Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0017551

Physical Location & Seq

Genomic Coordinates Reverse (-)

7592407 .. 7594192

Gene Structure 1786 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G008320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGGCGAGGATGATACATAGCGGAGTACATGGGGCGAAGAAGCTTCTGAACCGCCCCGCTGACTCACGCGCCGTCATCAATTCGACGACGCCGCAGCTGAAGAAGCTACCCTTTACCACCTCCAACGGCGGCCCAGCAGCCACAGATAGAGAACATCAAACACTCCACCATGTTCTTAAATCCTGCAAACTCTCTTTGGATTCCGCAACTGCAGTTCAAACCCACGCTAGAATCATTACACGTGGATATGGCACATACCCTTCTCTCCTTGCTTCCCTTCTAGCTGTTTATAAGCGTTGTGGTTGTGTCACTCTTGCTACTCAACTTGTCGATCACATTTTCAATTGTGCTAATGGTATCAACTTTTTGAATCTCGTTATCGAAAGCCTCATGAGGAATGGGGAATGTGACATTGCCAAGAGGGTGTTCCGAAAAGTCCCTTGCCCGGATTTAGTAACTTGGAACACTGTCATTGGAGGCATTGGGATTGTTCCGAAGCTGTTGAGCTCGGATTTGGAGCCGGATGGGTTCACGTTTTCGTCTGTGATTACTGCATGCGCCCGGCTTGGAGCGCTGCATAATGCGCAGAGGGTGCATTGTCTGATGATGAACAAGAGAATTGATCTGAATTTCATTCTGAGTGCAGCTCTTATAGACATGTACTCAAAGTGTGGTAGAGTGCAGACTGCTAGAGAGATTTTTGGTGCTGTCCAGCATAATGATGTCTCGGTTTGGAATGCGATGATTAATGGATTGGCAATTCACGGGCTTGCTTTGGATGCAATCGAGATATTCTCAGAGATGGAGATGGATAATGTGTTACCTGATTCAATAACTTTTGTTGCCCTTCTGAAAGCTTGTGGTCATTGTAACTTGGTGGAAGAGGGTCGCAAGTACTTTGATTTGATGACAAGTCGGTACTCAATTCAGCCAGAAATTGAGCATTACGGAGCCATGGTTGATCTCTTGGGTAGAGCTGGGCTTCTAGAAGAGGCTTATGCAACTATAAAGGCCATGGAAGTGGAGCCGGATGTTGTTATATGGAGGGCACTTCTCAGTGCCTGTAGGACTCATAAAAATCCAGAACTTGGAGAGGTTGCCATTGCCAATATATCCCATCCCAAGAGTGGAGATTATGTGTTGCTTTCAAATACTTATTGCTCTATAAAGAGGTGGGATAGTGCAGAGACAGTGCGAGAAATGATGAAGAAACAGAGAGTTCGTAAAAATCAAGGGAAGAGTTGGCTTGAGTTGGAAGGTATGATCCACCAATTCAGGGCTGCTGATCAGACACACCCGGAAATGAAATCAATATACAGAGTGTTGGAGGCATTGATCCAGCGGACCAAATCAGAGGGCTTTATGCCTGTGACAGAGTTGGTTTTGATGGATGTATCCGAAGAGGAAAAAGAGGGAAATTTGAATTGTCATAGTGAAAAGCTGGCATTGGCCTATGGAATCCTAAAAACAAGTCCCGGAACAGAAATCAGGATCTCAAAAAACCTTCGGATCTGTCATGATTGTCATTGCTGGATAAAAATGGTTTCAAGACTACTCAATAGAGTGATCATTGTGAGGGATAGGATTCGTTTTCACTACTTTGAAGGTGGTATGTGTTCTTGTGGAGAGTATTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2 RNase_T

Protein Analysis

545

Amino Acids

61.0

Weight (kDa)

8.42

Isoelectric Point (pI)

39.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	241 - 288	3.7e-10	PPR repeat family
PPR	PF01535	244 - 272	5e-06	PPR repeat
E_motif	PF20431	358 - 417	6.9e-10	E motif
DYW_deaminase	PF14432	453 - 545	4.3e-36	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017551)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50990
fragaria_vesca	FvH4_5g09670
rosa_chinensis	RchiOBHm_Chr7g0188581
rosa_laevigata	RLG00000004682
rosa_roxburghii	Rroxscaffold_3G00266240
rosa_rugosa	Rorug06G0491400 Rorug06G0491500
rosa_samantha	Rh7AG096200 Rh7BG098100 Rh7CG099100 Rh7DG098200
rosa_wichuraiana	Rw7G008320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	291
Acc16I	TGCGCA	1 cut(s)	585
AccB7I	CCANNNNNTGG	1 cut(s)	1088
AccII	CGCG	1 cut(s)	69
AciI	CCGC	7 cut(s)	21, 52, 57, 92, 129, 204, 1342
AclWI	GGATC	4 cut(s)	1258, 1330, 1499, 1517
AcsI	RAATTY	2 cut(s)	628, 1417
AcuI	CTGAAG	1 cut(s)	119
AcvI	CACGTG	1 cut(s)	242
AcyI	GRCGYC	1 cut(s)	89
AfaI	GTAC	4 cut(s)	27, 662, 896, 920
AfeI	AGCGCT	1 cut(s)	573
AfiI	CCNNNNNNNGG	4 cut(s)	445, 1088, 1127, 1276
AflIII	ACRYGT	2 cut(s)	239, 657
AgsI	TTSAA	8 cut(s)	218, 343, 370, 831, 1149, 1423, 1548, 1604
AjuI	GAANNNNNNNTTGG	2 cut(s)	410, 442
Alw21I	GWGCWC	1 cut(s)	509
Alw26I	GTCTC	2 cut(s)	730, 1181
AlwI	GGATC	4 cut(s)	1258, 1330, 1499, 1517
AlwNI	CAGNNNCTG	1 cut(s)	1062
Aor51HI	AGCGCT	1 cut(s)	573
AoxI	GGCC	3 cut(s)	130, 1011, 1449
ApeKI	GCWGC	5 cut(s)	94, 137, 574, 644, 1280
ApoI	RAATTY	2 cut(s)	628, 1417
AseI	ATTAAT	1 cut(s)	747
AspLEI	GCGC	4 cut(s)	71, 560, 574, 586
AspS9I	GGNCC	2 cut(s)	131, 1344
AsuC2I	CCSGG	4 cut(s)	446, 562, 1298, 1476
AvaII	GGWCC	1 cut(s)	1344
BaeGI	GKGCMC	1 cut(s)	1051
BanII	GRGCYC	1 cut(s)	509
BbrPI	CACGTG	1 cut(s)	242
Bbv12I	GWGCWC	1 cut(s)	509
BbvI	GCAGC	5 cut(s)	106, 149, 561, 656, 1267
BccI	CCATC	5 cut(s)	518, 796, 802, 1125, 1381
BceAI	ACGGC	2 cut(s)	56, 142
BciVI	GTATCC	1 cut(s)	1405
BclI	TGATCA	2 cut(s)	1285, 1566
BcnI	CCSGG	4 cut(s)	446, 562, 1298, 1476
BcoDI	GTCTC	2 cut(s)	730, 1181
BfaI	CTAG	4 cut(s)	228, 281, 690, 986
BfmI	CTRYAG	2 cut(s)	210, 1063
BfoI	RGCGCY	1 cut(s)	575
BfuI	GTATCC	1 cut(s)	1405
BisI	GCNGC	7 cut(s)	92, 95, 130, 138, 575, 645, 1281
BlsI	GCNGC	7 cut(s)	93, 96, 131, 139, 576, 646, 1282
BmcAI	AGTACT	1 cut(s)	896
Bme1390I	CCNGG	4 cut(s)	446, 562, 1298, 1476
Bme18I	GGWCC	1 cut(s)	1344
BmgT120I	GGNCC	2 cut(s)	131, 1344
BmiI	GGNNCC	3 cut(s)	519, 952, 1026
BmrFI	CCNGG	4 cut(s)	446, 562, 1298, 1476
BmsI	GCATC	1 cut(s)	769
BplI	GAGNNNNNCTC	4 cut(s)	631, 663, 779, 811
BpuEI	CTTGAG	1 cut(s)	1268
BpuMI	CCSGG	4 cut(s)	446, 562, 1298, 1476
BsaAI	YACGTR	1 cut(s)	242
BsaHI	GRCGYC	1 cut(s)	89
BsaJI	CCNNGG	2 cut(s)	954, 1014
BsaXI	ACNNNNNCTCC	4 cut(s)	942, 972, 1122, 1152
Bsc4I	CCNNNNNNNGG	4 cut(s)	445, 1088, 1127, 1276
Bse3DI	GCAATG	3 cut(s)	411, 1101, 1525
BseDI	CCNNGG	2 cut(s)	954, 1014
BseGI	GGATG	6 cut(s)	15, 529, 784, 1036, 1117, 1396
BseLI	CCNNNNNNNGG	4 cut(s)	445, 1088, 1127, 1276
BseMI	GCAATG	3 cut(s)	411, 1101, 1525
BseMII	CTCAG	3 cut(s)	629, 810, 1069
BseSI	GKGCMC	1 cut(s)	1051
BseXI	GCAGC	5 cut(s)	106, 149, 561, 656, 1267
BseYI	CCCAGC	2 cut(s)	133, 977
BsgI	GTGCAG	3 cut(s)	663, 701, 1203
Bsh1236I	CGCG	1 cut(s)	69
BshFI	GGCC	3 cut(s)	132, 1013, 1451
BsiHKAI	GWGCWC	1 cut(s)	509
BsiSI	CCGG	6 cut(s)	446, 521, 562, 1028, 1298, 1476
BslFI	GGGAC	2 cut(s)	422, 1458
BslI	CCNNNNNNNGG	4 cut(s)	445, 1088, 1127, 1276
BsmAI	GTCTC	2 cut(s)	730, 1181
BsmFI	GGGAC	2 cut(s)	422, 1458
BsmI	GAATGC	1 cut(s)	742
BsnI	GGCC	3 cut(s)	132, 1013, 1451
Bsp1286I	GDGCHC	2 cut(s)	509, 1051
Bsp143I	GATC	9 cut(s)	331, 622, 961, 1263, 1285, 1335, 1491, 1509, 1566
Bsp19I	CCATGG	2 cut(s)	954, 1014
BspACI	CCGC	7 cut(s)	21, 52, 57, 92, 129, 204, 1342
BspANI	GGCC	3 cut(s)	132, 1013, 1451
BspCNI	CTCAG	3 cut(s)	630, 809, 1068
BspFNI	CGCG	1 cut(s)	69
BspHI	TCATGA	2 cut(s)	390, 1516
BspLI	GGNNCC	3 cut(s)	519, 952, 1026
BspMAI	CTGCAG	1 cut(s)	214
BspPI	GGATC	4 cut(s)	1258, 1330, 1499, 1517
BsrDI	GCAATG	3 cut(s)	411, 1101, 1525
BssECI	CCNNGG	2 cut(s)	954, 1014
BssMI	GATC	9 cut(s)	331, 622, 961, 1263, 1285, 1335, 1491, 1509, 1566
BssNI	GRCGYC	1 cut(s)	89
BssT1I	CCWWGG	2 cut(s)	954, 1014
Bst4CI	ACNGT	2 cut(s)	469, 1192
Bst6I	CTCTTC	4 cut(s)	876, 984, 1232, 1395
BstACI	GRCGYC	1 cut(s)	89
BstAPI	GCANNNNNTGC	1 cut(s)	592
BstBAI	YACGTR	1 cut(s)	242
BstC8I	GCNNGC	3 cut(s)	556, 771, 1443
BstDEI	CTNAG	3 cut(s)	638, 796, 1055
BstDSI	CCRYGG	2 cut(s)	954, 1014
BstF5I	GGATG	6 cut(s)	15, 529, 784, 1036, 1117, 1396
BstFNI	CGCG	1 cut(s)	69
BstH2I	RGCGCY	1 cut(s)	575
BstHHI	GCGC	4 cut(s)	71, 560, 574, 586
BstKTI	GATC	9 cut(s)	334, 625, 964, 1266, 1288, 1338, 1494, 1512, 1569
BstMAI	GTCTC	2 cut(s)	730, 1181
BstMBI	GATC	9 cut(s)	331, 622, 961, 1263, 1285, 1335, 1491, 1509, 1566
BstMWI	GCNNNNNNNGC	5 cut(s)	103, 571, 583, 592, 779
BstNSI	RCATGY	2 cut(s)	558, 661
BstSCI	CCNGG	4 cut(s)	444, 560, 1296, 1474
BstSFI	CTRYAG	2 cut(s)	210, 1063
BstSLI	GKGCMC	1 cut(s)	1051
BstUI	CGCG	1 cut(s)	69
BstV1I	GCAGC	5 cut(s)	106, 149, 561, 656, 1267
BstX2I	RGATCY	2 cut(s)	1491, 1509
BstXI	CCANNNNNNTGG	1 cut(s)	1021
BstYI	RGATCY	2 cut(s)	1491, 1509
BsuI	GTATCC	1 cut(s)	1405
BsuRI	GGCC	3 cut(s)	132, 1013, 1451
BtgI	CCRYGG	2 cut(s)	954, 1014
BtgZI	GCGATG	1 cut(s)	755
BtsCI	GGATG	6 cut(s)	15, 529, 784, 1036, 1117, 1396
BtsIMutI	CAGTG	3 cut(s)	465, 1063, 1197
Cac8I	GCNNGC	3 cut(s)	556, 771, 1443
CaiI	CAGNNNCTG	1 cut(s)	1062
CciI	TCATGA	2 cut(s)	390, 1516
CfoI	GCGC	4 cut(s)	71, 560, 574, 586
Cfr13I	GGNCC	2 cut(s)	131, 1344
CseI	GACGC	1 cut(s)	97
Csp6I	GTAC	4 cut(s)	26, 661, 895, 919
CviAII	CATG	8 cut(s)	29, 170, 391, 555, 658, 955, 1015, 1517
CviQI	GTAC	4 cut(s)	26, 661, 895, 919
DdeI	CTNAG	3 cut(s)	638, 796, 1055
DpnI	GATC	9 cut(s)	333, 624, 963, 1265, 1287, 1337, 1493, 1511, 1568
DpnII	GATC	9 cut(s)	331, 622, 961, 1263, 1285, 1335, 1491, 1509, 1566
Eam1104I	CTCTTC	4 cut(s)	876, 984, 1232, 1395
EarI	CTCTTC	4 cut(s)	876, 984, 1232, 1395
Ecl136II	GAGCTC	1 cut(s)	507
Eco130I	CCWWGG	2 cut(s)	954, 1014
Eco24I	GRGCYC	1 cut(s)	509
Eco47I	GGWCC	1 cut(s)	1344
Eco47III	AGCGCT	1 cut(s)	573
Eco53kI	GAGCTC	1 cut(s)	507
Eco57I	CTGAAG	1 cut(s)	119
Eco72I	CACGTG	1 cut(s)	242
EcoICRI	GAGCTC	1 cut(s)	507
EcoT14I	CCWWGG	2 cut(s)	954, 1014
EcoT38I	GRGCYC	1 cut(s)	509
ErhI	CCWWGG	2 cut(s)	954, 1014
FaeI	CATG	8 cut(s)	32, 173, 394, 558, 661, 958, 1018, 1520
FalI	AAGNNNNNCTT	2 cut(s)	95, 127
FaqI	GGGAC	2 cut(s)	422, 1458
FatI	CATG	8 cut(s)	28, 169, 390, 554, 657, 954, 1014, 1516
FauI	CCCGC	1 cut(s)	64
FbaI	TGATCA	2 cut(s)	1285, 1566
Fnu4HI	GCNGC	7 cut(s)	92, 95, 130, 138, 575, 645, 1281
FokI	GGATG	6 cut(s)	22, 536, 791, 1043, 1104, 1403
FriOI	GRGCYC	1 cut(s)	509
Fsp4HI	GCNGC	7 cut(s)	92, 95, 130, 138, 575, 645, 1281
FspBI	CTAG	4 cut(s)	228, 281, 690, 986
FspI	TGCGCA	1 cut(s)	585
GlaI	GCGC	4 cut(s)	70, 559, 573, 585
GluI	GCNGC	7 cut(s)	92, 95, 130, 138, 575, 645, 1281
GsaI	CCCAGC	2 cut(s)	137, 981
HaeII	RGCGCY	1 cut(s)	575
HaeIII	GGCC	3 cut(s)	132, 1013, 1451
HapII	CCGG	6 cut(s)	446, 521, 562, 1028, 1298, 1476
HgaI	GACGC	1 cut(s)	97
HhaI	GCGC	4 cut(s)	71, 560, 574, 586
Hin1I	GRCGYC	1 cut(s)	89
Hin1II	CATG	8 cut(s)	32, 173, 394, 558, 661, 958, 1018, 1520
Hin6I	GCGC	4 cut(s)	69, 558, 572, 584
HinP1I	GCGC	4 cut(s)	69, 558, 572, 584
HindIII	AAGCTT	2 cut(s)	41, 855
HinfI	GANTC	8 cut(s)	62, 200, 231, 370, 827, 1069, 1458, 1585
HpaII	CCGG	6 cut(s)	446, 521, 562, 1028, 1298, 1476
Hpy166II	GTNNAC	1 cut(s)	531
Hpy188III	TCNNGA	7 cut(s)	391, 787, 986, 1082, 1489, 1517, 1548
Hpy8I	GTNNAC	1 cut(s)	531
Hpy99I	CGWCG	2 cut(s)	88, 91
HpyAV	CCTTC	6 cut(s)	270, 287, 857, 1250, 1514, 1598
HpyCH4III	ACNGT	2 cut(s)	469, 1192
HpyCH4IV	ACGT	2 cut(s)	241, 533
HpyF10VI	GCNNNNNNNGC	5 cut(s)	103, 571, 583, 592, 779
HpyF3I	CTNAG	3 cut(s)	638, 796, 1055
HpySE526I	ACGT	2 cut(s)	241, 533
Hsp92I	GRCGYC	1 cut(s)	89
Hsp92II	CATG	8 cut(s)	32, 173, 394, 558, 661, 958, 1018, 1520
HspAI	GCGC	4 cut(s)	69, 558, 572, 584
Ksp22I	TGATCA	2 cut(s)	1285, 1566
Kzo9I	GATC	9 cut(s)	331, 622, 961, 1263, 1285, 1335, 1491, 1509, 1566
LmnI	GCTCC	4 cut(s)	517, 569, 950, 1024
Lsp1109I	GCAGC	5 cut(s)	106, 149, 561, 656, 1267
LweI	GCATC	1 cut(s)	769
MaeI	CTAG	4 cut(s)	228, 281, 690, 986
MaeII	ACGT	2 cut(s)	241, 533
MaeIII	GTNAC	6 cut(s)	307, 407, 454, 819, 869, 1369
MalI	GATC	9 cut(s)	333, 624, 963, 1265, 1287, 1337, 1493, 1511, 1568
MboI	GATC	9 cut(s)	331, 622, 961, 1263, 1285, 1335, 1491, 1509, 1566
MboII	GAAGA	7 cut(s)	49, 112, 893, 1001, 1219, 1249, 1412
MfeI	CAATTG	1 cut(s)	343
MflI	RGATCY	2 cut(s)	1491, 1509
MhlI	GDGCHC	2 cut(s)	509, 1051
MlyI	GAGTC	2 cut(s)	56, 1063
MmeI	TCCRAC	3 cut(s)	147, 1233, 1305
MseI	TTAA	2 cut(s)	177, 747
MslI	CAYNNNNRTG	2 cut(s)	720, 1019
MspA1I	CMGCKG	3 cut(s)	59, 97, 1342
MspI	CCGG	6 cut(s)	446, 521, 562, 1028, 1298, 1476
MspR9I	CCNGG	4 cut(s)	446, 562, 1298, 1476
MunI	CAATTG	1 cut(s)	343
Mva1269I	GAATGC	1 cut(s)	742
MvnI	CGCG	1 cut(s)	69
MwoI	GCNNNNNNNGC	5 cut(s)	103, 571, 583, 592, 779
NciI	CCSGG	4 cut(s)	446, 562, 1298, 1476
NcoI	CCATGG	2 cut(s)	954, 1014
NdeII	GATC	9 cut(s)	331, 622, 961, 1263, 1285, 1335, 1491, 1509, 1566
NlaIII	CATG	8 cut(s)	32, 173, 394, 558, 661, 958, 1018, 1520
NlaIV	GGNNCC	3 cut(s)	519, 952, 1026
NmuCI	GTSAC	3 cut(s)	307, 407, 1369
NsbI	TGCGCA	1 cut(s)	585
NspI	RCATGY	2 cut(s)	558, 661
PaeI	GCATGC	1 cut(s)	558
PagI	TCATGA	2 cut(s)	390, 1516
PciI	ACATGT	1 cut(s)	657
PctI	GAATGC	1 cut(s)	742
PfeI	GAWTC	6 cut(s)	200, 231, 370, 827, 1458, 1585
PflMI	CCANNNNNTGG	1 cut(s)	1088
PfoI	TCCNGGA	1 cut(s)	1474
PkrI	GCNGC	7 cut(s)	93, 96, 131, 139, 576, 646, 1282
PleI	GAGTC	2 cut(s)	56, 1063
PmaCI	CACGTG	1 cut(s)	242
PmlI	CACGTG	1 cut(s)	242
PpsI	GAGTC	2 cut(s)	56, 1063
Ppu21I	YACGTR	1 cut(s)	242
PscI	ACATGT	1 cut(s)	657
PshBI	ATTAAT	1 cut(s)	747
PsiI	TTATAA	1 cut(s)	291
Psp124BI	GAGCTC	1 cut(s)	509
PspCI	CACGTG	1 cut(s)	242
PspFI	CCCAGC	2 cut(s)	133, 977
PspN4I	GGNNCC	3 cut(s)	519, 952, 1026
PspPI	GGNCC	2 cut(s)	131, 1344
PstI	CTGCAG	1 cut(s)	214
PstNI	CAGNNNCTG	1 cut(s)	1062
PsuI	RGATCY	2 cut(s)	1491, 1509
PvuII	CAGCTG	1 cut(s)	97
RsaI	GTAC	4 cut(s)	27, 662, 896, 920
RsaNI	GTAC	4 cut(s)	26, 661, 895, 919
RseI	CAYNNNNRTG	2 cut(s)	720, 1019
SacI	GAGCTC	1 cut(s)	509
SaqAI	TTAA	2 cut(s)	177, 747
SatI	GCNGC	7 cut(s)	92, 95, 130, 138, 575, 645, 1281
Sau3AI	GATC	9 cut(s)	331, 622, 961, 1263, 1285, 1335, 1491, 1509, 1566
Sau96I	GGNCC	2 cut(s)	131, 1344
ScaI	AGTACT	1 cut(s)	896
SchI	GAGTC	2 cut(s)	56, 1063
ScrFI	CCNGG	4 cut(s)	446, 562, 1298, 1476
SduI	GDGCHC	2 cut(s)	509, 1051
SfaNI	GCATC	1 cut(s)	769
SfcI	CTRYAG	2 cut(s)	210, 1063
SinI	GGWCC	1 cut(s)	1344
SmiMI	CAYNNNNRTG	2 cut(s)	720, 1019
SmlI	CTYRAG	1 cut(s)	1247
SmoI	CTYRAG	1 cut(s)	1247
SphI	GCATGC	1 cut(s)	558
SsiI	CCGC	7 cut(s)	21, 52, 57, 92, 129, 204, 1342
SspMI	CTAG	4 cut(s)	228, 281, 690, 986
SstI	GAGCTC	1 cut(s)	509
StyD4I	CCNGG	4 cut(s)	444, 560, 1296, 1474
StyI	CCWWGG	2 cut(s)	954, 1014
TaaI	ACNGT	2 cut(s)	469, 1192
TaiI	ACGT	2 cut(s)	244, 536
TaqI	TCGA	4 cut(s)	83, 330, 381, 786
TatI	WGTACW	3 cut(s)	25, 660, 894
TauI	GCSGC	2 cut(s)	94, 132
TfiI	GAWTC	6 cut(s)	200, 231, 370, 827, 1458, 1585
Tru1I	TTAA	2 cut(s)	177, 747
Tru9I	TTAA	2 cut(s)	177, 747
TscAI	CASTG	3 cut(s)	472, 1063, 1197
TseFI	GTSAC	3 cut(s)	307, 407, 1369
TseI	GCWGC	5 cut(s)	94, 137, 574, 644, 1280
Tsp45I	GTSAC	3 cut(s)	307, 407, 1369
TspDTI	ATGAA	4 cut(s)	622, 623, 1220, 1319
TspGWI	ACGGA	1 cut(s)	963
TspRI	CASTG	3 cut(s)	472, 1063, 1197
Van91I	CCANNNNNTGG	1 cut(s)	1088
VpaK11BI	GGWCC	1 cut(s)	1344
VspI	ATTAAT	1 cut(s)	747
XapI	RAATTY	2 cut(s)	628, 1417
XbaI	TCTAGA	1 cut(s)	985
XceI	RCATGY	2 cut(s)	558, 661
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1124
XspI	CTAG	4 cut(s)	228, 281, 690, 986
ZrmI	AGTACT	1 cut(s)	896

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.