Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0017551

Physical Location & Seq

Genomic Coordinates Forward (+)

61426322 .. 61428100

Gene Structure 1779 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004682

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGATACATAGCGGGGTACATGGGGCGAAGAAGCTTCTGAACCGCTCCGCCGACTCACGCGCCGTCATCAATTCGACGACGCCGCAGCTGAAGAAGCTACCCTTTACCACCTCCAACGGCAGCCCAGCAGCCACAGATAGAGAACATCAAACACTCCACCATGTTCTTAAATCCTGCAAACTCGCTTTGGATTCCGCAACTGCAATTCAAACCCACGCTAGAATCATTACACGTGGATATGGCACATACCCTTCTCTCCTTGCTTCCCTTCTAGCTGTTTATAAGCGCTGTGGTTGTGTCACTCTTACTACTCAACTTGTCGATCACATTTTCAATTGTGCTAATGGTATCAACTTTTTGAATCTCGTTATCGAAAGCCTAATGAGGAATGGGGAATGTGACATTGCCAAGAGGGTGTTCCGAAAAGTCCCTTGCCCGGATTTAGTAACTTGGAACACTGTCATTGGAGGTTGTGTTCGAAATGAGCGTTTTCAGGAGGCATTGGGATTGTTCCGAAAGCTGTTGAGCTCGGATTTGGAGCCGGATGGGTTCACGTTTTCGTCTGTGATTACTGCATGTTCCCGGCTTGGAGCGCTGCATAATGCGCAGAGGGTGCATTGTCTGATGATGAAGAAGAGAATTGAGCTGAATTTTATTCTGAGTGCAGCTCTTATAGACATGTACTCAAAGTGTGGTAGGGTGCGGACTGCTAGAGAGATATTTGGTACTGTCCAGCATAATGATGTCTCGGTTTGGAATGCGATGATTAATGGATTGGCAATTCACGGGCTTGCTTTGGATGCAATCGAGATATTCTCAGAGATGGAGATGGATAATGTGTTACCTGATTCAATAACTTTTGTTGCCCTTCTGAAAGCTTGTGGTCATTGTAACTTGGTGGAAGAGGGTCGCAAGTACTTTGATTTGATGACACGTCGGTACTCAATTCAGCCAGAAATTGAGCATTACGGAGCCATGGTTGATCTCTTGGGTAGAGCAGGGCTTCTAGAAGAGGCTTACGCTACTATAAAGGCCATGGAAGTGGAGCCGGATGTTGTTATATGGAGGGCACTTCTCAGTGCCTGTAGGACTCATAAAAATTTAGAACTTGGAGAAATTGCCATTGCCAATATATCCCGTCCCAAGAGTGGAGATTATGTGTTGCTTTCAAATACTTATTGCTCTATAAAGAGGTGGGATGGTGCAGAGACAGTGCGCGAAATGATGAAGAAACAGAGAGTTCGTAAAAATCAAGGGAAGAGTTGGCTTGAGTTGGAAGGTATGATCCACCAATTCAGGGCTGCTGATCAGACACACCCCGAAATCAAATCAATATACAGAGTGTTGGAAGCATTGATCCAGCGGACCAAGTTGGAGGGCTTTATGCCTGTGACAGAGTTGGTTTTGATGGATGTATCCGAAGAGGAAAAAGAGGGAAATTTGAATTGTCACAGTGAAAAGCTGGCGTTGGCCTATGGAATCCTGAAAACAAGTCCTGGAACAGAAATCAGGATCTCGAAAAACCTTCGGATCTGTCATGATTGTCATTGCTGGATAAAAATGGTTTCAAGACTACTCAATAGAGTGATAATTGTGAGGGATAGGATTCGTTTTCACCACTTTGAAGGTGGTATGTGTTCTTGTGGAGAGTATTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2 RNase_T

Protein Analysis

553

Amino Acids

62.21

Weight (kDa)

8.72

Isoelectric Point (pI)

40.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	146 - 194	3.5e-12	PPR repeat family
PPR	PF01535	149 - 177	2.1e-06	PPR repeat
PPR_2	PF13041	248 - 295	3.7e-10	PPR repeat family
PPR	PF01535	251 - 279	5.1e-06	PPR repeat
E_motif	PF20431	365 - 424	9.8e-11	E motif
DYW_deaminase	PF14432	460 - 552	3.6e-37	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0017551)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50990
fragaria_vesca	FvH4_5g09670
rosa_chinensis	RchiOBHm_Chr7g0188581
rosa_laevigata	RLG00000004682
rosa_roxburghii	Rroxscaffold_3G00266240
rosa_rugosa	Rorug06G0491400 Rorug06G0491500
rosa_samantha	Rh7AG096200 Rh7BG098100 Rh7CG099100 Rh7DG098200
rosa_wichuraiana	Rw7G008320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	282
Acc16I	TGCGCA	1 cut(s)	606
AccBSI	CCGCTC	1 cut(s)	45
AccII	CGCG	2 cut(s)	60, 1218
AciI	CCGC	7 cut(s)	12, 43, 48, 83, 195, 703, 1363
AclWI	GGATC	4 cut(s)	1279, 1351, 1520, 1538
AcsI	RAATTY	3 cut(s)	649, 1099, 1438
AcuI	CTGAAG	1 cut(s)	110
AcvI	CACGTG	1 cut(s)	233
AcyI	GRCGYC	1 cut(s)	80
AfaI	GTAC	5 cut(s)	18, 683, 727, 917, 941
AfeI	AGCGCT	2 cut(s)	287, 594
AfiI	CCNNNNNNNGG	3 cut(s)	436, 1148, 1297
AflIII	ACRYGT	3 cut(s)	230, 678, 932
AgsI	TTSAA	8 cut(s)	209, 334, 361, 852, 1170, 1444, 1569, 1625
AjiI	CACGTC	1 cut(s)	935
AjnI	CCWGG	1 cut(s)	1495
AjuI	GAANNNNNNNTTGG	2 cut(s)	401, 433
AloI	GAACNNNNNNTCC	2 cut(s)	459, 491
Alw21I	GWGCWC	1 cut(s)	530
Alw26I	GTCTC	2 cut(s)	751, 1202
AlwI	GGATC	4 cut(s)	1279, 1351, 1520, 1538
AlwNI	CAGNNNCTG	1 cut(s)	1083
Aor51HI	AGCGCT	2 cut(s)	287, 594
AoxI	GGCC	2 cut(s)	1032, 1470
ApeKI	GCWGC	6 cut(s)	85, 120, 128, 595, 665, 1301
ApoI	RAATTY	3 cut(s)	649, 1099, 1438
AseI	ATTAAT	1 cut(s)	768
AspLEI	GCGC	5 cut(s)	62, 288, 595, 607, 1218
AspS9I	GGNCC	1 cut(s)	1365
AsuC2I	CCSGG	2 cut(s)	437, 583
AsuHPI	GGTGA	1 cut(s)	1607
AsuII	TTCGAA	1 cut(s)	478
AvaII	GGWCC	1 cut(s)	1365
BaeGI	GKGCMC	1 cut(s)	1072
BanII	GRGCYC	1 cut(s)	530
BbrPI	CACGTG	1 cut(s)	233
Bbv12I	GWGCWC	1 cut(s)	530
BbvI	GCAGC	6 cut(s)	97, 132, 140, 582, 677, 1288
BccI	CCATC	5 cut(s)	539, 817, 823, 1193, 1402
BceAI	ACGGC	2 cut(s)	47, 133
BciT130I	CCWGG	1 cut(s)	1497
BciVI	GTATCC	1 cut(s)	1426
BclI	TGATCA	1 cut(s)	1306
BcnI	CCSGG	2 cut(s)	437, 583
BcoDI	GTCTC	2 cut(s)	751, 1202
BfaI	CTAG	4 cut(s)	219, 272, 711, 1007
BfmI	CTRYAG	1 cut(s)	1084
BfoI	RGCGCY	2 cut(s)	289, 596
BfuI	GTATCC	1 cut(s)	1426
BisI	GCNGC	7 cut(s)	83, 86, 121, 129, 596, 666, 1302
BlsI	GCNGC	7 cut(s)	84, 87, 122, 130, 597, 667, 1303
BmcAI	AGTACT	1 cut(s)	917
Bme1390I	CCNGG	3 cut(s)	437, 583, 1497
Bme18I	GGWCC	1 cut(s)	1365
BmgBI	CACGTC	1 cut(s)	935
BmgT120I	GGNCC	1 cut(s)	1365
BmiI	GGNNCC	3 cut(s)	540, 973, 1047
BmrFI	CCNGG	3 cut(s)	437, 583, 1497
BmsI	GCATC	1 cut(s)	790
BplI	GAGNNNNNCTC	4 cut(s)	652, 684, 800, 832
Bpu14I	TTCGAA	1 cut(s)	478
BpuEI	CTTGAG	1 cut(s)	1289
BpuMI	CCSGG	2 cut(s)	437, 583
BsaAI	YACGTR	1 cut(s)	233
BsaHI	GRCGYC	1 cut(s)	80
BsaJI	CCNNGG	2 cut(s)	975, 1035
BsaXI	ACNNNNNCTCC	6 cut(s)	459, 489, 963, 993, 1143, 1173
Bsc4I	CCNNNNNNNGG	3 cut(s)	436, 1148, 1297
Bse3DI	GCAATG	3 cut(s)	402, 1122, 1546
BseBI	CCWGG	1 cut(s)	1497
BseDI	CCNNGG	2 cut(s)	975, 1035
BseGI	GGATG	5 cut(s)	550, 805, 1057, 1204, 1417
BseLI	CCNNNNNNNGG	3 cut(s)	436, 1148, 1297
BseMI	GCAATG	3 cut(s)	402, 1122, 1546
BseMII	CTCAG	3 cut(s)	650, 831, 1090
BseSI	GKGCMC	1 cut(s)	1072
BseXI	GCAGC	6 cut(s)	97, 132, 140, 582, 677, 1288
BseYI	CCCAGC	1 cut(s)	124
BsgI	GTGCAG	2 cut(s)	684, 1224
Bsh1236I	CGCG	2 cut(s)	60, 1218
BshFI	GGCC	2 cut(s)	1034, 1472
BsiHKAI	GWGCWC	1 cut(s)	530
BsiSI	CCGG	4 cut(s)	437, 542, 583, 1049
BslFI	GGGAC	2 cut(s)	413, 1125
BslI	CCNNNNNNNGG	3 cut(s)	436, 1148, 1297
BsmAI	GTCTC	2 cut(s)	751, 1202
BsmFI	GGGAC	2 cut(s)	413, 1125
BsmI	GAATGC	1 cut(s)	763
BsnI	GGCC	2 cut(s)	1034, 1472
Bsp119I	TTCGAA	1 cut(s)	478
Bsp1286I	GDGCHC	2 cut(s)	530, 1072
Bsp143I	GATC	7 cut(s)	322, 982, 1284, 1306, 1356, 1512, 1530
Bsp19I	CCATGG	2 cut(s)	975, 1035
BspACI	CCGC	7 cut(s)	12, 43, 48, 83, 195, 703, 1363
BspANI	GGCC	2 cut(s)	1034, 1472
BspCNI	CTCAG	3 cut(s)	651, 830, 1089
BspFNI	CGCG	2 cut(s)	60, 1218
BspHI	TCATGA	1 cut(s)	1537
BspLI	GGNNCC	3 cut(s)	540, 973, 1047
BspPI	GGATC	4 cut(s)	1279, 1351, 1520, 1538
BspT104I	TTCGAA	1 cut(s)	478
BsrBI	CCGCTC	1 cut(s)	45
BsrDI	GCAATG	3 cut(s)	402, 1122, 1546
BssECI	CCNNGG	2 cut(s)	975, 1035
BssMI	GATC	7 cut(s)	322, 982, 1284, 1306, 1356, 1512, 1530
BssNI	GRCGYC	1 cut(s)	80
BssT1I	CCWWGG	2 cut(s)	975, 1035
Bst2UI	CCWGG	1 cut(s)	1497
Bst4CI	ACNGT	4 cut(s)	460, 730, 1213, 1454
Bst6I	CTCTTC	5 cut(s)	629, 897, 1005, 1253, 1416
BstACI	GRCGYC	1 cut(s)	80
BstAPI	GCANNNNNTGC	1 cut(s)	613
BstBAI	YACGTR	1 cut(s)	233
BstBI	TTCGAA	1 cut(s)	478
BstC8I	GCNNGC	2 cut(s)	792, 1464
BstDEI	CTNAG	3 cut(s)	659, 817, 1076
BstDSI	CCRYGG	2 cut(s)	975, 1035
BstF5I	GGATG	5 cut(s)	550, 805, 1057, 1204, 1417
BstFNI	CGCG	2 cut(s)	60, 1218
BstH2I	RGCGCY	2 cut(s)	289, 596
BstHHI	GCGC	5 cut(s)	62, 288, 595, 607, 1218
BstKTI	GATC	7 cut(s)	325, 985, 1287, 1309, 1359, 1515, 1533
BstMAI	GTCTC	2 cut(s)	751, 1202
BstMBI	GATC	7 cut(s)	322, 982, 1284, 1306, 1356, 1512, 1530
BstMWI	GCNNNNNNNGC	5 cut(s)	94, 592, 604, 613, 800
BstNI	CCWGG	1 cut(s)	1497
BstNSI	RCATGY	2 cut(s)	579, 682
BstSCI	CCNGG	3 cut(s)	435, 581, 1495
BstSFI	CTRYAG	1 cut(s)	1084
BstSLI	GKGCMC	1 cut(s)	1072
BstUI	CGCG	2 cut(s)	60, 1218
BstV1I	GCAGC	6 cut(s)	97, 132, 140, 582, 677, 1288
BstX2I	RGATCY	2 cut(s)	1512, 1530
BstXI	CCANNNNNNTGG	1 cut(s)	1042
BstYI	RGATCY	2 cut(s)	1512, 1530
BsuI	GTATCC	1 cut(s)	1426
BsuRI	GGCC	2 cut(s)	1034, 1472
BtgI	CCRYGG	2 cut(s)	975, 1035
BtgZI	GCGATG	1 cut(s)	776
BtrI	CACGTC	1 cut(s)	935
BtsCI	GGATG	5 cut(s)	550, 805, 1057, 1204, 1417
BtsIMutI	CAGTG	4 cut(s)	456, 1084, 1218, 1459
Cac8I	GCNNGC	2 cut(s)	792, 1464
CaiI	CAGNNNCTG	1 cut(s)	1083
CciI	TCATGA	1 cut(s)	1537
CfoI	GCGC	5 cut(s)	62, 288, 595, 607, 1218
Cfr13I	GGNCC	1 cut(s)	1365
CseI	GACGC	1 cut(s)	88
Csp6I	GTAC	5 cut(s)	17, 682, 726, 916, 940
CviAII	CATG	7 cut(s)	20, 161, 576, 679, 976, 1036, 1538
CviQI	GTAC	5 cut(s)	17, 682, 726, 916, 940
DdeI	CTNAG	3 cut(s)	659, 817, 1076
DpnI	GATC	7 cut(s)	324, 984, 1286, 1308, 1358, 1514, 1532
DpnII	GATC	7 cut(s)	322, 982, 1284, 1306, 1356, 1512, 1530
Eam1104I	CTCTTC	5 cut(s)	629, 897, 1005, 1253, 1416
EarI	CTCTTC	5 cut(s)	629, 897, 1005, 1253, 1416
EciI	GGCGGA	1 cut(s)	37
Ecl136II	GAGCTC	1 cut(s)	528
Eco130I	CCWWGG	2 cut(s)	975, 1035
Eco24I	GRGCYC	1 cut(s)	530
Eco47I	GGWCC	1 cut(s)	1365
Eco47III	AGCGCT	2 cut(s)	287, 594
Eco53kI	GAGCTC	1 cut(s)	528
Eco57I	CTGAAG	1 cut(s)	110
Eco72I	CACGTG	1 cut(s)	233
EcoICRI	GAGCTC	1 cut(s)	528
EcoRII	CCWGG	1 cut(s)	1495
EcoT14I	CCWWGG	2 cut(s)	975, 1035
EcoT38I	GRGCYC	1 cut(s)	530
ErhI	CCWWGG	2 cut(s)	975, 1035
FaeI	CATG	7 cut(s)	23, 164, 579, 682, 979, 1039, 1541
FalI	AAGNNNNNCTT	2 cut(s)	86, 118
FaqI	GGGAC	2 cut(s)	413, 1125
FatI	CATG	7 cut(s)	19, 160, 575, 678, 975, 1035, 1537
FauI	CCCGC	1 cut(s)	5
FbaI	TGATCA	1 cut(s)	1306
Fnu4HI	GCNGC	7 cut(s)	83, 86, 121, 129, 596, 666, 1302
FokI	GGATG	5 cut(s)	557, 812, 1064, 1211, 1424
FriOI	GRGCYC	1 cut(s)	530
Fsp4HI	GCNGC	7 cut(s)	83, 86, 121, 129, 596, 666, 1302
FspBI	CTAG	4 cut(s)	219, 272, 711, 1007
FspI	TGCGCA	1 cut(s)	606
GlaI	GCGC	5 cut(s)	61, 287, 594, 606, 1217
GluI	GCNGC	7 cut(s)	83, 86, 121, 129, 596, 666, 1302
GsaI	CCCAGC	1 cut(s)	128
HaeII	RGCGCY	2 cut(s)	289, 596
HaeIII	GGCC	2 cut(s)	1034, 1472
HapII	CCGG	4 cut(s)	437, 542, 583, 1049
HgaI	GACGC	1 cut(s)	88
HhaI	GCGC	5 cut(s)	62, 288, 595, 607, 1218
Hin1I	GRCGYC	1 cut(s)	80
Hin1II	CATG	7 cut(s)	23, 164, 579, 682, 979, 1039, 1541
Hin6I	GCGC	5 cut(s)	60, 286, 593, 605, 1216
HinP1I	GCGC	5 cut(s)	60, 286, 593, 605, 1216
HindIII	AAGCTT	2 cut(s)	32, 876
HinfI	GANTC	8 cut(s)	53, 191, 222, 361, 848, 1090, 1479, 1606
HpaII	CCGG	4 cut(s)	437, 542, 583, 1049
HphI	GGTGA	1 cut(s)	1607
Hpy166II	GTNNAC	1 cut(s)	552
Hpy188III	TCNNGA	8 cut(s)	494, 808, 1007, 1483, 1510, 1516, 1538, 1569
Hpy8I	GTNNAC	1 cut(s)	552
Hpy99I	CGWCG	3 cut(s)	79, 82, 939
HpyAV	CCTTC	6 cut(s)	261, 278, 878, 1271, 1535, 1619
HpyCH4III	ACNGT	4 cut(s)	460, 730, 1213, 1454
HpyCH4IV	ACGT	3 cut(s)	232, 554, 934
HpyCH4V	TGCA	8 cut(s)	177, 203, 575, 598, 616, 665, 803, 1205
HpyF10VI	GCNNNNNNNGC	5 cut(s)	94, 592, 604, 613, 800
HpyF3I	CTNAG	3 cut(s)	659, 817, 1076
HpySE526I	ACGT	3 cut(s)	232, 554, 934
Hsp92I	GRCGYC	1 cut(s)	80
Hsp92II	CATG	7 cut(s)	23, 164, 579, 682, 979, 1039, 1541
HspAI	GCGC	5 cut(s)	60, 286, 593, 605, 1216
Ksp22I	TGATCA	1 cut(s)	1306
Kzo9I	GATC	7 cut(s)	322, 982, 1284, 1306, 1356, 1512, 1530
LmnI	GCTCC	5 cut(s)	50, 538, 590, 971, 1045
Lsp1109I	GCAGC	6 cut(s)	97, 132, 140, 582, 677, 1288
LweI	GCATC	1 cut(s)	790
MaeI	CTAG	4 cut(s)	219, 272, 711, 1007
MaeII	ACGT	3 cut(s)	232, 554, 934
MaeIII	GTNAC	7 cut(s)	298, 398, 445, 840, 890, 1390, 1448
MalI	GATC	7 cut(s)	324, 984, 1286, 1308, 1358, 1514, 1532
MbiI	CCGCTC	1 cut(s)	45
MboI	GATC	7 cut(s)	322, 982, 1284, 1306, 1356, 1512, 1530
MboII	GAAGA	9 cut(s)	40, 103, 643, 646, 914, 1022, 1240, 1270, 1433
MfeI	CAATTG	1 cut(s)	334
MflI	RGATCY	2 cut(s)	1512, 1530
MhlI	GDGCHC	2 cut(s)	530, 1072
MlyI	GAGTC	2 cut(s)	47, 1084
MmeI	TCCRAC	4 cut(s)	138, 1254, 1326, 1353
MseI	TTAA	2 cut(s)	168, 768
MslI	CAYNNNNRTG	2 cut(s)	741, 1040
MspA1I	CMGCKG	2 cut(s)	88, 1363
MspI	CCGG	4 cut(s)	437, 542, 583, 1049
MspR9I	CCNGG	3 cut(s)	437, 583, 1497
MunI	CAATTG	1 cut(s)	334
Mva1269I	GAATGC	1 cut(s)	763
MvaI	CCWGG	1 cut(s)	1497
MvnI	CGCG	2 cut(s)	60, 1218
MwoI	GCNNNNNNNGC	5 cut(s)	94, 592, 604, 613, 800
NciI	CCSGG	2 cut(s)	437, 583
NcoI	CCATGG	2 cut(s)	975, 1035
NdeII	GATC	7 cut(s)	322, 982, 1284, 1306, 1356, 1512, 1530
NlaIII	CATG	7 cut(s)	23, 164, 579, 682, 979, 1039, 1541
NlaIV	GGNNCC	3 cut(s)	540, 973, 1047
NmuCI	GTSAC	4 cut(s)	298, 398, 1390, 1448
NsbI	TGCGCA	1 cut(s)	606
NspI	RCATGY	2 cut(s)	579, 682
NspV	TTCGAA	1 cut(s)	478
PagI	TCATGA	1 cut(s)	1537
PciI	ACATGT	1 cut(s)	678
PcsI	WCGNNNNNNNCGW	1 cut(s)	484
PctI	GAATGC	1 cut(s)	763
PfeI	GAWTC	6 cut(s)	191, 222, 361, 848, 1479, 1606
PfoI	TCCNGGA	1 cut(s)	1495
PkrI	GCNGC	7 cut(s)	84, 87, 122, 130, 597, 667, 1303
PleI	GAGTC	2 cut(s)	47, 1084
PmaCI	CACGTG	1 cut(s)	233
PmlI	CACGTG	1 cut(s)	233
PpsI	GAGTC	2 cut(s)	47, 1084
Ppu21I	YACGTR	1 cut(s)	233
PscI	ACATGT	1 cut(s)	678
PshBI	ATTAAT	1 cut(s)	768
PsiI	TTATAA	1 cut(s)	282
Psp124BI	GAGCTC	1 cut(s)	530
Psp6I	CCWGG	1 cut(s)	1495
PspCI	CACGTG	1 cut(s)	233
PspFI	CCCAGC	1 cut(s)	124
PspGI	CCWGG	1 cut(s)	1495
PspN4I	GGNNCC	3 cut(s)	540, 973, 1047
PspPI	GGNCC	1 cut(s)	1365
PstNI	CAGNNNCTG	1 cut(s)	1083
PsuI	RGATCY	2 cut(s)	1512, 1530
PvuII	CAGCTG	1 cut(s)	88
RsaI	GTAC	5 cut(s)	18, 683, 727, 917, 941
RsaNI	GTAC	5 cut(s)	17, 682, 726, 916, 940
RseI	CAYNNNNRTG	2 cut(s)	741, 1040
SacI	GAGCTC	1 cut(s)	530
SaqAI	TTAA	2 cut(s)	168, 768
SatI	GCNGC	7 cut(s)	83, 86, 121, 129, 596, 666, 1302
Sau3AI	GATC	7 cut(s)	322, 982, 1284, 1306, 1356, 1512, 1530
Sau96I	GGNCC	1 cut(s)	1365
ScaI	AGTACT	1 cut(s)	917
SchI	GAGTC	2 cut(s)	47, 1084
ScrFI	CCNGG	3 cut(s)	437, 583, 1497
SduI	GDGCHC	2 cut(s)	530, 1072
SfaNI	GCATC	1 cut(s)	790
SfcI	CTRYAG	1 cut(s)	1084
SfuI	TTCGAA	1 cut(s)	478
SinI	GGWCC	1 cut(s)	1365
SmiMI	CAYNNNNRTG	2 cut(s)	741, 1040
SmlI	CTYRAG	1 cut(s)	1268
SmoI	CTYRAG	1 cut(s)	1268
SsiI	CCGC	7 cut(s)	12, 43, 48, 83, 195, 703, 1363
SspMI	CTAG	4 cut(s)	219, 272, 711, 1007
SstI	GAGCTC	1 cut(s)	530
StyD4I	CCNGG	3 cut(s)	435, 581, 1495
StyI	CCWWGG	2 cut(s)	975, 1035
TaaI	ACNGT	4 cut(s)	460, 730, 1213, 1454
TaiI	ACGT	3 cut(s)	235, 557, 937
TaqI	TCGA	6 cut(s)	74, 321, 372, 478, 807, 1517
TatI	WGTACW	2 cut(s)	681, 915
TauI	GCSGC	1 cut(s)	85
TfiI	GAWTC	6 cut(s)	191, 222, 361, 848, 1479, 1606
Tru1I	TTAA	2 cut(s)	168, 768
Tru9I	TTAA	2 cut(s)	168, 768
TscAI	CASTG	4 cut(s)	463, 1084, 1218, 1459
TseFI	GTSAC	4 cut(s)	298, 398, 1390, 1448
TseI	GCWGC	6 cut(s)	85, 120, 128, 595, 665, 1301
Tsp45I	GTSAC	4 cut(s)	298, 398, 1390, 1448
TspDTI	ATGAA	2 cut(s)	644, 1241
TspGWI	ACGGA	1 cut(s)	984
TspRI	CASTG	4 cut(s)	463, 1084, 1218, 1459
VpaK11BI	GGWCC	1 cut(s)	1365
VspI	ATTAAT	1 cut(s)	768
XapI	RAATTY	3 cut(s)	649, 1099, 1438
XbaI	TCTAGA	1 cut(s)	1006
XceI	RCATGY	2 cut(s)	579, 682
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1625
XspI	CTAG	4 cut(s)	219, 272, 711, 1007
ZrmI	AGTACT	1 cut(s)	917

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.