Rh7DG098200

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0017551
Physical Location & Seq
Reverse (-)
8195138 .. 8201246
6109 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG098200.1

Sequence Viewer

Length: 1791 bp
ATGGCGAGGATGATACATAGCGGAGTACATGGGGCGAAGAAGCTTCTGAACCGCTCCGCCGACTCACGCGCCGTCATCAATTCGGCGACGCCGCAGCTGAAGAAGCTACCCTTTTCCACCTCCAACGGCGGCCCAGCAGCCACAGATAGAGGTCAGCCAACCCATCAACCCCACTTTGCTCTTATTAGCTCATACACTCTTTTCATGAACTGGGCATCACTTTGTTTTACTTCTAGTTCTTTCCTGAATGTTTACAAATTCTCAGTTGTTTCAGAACATCAAACACTCCACCATGTTCTTAAATCCTGCAAACTCTCTTTGGATTCCGCAACTGCAGTTCAAACCCACGCTAGAATCATTACACGTGGATATGGCACATACCCTTCTCTCCTTGCTTCCCTTCTAGCTGTTTATAAGCGTTGTGGTTGTGTCACTCTTGCTACTCAACTTGTCGATCACATTTTCAATTGTGCTAATGGTATCAACTCTTTGAATCTCGTTATCGAAAGCCTCATGAGGAATGGGGAATGTGACATTGCCAAGAGGGTGTTCCGAAAAGTCCCTTGCCCGGATTTAGTAACTTGGAACACTGTCATTGCAGGTTGTGTTCGAAATGAGCGTTTTCAGGAGGCATTGGGATTGTTCCGGAAGCTGTTGAGCTCGGATTTGGAGCCGGATGGGTTCACGTTTTCGTCTGTGATTACTGCCTGCGCCCGGCTTGGAGCGCTGCATAATGCGCAGAGGGTGCATTGTCTGATGATGAACAAGAGAATTGATCTGAATTTCATTCTGAGTGCAGCTCTTATAGACATGTACTCAAAGTGTGGTAGAGTGCAGACTGCTAGAGAGATTTTTGGTGCTGTCCAGCATAATCATGTCTCGGTTTGGAATGCGATGATTAATGGATTGGCAATTCACGGGCTTGCTTTGGATGCAATCGAGATATTCTCAGAGATGGAGATGGATAATGTGTTACCTGATTCAATAACTTTTGTTGCCCTTCTGAAAGCTTGTGGTCATTGTAACTTGGTGGAAGAGGGTCGCAAGTACTTTGATTTGATGACAAGTCGGTACTCAATTCAGCCAGAAATTGAGCATTACGGAGCCATGGTTGATCTCTTGGGTAGGGCTGGGCTTCTAGAAGAGGCTTATGCAACTATAAAGGCCATGGAAGTGGAGCCGGATGTTGTTATATGGAGGGCACTTCTCAGTGCCTGTAGGACTCATAAAAATCCAGAACTTGGAGAGGTTGCCATTGCCAATATATCCCATCCCAAGAGTGGAGATTATGTGTTGCTTTCAAATACTTATTGCTCTATAAAGAGGTGGGATAGTGCAGAGACAGTGCGAGAAATGATGAAGAAACAGAGAGTTCATAAAAATCAAGGGAAGAGTTGGCTTGAGTTGGAAGGTATGATCCACCAATTCAGGGCTGCTGATCAGACACACCCCGAAATGAAATCAATATACAGAGTGTTGGAGGCATTGATCCAGCGGACCAAGTCAGAGGGCTTTATGCCTGTGACAGAGTTGGTTTTGATGGATGTATCCGAAGAGGAAAAAGAGGGAAATTTGAATTGTCACAGTGAAAAGCTGGCATTGGCCTATGGAATCCTAAAAACAAGTCCTGGAACAGAAATCAGGATCTCAAAAAACCTTCGGATCTGTCATGATTGTCATTGCTGGATAAAAATGGTTTCAAGACTACTCAATAGAGTGATCATTGTGAGGGATAGGATTCGTTTTCACTACTTTGAAGGTGGTATGTGTTCTTGTGGAGAGTATTGGTAG

Protein Analysis

596

Amino Acids

66.87

Weight (kDa)

8.55

Isoelectric Point (pI)

38.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 190 - 239 1.6e-12 PPR repeat family
PPR PF01535 193 - 221 2.7e-06 PPR repeat
PPR_2 PF13041 293 - 339 1.6e-09 PPR repeat family
PPR PF01535 295 - 323 5.6e-06 PPR repeat
E_motif PF20431 409 - 468 1.1e-09 E motif
DYW_deaminase PF14432 504 - 596 5e-36 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017551)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G50990
fragaria_vesca FvH4_5g09670
rosa_chinensis RchiOBHm_Chr7g0188581
rosa_laevigata RLG00000004682
rosa_roxburghii Rroxscaffold_3G00266240
rosa_rugosa Rorug06G0491400 Rorug06G0491500
rosa_samantha Rh7AG096200 Rh7BG098100 Rh7CG099100 Rh7DG098200
rosa_wichuraiana Rw7G008320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 414
Acc16I TGCGCA 1 cut(s) 738
Acc36I ACCTGC 1 cut(s) 590
AccB7I CCANNNNNTGG 1 cut(s) 1241
AccBSI CCGCTC 1 cut(s) 54
AccII CGCG 1 cut(s) 69
AccIII TCCGGA 1 cut(s) 645
AciI CCGC 7 cut(s) 21, 52, 57, 92, 129, 327, 1495
AclWI GGATC 4 cut(s) 1411, 1483, 1652, 1670
AcsI RAATTY 3 cut(s) 257, 781, 1570
AcuI CTGAAG 1 cut(s) 119
AcvI CACGTG 1 cut(s) 365
AcyI GRCGYC 1 cut(s) 89
AfaI GTAC 4 cut(s) 27, 815, 1049, 1073
AfeI AGCGCT 1 cut(s) 726
AfiI CCNNNNNNNGG 5 cut(s) 568, 714, 1241, 1280, 1429
AflIII ACRYGT 2 cut(s) 362, 810
AgsI TTSAA 8 cut(s) 341, 466, 493, 984, 1302, 1576, 1701, 1757
AjnI CCWGG 1 cut(s) 1627
AjuI GAANNNNNNNTTGG 2 cut(s) 533, 565
Alw21I GWGCWC 1 cut(s) 662
Alw26I GTCTC 2 cut(s) 883, 1334
AlwI GGATC 4 cut(s) 1411, 1483, 1652, 1670
AlwNI CAGNNNCTG 1 cut(s) 1215
Aor13HI TCCGGA 1 cut(s) 645
Aor51HI AGCGCT 1 cut(s) 726
AoxI GGCC 3 cut(s) 130, 1164, 1602
ApeKI GCWGC 5 cut(s) 94, 137, 727, 797, 1433
ApoI RAATTY 3 cut(s) 257, 781, 1570
AseI ATTAAT 1 cut(s) 900
AspLEI GCGC 4 cut(s) 71, 713, 727, 739
AspS9I GGNCC 2 cut(s) 131, 1497
AsuC2I CCSGG 2 cut(s) 569, 715
AsuII TTCGAA 1 cut(s) 610
AvaII GGWCC 1 cut(s) 1497
BaeGI GKGCMC 1 cut(s) 1204
BanII GRGCYC 1 cut(s) 662
BbrPI CACGTG 1 cut(s) 365
Bbv12I GWGCWC 1 cut(s) 662
BbvI GCAGC 5 cut(s) 106, 149, 714, 809, 1420
BccI CCATC 6 cut(s) 171, 671, 949, 955, 1278, 1534
BceAI ACGGC 2 cut(s) 56, 142
BciT130I CCWGG 1 cut(s) 1629
BciVI GTATCC 1 cut(s) 1558
BclI TGATCA 2 cut(s) 1438, 1719
BcnI CCSGG 2 cut(s) 569, 715
BcoDI GTCTC 2 cut(s) 883, 1334
BfaI CTAG 5 cut(s) 234, 351, 404, 843, 1139
BfmI CTRYAG 2 cut(s) 333, 1216
BfoI RGCGCY 1 cut(s) 728
BfuAI ACCTGC 1 cut(s) 590
BfuI GTATCC 1 cut(s) 1558
BisI GCNGC 7 cut(s) 92, 95, 130, 138, 728, 798, 1434
BlsI GCNGC 7 cut(s) 93, 96, 131, 139, 729, 799, 1435
BmcAI AGTACT 1 cut(s) 1049
Bme1390I CCNGG 3 cut(s) 569, 715, 1629
Bme18I GGWCC 1 cut(s) 1497
BmgT120I GGNCC 2 cut(s) 131, 1497
BmiI GGNNCC 3 cut(s) 672, 1105, 1179
BmrFI CCNGG 3 cut(s) 569, 715, 1629
BmrI ACTGGG 1 cut(s) 220
BmsI GCATC 2 cut(s) 224, 922
BmuI ACTGGG 1 cut(s) 220
BplI GAGNNNNNCTC 4 cut(s) 784, 816, 932, 964
Bpu14I TTCGAA 1 cut(s) 610
BpuEI CTTGAG 1 cut(s) 1421
BpuMI CCSGG 2 cut(s) 569, 715
BsaAI YACGTR 1 cut(s) 365
BsaHI GRCGYC 1 cut(s) 89
BsaJI CCNNGG 2 cut(s) 1107, 1167
BsaWI WCCGGW 1 cut(s) 645
BsaXI ACNNNNNCTCC 4 cut(s) 1095, 1125, 1275, 1305
Bsc4I CCNNNNNNNGG 5 cut(s) 568, 714, 1241, 1280, 1429
Bse1I ACTGG 1 cut(s) 215
Bse3DI GCAATG 4 cut(s) 534, 594, 1254, 1678
BseAI TCCGGA 1 cut(s) 645
BseBI CCWGG 1 cut(s) 1629
BseDI CCNNGG 2 cut(s) 1107, 1167
BseGI GGATG 6 cut(s) 15, 682, 937, 1189, 1270, 1549
BseLI CCNNNNNNNGG 5 cut(s) 568, 714, 1241, 1280, 1429
BseMI GCAATG 4 cut(s) 534, 594, 1254, 1678
BseMII CTCAG 4 cut(s) 276, 782, 963, 1222
BseNI ACTGG 1 cut(s) 215
BseSI GKGCMC 1 cut(s) 1204
BseXI GCAGC 5 cut(s) 106, 149, 714, 809, 1420
BseYI CCCAGC 2 cut(s) 133, 1130
BsgI GTGCAG 3 cut(s) 816, 854, 1356
Bsh1236I CGCG 1 cut(s) 69
BshFI GGCC 3 cut(s) 132, 1166, 1604
BsiHKAI GWGCWC 1 cut(s) 662
BsiSI CCGG 5 cut(s) 569, 646, 674, 715, 1181
BslFI GGGAC 1 cut(s) 545
BslI CCNNNNNNNGG 5 cut(s) 568, 714, 1241, 1280, 1429
BsmAI GTCTC 2 cut(s) 883, 1334
BsmFI GGGAC 1 cut(s) 545
BsmI GAATGC 1 cut(s) 895
BsnI GGCC 3 cut(s) 132, 1166, 1604
Bsp119I TTCGAA 1 cut(s) 610
Bsp1286I GDGCHC 2 cut(s) 662, 1204
Bsp13I TCCGGA 1 cut(s) 645
Bsp143I GATC 9 cut(s) 454, 775, 1114, 1416, 1438, 1488, 1644, 1662, 1719
Bsp19I CCATGG 2 cut(s) 1107, 1167
BspACI CCGC 7 cut(s) 21, 52, 57, 92, 129, 327, 1495
BspANI GGCC 3 cut(s) 132, 1166, 1604
BspCNI CTCAG 4 cut(s) 275, 783, 962, 1221
BspEI TCCGGA 1 cut(s) 645
BspFNI CGCG 1 cut(s) 69
BspHI TCATGA 3 cut(s) 204, 513, 1669
BspLI GGNNCC 3 cut(s) 672, 1105, 1179
BspMAI CTGCAG 1 cut(s) 337
BspMI ACCTGC 1 cut(s) 590
BspPI GGATC 4 cut(s) 1411, 1483, 1652, 1670
BspT104I TTCGAA 1 cut(s) 610
BsrBI CCGCTC 1 cut(s) 54
BsrDI GCAATG 4 cut(s) 534, 594, 1254, 1678
BsrI ACTGG 1 cut(s) 215
BssECI CCNNGG 2 cut(s) 1107, 1167
BssMI GATC 9 cut(s) 454, 775, 1114, 1416, 1438, 1488, 1644, 1662, 1719
BssNI GRCGYC 1 cut(s) 89
BssT1I CCWWGG 2 cut(s) 1107, 1167
Bst2UI CCWGG 1 cut(s) 1629
Bst4CI ACNGT 3 cut(s) 592, 1345, 1586
Bst6I CTCTTC 4 cut(s) 1029, 1137, 1385, 1548
BstACI GRCGYC 1 cut(s) 89
BstAPI GCANNNNNTGC 1 cut(s) 745
BstBAI YACGTR 1 cut(s) 365
BstBI TTCGAA 1 cut(s) 610
BstC8I GCNNGC 3 cut(s) 709, 924, 1596
BstDEI CTNAG 4 cut(s) 262, 791, 949, 1208
BstDSI CCRYGG 2 cut(s) 1107, 1167
BstF5I GGATG 6 cut(s) 15, 682, 937, 1189, 1270, 1549
BstFNI CGCG 1 cut(s) 69
BstH2I RGCGCY 1 cut(s) 728
BstHHI GCGC 4 cut(s) 71, 713, 727, 739
BstKTI GATC 9 cut(s) 457, 778, 1117, 1419, 1441, 1491, 1647, 1665, 1722
BstMAI GTCTC 2 cut(s) 883, 1334
BstMBI GATC 9 cut(s) 454, 775, 1114, 1416, 1438, 1488, 1644, 1662, 1719
BstMWI GCNNNNNNNGC 5 cut(s) 103, 724, 736, 745, 932
BstNI CCWGG 1 cut(s) 1629
BstNSI RCATGY 1 cut(s) 814
BstSCI CCNGG 3 cut(s) 567, 713, 1627
BstSFI CTRYAG 2 cut(s) 333, 1216
BstSLI GKGCMC 1 cut(s) 1204
BstUI CGCG 1 cut(s) 69
BstV1I GCAGC 5 cut(s) 106, 149, 714, 809, 1420
BstX2I RGATCY 2 cut(s) 1644, 1662
BstXI CCANNNNNNTGG 1 cut(s) 1174
BstYI RGATCY 2 cut(s) 1644, 1662
BsuI GTATCC 1 cut(s) 1558
BsuRI GGCC 3 cut(s) 132, 1166, 1604
BtgI CCRYGG 2 cut(s) 1107, 1167
BtgZI GCGATG 1 cut(s) 908
BtsCI GGATG 6 cut(s) 15, 682, 937, 1189, 1270, 1549
BtsIMutI CAGTG 4 cut(s) 588, 1216, 1350, 1591
BveI ACCTGC 1 cut(s) 590
Cac8I GCNNGC 3 cut(s) 709, 924, 1596
CaiI CAGNNNCTG 1 cut(s) 1215
CciI TCATGA 3 cut(s) 204, 513, 1669
CfoI GCGC 4 cut(s) 71, 713, 727, 739
Cfr13I GGNCC 2 cut(s) 131, 1497
CseI GACGC 1 cut(s) 97
Csp6I GTAC 4 cut(s) 26, 814, 1048, 1072
CviAII CATG 9 cut(s) 29, 205, 293, 514, 811, 875, 1108, 1168, 1670
CviQI GTAC 4 cut(s) 26, 814, 1048, 1072
DdeI CTNAG 4 cut(s) 262, 791, 949, 1208
DpnI GATC 9 cut(s) 456, 777, 1116, 1418, 1440, 1490, 1646, 1664, 1721
DpnII GATC 9 cut(s) 454, 775, 1114, 1416, 1438, 1488, 1644, 1662, 1719
Eam1104I CTCTTC 4 cut(s) 1029, 1137, 1385, 1548
EarI CTCTTC 4 cut(s) 1029, 1137, 1385, 1548
EciI GGCGGA 1 cut(s) 46
Ecl136II GAGCTC 1 cut(s) 660
Eco130I CCWWGG 2 cut(s) 1107, 1167
Eco24I GRGCYC 1 cut(s) 662
Eco47I GGWCC 1 cut(s) 1497
Eco47III AGCGCT 1 cut(s) 726
Eco53kI GAGCTC 1 cut(s) 660
Eco57I CTGAAG 1 cut(s) 119
Eco72I CACGTG 1 cut(s) 365
EcoICRI GAGCTC 1 cut(s) 660
EcoRII CCWGG 1 cut(s) 1627
EcoT14I CCWWGG 2 cut(s) 1107, 1167
EcoT38I GRGCYC 1 cut(s) 662
ErhI CCWWGG 2 cut(s) 1107, 1167
FaeI CATG 9 cut(s) 32, 208, 296, 517, 814, 878, 1111, 1171, 1673
FalI AAGNNNNNCTT 2 cut(s) 95, 127
FaqI GGGAC 1 cut(s) 545
FatI CATG 9 cut(s) 28, 204, 292, 513, 810, 874, 1107, 1167, 1669
FbaI TGATCA 2 cut(s) 1438, 1719
Fnu4HI GCNGC 7 cut(s) 92, 95, 130, 138, 728, 798, 1434
FokI GGATG 6 cut(s) 22, 689, 944, 1196, 1257, 1556
FriOI GRGCYC 1 cut(s) 662
Fsp4HI GCNGC 7 cut(s) 92, 95, 130, 138, 728, 798, 1434
FspBI CTAG 5 cut(s) 234, 351, 404, 843, 1139
FspI TGCGCA 1 cut(s) 738
GlaI GCGC 4 cut(s) 70, 712, 726, 738
GluI GCNGC 7 cut(s) 92, 95, 130, 138, 728, 798, 1434
GsaI CCCAGC 2 cut(s) 137, 1134
HaeII RGCGCY 1 cut(s) 728
HaeIII GGCC 3 cut(s) 132, 1166, 1604
HapII CCGG 5 cut(s) 569, 646, 674, 715, 1181
HgaI GACGC 1 cut(s) 97
HhaI GCGC 4 cut(s) 71, 713, 727, 739
Hin1I GRCGYC 1 cut(s) 89
Hin1II CATG 9 cut(s) 32, 208, 296, 517, 814, 878, 1111, 1171, 1673
Hin6I GCGC 4 cut(s) 69, 711, 725, 737
HinP1I GCGC 4 cut(s) 69, 711, 725, 737
HindIII AAGCTT 2 cut(s) 41, 1008
HinfI GANTC 8 cut(s) 62, 323, 354, 493, 980, 1222, 1611, 1738
HpaII CCGG 5 cut(s) 569, 646, 674, 715, 1181
Hpy166II GTNNAC 2 cut(s) 253, 684
Hpy8I GTNNAC 2 cut(s) 253, 684
Hpy99I CGWCG 1 cut(s) 91
HpyAV CCTTC 6 cut(s) 393, 410, 1010, 1403, 1667, 1751
HpyCH4III ACNGT 3 cut(s) 592, 1345, 1586
HpyCH4IV ACGT 2 cut(s) 364, 686
HpyF10VI GCNNNNNNNGC 5 cut(s) 103, 724, 736, 745, 932
HpyF3I CTNAG 4 cut(s) 262, 791, 949, 1208
HpySE526I ACGT 2 cut(s) 364, 686
Hsp92I GRCGYC 1 cut(s) 89
Hsp92II CATG 9 cut(s) 32, 208, 296, 517, 814, 878, 1111, 1171, 1673
HspAI GCGC 4 cut(s) 69, 711, 725, 737
Kpn2I TCCGGA 1 cut(s) 645
Ksp22I TGATCA 2 cut(s) 1438, 1719
Kzo9I GATC 9 cut(s) 454, 775, 1114, 1416, 1438, 1488, 1644, 1662, 1719
LmnI GCTCC 5 cut(s) 59, 670, 722, 1103, 1177
Lsp1109I GCAGC 5 cut(s) 106, 149, 714, 809, 1420
LweI GCATC 2 cut(s) 224, 922
MaeI CTAG 5 cut(s) 234, 351, 404, 843, 1139
MaeII ACGT 2 cut(s) 364, 686
MaeIII GTNAC 7 cut(s) 430, 530, 577, 972, 1022, 1522, 1580
MalI GATC 9 cut(s) 456, 777, 1116, 1418, 1440, 1490, 1646, 1664, 1721
MbiI CCGCTC 1 cut(s) 54
MboI GATC 9 cut(s) 454, 775, 1114, 1416, 1438, 1488, 1644, 1662, 1719
MboII GAAGA 7 cut(s) 49, 112, 1046, 1154, 1372, 1402, 1565
MfeI CAATTG 1 cut(s) 466
MflI RGATCY 2 cut(s) 1644, 1662
MhlI GDGCHC 2 cut(s) 662, 1204
MlyI GAGTC 2 cut(s) 56, 1216
MmeI TCCRAC 3 cut(s) 147, 1386, 1458
MroI TCCGGA 1 cut(s) 645
MseI TTAA 2 cut(s) 300, 900
MslI CAYNNNNRTG 2 cut(s) 873, 1172
MspA1I CMGCKG 2 cut(s) 97, 1495
MspI CCGG 5 cut(s) 569, 646, 674, 715, 1181
MspR9I CCNGG 3 cut(s) 569, 715, 1629
MunI CAATTG 1 cut(s) 466
Mva1269I GAATGC 1 cut(s) 895
MvaI CCWGG 1 cut(s) 1629
MvnI CGCG 1 cut(s) 69
MwoI GCNNNNNNNGC 5 cut(s) 103, 724, 736, 745, 932
NciI CCSGG 2 cut(s) 569, 715
NcoI CCATGG 2 cut(s) 1107, 1167
NdeII GATC 9 cut(s) 454, 775, 1114, 1416, 1438, 1488, 1644, 1662, 1719
NlaIII CATG 9 cut(s) 32, 208, 296, 517, 814, 878, 1111, 1171, 1673
NlaIV GGNNCC 3 cut(s) 672, 1105, 1179
NmuCI GTSAC 4 cut(s) 430, 530, 1522, 1580
NsbI TGCGCA 1 cut(s) 738
NspI RCATGY 1 cut(s) 814
NspV TTCGAA 1 cut(s) 610
PagI TCATGA 3 cut(s) 204, 513, 1669
PciI ACATGT 1 cut(s) 810
PcsI WCGNNNNNNNCGW 1 cut(s) 616
PctI GAATGC 1 cut(s) 895
PfeI GAWTC 6 cut(s) 323, 354, 493, 980, 1611, 1738
PflFI GACNNNGTC 1 cut(s) 1501
PflMI CCANNNNNTGG 1 cut(s) 1241
PfoI TCCNGGA 1 cut(s) 1627
PkrI GCNGC 7 cut(s) 93, 96, 131, 139, 729, 799, 1435
PleI GAGTC 2 cut(s) 56, 1216
PmaCI CACGTG 1 cut(s) 365
PmlI CACGTG 1 cut(s) 365
PpsI GAGTC 2 cut(s) 56, 1216
Ppu21I YACGTR 1 cut(s) 365
PscI ACATGT 1 cut(s) 810
PshBI ATTAAT 1 cut(s) 900
PsiI TTATAA 1 cut(s) 414
Psp124BI GAGCTC 1 cut(s) 662
Psp6I CCWGG 1 cut(s) 1627
PspCI CACGTG 1 cut(s) 365
PspFI CCCAGC 2 cut(s) 133, 1130
PspGI CCWGG 1 cut(s) 1627
PspN4I GGNNCC 3 cut(s) 672, 1105, 1179
PspPI GGNCC 2 cut(s) 131, 1497
PstI CTGCAG 1 cut(s) 337
PstNI CAGNNNCTG 1 cut(s) 1215
PsuI RGATCY 2 cut(s) 1644, 1662
PsyI GACNNNGTC 1 cut(s) 1501
PvuII CAGCTG 1 cut(s) 97
RsaI GTAC 4 cut(s) 27, 815, 1049, 1073
RsaNI GTAC 4 cut(s) 26, 814, 1048, 1072
RseI CAYNNNNRTG 2 cut(s) 873, 1172
SacI GAGCTC 1 cut(s) 662
SaqAI TTAA 2 cut(s) 300, 900
SatI GCNGC 7 cut(s) 92, 95, 130, 138, 728, 798, 1434
Sau3AI GATC 9 cut(s) 454, 775, 1114, 1416, 1438, 1488, 1644, 1662, 1719
Sau96I GGNCC 2 cut(s) 131, 1497
ScaI AGTACT 1 cut(s) 1049
SchI GAGTC 2 cut(s) 56, 1216
ScrFI CCNGG 3 cut(s) 569, 715, 1629
SduI GDGCHC 2 cut(s) 662, 1204
SfaNI GCATC 2 cut(s) 224, 922
SfcI CTRYAG 2 cut(s) 333, 1216
SfuI TTCGAA 1 cut(s) 610
SinI GGWCC 1 cut(s) 1497
SmiMI CAYNNNNRTG 2 cut(s) 873, 1172
SmlI CTYRAG 1 cut(s) 1400
SmoI CTYRAG 1 cut(s) 1400
SsiI CCGC 7 cut(s) 21, 52, 57, 92, 129, 327, 1495
SspMI CTAG 5 cut(s) 234, 351, 404, 843, 1139
SstI GAGCTC 1 cut(s) 662
StyD4I CCNGG 3 cut(s) 567, 713, 1627
StyI CCWWGG 2 cut(s) 1107, 1167
TaaI ACNGT 3 cut(s) 592, 1345, 1586
TaiI ACGT 2 cut(s) 367, 689
TaqI TCGA 4 cut(s) 453, 504, 610, 939
TatI WGTACW 3 cut(s) 25, 813, 1047
TauI GCSGC 2 cut(s) 94, 132
TfiI GAWTC 6 cut(s) 323, 354, 493, 980, 1611, 1738
Tru1I TTAA 2 cut(s) 300, 900
Tru9I TTAA 2 cut(s) 300, 900
TscAI CASTG 4 cut(s) 595, 1216, 1350, 1591
TseFI GTSAC 4 cut(s) 430, 530, 1522, 1580
TseI GCWGC 5 cut(s) 94, 137, 727, 797, 1433
Tsp45I GTSAC 4 cut(s) 430, 530, 1522, 1580
TspDTI ATGAA 7 cut(s) 193, 221, 775, 776, 1364, 1373, 1472
TspGWI ACGGA 1 cut(s) 1116
TspRI CASTG 4 cut(s) 595, 1216, 1350, 1591
Tth111I GACNNNGTC 1 cut(s) 1501
Van91I CCANNNNNTGG 1 cut(s) 1241
VpaK11BI GGWCC 1 cut(s) 1497
VspI ATTAAT 1 cut(s) 900
XapI RAATTY 3 cut(s) 257, 781, 1570
XbaI TCTAGA 1 cut(s) 1138
XceI RCATGY 1 cut(s) 814
XcmI CCANNNNNNNNNTGG 1 cut(s) 1277
XspI CTAG 5 cut(s) 234, 351, 404, 843, 1139
ZrmI AGTACT 1 cut(s) 1049
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.