC	2 cut(s)	2602, 2822
HincII	GTYRAC	5 cut(s)	1353, 1960, 2262, 2295, 2649
HindII	GTYRAC	5 cut(s)	1353, 1960, 2262, 2295, 2649
HindIII	AAGCTT	5 cut(s)	674, 1366, 1492, 2093, 2546
HpaI	GTTAAC	4 cut(s)	1353, 1960, 2295, 2649
HpaII	CCGG	3 cut(s)	321, 393, 2340
HphI	GGTGA	8 cut(s)	310, 407, 1817, 2354, 2601, 2683, 2807, 2872
Hpy166II	GTNNAC	5 cut(s)	1353, 1960, 2262, 2295, 2649
Hpy8I	GTNNAC	5 cut(s)	1353, 1960, 2262, 2295, 2649
HpyAV	CCTTC	9 cut(s)	325, 674, 843, 1523, 1782, 1854, 2505, 2587, 2841
HpyCH4III	ACNGT	5 cut(s)	1397, 2056, 2078, 2114, 2635
HpyF10VI	GCNNNNNNNGC	3 cut(s)	346, 1294, 2101
HspAI	GCGC	2 cut(s)	2602, 2822
Ksp22I	TGATCA	3 cut(s)	202, 1254, 2539
KspAI	GTTAAC	4 cut(s)	1353, 1960, 2295, 2649
LmnI	GCTCC	9 cut(s)	73, 345, 643, 783, 838, 1412, 1455, 1979, 2412
Lsp1109I	GCAGC	7 cut(s)	623, 671, 947, 981, 1275, 2289, 2630
LweI	GCATC	7 cut(s)	198, 580, 671, 855, 2576, 2725, 2876
MaeI	CTAG	5 cut(s)	1091, 1145, 2015, 2024, 2360
MfeI	CAATTG	1 cut(s)	1377
MflI	RGATCY	5 cut(s)	127, 1093, 1159, 2317, 2365
MhlI	GDGCHC	4 cut(s)	166, 342, 1170, 2525
MlsI	TGGCCA	3 cut(s)	734, 1857, 2639
MluNI	TGGCCA	3 cut(s)	734, 1857, 2639
MlyI	GAGTC	1 cut(s)	83
MmeI	TCCRAC	5 cut(s)	158, 690, 1001, 1108, 2358
Mox20I	TGGCCA	3 cut(s)	734, 1857, 2639
Mph1103I	ATGCAT	2 cut(s)	213, 2869
MroXI	GAANNNNTTC	2 cut(s)	627, 2077
MscI	TGGCCA	3 cut(s)	734, 1857, 2639
MslI	CAYNNNNRTG	1 cut(s)	14
Msp20I	TGGCCA	3 cut(s)	734, 1857, 2639
MspA1I	CMGCKG	2 cut(s)	1456, 2135
MspI	CCGG	3 cut(s)	321, 393, 2340
MspR9I	CCNGG	4 cut(s)	72, 731, 1136, 2315
MunI	CAATTG	1 cut(s)	1377
Mva1269I	GAATGC	1 cut(s)	543
MvaI	CCWGG	4 cut(s)	72, 731, 1136, 2315
MwoI	GCNNNNNNNGC	3 cut(s)	346, 1294, 2101
NcoI	CCATGG	1 cut(s)	1991
NdeI	CATATG	1 cut(s)	2278
NlaIV	GGNNCC	9 cut(s)	253, 275, 826, 1408, 1696, 1765, 1837, 2196, 2829
NsiI	ATGCAT	2 cut(s)	213, 2869
NspI	RCATGY	1 cut(s)	2458
PaqCI	CACCTGC	1 cut(s)	2815
PciI	ACATGT	1 cut(s)	2454
PctI	GAATGC	1 cut(s)	543
PdmI	GAANNNNTTC	2 cut(s)	627, 2077
PflMI	CCANNNNNTGG	2 cut(s)	485, 2069
PfoI	TCCNGGA	2 cut(s)	70, 2313
PkrI	GCNGC	8 cut(s)	638, 661, 937, 971, 1290, 2304, 2555, 2620
PleI	GAGTC	1 cut(s)	83
PpsI	GAGTC	1 cut(s)	83
PscI	ACATGT	1 cut(s)	2454
PshAI	GACNNNNGTC	1 cut(s)	2112
Psp124BI	GAGCTC	3 cut(s)	166, 342, 2525
Psp6I	CCWGG	4 cut(s)	70, 729, 1134, 2313
PspFI	CCCAGC	1 cut(s)	2131
PspGI	CCWGG	4 cut(s)	70, 729, 1134, 2313
PspN4I	GGNNCC	9 cut(s)	253, 275, 826, 1408, 1696, 1765, 1837, 2196, 2829
PspPI	GGNCC	7 cut(s)	1334, 1478, 1622, 2195, 2485, 2555, 2587
PstI	CTGCAG	4 cut(s)	1293, 1508, 2620, 2845
PstNI	CAGNNNCTG	3 cut(s)	1297, 2624, 2840
PsuI	RGATCY	5 cut(s)	127, 1093, 1159, 2317, 2365
PvuII	CAGCTG	1 cut(s)	1456
RsaI	GTAC	3 cut(s)	794, 2058, 2801
RsaNI	GTAC	3 cut(s)	793, 2057, 2800
RseI	CAYNNNNRTG	1 cut(s)	14
SacI	GAGCTC	3 cut(s)	166, 342, 2525
SatI	GCNGC	8 cut(s)	637, 660, 936, 970, 1289, 2303, 2554, 2619
Sau96I	GGNCC	7 cut(s)	1334, 1478, 1622, 2195, 2485, 2555, 2587
ScaI	AGTACT	2 cut(s)	794, 2801
SchI	GAGTC	1 cut(s)	83
ScrFI	CCNGG	4 cut(s)	72, 731, 1136, 2315
SduI	GDGCHC	4 cut(s)	166, 342, 1170, 2525
SfaNI	GCATC	7 cut(s)	198, 580, 671, 855, 2576, 2725, 2876
SfcI	CTRYAG	4 cut(s)	1289, 1504, 2616, 2841
SinI	GGWCC	2 cut(s)	1334, 1478
SmiMI	CAYNNNNRTG	1 cut(s)	14
SsiI	CCGC	7 cut(s)	343, 765, 1416, 1810, 1916, 2135, 2553
SspMI	CTAG	5 cut(s)	1091, 1145, 2015, 2024, 2360
SstI	GAGCTC	3 cut(s)	166, 342, 2525
StyD4I	CCNGG	4 cut(s)	70, 729, 1134, 2313
StyI	CCWWGG	3 cut(s)	1224, 1991, 2410
TaaI	ACNGT	5 cut(s)	1397, 2056, 2078, 2114, 2635
TaqI	TCGA	4 cut(s)	83, 1012, 1030, 2207
TaqII	GACCGA	1 cut(s)	1351
TatI	WGTACW	2 cut(s)	792, 2799
TauI	GCSGC	1 cut(s)	2556
TscAI	CASTG	7 cut(s)	16, 613, 720, 1068, 1837, 2523, 2640
TseI	GCWGC	7 cut(s)	636, 659, 935, 969, 1288, 2302, 2618
TspDTI	ATGAA	9 cut(s)	16, 38, 620, 1564, 1923, 2036, 2250, 2387, 2864
TspRI	CASTG	7 cut(s)	16, 613, 720, 1068, 1837, 2523, 2640
Van91I	CCANNNNNTGG	2 cut(s)	485, 2069
VpaK11BI	GGWCC	2 cut(s)	1334, 1478
XapI	RAATTY	7 cut(s)	310, 720, 1266, 1669, 1795, 1850, 2812
XceI	RCATGY	1 cut(s)	2458
XcmI	CCANNNNNNNNNTGG	1 cut(s)	267
XmnI	GAANNNNTTC	2 cut(s)	627, 2077
XspI	CTAG	5 cut(s)	1091, 1145, 2015, 2024, 2360
ZrmI	AGTACT	2 cut(s)	794, 2801
Zsp2I	ATGCAT	2 cut(s)	213, 2869

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.