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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g28000 |
| rosa_laevigata | RLG00000006564 |
| rosa_roxburghii | Rroxscaffold_5G00376920 |
| rosa_rugosa | Rorug04G0288900 |
| rosa_samantha | Rh4AG343400 Rh4BG351900 Rh4BG352000 Rh4CG366500 Rh4DG346000 |
| rosa_wichuraiana | Rw4G029980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 405 |
| AciI | CCGC | 1 cut(s) | 89 |
| AcsI | RAATTY | 1 cut(s) | 78 |
| AcuI | CTGAAG | 1 cut(s) | 116 |
| AcyI | GRCGYC | 1 cut(s) | 406 |
| AdeI | CACNNNGTG | 1 cut(s) | 252 |
| AflII | CTTAAG | 1 cut(s) | 217 |
| AgsI | TTSAA | 2 cut(s) | 289, 299 |
| AluBI | AGCT | 5 cut(s) | 45, 211, 316, 349, 445 |
| AluI | AGCT | 5 cut(s) | 45, 211, 316, 349, 445 |
| Alw26I | GTCTC | 1 cut(s) | 26 |
| ApoI | RAATTY | 1 cut(s) | 78 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 214, 246 |
| AspLEI | GCGC | 1 cut(s) | 408 |
| AsuHPI | GGTGA | 1 cut(s) | 298 |
| BanI | GGYRCC | 1 cut(s) | 405 |
| BccI | CCATC | 2 cut(s) | 116, 140 |
| BcoDI | GTCTC | 1 cut(s) | 26 |
| BfaI | CTAG | 1 cut(s) | 173 |
| BfoI | RGCGCY | 1 cut(s) | 409 |
| BfrI | CTTAAG | 1 cut(s) | 217 |
| BmiI | GGNNCC | 1 cut(s) | 407 |
| BmsI | GCATC | 2 cut(s) | 119, 140 |
| BpuEI | CTTGAG | 1 cut(s) | 286 |
| BsaHI | GRCGYC | 1 cut(s) | 406 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 338, 368 |
| BseGI | GGATG | 2 cut(s) | 134, 155 |
| BseMII | CTCAG | 1 cut(s) | 452 |
| BseRI | GAGGAG | 1 cut(s) | 359 |
| BshNI | GGYRCC | 1 cut(s) | 405 |
| BsmAI | GTCTC | 1 cut(s) | 26 |
| Bsp143I | GATC | 1 cut(s) | 383 |
| BspACI | CCGC | 1 cut(s) | 89 |
| BspCNI | CTCAG | 1 cut(s) | 451 |
| BspLI | GGNNCC | 1 cut(s) | 407 |
| BspT107I | GGYRCC | 1 cut(s) | 405 |
| BspTI | CTTAAG | 1 cut(s) | 217 |
| BssMI | GATC | 1 cut(s) | 383 |
| BssNI | GRCGYC | 1 cut(s) | 406 |
| Bst4CI | ACNGT | 1 cut(s) | 58 |
| BstACI | GRCGYC | 1 cut(s) | 406 |
| BstAFI | CTTAAG | 1 cut(s) | 217 |
| BstDEI | CTNAG | 2 cut(s) | 310, 438 |
| BstF5I | GGATG | 2 cut(s) | 134, 155 |
| BstH2I | RGCGCY | 1 cut(s) | 409 |
| BstHHI | GCGC | 1 cut(s) | 408 |
| BstKTI | GATC | 1 cut(s) | 386 |
| BstMAI | GTCTC | 1 cut(s) | 26 |
| BstMBI | GATC | 1 cut(s) | 383 |
| BtsCI | GGATG | 2 cut(s) | 134, 155 |
| CfoI | GCGC | 1 cut(s) | 408 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 49, 84 |
| CviJI | RGCY | 5 cut(s) | 45, 211, 316, 349, 445 |
| CviKI_1 | RGCY | 5 cut(s) | 45, 211, 316, 349, 445 |
| DdeI | CTNAG | 2 cut(s) | 310, 438 |
| DinI | GGCGCC | 1 cut(s) | 407 |
| DpnI | GATC | 1 cut(s) | 385 |
| DpnII | GATC | 1 cut(s) | 383 |
| DraIII | CACNNNGTG | 1 cut(s) | 252 |
| Eco57I | CTGAAG | 1 cut(s) | 116 |
| EgeI | GGCGCC | 1 cut(s) | 407 |
| EheI | GGCGCC | 1 cut(s) | 407 |
| FaiI | YATR | 6 cut(s) | 138, 189, 191, 340, 353, 451 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 195, 227, 200, 232 |
| FokI | GGATG | 2 cut(s) | 141, 162 |
| FspBI | CTAG | 1 cut(s) | 173 |
| GlaI | GCGC | 1 cut(s) | 407 |
| HaeII | RGCGCY | 1 cut(s) | 409 |
| HhaI | GCGC | 1 cut(s) | 408 |
| Hin1I | GRCGYC | 1 cut(s) | 406 |
| Hin6I | GCGC | 1 cut(s) | 406 |
| HinP1I | GCGC | 1 cut(s) | 406 |
| HincII | GTYRAC | 1 cut(s) | 169 |
| HindII | GTYRAC | 1 cut(s) | 169 |
| HindIII | AAGCTT | 2 cut(s) | 209, 443 |
| HinfI | GANTC | 3 cut(s) | 85, 193, 303 |
| HphI | GGTGA | 1 cut(s) | 298 |
| Hpy166II | GTNNAC | 1 cut(s) | 169 |
| Hpy188I | TCNGA | 2 cut(s) | 434, 441 |
| Hpy188III | TCNNGA | 1 cut(s) | 242 |
| Hpy8I | GTNNAC | 1 cut(s) | 169 |
| HpyAV | CCTTC | 1 cut(s) | 276 |
| HpyCH4III | ACNGT | 1 cut(s) | 58 |
| HpyCH4V | TGCA | 2 cut(s) | 132, 153 |
| HpyF3I | CTNAG | 2 cut(s) | 310, 438 |
| Hsp92I | GRCGYC | 1 cut(s) | 406 |
| HspAI | GCGC | 1 cut(s) | 406 |
| KasI | GGCGCC | 1 cut(s) | 405 |
| Kzo9I | GATC | 1 cut(s) | 383 |
| LmnI | GCTCC | 1 cut(s) | 346 |
| LpnPI | CCDG | 2 cut(s) | 51, 227 |
| LweI | GCATC | 2 cut(s) | 119, 140 |
| MaeI | CTAG | 1 cut(s) | 173 |
| MalI | GATC | 1 cut(s) | 385 |
| MboI | GATC | 1 cut(s) | 383 |
| MboII | GAAGA | 2 cut(s) | 312, 374 |
| MluCI | AATT | 2 cut(s) | 78, 184 |
| Mly113I | GGCGCC | 1 cut(s) | 406 |
| MlyI | GAGTC | 1 cut(s) | 94 |
| MnlI | CCTC | 3 cut(s) | 37, 337, 383 |
| MseI | TTAA | 4 cut(s) | 104, 162, 218, 426 |
| MspCI | CTTAAG | 1 cut(s) | 217 |
| NarI | GGCGCC | 1 cut(s) | 406 |
| NdeII | GATC | 1 cut(s) | 383 |
| NlaIV | GGNNCC | 1 cut(s) | 407 |
| PfeI | GAWTC | 2 cut(s) | 193, 303 |
| PleI | GAGTC | 1 cut(s) | 93 |
| PluTI | GGCGCC | 1 cut(s) | 409 |
| PpsI | GAGTC | 1 cut(s) | 93 |
| PspN4I | GGNNCC | 1 cut(s) | 407 |
| SaqAI | TTAA | 4 cut(s) | 104, 162, 218, 426 |
| Sau3AI | GATC | 1 cut(s) | 383 |
| SchI | GAGTC | 1 cut(s) | 94 |
| SetI | ASST | 9 cut(s) | 47, 70, 174, 213, 287, 311, 318, 351, 447 |
| SfaNI | GCATC | 2 cut(s) | 119, 140 |
| SfoI | GGCGCC | 1 cut(s) | 407 |
| SmlI | CTYRAG | 2 cut(s) | 217, 265 |
| SmoI | CTYRAG | 2 cut(s) | 217, 265 |
| Sse9I | AATT | 2 cut(s) | 78, 184 |
| SsiI | CCGC | 1 cut(s) | 89 |
| SspDI | GGCGCC | 1 cut(s) | 405 |
| SspI | AATATT | 1 cut(s) | 111 |
| SspMI | CTAG | 1 cut(s) | 173 |
| TaaI | ACNGT | 1 cut(s) | 58 |
| TaqI | TCGA | 1 cut(s) | 83 |
| TasI | AATT | 2 cut(s) | 78, 184 |
| TfiI | GAWTC | 2 cut(s) | 193, 303 |
| Tru1I | TTAA | 4 cut(s) | 104, 162, 218, 426 |
| Tru9I | TTAA | 4 cut(s) | 104, 162, 218, 426 |
| TspDTI | ATGAA | 1 cut(s) | 206 |
| Vha464I | CTTAAG | 1 cut(s) | 217 |
| XapI | RAATTY | 1 cut(s) | 78 |
| XspI | CTAG | 1 cut(s) | 173 |