RLG00000006735

Clathrin assembly protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0012835
Physical Location & Seq
Reverse (-)
10049096 .. 10054419
5324 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000006735

Sequence Viewer

Length: 1803 bp
ATGAAACTCTGGAAAAAAGCTGCCGGGCTTGTCAAGGACCGTAACAGCATCTGGGCCGCCAGCATTTCCCGCCGGACCTCTTTCCGCAAGCCCGACCTAGAATCCATCGTCATCAAGTCCACCAGCCACGACGAGGCTCACGTCGACTATAAGAATTTCCACCGCGTCTACCAATGGGTGCGCACCTCTCCTACGTACGTAAAGCCATTGTTGTGGGCTATCTCCTCCAGAATGGACAAGACCAGGTCCTGGGTGGTGGCCCTCAAGGGATTGATGCTCATGCACGGCGTCTTCTGCTGCAAGATCCCCGCCGTGCAGAGGATCGGGCGGCTGCCGTTTGATCTATCCAACTTTACGGACGGCCACTCCAAGCCGAGCAAGACATGGGCCTACAACGCCTTCGTGCGGGCGTATTTTACCTACTTGGACCACAGATCCGCTTTCCTGCATGAGACGGCGTCGTCGGCTGTGGCGTTTAGGAAACAGCAACAGCTGGGGAGATTACAAGCCGGCGGTCTTGACATTCAGTCTCCGGAGGAGGAGCCTCCGTTGAAGGAGGAGCTCGGGAAGCTTCGGAAATGGCAGGCATTGATGGATATGTTGCTACAGATCAGGCCCAACCCCGGCACGGCAAAGGTGTATCTGGTTTTCGAAGCCATGATCTGCATTTTGACCGAGATCTTCGACGTCTACAGCAGAATTTGCAAGGGTATTGCTAGAACTCTGATGAGGATTTATACGGCGCCGGGCAAAGAAGAGGCGCAAATGGCTCTCGAGGTGGTTCAGAAGGCGGCGATTCAAGGAGAGGAGCTCGAAATGTACCTTGAGTTCTGCAGGGATTTGGGCGCTCTTGGCTCTTCGGAGTGCCCTAAAGTGGAGCACATCCCGGAGGAAGATATTAGAGACCTAGAAAGAATAATACACGAAGTTAGTGATGATGCGGGAAAGGAAAAGAGGAAGGAGAACCAAAACAACTGCATGGAGATTGTGGCGATAGAAAGCGGTGGTGATGATTTGTTAATGTTTGGTGATGATCATGGTCAGCAGACGACGACGAAGAATAAGCAGAAGGTGTTCAAGACTATAATCACAGACAAGTGGGAGGTGTTTCCTGATGACGATATGATCAGCTGGTACTTAGAATACACACCCTTGGAGCGATTAAATGATTTCTTTAGTCATTTAAATCTTGGAGAGAGAACCATTAAGGGATGTCTTGAAGCTTACTCTTGTAAACACACGGGATCGGATAAGAAACTGTCTCTGAGTTTGGAGAATGAGATTCTTGACTATATCGGAAAATCTTCTGACACTGACTCTTCCTCACCTGCTGAGTTCCTTCTGAGCAGATCCAGCCGGAAGACATTGATTTACCTGGTCTTGACCCTCTATCACTTGTATCCGGACTATGACTTCAGTGCCATCAACGCTCACCAGTTCTTCACAGAGGAAACCTGGGACAGTTTTAAGCAGATTTTTGATACCTATATGGTGGAAGCATCAAAGGAATGGACAGAGACAAATGAGGGTAGTTCCCTGCTGGATACCTTGTACAAGGCTTTGGATGAGGTTGTTGGATTAGCAGATTGTGAAGTTTATGGTTACAATCCTGATCCTGATGCTGATCCGTTTCCGGAAAGAGGAGCTGTATGGTCATTCAATTTCTTTTTCTACAATAGAAAACTGAAAAGGGTTGTGAGTTTCCGTATCTGCTGTTTAAGTAACTTGGTGACTGATGGGTTTATAATGGATGATCTCCGTTATGAGGAAGATGGAGAAATTTTTGGTGTCATGGATATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANTH

Protein Analysis

601

Amino Acids

69.03

Weight (kDa)

5.38

Isoelectric Point (pI)

35.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANTH PF07651 32 - 308 8.3e-57 ANTH domain
Maf1 PF09174 402 - 568 1e-50 Maf1 regulator
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012835)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G25240 AT1G25240 AT1G68110
fragaria_vesca FvH4_4g26150
malus_domestica MD13G1015400.v1.1 MD16G1012900.v1.1
prunus_persica Prupe.1G338400_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0433721
rosa_laevigata RLG00000006735
rosa_multiflora Rmu_co8405197.1_g000001 Rmu_sc0000312.1_g000027
rosa_roxburghii Rroxscaffold_5G00375160
rosa_rugosa Rorug04G0271200.1
rosa_samantha Rh4AG325500 Rh4BG333300 Rh4CG348500 Rh4DG329900
rosa_wichuraiana Rw4G028190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1745
AarI CACCTGC 1 cut(s) 1336
AasI GACNNNNNNGTC 1 cut(s) 460
AatII GACGTC 1 cut(s) 690
Acc16I TGCGCA 1 cut(s) 182
Acc36I ACCTGC 1 cut(s) 1336
AccB1I GGYRCC 1 cut(s) 742
AccB7I CCANNNNNTGG 1 cut(s) 249
AccI GTMKAC 3 cut(s) 144, 168, 690
AccII CGCG 1 cut(s) 165
AccIII TCCGGA 3 cut(s) 532, 1402, 1633
AclWI GGATC 7 cut(s) 298, 329, 429, 1252, 1344, 1607, 1619
AcoI YGGCCR 1 cut(s) 361
AcsI RAATTY 3 cut(s) 154, 699, 1779
AcuI CTGAAG 1 cut(s) 1399
AcyI GRCGYC 4 cut(s) 288, 458, 687, 743
AfaI GTAC 4 cut(s) 197, 821, 1136, 1553
AfiI CCNNNNNNNGG 9 cut(s) 133, 249, 318, 405, 623, 628, 874, 1640, 1765
AgsI TTSAA 5 cut(s) 553, 800, 1078, 1220, 1660
AhdI GACNNNNNGTC 1 cut(s) 526
AjiI CACGTC 1 cut(s) 142
AjnI CCWGG 4 cut(s) 242, 248, 1374, 1454
AluBI AGCT 8 cut(s) 20, 493, 562, 571, 811, 1131, 1223, 1646
AluI AGCT 8 cut(s) 20, 493, 562, 571, 811, 1131, 1223, 1646
Alw21I GWGCWC 3 cut(s) 564, 813, 882
Alw26I GTCTC 5 cut(s) 446, 534, 897, 1266, 1511
AlwI GGATC 7 cut(s) 298, 329, 429, 1252, 1344, 1607, 1619
AlwNI CAGNNNCTG 2 cut(s) 51, 249
Ama87I CYCGRG 2 cut(s) 563, 773
Aor13HI TCCGGA 3 cut(s) 532, 1402, 1633
AoxI GGCC 5 cut(s) 54, 258, 361, 387, 614
ApeKI GCWGC 3 cut(s) 20, 297, 331
ApoI RAATTY 3 cut(s) 154, 699, 1779
Asp700I GAANNNNTTC 2 cut(s) 1073, 1303
AspLEI GCGC 4 cut(s) 183, 745, 763, 848
AspS9I GGNCC 8 cut(s) 37, 54, 75, 246, 259, 387, 427, 615
AsuC2I CCSGG 4 cut(s) 25, 624, 747, 887
AsuHPI GGTGA 5 cut(s) 1019, 1040, 1317, 1424, 1741
AsuII TTCGAA 1 cut(s) 651
AvaI CYCGRG 2 cut(s) 563, 773
AvaII GGWCC 4 cut(s) 37, 75, 246, 427
BaeGI GKGCMC 1 cut(s) 869
BanI GGYRCC 1 cut(s) 742
BanII GRGCYC 2 cut(s) 564, 813
BbsI GAAGAC 2 cut(s) 283, 1367
Bbv12I GWGCWC 3 cut(s) 564, 813, 882
BbvI GCAGC 3 cut(s) 7, 284, 318
BccI CCATC 5 cut(s) 113, 586, 1430, 1730, 1766
BceAI ACGGC 7 cut(s) 296, 301, 319, 376, 471, 645, 756
BciT130I CCWGG 4 cut(s) 244, 250, 1376, 1456
BciVI GTATCC 2 cut(s) 1410, 1537
BclI TGATCA 2 cut(s) 1033, 1125
BcnI CCSGG 4 cut(s) 25, 624, 747, 887
BcoDI GTCTC 5 cut(s) 446, 534, 897, 1266, 1511
BfaI CTAG 3 cut(s) 98, 717, 908
BfmI CTRYAG 3 cut(s) 605, 691, 832
BfoI RGCGCY 2 cut(s) 746, 849
BfuAI ACCTGC 1 cut(s) 1336
BfuI GTATCC 2 cut(s) 1410, 1537
BglII AGATCT 1 cut(s) 678
BisI GCNGC 6 cut(s) 21, 57, 298, 329, 332, 792
BlsI GCNGC 6 cut(s) 22, 58, 299, 330, 333, 793
Bme1390I CCNGG 8 cut(s) 25, 244, 250, 624, 747, 887, 1376, 1456
Bme18I GGWCC 4 cut(s) 37, 75, 246, 427
BmeRI GACNNNNNGTC 1 cut(s) 526
BmeT110I CYCGRG 2 cut(s) 563, 773
BmgBI CACGTC 1 cut(s) 142
BmgT120I GGNCC 8 cut(s) 37, 54, 75, 246, 259, 387, 427, 615
BmiI GGNNCC 2 cut(s) 543, 744
BmrFI CCNGG 8 cut(s) 25, 244, 250, 624, 747, 887, 1376, 1456
BmsI GCATC 5 cut(s) 57, 264, 928, 1508, 1609
BpiI GAAGAC 2 cut(s) 283, 1367
BplI GAGNNNNNCTC 2 cut(s) 795, 827
BpmI CTGGAG 1 cut(s) 211
Bpu14I TTCGAA 1 cut(s) 651
BpuEI CTTGAG 2 cut(s) 248, 845
BpuMI CCSGG 4 cut(s) 25, 624, 747, 887
BsaAI YACGTR 2 cut(s) 195, 199
BsaBI GATNNNNATC 1 cut(s) 1623
BsaHI GRCGYC 4 cut(s) 288, 458, 687, 743
BsaI GGTCTC 1 cut(s) 897
BsaJI CCNNGG 4 cut(s) 249, 622, 1152, 1455
BsaWI WCCGGW 3 cut(s) 532, 1402, 1633
BsaXI ACNNNNNCTCC 4 cut(s) 350, 380, 533, 563
Bsc4I CCNNNNNNNGG 9 cut(s) 133, 249, 318, 405, 623, 628, 874, 1640, 1765
Bse118I RCCGGY 1 cut(s) 509
Bse1I ACTGG 1 cut(s) 1435
Bse8I GATNNNNATC 1 cut(s) 1623
BseAI TCCGGA 3 cut(s) 532, 1402, 1633
BseBI CCWGG 4 cut(s) 244, 250, 1376, 1456
BseDI CCNNGG 4 cut(s) 249, 622, 1152, 1455
BseGI GGATG 4 cut(s) 882, 1217, 1570, 1756
BseJI GATNNNNATC 1 cut(s) 1623
BseLI CCNNNNNNNGG 9 cut(s) 133, 249, 318, 405, 623, 628, 874, 1640, 1765
BseMII CTCAG 3 cut(s) 1256, 1323, 1334
BseNI ACTGG 1 cut(s) 1435
BseRI GAGGAG 6 cut(s) 214, 551, 554, 572, 821, 1656
BseSI GKGCMC 1 cut(s) 869
BseXI GCAGC 3 cut(s) 7, 284, 318
BseYI CCCAGC 1 cut(s) 493
BsgI GTGCAG 1 cut(s) 335
Bsh1236I CGCG 1 cut(s) 165
BshFI GGCC 5 cut(s) 56, 260, 363, 389, 616
BshNI GGYRCC 1 cut(s) 742
BsiHKAI GWGCWC 3 cut(s) 564, 813, 882
BsiHKCI CYCGRG 2 cut(s) 563, 773
BsiWI CGTACG 1 cut(s) 195
BslFI GGGAC 1 cut(s) 1472
BslI CCNNNNNNNGG 9 cut(s) 133, 249, 318, 405, 623, 628, 874, 1640, 1765
BsmAI GTCTC 5 cut(s) 446, 534, 897, 1266, 1511
BsmBI CGTCTC 1 cut(s) 446
BsmFI GGGAC 1 cut(s) 1472
BsnI GGCC 5 cut(s) 56, 260, 363, 389, 616
Bso31I GGTCTC 1 cut(s) 897
BsoBI CYCGRG 2 cut(s) 563, 773
Bsp119I TTCGAA 1 cut(s) 651
Bsp1286I GDGCHC 4 cut(s) 564, 813, 869, 882
Bsp13I TCCGGA 3 cut(s) 532, 1402, 1633
Bsp1407I TGTACA 1 cut(s) 1551
BspANI GGCC 5 cut(s) 56, 260, 363, 389, 616
BspCNI CTCAG 3 cut(s) 1257, 1324, 1335
BspEI TCCGGA 3 cut(s) 532, 1402, 1633
BspFNI CGCG 1 cut(s) 165
BspLI GGNNCC 2 cut(s) 543, 744
BspMAI CTGCAG 1 cut(s) 836
BspMI ACCTGC 1 cut(s) 1336
BspPI GGATC 7 cut(s) 298, 329, 429, 1252, 1344, 1607, 1619
BspQI GCTCTTC 1 cut(s) 862
BspT104I TTCGAA 1 cut(s) 651
BspT107I GGYRCC 1 cut(s) 742
BspTNI GGTCTC 1 cut(s) 897
BsrFI RCCGGY 1 cut(s) 509
BsrGI TGTACA 1 cut(s) 1551
BsrI ACTGG 1 cut(s) 1435
BssAI RCCGGY 1 cut(s) 509
BssECI CCNNGG 4 cut(s) 249, 622, 1152, 1455
BssNI GRCGYC 4 cut(s) 288, 458, 687, 743
BssT1I CCWWGG 1 cut(s) 1152
Bst2UI CCWGG 4 cut(s) 244, 250, 1376, 1456
Bst4CI ACNGT 3 cut(s) 41, 1260, 1463
Bst6I CTCTTC 3 cut(s) 750, 862, 1324
BstACI GRCGYC 4 cut(s) 288, 458, 687, 743
BstAPI GCANNNNNTGC 1 cut(s) 702
BstAUI TGTACA 1 cut(s) 1551
BstBAI YACGTR 2 cut(s) 195, 199
BstBI TTCGAA 1 cut(s) 651
BstC8I GCNNGC 5 cut(s) 61, 89, 408, 511, 585
BstDEI CTNAG 4 cut(s) 1138, 1265, 1332, 1343
BstF5I GGATG 4 cut(s) 882, 1217, 1570, 1756
BstFNI CGCG 1 cut(s) 165
BstH2I RGCGCY 2 cut(s) 746, 849
BstHHI GCGC 4 cut(s) 183, 745, 763, 848
BstMAI GTCTC 5 cut(s) 446, 534, 897, 1266, 1511
BstNI CCWGG 4 cut(s) 244, 250, 1376, 1456
BstSCI CCNGG 8 cut(s) 23, 242, 248, 622, 745, 885, 1374, 1454
BstSFI CTRYAG 3 cut(s) 605, 691, 832
BstSLI GKGCMC 1 cut(s) 869
BstSNI TACGTA 2 cut(s) 195, 199
BstUI CGCG 1 cut(s) 165
BstV1I GCAGC 3 cut(s) 7, 284, 318
BstV2I GAAGAC 2 cut(s) 283, 1367
BstX2I RGATCY 4 cut(s) 303, 434, 678, 1349
BstXI CCANNNNNNTGG 1 cut(s) 213
BstYI RGATCY 4 cut(s) 303, 434, 678, 1349
BsuI GTATCC 2 cut(s) 1410, 1537
BsuRI GGCC 5 cut(s) 56, 260, 363, 389, 616
BtrI CACGTC 1 cut(s) 142
BtsCI GGATG 4 cut(s) 882, 1217, 1570, 1756
BtsIMutI CAGTG 2 cut(s) 1311, 1423
BveI ACCTGC 1 cut(s) 1336
Cac8I GCNNGC 5 cut(s) 61, 89, 408, 511, 585
CaiI CAGNNNCTG 2 cut(s) 51, 249
CfoI GCGC 4 cut(s) 183, 745, 763, 848
Cfr10I RCCGGY 1 cut(s) 509
Cfr13I GGNCC 8 cut(s) 37, 54, 75, 246, 259, 387, 427, 615
CseI GACGC 3 cut(s) 154, 277, 447
CsiI ACCWGGT 2 cut(s) 242, 1374
Csp6I GTAC 4 cut(s) 196, 820, 1135, 1552
CviAII CATG 7 cut(s) 280, 384, 449, 658, 979, 1037, 1792
CviQI GTAC 4 cut(s) 196, 820, 1135, 1552
DdeI CTNAG 4 cut(s) 1138, 1265, 1332, 1343
DinI GGCGCC 1 cut(s) 744
DraI TTTAAA 1 cut(s) 1185
DrdI GACNNNNNNGTC 1 cut(s) 460
DriI GACNNNNNGTC 1 cut(s) 526
DseDI GACNNNNNNGTC 1 cut(s) 460
EaeI YGGCCR 1 cut(s) 361
Eam1104I CTCTTC 3 cut(s) 750, 862, 1324
Eam1105I GACNNNNNGTC 1 cut(s) 526
EarI CTCTTC 3 cut(s) 750, 862, 1324
Ecl136II GAGCTC 2 cut(s) 562, 811
Eco105I TACGTA 2 cut(s) 195, 199
Eco130I CCWWGG 1 cut(s) 1152
Eco24I GRGCYC 2 cut(s) 564, 813
Eco31I GGTCTC 1 cut(s) 897
Eco47I GGWCC 4 cut(s) 37, 75, 246, 427
Eco53kI GAGCTC 2 cut(s) 562, 811
Eco57I CTGAAG 1 cut(s) 1399
Eco88I CYCGRG 2 cut(s) 563, 773
EcoICRI GAGCTC 2 cut(s) 562, 811
EcoO109I RGGNCCY 1 cut(s) 246
EcoRII CCWGG 4 cut(s) 242, 248, 1374, 1454
EcoT14I CCWWGG 1 cut(s) 1152
EcoT38I GRGCYC 2 cut(s) 564, 813
EgeI GGCGCC 1 cut(s) 744
EheI GGCGCC 1 cut(s) 744
ErhI CCWWGG 1 cut(s) 1152
Esp3I CGTCTC 1 cut(s) 446
FaeI CATG 7 cut(s) 283, 387, 452, 661, 982, 1040, 1795
FaqI GGGAC 1 cut(s) 1472
FatI CATG 7 cut(s) 279, 383, 448, 657, 978, 1036, 1791
FauI CCCGC 4 cut(s) 77, 316, 399, 934
FbaI TGATCA 2 cut(s) 1033, 1125
FblI GTMKAC 3 cut(s) 144, 168, 690
Fnu4HI GCNGC 6 cut(s) 21, 57, 298, 329, 332, 792
FokI GGATG 4 cut(s) 869, 1224, 1577, 1763
FriOI GRGCYC 2 cut(s) 564, 813
Fsp4HI GCNGC 6 cut(s) 21, 57, 298, 329, 332, 792
FspAI RTGCGCAY 1 cut(s) 182
FspBI CTAG 3 cut(s) 98, 717, 908
FspI TGCGCA 1 cut(s) 182
GlaI GCGC 4 cut(s) 182, 744, 762, 847
GluI GCNGC 6 cut(s) 21, 57, 298, 329, 332, 792
GsaI CCCAGC 1 cut(s) 497
GsuI CTGGAG 1 cut(s) 211
HaeII RGCGCY 2 cut(s) 746, 849
HaeIII GGCC 5 cut(s) 56, 260, 363, 389, 616
HgaI GACGC 3 cut(s) 154, 277, 447
HhaI GCGC 4 cut(s) 183, 745, 763, 848
Hin1I GRCGYC 4 cut(s) 288, 458, 687, 743
Hin1II CATG 7 cut(s) 283, 387, 452, 661, 982, 1040, 1795
Hin6I GCGC 4 cut(s) 181, 743, 761, 846
HinP1I GCGC 4 cut(s) 181, 743, 761, 846
HincII GTYRAC 1 cut(s) 145
HindII GTYRAC 1 cut(s) 145
HindIII AAGCTT 2 cut(s) 569, 1221
HinfI GANTC 4 cut(s) 101, 796, 1282, 1316
HphI GGTGA 5 cut(s) 1019, 1040, 1317, 1424, 1741
Hpy166II GTNNAC 5 cut(s) 120, 145, 169, 691, 1235
Hpy188I TCNGA 9 cut(s) 576, 726, 786, 862, 1249, 1266, 1298, 1309, 1344
Hpy8I GTNNAC 5 cut(s) 120, 145, 169, 691, 1235
Hpy99I CGWCG 7 cut(s) 134, 146, 463, 466, 689, 1054, 1057
HpyAV CCTTC 6 cut(s) 409, 547, 781, 952, 1063, 1349
HpyCH4III ACNGT 3 cut(s) 41, 1260, 1463
HpyCH4IV ACGT 4 cut(s) 141, 194, 198, 687
HpyCH4V TGCA 8 cut(s) 283, 300, 316, 448, 666, 705, 834, 978
HpyF3I CTNAG 4 cut(s) 1138, 1265, 1332, 1343
HpySE526I ACGT 4 cut(s) 141, 194, 198, 687
Hsp92I GRCGYC 4 cut(s) 288, 458, 687, 743
Hsp92II CATG 7 cut(s) 283, 387, 452, 661, 982, 1040, 1795
HspAI GCGC 4 cut(s) 181, 743, 761, 846
KasI GGCGCC 1 cut(s) 742
Kpn2I TCCGGA 3 cut(s) 532, 1402, 1633
KroI GCCGGC 1 cut(s) 509
KroNI GCCGGC 1 cut(s) 511
Ksp22I TGATCA 2 cut(s) 1033, 1125
LguI GCTCTTC 1 cut(s) 862
LmnI GCTCC 6 cut(s) 541, 559, 808, 877, 1156, 1643
Lsp1109I GCAGC 3 cut(s) 7, 284, 318
LweI GCATC 5 cut(s) 57, 264, 928, 1508, 1609
MabI ACCWGGT 2 cut(s) 242, 1374
MaeI CTAG 3 cut(s) 98, 717, 908
MaeII ACGT 4 cut(s) 141, 194, 198, 687
MaeIII GTNAC 4 cut(s) 41, 1601, 1721, 1729
MflI RGATCY 4 cut(s) 303, 434, 678, 1349
MhlI GDGCHC 4 cut(s) 564, 813, 869, 882
MluCI AATT 4 cut(s) 154, 699, 1660, 1779
Mly113I GGCGCC 1 cut(s) 743
MlyI GAGTC 1 cut(s) 1310
MmeI TCCRAC 2 cut(s) 372, 1555
MroI TCCGGA 3 cut(s) 532, 1402, 1633
MroNI GCCGGC 1 cut(s) 509
MroXI GAANNNNTTC 2 cut(s) 1073, 1303
MseI TTAA 6 cut(s) 1019, 1163, 1184, 1206, 1467, 1718
MslI CAYNNNNRTG 2 cut(s) 211, 1796
MspA1I CMGCKG 2 cut(s) 493, 1131
MspR9I CCNGG 8 cut(s) 25, 244, 250, 624, 747, 887, 1376, 1456
MvaI CCWGG 4 cut(s) 244, 250, 1376, 1456
MvnI CGCG 1 cut(s) 165
NaeI GCCGGC 1 cut(s) 511
NarI GGCGCC 1 cut(s) 743
NciI CCSGG 4 cut(s) 25, 624, 747, 887
NgoMIV GCCGGC 1 cut(s) 509
NlaIII CATG 7 cut(s) 283, 387, 452, 661, 982, 1040, 1795
NlaIV GGNNCC 2 cut(s) 543, 744
NmeAIII GCCGAG 1 cut(s) 399
NmuCI GTSAC 1 cut(s) 1729
NsbI TGCGCA 1 cut(s) 182
NspV TTCGAA 1 cut(s) 651
PaeR7I CTCGAG 1 cut(s) 773
PaqCI CACCTGC 1 cut(s) 1336
PciSI GCTCTTC 1 cut(s) 862
PcsI WCGNNNNNNNCGW 2 cut(s) 138, 470
PdiI GCCGGC 1 cut(s) 511
PdmI GAANNNNTTC 2 cut(s) 1073, 1303
PfeI GAWTC 3 cut(s) 101, 796, 1282
Pfl23II CGTACG 1 cut(s) 195
PflFI GACNNNGTC 2 cut(s) 244, 457
PflMI CCANNNNNTGG 1 cut(s) 249
PfoI TCCNGGA 1 cut(s) 885
PkrI GCNGC 6 cut(s) 22, 58, 299, 330, 333, 793
PleI GAGTC 1 cut(s) 1310
PluTI GGCGCC 1 cut(s) 746
PpsI GAGTC 1 cut(s) 1310
Ppu21I YACGTR 2 cut(s) 195, 199
PpuMI RGGWCCY 1 cut(s) 246
PsiI TTATAA 1 cut(s) 1745
Psp124BI GAGCTC 2 cut(s) 564, 813
Psp5II RGGWCCY 1 cut(s) 246
Psp6I CCWGG 4 cut(s) 242, 248, 1374, 1454
PspFI CCCAGC 1 cut(s) 493
PspGI CCWGG 4 cut(s) 242, 248, 1374, 1454
PspLI CGTACG 1 cut(s) 195
PspN4I GGNNCC 2 cut(s) 543, 744
PspPI GGNCC 8 cut(s) 37, 54, 75, 246, 259, 387, 427, 615
PspPPI RGGWCCY 1 cut(s) 246
PsrI GAACNNNNNNTAC 2 cut(s) 812, 844
PstI CTGCAG 1 cut(s) 836
PstNI CAGNNNCTG 2 cut(s) 51, 249
PsuI RGATCY 4 cut(s) 303, 434, 678, 1349
PsyI GACNNNGTC 2 cut(s) 244, 457
PvuII CAGCTG 2 cut(s) 493, 1131
RsaI GTAC 4 cut(s) 197, 821, 1136, 1553
RsaNI GTAC 4 cut(s) 196, 820, 1135, 1552
RseI CAYNNNNRTG 2 cut(s) 211, 1796
SacI GAGCTC 2 cut(s) 564, 813
SalI GTCGAC 1 cut(s) 143
SapI GCTCTTC 1 cut(s) 862
SaqAI TTAA 6 cut(s) 1019, 1163, 1184, 1206, 1467, 1718
SatI GCNGC 6 cut(s) 21, 57, 298, 329, 332, 792
Sau96I GGNCC 8 cut(s) 37, 54, 75, 246, 259, 387, 427, 615
SchI GAGTC 1 cut(s) 1310
ScrFI CCNGG 8 cut(s) 25, 244, 250, 624, 747, 887, 1376, 1456
SduI GDGCHC 4 cut(s) 564, 813, 869, 882
SexAI ACCWGGT 2 cut(s) 242, 1374
SfaNI GCATC 5 cut(s) 57, 264, 928, 1508, 1609
SfcI CTRYAG 3 cut(s) 605, 691, 832
SfoI GGCGCC 1 cut(s) 744
Sfr274I CTCGAG 1 cut(s) 773
SfuI TTCGAA 1 cut(s) 651
SinI GGWCC 4 cut(s) 37, 75, 246, 427
SlaI CTCGAG 1 cut(s) 773
SmiI ATTTAAAT 1 cut(s) 1185
SmiMI CAYNNNNRTG 2 cut(s) 211, 1796
SmlI CTYRAG 3 cut(s) 263, 773, 824
SmoI CTYRAG 3 cut(s) 263, 773, 824
SnaBI TACGTA 2 cut(s) 195, 199
Sse9I AATT 4 cut(s) 154, 699, 1660, 1779
SspDI GGCGCC 1 cut(s) 742
SspMI CTAG 3 cut(s) 98, 717, 908
SstI GAGCTC 2 cut(s) 564, 813
StyD4I CCNGG 8 cut(s) 23, 242, 248, 622, 745, 885, 1374, 1454
StyI CCWWGG 1 cut(s) 1152
SwaI ATTTAAAT 1 cut(s) 1185
TaaI ACNGT 3 cut(s) 41, 1260, 1463
TaiI ACGT 4 cut(s) 144, 197, 201, 690
TaqI TCGA 5 cut(s) 144, 651, 684, 774, 813
TaqII GACCGA 1 cut(s) 689
TasI AATT 4 cut(s) 154, 699, 1660, 1779
TatI WGTACW 1 cut(s) 1551
TauI GCSGC 3 cut(s) 59, 331, 794
TfiI GAWTC 3 cut(s) 101, 796, 1282
Tru1I TTAA 6 cut(s) 1019, 1163, 1184, 1206, 1467, 1718
Tru9I TTAA 6 cut(s) 1019, 1163, 1184, 1206, 1467, 1718
TscAI CASTG 2 cut(s) 1318, 1423
TseFI GTSAC 1 cut(s) 1729
TseI GCWGC 3 cut(s) 20, 297, 331
Tsp45I GTSAC 1 cut(s) 1729
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 5 cut(s) 371, 537, 1617, 1694, 1748
TspRI CASTG 2 cut(s) 1318, 1423
Tth111I GACNNNGTC 2 cut(s) 244, 457
Van91I CCANNNNNTGG 1 cut(s) 249
VpaK11BI GGWCC 4 cut(s) 37, 75, 246, 427
XapI RAATTY 3 cut(s) 154, 699, 1779
XcmI CCANNNNNNNNNTGG 1 cut(s) 250
XhoI CTCGAG 1 cut(s) 773
XmiI GTMKAC 3 cut(s) 144, 168, 690
XmnI GAANNNNTTC 2 cut(s) 1073, 1303
XspI CTAG 3 cut(s) 98, 717, 908
ZraI GACGTC 1 cut(s) 688
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.