RLG00000005512

Aldo/keto reductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0017668
Physical Location & Seq
Forward (+)
68205908 .. 68207145
1238 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005512

Sequence Viewer

Length: 996 bp
ATGGATGAGAGAGGCAAGAAGAAAGTAGTCGTCATCCCGGAAGTAGTACTGAATTCCGGGAAGAAGAAGATGCCGGTGCTAGGCTTTGGCACCGGAGTTTTCGGGAGTCCTCCACCGGCTCAAACCCTGGCTCTTATTCTCCTTGACGCCATTGAGCTTGGCTACCGTCACTTTGACACTGCTGCTCTCTATGGAACCGAAGAAGCCGTAGGTCTCGCCATCACCCAAGCCCTAGACCGAGGTCTCATCAAGACTCGCGATGAGCTGTTCATCACTTCCAAGCTCTGGTGCACTGACGCCCATCATGATCTTGTTCTCCCAGCTCTCAAATTGACACTACAGAGGCTGGGATTGGAGTATGTGGATCTATACCTGATTCATTGGCCGGTGAGGATGAAACAAGGAACTCCGGCAGTACCAAATTCGAAAGAGGACTTGCTTCCCTTTGATATAATGGGGACATGGGAGGCGATGGAAGAGTGCTACAGGCTGGGATTGGCCAAGTCTATTGGCGTCAGCAACTTTGGCACCAAAAAGCTCTCTCAAATCCTTGACAACGGGACCATCCCTCCAGCGGTCAATCAGGTGGAAATGAACCCGTCCTGGCATCAAGGAACTCTGCTGGACTTCTGTAAAGGGAAAGGAATTCATGTGACTGCGTGGTCTCCCTTGGGGTTTTATGGAGCTACCAGCTGGGCTCCAAAACCCTGGATAGACTATGCCATCATTAAGGACATCGCTGCTGCAAAGGGGAAGAGTGTAGCACAGGTTATACTGAGATCCATCATCCAACAAGGAGACGTGAGTGCAATTTCGAGGAGTTTCAACAAGGAGAGGATGAAGGATAATGCTCAAATATTTGATTGGGAGCTAAGTGAGGATGAAATGAACAAGATCAAGGAAATTCCCCAGCGCAGGTTGGGCGTAGGAGACTTCTTCGTTTCCGAAGACGGTCAATACAAATCCCTCGACGACCTTTGGGATGGCAACCCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

332

Amino Acids

36.8

Weight (kDa)

5.92

Isoelectric Point (pI)

36.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 27 - 302 8.4e-48 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017668)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g17900
malus_domestica MD14G1241800.v1.1
rosa_chinensis RchiOBHm_Chr7g0177711
rosa_laevigata RLG00000005512
rosa_multiflora Rmu_sc0004786.1_g000003
rosa_roxburghii Rroxscaffold_3G00275630
rosa_rugosa Rorug06G0408500
rosa_samantha Rh7AG008200 Rh7BG008200 Rh7CG008600 Rh7DG008300
rosa_wichuraiana Rw7G000690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 661
Acc36I ACCTGC 1 cut(s) 906
AccB1I GGYRCC 2 cut(s) 89, 527
AccB7I CCANNNNNTGG 1 cut(s) 285
AccII CGCG 1 cut(s) 258
AciI CCGC 1 cut(s) 575
AclWI GGATC 2 cut(s) 372, 774
AcoI YGGCCR 2 cut(s) 383, 498
AcsI RAATTY 4 cut(s) 52, 421, 645, 903
AcyI GRCGYC 3 cut(s) 147, 297, 513
AfaI GTAC 2 cut(s) 48, 417
AfiI CCNNNNNNNGG 4 cut(s) 80, 285, 574, 915
AgsI TTSAA 1 cut(s) 826
AjiI CACGTC 1 cut(s) 802
AjnI CCWGG 3 cut(s) 126, 602, 707
AluBI AGCT 8 cut(s) 157, 265, 283, 323, 538, 686, 693, 871
AluI AGCT 8 cut(s) 157, 265, 283, 323, 538, 686, 693, 871
Alw21I GWGCWC 1 cut(s) 293
Alw26I GTCTC 5 cut(s) 218, 248, 669, 792, 924
Alw44I GTGCAC 1 cut(s) 289
AlwI GGATC 2 cut(s) 372, 774
AlwNI CAGNNNCTG 1 cut(s) 346
AoxI GGCC 2 cut(s) 383, 498
ApaLI GTGCAC 1 cut(s) 289
ApeKI GCWGC 3 cut(s) 182, 740, 743
ApoI RAATTY 4 cut(s) 52, 421, 645, 903
AspLEI GCGC 1 cut(s) 915
AspS9I GGNCC 1 cut(s) 561
AsuC2I CCSGG 2 cut(s) 38, 58
AsuHPI GGTGA 2 cut(s) 214, 400
AsuII TTCGAA 1 cut(s) 425
AvaII GGWCC 1 cut(s) 561
BaeGI GKGCMC 1 cut(s) 293
BalI TGGCCA 1 cut(s) 500
BanI GGYRCC 2 cut(s) 89, 527
BanII GRGCYC 1 cut(s) 700
BbsI GAAGAC 1 cut(s) 954
Bbv12I GWGCWC 1 cut(s) 293
BbvI GCAGC 3 cut(s) 169, 727, 730
BccI CCATC 7 cut(s) 227, 309, 466, 572, 731, 791, 977
BceAI ACGGC 1 cut(s) 191
BciT130I CCWGG 3 cut(s) 128, 604, 709
BcnI CCSGG 2 cut(s) 38, 58
BcoDI GTCTC 5 cut(s) 218, 248, 669, 792, 924
BfaI CTAG 3 cut(s) 80, 233, 994
BfmI CTRYAG 2 cut(s) 338, 484
BfuAI ACCTGC 1 cut(s) 906
BisI GCNGC 3 cut(s) 183, 741, 744
BlsI GCNGC 3 cut(s) 184, 742, 745
BmcAI AGTACT 1 cut(s) 48
Bme1390I CCNGG 5 cut(s) 38, 58, 128, 604, 709
Bme18I GGWCC 1 cut(s) 561
BmgBI CACGTC 1 cut(s) 802
BmgT120I GGNCC 1 cut(s) 561
BmiI GGNNCC 5 cut(s) 91, 196, 529, 562, 699
BmrFI CCNGG 5 cut(s) 38, 58, 128, 604, 709
BmsI GCATC 2 cut(s) 60, 616
BoxI GACNNNNGTC 1 cut(s) 240
BpiI GAAGAC 1 cut(s) 954
BpmI CTGGAG 1 cut(s) 555
Bpu14I TTCGAA 1 cut(s) 425
BpuMI CCSGG 2 cut(s) 38, 58
BsaHI GRCGYC 3 cut(s) 147, 297, 513
BsaI GGTCTC 3 cut(s) 218, 248, 669
BsaJI CCNNGG 4 cut(s) 126, 238, 669, 707
BsaWI WCCGGW 1 cut(s) 92
BsaXI ACNNNNNCTCC 2 cut(s) 553, 583
Bsc4I CCNNNNNNNGG 4 cut(s) 80, 285, 574, 915
Bse118I RCCGGY 3 cut(s) 73, 115, 385
BseBI CCWGG 3 cut(s) 128, 604, 709
BseDI CCNNGG 4 cut(s) 126, 238, 669, 707
BseGI GGATG 8 cut(s) 10, 33, 399, 564, 786, 843, 886, 988
BseLI CCNNNNNNNGG 4 cut(s) 80, 285, 574, 915
BseMII CTCAG 1 cut(s) 767
BseRI GAGGAG 1 cut(s) 832
BseSI GKGCMC 1 cut(s) 293
BseXI GCAGC 3 cut(s) 169, 727, 730
BseYI CCCAGC 5 cut(s) 319, 346, 490, 693, 909
Bsh1236I CGCG 1 cut(s) 258
BshFI GGCC 2 cut(s) 385, 500
BshNI GGYRCC 2 cut(s) 89, 527
BsiHKAI GWGCWC 1 cut(s) 293
BsiSI CCGG 7 cut(s) 38, 57, 74, 93, 116, 386, 410
BslFI GGGAC 2 cut(s) 472, 574
BslI CCNNNNNNNGG 4 cut(s) 80, 285, 574, 915
BsmAI GTCTC 5 cut(s) 218, 248, 669, 792, 924
BsmBI CGTCTC 1 cut(s) 792
BsmFI GGGAC 2 cut(s) 472, 574
BsnI GGCC 2 cut(s) 385, 500
Bso31I GGTCTC 3 cut(s) 218, 248, 669
Bsp119I TTCGAA 1 cut(s) 425
Bsp1286I GDGCHC 2 cut(s) 293, 700
Bsp143I GATC 4 cut(s) 307, 364, 779, 894
Bsp68I TCGCGA 1 cut(s) 258
BspACI CCGC 1 cut(s) 575
BspANI GGCC 2 cut(s) 385, 500
BspCNI CTCAG 1 cut(s) 768
BspFNI CGCG 1 cut(s) 258
BspHI TCATGA 1 cut(s) 304
BspLI GGNNCC 5 cut(s) 91, 196, 529, 562, 699
BspMI ACCTGC 1 cut(s) 906
BspPI GGATC 2 cut(s) 372, 774
BspT104I TTCGAA 1 cut(s) 425
BspT107I GGYRCC 2 cut(s) 89, 527
BspTNI GGTCTC 3 cut(s) 218, 248, 669
BsrFI RCCGGY 3 cut(s) 73, 115, 385
BssAI RCCGGY 3 cut(s) 73, 115, 385
BssECI CCNNGG 4 cut(s) 126, 238, 669, 707
BssMI GATC 4 cut(s) 307, 364, 779, 894
BssNI GRCGYC 3 cut(s) 147, 297, 513
BssT1I CCWWGG 1 cut(s) 669
Bst2UI CCWGG 3 cut(s) 128, 604, 709
Bst4CI ACNGT 2 cut(s) 167, 953
Bst6I CTCTTC 2 cut(s) 471, 749
BstACI GRCGYC 3 cut(s) 147, 297, 513
BstBI TTCGAA 1 cut(s) 425
BstDEI CTNAG 2 cut(s) 776, 872
BstF5I GGATG 8 cut(s) 10, 33, 399, 564, 786, 843, 886, 988
BstFNI CGCG 1 cut(s) 258
BstHHI GCGC 1 cut(s) 915
BstKTI GATC 4 cut(s) 310, 367, 782, 897
BstMAI GTCTC 5 cut(s) 218, 248, 669, 792, 924
BstMBI GATC 4 cut(s) 307, 364, 779, 894
BstMWI GCNNNNNNNGC 2 cut(s) 525, 921
BstNI CCWGG 3 cut(s) 128, 604, 709
BstPAI GACNNNNGTC 1 cut(s) 240
BstSCI CCNGG 5 cut(s) 36, 56, 126, 602, 707
BstSFI CTRYAG 2 cut(s) 338, 484
BstSLI GKGCMC 1 cut(s) 293
BstUI CGCG 1 cut(s) 258
BstV1I GCAGC 3 cut(s) 169, 727, 730
BstV2I GAAGAC 1 cut(s) 954
BstX2I RGATCY 2 cut(s) 364, 779
BstXI CCANNNNNNTGG 1 cut(s) 708
BstYI RGATCY 2 cut(s) 364, 779
BsuRI GGCC 2 cut(s) 385, 500
BtgZI GCGATG 3 cut(s) 273, 485, 721
BtrI CACGTC 1 cut(s) 802
BtsCI GGATG 8 cut(s) 10, 33, 399, 564, 786, 843, 886, 988
BtsI GCAGTG 1 cut(s) 177
BtsIMutI CAGTG 2 cut(s) 177, 291
BtuMI TCGCGA 1 cut(s) 258
BveI ACCTGC 1 cut(s) 906
CaiI CAGNNNCTG 1 cut(s) 346
CciI TCATGA 1 cut(s) 304
CfoI GCGC 1 cut(s) 915
Cfr10I RCCGGY 3 cut(s) 73, 115, 385
Cfr13I GGNCC 1 cut(s) 561
CseI GACGC 3 cut(s) 155, 305, 502
Csp6I GTAC 2 cut(s) 47, 416
CviAII CATG 3 cut(s) 305, 462, 650
CviQI GTAC 2 cut(s) 47, 416
DdeI CTNAG 2 cut(s) 776, 872
DpnI GATC 4 cut(s) 309, 366, 781, 896
DpnII GATC 4 cut(s) 307, 364, 779, 894
DrdI GACNNNNNNGTC 1 cut(s) 661
DseDI GACNNNNNNGTC 1 cut(s) 661
EaeI YGGCCR 2 cut(s) 383, 498
Eam1104I CTCTTC 2 cut(s) 471, 749
EarI CTCTTC 2 cut(s) 471, 749
Eco130I CCWWGG 1 cut(s) 669
Eco24I GRGCYC 1 cut(s) 700
Eco31I GGTCTC 3 cut(s) 218, 248, 669
Eco47I GGWCC 1 cut(s) 561
EcoRI GAATTC 2 cut(s) 52, 645
EcoRII CCWGG 3 cut(s) 126, 602, 707
EcoT14I CCWWGG 1 cut(s) 669
EcoT38I GRGCYC 1 cut(s) 700
ErhI CCWWGG 1 cut(s) 669
Esp3I CGTCTC 1 cut(s) 792
FaeI CATG 3 cut(s) 308, 465, 653
FaqI GGGAC 2 cut(s) 472, 574
FatI CATG 3 cut(s) 304, 461, 649
Fnu4HI GCNGC 3 cut(s) 183, 741, 744
FokI GGATG 7 cut(s) 17, 20, 406, 551, 773, 850, 893
FriOI GRGCYC 1 cut(s) 700
Fsp4HI GCNGC 3 cut(s) 183, 741, 744
FspBI CTAG 3 cut(s) 80, 233, 994
GlaI GCGC 1 cut(s) 914
GluI GCNGC 3 cut(s) 183, 741, 744
GsaI CCCAGC 5 cut(s) 323, 350, 494, 697, 913
GsuI CTGGAG 1 cut(s) 555
HaeIII GGCC 2 cut(s) 385, 500
HapII CCGG 7 cut(s) 38, 57, 74, 93, 116, 386, 410
HgaI GACGC 3 cut(s) 155, 305, 502
HhaI GCGC 1 cut(s) 915
Hin1I GRCGYC 3 cut(s) 147, 297, 513
Hin1II CATG 3 cut(s) 308, 465, 653
Hin6I GCGC 1 cut(s) 913
HinP1I GCGC 1 cut(s) 913
HinfI GANTC 3 cut(s) 106, 253, 376
HpaII CCGG 7 cut(s) 38, 57, 74, 93, 116, 386, 410
HphI GGTGA 2 cut(s) 214, 400
Hpy166II GTNNAC 1 cut(s) 291
Hpy188I TCNGA 1 cut(s) 946
Hpy188III TCNNGA 4 cut(s) 103, 250, 257, 305
Hpy8I GTNNAC 1 cut(s) 291
Hpy99I CGWCG 1 cut(s) 974
HpyAV CCTTC 1 cut(s) 835
HpyCH4III ACNGT 2 cut(s) 167, 953
HpyCH4IV ACGT 1 cut(s) 801
HpyCH4V TGCA 3 cut(s) 291, 746, 809
HpyF10VI GCNNNNNNNGC 2 cut(s) 525, 921
HpyF3I CTNAG 2 cut(s) 776, 872
HpySE526I ACGT 1 cut(s) 801
Hsp92I GRCGYC 3 cut(s) 147, 297, 513
Hsp92II CATG 3 cut(s) 308, 465, 653
HspAI GCGC 1 cut(s) 913
Kzo9I GATC 4 cut(s) 307, 364, 779, 894
LmnI GCTCC 3 cut(s) 683, 703, 868
Lsp1109I GCAGC 3 cut(s) 169, 727, 730
LweI GCATC 2 cut(s) 60, 616
MaeI CTAG 3 cut(s) 80, 233, 994
MaeII ACGT 1 cut(s) 801
MaeIII GTNAC 2 cut(s) 167, 652
MalI GATC 4 cut(s) 309, 366, 781, 896
MboI GATC 4 cut(s) 307, 364, 779, 894
MboII GAAGA 9 cut(s) 31, 73, 76, 79, 212, 488, 766, 928, 959
MflI RGATCY 2 cut(s) 364, 779
MhlI GDGCHC 2 cut(s) 293, 700
MlsI TGGCCA 1 cut(s) 500
MluCI AATT 6 cut(s) 52, 329, 421, 645, 810, 903
MluNI TGGCCA 1 cut(s) 500
MlyI GAGTC 2 cut(s) 115, 247
MmeI TCCRAC 1 cut(s) 814
Mox20I TGGCCA 1 cut(s) 500
MscI TGGCCA 1 cut(s) 500
MseI TTAA 1 cut(s) 729
Msp20I TGGCCA 1 cut(s) 500
MspA1I CMGCKG 2 cut(s) 575, 693
MspI CCGG 7 cut(s) 38, 57, 74, 93, 116, 386, 410
MspR9I CCNGG 5 cut(s) 38, 58, 128, 604, 709
MvaI CCWGG 3 cut(s) 128, 604, 709
MvnI CGCG 1 cut(s) 258
MwoI GCNNNNNNNGC 2 cut(s) 525, 921
NciI CCSGG 2 cut(s) 38, 58
NdeII GATC 4 cut(s) 307, 364, 779, 894
NlaIII CATG 3 cut(s) 308, 465, 653
NlaIV GGNNCC 5 cut(s) 91, 196, 529, 562, 699
NmuCI GTSAC 2 cut(s) 167, 652
NruI TCGCGA 1 cut(s) 258
NspV TTCGAA 1 cut(s) 425
PagI TCATGA 1 cut(s) 304
PfeI GAWTC 1 cut(s) 376
PflMI CCANNNNNTGG 1 cut(s) 285
PfoI TCCNGGA 2 cut(s) 36, 56
PkrI GCNGC 3 cut(s) 184, 742, 745
PleI GAGTC 2 cut(s) 114, 247
PpsI GAGTC 2 cut(s) 114, 247
PshAI GACNNNNGTC 1 cut(s) 240
Psp6I CCWGG 3 cut(s) 126, 602, 707
PspFI CCCAGC 5 cut(s) 319, 346, 490, 693, 909
PspGI CCWGG 3 cut(s) 126, 602, 707
PspN4I GGNNCC 5 cut(s) 91, 196, 529, 562, 699
PspPI GGNCC 1 cut(s) 561
PstNI CAGNNNCTG 1 cut(s) 346
PsuI RGATCY 2 cut(s) 364, 779
PvuII CAGCTG 1 cut(s) 693
RruI TCGCGA 1 cut(s) 258
RsaI GTAC 2 cut(s) 48, 417
RsaNI GTAC 2 cut(s) 47, 416
SaqAI TTAA 1 cut(s) 729
SatI GCNGC 3 cut(s) 183, 741, 744
Sau3AI GATC 4 cut(s) 307, 364, 779, 894
Sau96I GGNCC 1 cut(s) 561
ScaI AGTACT 1 cut(s) 48
SchI GAGTC 2 cut(s) 115, 247
ScrFI CCNGG 5 cut(s) 38, 58, 128, 604, 709
SduI GDGCHC 2 cut(s) 293, 700
SfaNI GCATC 2 cut(s) 60, 616
SfcI CTRYAG 2 cut(s) 338, 484
SfuI TTCGAA 1 cut(s) 425
SinI GGWCC 1 cut(s) 561
Sse9I AATT 6 cut(s) 52, 329, 421, 645, 810, 903
SsiI CCGC 1 cut(s) 575
SspI AATATT 1 cut(s) 858
SspMI CTAG 3 cut(s) 80, 233, 994
StyD4I CCNGG 5 cut(s) 36, 56, 126, 602, 707
StyI CCWWGG 1 cut(s) 669
TaaI ACNGT 2 cut(s) 167, 953
TaiI ACGT 1 cut(s) 804
TaqI TCGA 3 cut(s) 425, 815, 969
TaqII GACCGA 1 cut(s) 252
TasI AATT 6 cut(s) 52, 329, 421, 645, 810, 903
TatI WGTACW 1 cut(s) 46
TfiI GAWTC 1 cut(s) 376
Tru1I TTAA 1 cut(s) 729
Tru9I TTAA 1 cut(s) 729
TscAI CASTG 2 cut(s) 184, 298
TseFI GTSAC 2 cut(s) 167, 652
TseI GCWGC 3 cut(s) 182, 740, 743
Tsp45I GTSAC 2 cut(s) 167, 652
TspDTI ATGAA 8 cut(s) 259, 368, 410, 608, 638, 854, 897, 902
TspRI CASTG 2 cut(s) 184, 298
Van91I CCANNNNNTGG 1 cut(s) 285
VneI GTGCAC 1 cut(s) 289
VpaK11BI GGWCC 1 cut(s) 561
XapI RAATTY 4 cut(s) 52, 421, 645, 903
XspI CTAG 3 cut(s) 80, 233, 994
ZrmI AGTACT 1 cut(s) 48
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.