Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0016843

Physical Location & Seq

Genomic Coordinates Forward (+)

10035979 .. 10040001

Gene Structure 4023 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG134700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2913 bp

ATGCATTTTGTGATGGGTGGCACTGAAATGTCTCATTTCATGCTGTTTCTTGCAATAGTACTTCATTCCATTCTTGCTGTTGCTTCTGGAGATAATTCGAGAGACTCCAGCCGTCTTCTGAGAATCAAATCAGAACTCGTAGATCCATCAGGAGTTCTGAACAACTGGTCTCCAAGAGCTCATATATGCAGTTGGAATGGCCTTGAATGTTCAAATGATCAGATGCATATTATTAGTCTGAACCTATCTGGATCAGGACTATCAGGTTCCATCCCACATGAGCTTTGGAACCTCACTTCAATCCAAACACTTGATTTGTCATCAAATTTCTTCACCGGCTCACTTCCACCTGAGCTCCGCCAGCTTCAAAATCTTAAAGCACTTCTCCTATTCTCCAATTTTCTCTCCGGTGAGATTCCTGAGGAAATAGGTGCTTTGAAGAACTTGCAAGTTCTAAGAATAGGAGATAACATGATATCAGGTGTGATTCCACCAAGCATTGGCAACTTGACTGACTTGAGAGTGTTGGGGCTTGCCTATTGCCAATTAAATGGAAGCATTCCAGTTGAAATTGGTAATTTGAAGCATCTAATATCTCTTGACTTGCAGAACAATAGTCTCAGTGGCCTCATACCAGAAGAGATTCATGGCTGCGAAGAGCTTGAGGACTTTGCAGCATCAAACAACAAGCTTGAAGGAGACATCCCTTTGATGGAATCACTTAAATCACTGCAAATTCTCAACCTGGCCAACAACAGCCTTTCTGGATCAATTCCTACCGCATTAAGTCAGCTCCACAATTTGAAGTACTTGAATCTGCTTGGAAACAGATTGAGTGGCGCCATTCCTTCGGAGCTTAACCAGTTGGTTCAACTTGAGATGCTTGACTTATCAAGGAACAATCTCTCAGGCAGCATACAACTTCTGATCAGCACACAATTAAAGAATCTTGCAGCTTTGGTTCTGTCTGATAATGCTTTGACAGGTAGCATTCCAACCAACTTCTGCATAAGAGGTTCTTCAAATCTTCGACAACTTCTTCTGGCTCGAAACAAGCTCTCTGGAGAGTTTCCTTTGGCAGTGCTGAGCTGTTCCTCGCTCCAACAGCTAGATCTTTCAGATAATCATTTTGGAGGGGAACTACCTACTTCCCTGGACAAATTAGGGAATCTCACAGATCTTGTGCTCAACAATAACAGCTTCACAGGAACTCTACTTCCTGAAATCGGAAACTTGAGTTCCTTGGAAAATCTGTTTCTGTTTCACAACATGATCACAGGTGGAATTCCGGTGGAGATAGGAAAGCTGCAGAGGCTGAAAACCATCTACCTTTACGACAACCAGATGTCAGGACCGATACCAAGTGAGTTAACCAACTGCTCAAGCTTGACAGCAATTGATTTCTTTGGCAACCGTTTCTCAGGCTCCATCCCCGCCACCATCGGAAAACTCAAGAACCTTTTTTTGCTCCAGCTGAGGCAGAATGACTTGTCTGGTCCTATTCCACCAAGCTTAGGCTACTGCAGAAGCCTTCAGTTGTTGGCCTTAGCTGATAACAAGCTCTCAGGAACCTTGCCACCCACATTCAGATTCATTTCCCAACTAAGCACCATTACTCTTTACAACAACTCCTTTCAAGGCCCTCTTCCTCAATCTCTTTTTCTTCTCAAAAACCTCAAGATCATAAATTTCTCTCACAATCGGTTTAGTGGAACCATCTTCCCTCTCTCTGGTTCAAGTTATCTGACAGCAATGGACTTGACCAACAATAGCTTTTCGGGTTCCATCCCTTCTGGACTTTCCATGTGCAGAAATTTAACCCGTCTCCGCCTTGCACATAATCACCTCACTGGCACCATGCCTTCCGAATTTGACCAACTCACACAGCTCAACTTTCTTGACTTGTCATTCAACAACCTCACAGATGAAATCCCGCCTCAGTTGTCTTCTTGTAAGAAACTTGATCATTTCTTAGTTAACAATAACCAATTCACAGGAGCAATACCTCCATGGTTAGGTAGTTTTCAAGAACTAGGAGAACTAGACTTGTCGTCTAACAACTTTCATGGAACAGTACCTCCAGAGCTTGGAAACTGTTCAAAACTACTCAAGCTTTCTCTGCATGACAACAGTCTCTCCAGTATTATCCCAGCGGAGATAGGAAATCTCACTTCTCTCAATGTCCTAAATCTTCAGAGAAACAATTTTTCGGGGTCTATTCCATCGACAATCCAGAACTGCAAGAAGCTCTATGAACTGAGGCTGTCAGAGAACTTGTTGACAGGTTTGATCCCATATGAGCTTGGAGAGTTAACCGAGCTGCAAGTAATCCTGGATCTAAGCACAAACTTGTTCTCCGGTGAAATCCCATCTTCTCTAGGAGATCTAATGAAGCTGGAGAGACTGAACCTCTCTTTCAATCAGCTCCAAGGAAGAGTTCCTGCTTCACTTGGGAAGCTGACCAGTCTTCACATGTTGAACCTGTCAAATAATCATCTTGAGGGCCAAATCCCTTCAACCTTTTCAGGATTCCCACTGAGCTCTTTCTTAGGTAATGATCACAAGCTTTGCGGCCCACCATTAGCATCGTGTGGGGAATCTGAGGCCCAGAAGGTAAAGCGCCTTTCACGTACTGCAGCAACTTGTATTACAGTGGCCATAGTGTTAACTTCCACAGCAATATGCTTGGTGATGATTTACATCATGCTGAGGATATGGTGCAAGTGGAGAAAAGTTTTGATTTCAAACTCGGATGCTTCTGGTGGAAAAGAAGAGGAGAAATGGGGATTTGGGAATGAGAAGAAGAGGGTTGGTGAGTACTGGAAAGTGAATTCTGTGGCGCAGGTGCCTTCAGAAACTGCAGAAATGAAGAAACAGAATAATGCATCATTCTACACCACCACCTCAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001704 GO:0001706 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006810 GO:0006833 GO:0006950 GO:0007275 GO:0007369 GO:0007389 GO:0007492 GO:0008104 GO:0008150 GO:0009505 GO:0009531 GO:0009611 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0009987 GO:0010154 GO:0010453 GO:0010470 GO:0016020 GO:0022414 GO:0022603 GO:0030104 GO:0030154 GO:0030312 GO:0032501 GO:0032502 GO:0033036 GO:0035987 GO:0042044 GO:0042592 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045184 GO:0045595 GO:0045995 GO:0048226 GO:0048316 GO:0048598 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0051302 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0061458 GO:0065001 GO:0065007 GO:0065008 GO:0071944 GO:0090558 GO:0090708 GO:0098771 GO:0099402 GO:1903224 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8

Protein Analysis

970

Amino Acids

106.01

Weight (kDa)

6.09

Isoelectric Point (pI)

35.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	33 - 71	1.3e-08	Leucine rich repeat N-terminal domain
LRR_14	PF23598	77 - 154	1.5e-06	Leucine-rich repeat region
LRR_14	PF23598	166 - 249	1.3e-07	Leucine-rich repeat region
LRR_8	PF13855	243 - 302	1.6e-07	Leucine rich repeat
LRR_14	PF23598	342 - 444	2.5e-07	Leucine-rich repeat region
LRR_8	PF13855	581 - 640	8.5e-07	Leucine rich repeat
LRR_8	PF13855	604 - 664	7.1e-06	Leucine rich repeat
LRR_14	PF23598	672 - 832	6.4e-13	Leucine-rich repeat region
LRR_8	PF13855	677 - 736	5e-06	Leucine rich repeat
LRR_8	PF13855	777 - 833	7.9e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0016843)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g05610
malus_domestica	MD06G1171800.v1.1
prunus_persica	Prupe.5G170700_v2.0.a1 Prupe.5G170700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0193201
rosa_laevigata	RLG00000004287
rosa_multiflora	Rmu_ssc0000092.1_g000027
rosa_roxburghii	Rroxscaffold_3G00262290
rosa_rugosa	Rorug07G0008300
rosa_samantha	Rh7AG133700 Rh7BG134700 Rh7CG137600 Rh7DG135700
rosa_wichuraiana	Rw7G011430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2833
Acc36I	ACCTGC	1 cut(s)	2833
AccB1I	GGYRCC	3 cut(s)	839, 1853, 2845
AccB7I	CCANNNNNTGG	2 cut(s)	500, 2087
AciI	CCGC	7 cut(s)	358, 780, 1434, 1828, 1934, 2153, 2571
AclWI	GGATC	5 cut(s)	137, 259, 775, 2284, 2343
AcoI	YGGCCR	2 cut(s)	747, 2655
AcsI	RAATTY	7 cut(s)	325, 735, 1284, 1687, 1813, 1868, 2830
AcuI	CTGAAG	3 cut(s)	1517, 2177, 2835
AcyI	GRCGYC	1 cut(s)	840
AfaI	GTAC	5 cut(s)	60, 809, 2076, 2632, 2819
AfiI	CCNNNNNNNGG	7 cut(s)	500, 712, 1226, 1514, 1730, 2015, 2087
AflIII	ACRYGT	1 cut(s)	2472
AhdI	GACNNNNNGTC	1 cut(s)	2050
AjnI	CCWGG	3 cut(s)	744, 1152, 2331
AjuI	GAANNNNNNNTTGG	2 cut(s)	2421, 2453
AloI	GAACNNNNNNTCC	4 cut(s)	1201, 1233, 2062, 2094
Alw21I	GWGCWC	4 cut(s)	181, 357, 1188, 2543
Alw26I	GTCTC	8 cut(s)	36, 96, 174, 623, 693, 1829, 2138, 2395
AlwI	GGATC	5 cut(s)	137, 259, 775, 2284, 2343
AlwNI	CAGNNNCTG	2 cut(s)	1315, 2858
AoxI	GGCC	9 cut(s)	199, 625, 747, 1542, 1639, 2503, 2572, 2604, 2655
ApeKI	GCWGC	7 cut(s)	651, 674, 912, 953, 1306, 2320, 2636
ApoI	RAATTY	7 cut(s)	325, 735, 1284, 1687, 1813, 1868, 2830
Asp700I	GAANNNNTTC	2 cut(s)	642, 2095
AspLEI	GCGC	3 cut(s)	842, 2622, 2842
AspS9I	GGNCC	6 cut(s)	1352, 1496, 1640, 2503, 2573, 2605
AsuHPI	GGTGA	6 cut(s)	325, 422, 1835, 2372, 2701, 2825
AvaII	GGWCC	2 cut(s)	1352, 1496
AxyI	CCTNAGG	1 cut(s)	420
BalI	TGGCCA	2 cut(s)	749, 2657
BanI	GGYRCC	3 cut(s)	839, 1853, 2845
BanII	GRGCYC	3 cut(s)	181, 357, 2543
BbsI	GAAGAC	3 cut(s)	107, 1938, 2459
Bbv12I	GWGCWC	4 cut(s)	181, 357, 1188, 2543
BbvCI	CCTCAGC	2 cut(s)	1475, 2708
BbvI	GCAGC	7 cut(s)	638, 686, 924, 965, 1293, 2307, 2648
BceAI	ACGGC	1 cut(s)	96
BciT130I	CCWGG	3 cut(s)	746, 1154, 2333
BclI	TGATCA	5 cut(s)	217, 927, 1272, 1963, 2557
BcoDI	GTCTC	8 cut(s)	36, 96, 174, 623, 693, 1829, 2138, 2395
BfaI	CTAG	4 cut(s)	1109, 2033, 2042, 2378
BfmI	CTRYAG	4 cut(s)	1307, 1522, 2634, 2859
BfoI	RGCGCY	2 cut(s)	843, 2623
BfuAI	ACCTGC	1 cut(s)	2833
BglII	AGATCT	3 cut(s)	1111, 1177, 2383
BisI	GCNGC	8 cut(s)	652, 675, 913, 954, 1307, 2321, 2572, 2637
BlpI	GCTNAGC	1 cut(s)	1085
BlsI	GCNGC	8 cut(s)	653, 676, 914, 955, 1308, 2322, 2573, 2638
BmcAI	AGTACT	3 cut(s)	60, 809, 2819
Bme1390I	CCNGG	3 cut(s)	746, 1154, 2333
Bme18I	GGWCC	2 cut(s)	1352, 1496
BmeRI	GACNNNNNGTC	1 cut(s)	2050
BmgT120I	GGNCC	6 cut(s)	1352, 1496, 1640, 2503, 2573, 2605
BmiI	GGNNCC	9 cut(s)	268, 290, 841, 1426, 1570, 1714, 1783, 1855, 2847
BmrFI	CCNGG	3 cut(s)	746, 1154, 2333
BmsI	GCATC	7 cut(s)	213, 595, 686, 870, 2594, 2743, 2894
BoxI	GACNNNNGTC	1 cut(s)	2130
BpiI	GAAGAC	3 cut(s)	107, 1938, 2459
BpmI	CTGGAG	7 cut(s)	91, 108, 1083, 1454, 2064, 2122, 2417
Bpu10I	CCTNAGC	5 cut(s)	351, 1475, 1513, 1546, 2708
Bpu1102I	GCTNAGC	1 cut(s)	1085
BpuEI	CTTGAG	9 cut(s)	538, 683, 896, 1255, 1366, 1436, 1661, 2093, 2519
BsaAI	YACGTR	1 cut(s)	2630
BsaBI	GATNNNNATC	1 cut(s)	2699
BsaHI	GRCGYC	1 cut(s)	840
BsaI	GGTCTC	1 cut(s)	174
BsaJI	CCNNGG	4 cut(s)	1152, 1242, 2009, 2428
BsaWI	WCCGGW	3 cut(s)	407, 1288, 2357
Bsc4I	CCNNNNNNNGG	7 cut(s)	500, 712, 1226, 1514, 1730, 2015, 2087
Bse118I	RCCGGY	1 cut(s)	335
Bse1I	ACTGG	7 cut(s)	170, 563, 862, 1855, 2139, 2463, 2825
Bse21I	CCTNAGG	1 cut(s)	420
Bse3DI	GCAATG	1 cut(s)	1758
Bse8I	GATNNNNATC	1 cut(s)	2699
BseBI	CCWGG	3 cut(s)	746, 1154, 2333
BseDI	CCNNGG	4 cut(s)	1152, 1242, 2009, 2428
BseGI	GGATG	5 cut(s)	270, 702, 1428, 1785, 2758
BseJI	GATNNNNATC	1 cut(s)	2699
BseLI	CCNNNNNNNGG	7 cut(s)	500, 712, 1226, 1514, 1730, 2015, 2087
BseMI	GCAATG	1 cut(s)	1758
BseNI	ACTGG	7 cut(s)	170, 563, 862, 1855, 2139, 2463, 2825
BseRI	GAGGAG	1 cut(s)	2789
BseXI	GCAGC	7 cut(s)	638, 686, 924, 965, 1293, 2307, 2648
BseYI	CCCAGC	1 cut(s)	2149
BsgI	GTGCAG	1 cut(s)	1828
BshFI	GGCC	9 cut(s)	201, 627, 749, 1544, 1641, 2505, 2574, 2606, 2657
BshNI	GGYRCC	3 cut(s)	839, 1853, 2845
BsiHKAI	GWGCWC	4 cut(s)	181, 357, 1188, 2543
BsiSI	CCGG	4 cut(s)	336, 408, 1289, 2358
BslI	CCNNNNNNNGG	7 cut(s)	500, 712, 1226, 1514, 1730, 2015, 2087
BsmAI	GTCTC	8 cut(s)	36, 96, 174, 623, 693, 1829, 2138, 2395
BsmBI	CGTCTC	1 cut(s)	1829
BsmI	GAATGC	2 cut(s)	558, 990
BsnI	GGCC	9 cut(s)	201, 627, 749, 1544, 1641, 2505, 2574, 2606, 2657
Bso31I	GGTCTC	1 cut(s)	174
Bsp1286I	GDGCHC	4 cut(s)	181, 357, 1188, 2543
Bsp1720I	GCTNAGC	1 cut(s)	1085
Bsp19I	CCATGG	1 cut(s)	2009
BspACI	CCGC	7 cut(s)	358, 780, 1434, 1828, 1934, 2153, 2571
BspANI	GGCC	9 cut(s)	201, 627, 749, 1544, 1641, 2505, 2574, 2606, 2657
BspLI	GGNNCC	9 cut(s)	268, 290, 841, 1426, 1570, 1714, 1783, 1855, 2847
BspMAI	CTGCAG	4 cut(s)	1311, 1526, 2638, 2863
BspMI	ACCTGC	1 cut(s)	2833
BspPI	GGATC	5 cut(s)	137, 259, 775, 2284, 2343
BspQI	GCTCTTC	1 cut(s)	651
BspT107I	GGYRCC	3 cut(s)	839, 1853, 2845
BspTNI	GGTCTC	1 cut(s)	174
BsrDI	GCAATG	1 cut(s)	1758
BsrFI	RCCGGY	1 cut(s)	335
BsrI	ACTGG	7 cut(s)	170, 563, 862, 1855, 2139, 2463, 2825
BssAI	RCCGGY	1 cut(s)	335
BssECI	CCNNGG	4 cut(s)	1152, 1242, 2009, 2428
BssNI	GRCGYC	1 cut(s)	840
BssT1I	CCWWGG	3 cut(s)	1242, 2009, 2428
Bst2UI	CCWGG	3 cut(s)	746, 1154, 2333
Bst4CI	ACNGT	5 cut(s)	1415, 2074, 2096, 2132, 2653
Bst6I	CTCTTC	6 cut(s)	633, 651, 1650, 2428, 2766, 2798
BstACI	GRCGYC	1 cut(s)	840
BstBAI	YACGTR	1 cut(s)	2630
BstC8I	GCNNGC	2 cut(s)	362, 534
BstDSI	CCRYGG	1 cut(s)	2009
BstF5I	GGATG	5 cut(s)	270, 702, 1428, 1785, 2758
BstH2I	RGCGCY	2 cut(s)	843, 2623
BstHHI	GCGC	3 cut(s)	842, 2622, 2842
BstMAI	GTCTC	8 cut(s)	36, 96, 174, 623, 693, 1829, 2138, 2395
BstMWI	GCNNNNNNNGC	4 cut(s)	361, 1105, 1312, 2119
BstNI	CCWGG	3 cut(s)	746, 1154, 2333
BstNSI	RCATGY	1 cut(s)	2476
BstPAI	GACNNNNGTC	1 cut(s)	2130
BstSCI	CCNGG	3 cut(s)	744, 1152, 2331
BstSFI	CTRYAG	4 cut(s)	1307, 1522, 2634, 2859
BstV1I	GCAGC	7 cut(s)	638, 686, 924, 965, 1293, 2307, 2648
BstV2I	GAAGAC	3 cut(s)	107, 1938, 2459
BstX2I	RGATCY	5 cut(s)	142, 1111, 1177, 2335, 2383
BstXI	CCANNNNNNTGG	1 cut(s)	551
BstYI	RGATCY	5 cut(s)	142, 1111, 1177, 2335, 2383
Bsu36I	CCTNAGG	1 cut(s)	420
BsuRI	GGCC	9 cut(s)	201, 627, 749, 1544, 1641, 2505, 2574, 2606, 2657
BtgI	CCRYGG	1 cut(s)	2009
BtsCI	GGATG	5 cut(s)	270, 702, 1428, 1785, 2758
BtsI	GCAGTG	2 cut(s)	728, 1086
BtsIMutI	CAGTG	7 cut(s)	21, 628, 728, 1086, 1848, 2534, 2658
BveI	ACCTGC	1 cut(s)	2833
Cac8I	GCNNGC	2 cut(s)	362, 534
CaiI	CAGNNNCTG	2 cut(s)	1315, 2858
CfoI	GCGC	3 cut(s)	842, 2622, 2842
Cfr10I	RCCGGY	1 cut(s)	335
Cfr13I	GGNCC	6 cut(s)	1352, 1496, 1640, 2503, 2573, 2605
Csp6I	GTAC	5 cut(s)	59, 808, 2075, 2631, 2818
CviQI	GTAC	5 cut(s)	59, 808, 2075, 2631, 2818
DinI	GGCGCC	1 cut(s)	841
DriI	GACNNNNNGTC	1 cut(s)	2050
EaeI	YGGCCR	2 cut(s)	747, 2655
Eam1104I	CTCTTC	6 cut(s)	633, 651, 1650, 2428, 2766, 2798
Eam1105I	GACNNNNNGTC	1 cut(s)	2050
EarI	CTCTTC	6 cut(s)	633, 651, 1650, 2428, 2766, 2798
EciI	GGCGGA	2 cut(s)	347, 1817
Ecl136II	GAGCTC	3 cut(s)	179, 355, 2541
Eco130I	CCWWGG	3 cut(s)	1242, 2009, 2428
Eco24I	GRGCYC	3 cut(s)	181, 357, 2543
Eco31I	GGTCTC	1 cut(s)	174
Eco32I	GATATC	1 cut(s)	477
Eco47I	GGWCC	2 cut(s)	1352, 1496
Eco53kI	GAGCTC	3 cut(s)	179, 355, 2541
Eco57I	CTGAAG	3 cut(s)	1517, 2177, 2835
Eco81I	CCTNAGG	1 cut(s)	420
EcoICRI	GAGCTC	3 cut(s)	179, 355, 2541
EcoO109I	RGGNCCY	1 cut(s)	1640
EcoRI	GAATTC	2 cut(s)	1284, 2830
EcoRII	CCWGG	3 cut(s)	744, 1152, 2331
EcoRV	GATATC	1 cut(s)	477
EcoT14I	CCWWGG	3 cut(s)	1242, 2009, 2428
EcoT22I	ATGCAT	3 cut(s)	6, 228, 2887
EcoT38I	GRGCYC	3 cut(s)	181, 357, 2543
EgeI	GGCGCC	1 cut(s)	841
EheI	GGCGCC	1 cut(s)	841
ErhI	CCWWGG	3 cut(s)	1242, 2009, 2428
Esp3I	CGTCTC	1 cut(s)	1829
FalI	AAGNNNNNCTT	4 cut(s)	1003, 1035, 1629, 1661
FauI	CCCGC	2 cut(s)	1441, 1941
FauNDI	CATATG	1 cut(s)	2296
FbaI	TGATCA	5 cut(s)	217, 927, 1272, 1963, 2557
Fnu4HI	GCNGC	8 cut(s)	652, 675, 913, 954, 1307, 2321, 2572, 2637
FokI	GGATG	5 cut(s)	257, 689, 1415, 1772, 2765
FriOI	GRGCYC	3 cut(s)	181, 357, 2543
Fsp4HI	GCNGC	8 cut(s)	652, 675, 913, 954, 1307, 2321, 2572, 2637
FspBI	CTAG	4 cut(s)	1109, 2033, 2042, 2378
GlaI	GCGC	3 cut(s)	841, 2621, 2841
GluI	GCNGC	8 cut(s)	652, 675, 913, 954, 1307, 2321, 2572, 2637
GsaI	CCCAGC	1 cut(s)	2153
GsuI	CTGGAG	7 cut(s)	91, 108, 1083, 1454, 2064, 2122, 2417
HaeII	RGCGCY	2 cut(s)	843, 2623
HaeIII	GGCC	9 cut(s)	201, 627, 749, 1544, 1641, 2505, 2574, 2606, 2657
HapII	CCGG	4 cut(s)	336, 408, 1289, 2358
HhaI	GCGC	3 cut(s)	842, 2622, 2842
Hin1I	GRCGYC	1 cut(s)	840
Hin6I	GCGC	3 cut(s)	840, 2620, 2840
HinP1I	GCGC	3 cut(s)	840, 2620, 2840
HincII	GTYRAC	5 cut(s)	1371, 1978, 2280, 2313, 2667
HindII	GTYRAC	5 cut(s)	1371, 1978, 2280, 2313, 2667
HindIII	AAGCTT	5 cut(s)	689, 1384, 1510, 2111, 2564
HpaI	GTTAAC	4 cut(s)	1371, 1978, 2313, 2667
HpaII	CCGG	4 cut(s)	336, 408, 1289, 2358
HphI	GGTGA	6 cut(s)	325, 422, 1835, 2372, 2701, 2825
Hpy166II	GTNNAC	5 cut(s)	1371, 1978, 2280, 2313, 2667
Hpy8I	GTNNAC	5 cut(s)	1371, 1978, 2280, 2313, 2667
HpyAV	CCTTC	8 cut(s)	689, 858, 1541, 1800, 1872, 2523, 2605, 2859
HpyCH4III	ACNGT	5 cut(s)	1415, 2074, 2096, 2132, 2653
HpyCH4IV	ACGT	1 cut(s)	2629
HpyF10VI	GCNNNNNNNGC	4 cut(s)	361, 1105, 1312, 2119
HpySE526I	ACGT	1 cut(s)	2629
Hsp92I	GRCGYC	1 cut(s)	840
HspAI	GCGC	3 cut(s)	840, 2620, 2840
KasI	GGCGCC	1 cut(s)	839
Ksp22I	TGATCA	5 cut(s)	217, 927, 1272, 1963, 2557
KspAI	GTTAAC	4 cut(s)	1371, 1978, 2313, 2667
LguI	GCTCTTC	1 cut(s)	651
LmnI	GCTCC	8 cut(s)	360, 798, 853, 1104, 1430, 1473, 1997, 2430
Lsp1109I	GCAGC	7 cut(s)	638, 686, 924, 965, 1293, 2307, 2648
LweI	GCATC	7 cut(s)	213, 595, 686, 870, 2594, 2743, 2894
MaeI	CTAG	4 cut(s)	1109, 2033, 2042, 2378
MaeII	ACGT	1 cut(s)	2629
MfeI	CAATTG	1 cut(s)	1395
MflI	RGATCY	5 cut(s)	142, 1111, 1177, 2335, 2383
MhlI	GDGCHC	4 cut(s)	181, 357, 1188, 2543
MlsI	TGGCCA	2 cut(s)	749, 2657
MluNI	TGGCCA	2 cut(s)	749, 2657
Mly113I	GGCGCC	1 cut(s)	840
MlyI	GAGTC	1 cut(s)	98
MmeI	TCCRAC	3 cut(s)	173, 1019, 1126
Mox20I	TGGCCA	2 cut(s)	749, 2657
Mph1103I	ATGCAT	3 cut(s)	6, 228, 2887
MroXI	GAANNNNTTC	2 cut(s)	642, 2095
MscI	TGGCCA	2 cut(s)	749, 2657
MslI	CAYNNNNRTG	1 cut(s)	26
Msp20I	TGGCCA	2 cut(s)	749, 2657
MspA1I	CMGCKG	2 cut(s)	1474, 2153
MspI	CCGG	4 cut(s)	336, 408, 1289, 2358
MspR9I	CCNGG	3 cut(s)	746, 1154, 2333
MunI	CAATTG	1 cut(s)	1395
Mva1269I	GAATGC	2 cut(s)	558, 990
MvaI	CCWGG	3 cut(s)	746, 1154, 2333
MwoI	GCNNNNNNNGC	4 cut(s)	361, 1105, 1312, 2119
NarI	GGCGCC	1 cut(s)	840
NcoI	CCATGG	1 cut(s)	2009
NdeI	CATATG	1 cut(s)	2296
NlaIV	GGNNCC	9 cut(s)	268, 290, 841, 1426, 1570, 1714, 1783, 1855, 2847
NsiI	ATGCAT	3 cut(s)	6, 228, 2887
NspI	RCATGY	1 cut(s)	2476
PaqCI	CACCTGC	1 cut(s)	2833
PciI	ACATGT	1 cut(s)	2472
PciSI	GCTCTTC	1 cut(s)	651
PctI	GAATGC	2 cut(s)	558, 990
PdmI	GAANNNNTTC	2 cut(s)	642, 2095
PflMI	CCANNNNNTGG	2 cut(s)	500, 2087
PfoI	TCCNGGA	1 cut(s)	2331
PkrI	GCNGC	8 cut(s)	653, 676, 914, 955, 1308, 2322, 2573, 2638
PleI	GAGTC	1 cut(s)	98
PluTI	GGCGCC	1 cut(s)	843
PpsI	GAGTC	1 cut(s)	98
Ppu21I	YACGTR	1 cut(s)	2630
PscI	ACATGT	1 cut(s)	2472
PshAI	GACNNNNGTC	1 cut(s)	2130
Psp124BI	GAGCTC	3 cut(s)	181, 357, 2543
Psp6I	CCWGG	3 cut(s)	744, 1152, 2331
PspFI	CCCAGC	1 cut(s)	2149
PspGI	CCWGG	3 cut(s)	744, 1152, 2331
PspN4I	GGNNCC	9 cut(s)	268, 290, 841, 1426, 1570, 1714, 1783, 1855, 2847
PspPI	GGNCC	6 cut(s)	1352, 1496, 1640, 2503, 2573, 2605
PstI	CTGCAG	4 cut(s)	1311, 1526, 2638, 2863
PstNI	CAGNNNCTG	2 cut(s)	1315, 2858
PsuI	RGATCY	5 cut(s)	142, 1111, 1177, 2335, 2383
PvuII	CAGCTG	1 cut(s)	1474
RsaI	GTAC	5 cut(s)	60, 809, 2076, 2632, 2819
RsaNI	GTAC	5 cut(s)	59, 808, 2075, 2631, 2818
RseI	CAYNNNNRTG	1 cut(s)	26
SacI	GAGCTC	3 cut(s)	181, 357, 2543
SapI	GCTCTTC	1 cut(s)	651
SatI	GCNGC	8 cut(s)	652, 675, 913, 954, 1307, 2321, 2572, 2637
Sau96I	GGNCC	6 cut(s)	1352, 1496, 1640, 2503, 2573, 2605
ScaI	AGTACT	3 cut(s)	60, 809, 2819
SchI	GAGTC	1 cut(s)	98
ScrFI	CCNGG	3 cut(s)	746, 1154, 2333
SduI	GDGCHC	4 cut(s)	181, 357, 1188, 2543
SfaNI	GCATC	7 cut(s)	213, 595, 686, 870, 2594, 2743, 2894
SfcI	CTRYAG	4 cut(s)	1307, 1522, 2634, 2859
SfoI	GGCGCC	1 cut(s)	841
SinI	GGWCC	2 cut(s)	1352, 1496
SmiMI	CAYNNNNRTG	1 cut(s)	26
SmlI	CTYRAG	9 cut(s)	517, 662, 875, 1234, 1381, 1451, 1676, 2108, 2498
SmoI	CTYRAG	9 cut(s)	517, 662, 875, 1234, 1381, 1451, 1676, 2108, 2498
SsiI	CCGC	7 cut(s)	358, 780, 1434, 1828, 1934, 2153, 2571
SspDI	GGCGCC	1 cut(s)	839
SspMI	CTAG	4 cut(s)	1109, 2033, 2042, 2378
SstI	GAGCTC	3 cut(s)	181, 357, 2543
StyD4I	CCNGG	3 cut(s)	744, 1152, 2331
StyI	CCWWGG	3 cut(s)	1242, 2009, 2428
TaaI	ACNGT	5 cut(s)	1415, 2074, 2096, 2132, 2653
TaiI	ACGT	1 cut(s)	2632
TaqI	TCGA	4 cut(s)	98, 1030, 1048, 2225
TaqII	GACCGA	1 cut(s)	1369
TatI	WGTACW	3 cut(s)	58, 807, 2817
TauI	GCSGC	1 cut(s)	2574
TscAI	CASTG	7 cut(s)	28, 628, 735, 1086, 1855, 2541, 2658
TseI	GCWGC	7 cut(s)	651, 674, 912, 953, 1306, 2320, 2636
TspDTI	ATGAA	9 cut(s)	28, 53, 635, 1582, 1941, 2054, 2268, 2405, 2882
TspRI	CASTG	7 cut(s)	28, 628, 735, 1086, 1855, 2541, 2658
Van91I	CCANNNNNTGG	2 cut(s)	500, 2087
VpaK11BI	GGWCC	2 cut(s)	1352, 1496
XapI	RAATTY	7 cut(s)	325, 735, 1284, 1687, 1813, 1868, 2830
XceI	RCATGY	1 cut(s)	2476
XcmI	CCANNNNNNNNNTGG	1 cut(s)	282
XmnI	GAANNNNTTC	2 cut(s)	642, 2095
XspI	CTAG	4 cut(s)	1109, 2033, 2042, 2378
ZrmI	AGTACT	3 cut(s)	60, 809, 2819
Zsp2I	ATGCAT	3 cut(s)	6, 228, 2887

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.