RLG00000009735

ENTH domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0019693
Physical Location & Seq
Reverse (-)
57110659 .. 57111252
594 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009735

Sequence Viewer

Length: 594 bp
ATGTCTAGCTCTGAAAAAAACTATATTGCGTGTAGAGTGTGTGACAGTGTGTTCCTGAGCACCAAAGCCCTCATAAACCACTTAGATACTCACCTGGTGCATGAGGAAGATGCCGCAAGAATCAGGAAACATCTTCAGATTAGTCACCTCATGTCTTTCCAAAGTTCTAATCTATTTTCAAAACCTCTGATCCAACCTGGTCCAGCTACTACTGCTCTTCCTTTCCACCCCTCACCACAAATCCAGCCATATTTCGACCACAGCAGGCAGTTCTACTCACCAGTTCAAGCGCCACCAGTGCCATATTTACAGAGAAACCCATTTGATGTTCCACCAAATTCAAATCCAAATCCAAATCCATACCCTAGTCCACAGACTTATTCTCTACCGGCAAGAGATTTGCACGCCGGATTTGGATCTGGATTTGGGGCACACTCTTTGTTACCTTCCCAGCAAACGTCACAGCTTATGGTGGCAACGGAGGATTCTCGTGATTTAAGGCCGTTTCTGAGTCTCTTGGATTATCCTATTCCGCAAATGAATATCAATTGTAACGGAAACTCAGATGAGTTGGATTTGACCTTGAAACTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
ENTH

Protein Analysis

198

Amino Acids

22.01

Weight (kDa)

6.28

Isoelectric Point (pI)

72.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0019693)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g03860
prunus_persica Prupe.1G040800_v2.0.a1
rosa_laevigata RLG00000009735
rosa_multiflora Rmu_sc0000928.1_g000001
rosa_roxburghii Rroxscaffold_5G00338880
rosa_rugosa Rorug03G0371400
rosa_samantha Rh4DG045800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 114, 533
AclWI GGATC 2 cut(s) 184, 424
AcsI RAATTY 1 cut(s) 337
AcuI CTGAAG 1 cut(s) 119
AdeI CACNNNGTG 1 cut(s) 97
AgsI TTSAA 4 cut(s) 180, 287, 342, 586
AjnI CCWGG 2 cut(s) 93, 196
AluBI AGCT 3 cut(s) 9, 206, 466
AluI AGCT 3 cut(s) 9, 206, 466
Alw21I GWGCWC 1 cut(s) 62
Alw26I GTCTC 1 cut(s) 518
AlwI GGATC 2 cut(s) 184, 424
AoxI GGCC 1 cut(s) 500
ApoI RAATTY 1 cut(s) 337
AspLEI GCGC 1 cut(s) 292
AspS9I GGNCC 1 cut(s) 200
AsuHPI GGTGA 4 cut(s) 83, 137, 225, 270
AvaII GGWCC 1 cut(s) 200
BaeGI GKGCMC 1 cut(s) 433
BauI CACGAG 1 cut(s) 489
Bbv12I GWGCWC 1 cut(s) 62
BceAI ACGGC 1 cut(s) 487
BciT130I CCWGG 2 cut(s) 95, 198
BcoDI GTCTC 1 cut(s) 518
BfaI CTAG 2 cut(s) 6, 366
BfoI RGCGCY 1 cut(s) 293
BisI GCNGC 1 cut(s) 114
BlsI GCNGC 1 cut(s) 115
Bme1390I CCNGG 2 cut(s) 95, 198
Bme18I GGWCC 1 cut(s) 200
BmgT120I GGNCC 1 cut(s) 200
BmrFI CCNGG 2 cut(s) 95, 198
BmsI GCATC 1 cut(s) 100
Bpu10I CCTNAGC 1 cut(s) 56
BsaBI GATNNNNATC 1 cut(s) 415
Bse118I RCCGGY 1 cut(s) 388
Bse1I ACTGG 2 cut(s) 281, 296
Bse8I GATNNNNATC 1 cut(s) 415
BseBI CCWGG 2 cut(s) 95, 198
BseJI GATNNNNATC 1 cut(s) 415
BseMII CTCAG 3 cut(s) 47, 500, 576
BseNI ACTGG 2 cut(s) 281, 296
BseSI GKGCMC 1 cut(s) 433
BseYI CCCAGC 1 cut(s) 450
BshFI GGCC 1 cut(s) 502
BsiHKAI GWGCWC 1 cut(s) 62
BsiSI CCGG 2 cut(s) 389, 408
BsmAI GTCTC 1 cut(s) 518
BsnI GGCC 1 cut(s) 502
Bsp1286I GDGCHC 2 cut(s) 62, 433
Bsp143I GATC 2 cut(s) 189, 416
BspACI CCGC 2 cut(s) 114, 533
BspANI GGCC 1 cut(s) 502
BspCNI CTCAG 3 cut(s) 48, 501, 575
BspPI GGATC 2 cut(s) 184, 424
BspQI GCTCTTC 1 cut(s) 222
BsrFI RCCGGY 1 cut(s) 388
BsrI ACTGG 2 cut(s) 281, 296
BssAI RCCGGY 1 cut(s) 388
BssMI GATC 2 cut(s) 189, 416
BssSI CACGAG 1 cut(s) 489
Bst2BI CACGAG 1 cut(s) 489
Bst2UI CCWGG 2 cut(s) 95, 198
Bst4CI ACNGT 1 cut(s) 47
Bst6I CTCTTC 1 cut(s) 222
BstC8I GCNNGC 2 cut(s) 266, 405
BstDEI CTNAG 4 cut(s) 56, 82, 509, 562
BstH2I RGCGCY 1 cut(s) 293
BstHHI GCGC 1 cut(s) 292
BstKTI GATC 2 cut(s) 192, 419
BstMAI GTCTC 1 cut(s) 518
BstMBI GATC 2 cut(s) 189, 416
BstMWI GCNNNNNNNGC 2 cut(s) 212, 298
BstNI CCWGG 2 cut(s) 95, 198
BstSCI CCNGG 2 cut(s) 93, 196
BstSLI GKGCMC 1 cut(s) 433
BstX2I RGATCY 1 cut(s) 416
BstYI RGATCY 1 cut(s) 416
BsuRI GGCC 1 cut(s) 502
BtsIMutI CAGTG 2 cut(s) 52, 303
Cac8I GCNNGC 2 cut(s) 266, 405
CfoI GCGC 1 cut(s) 292
Cfr10I RCCGGY 1 cut(s) 388
Cfr13I GGNCC 1 cut(s) 200
CsiI ACCWGGT 2 cut(s) 93, 196
CviAII CATG 2 cut(s) 101, 151
CviJI RGCY 6 cut(s) 9, 68, 206, 247, 466, 502
CviKI_1 RGCY 6 cut(s) 9, 68, 206, 247, 466, 502
DdeI CTNAG 4 cut(s) 56, 82, 509, 562
DpnI GATC 2 cut(s) 191, 418
DpnII GATC 2 cut(s) 189, 416
DraIII CACNNNGTG 1 cut(s) 97
Eam1104I CTCTTC 1 cut(s) 222
EarI CTCTTC 1 cut(s) 222
Eco47I GGWCC 1 cut(s) 200
Eco57I CTGAAG 1 cut(s) 119
EcoRII CCWGG 2 cut(s) 93, 196
FaeI CATG 2 cut(s) 104, 154
FaiI YATR 8 cut(s) 24, 74, 102, 152, 250, 304, 361, 470
FatI CATG 2 cut(s) 100, 150
Fnu4HI GCNGC 1 cut(s) 114
Fsp4HI GCNGC 1 cut(s) 114
FspBI CTAG 2 cut(s) 6, 366
GlaI GCGC 1 cut(s) 291
GluI GCNGC 1 cut(s) 114
GsaI CCCAGC 1 cut(s) 454
HaeII RGCGCY 1 cut(s) 293
HaeIII GGCC 1 cut(s) 502
HapII CCGG 2 cut(s) 389, 408
HhaI GCGC 1 cut(s) 292
Hin1II CATG 2 cut(s) 104, 154
Hin6I GCGC 1 cut(s) 290
HinP1I GCGC 1 cut(s) 290
HinfI GANTC 3 cut(s) 120, 485, 511
HpaII CCGG 2 cut(s) 389, 408
HphI GGTGA 4 cut(s) 83, 137, 225, 270
Hpy166II GTNNAC 1 cut(s) 371
Hpy188I TCNGA 5 cut(s) 13, 138, 189, 510, 565
Hpy188III TCNNGA 4 cut(s) 55, 124, 420, 491
Hpy8I GTNNAC 1 cut(s) 371
HpyAV CCTTC 1 cut(s) 456
HpyCH4III ACNGT 1 cut(s) 47
HpyCH4IV ACGT 1 cut(s) 458
HpyCH4V TGCA 2 cut(s) 100, 403
HpyF10VI GCNNNNNNNGC 2 cut(s) 212, 298
HpyF3I CTNAG 4 cut(s) 56, 82, 509, 562
HpySE526I ACGT 1 cut(s) 458
Hsp92II CATG 2 cut(s) 104, 154
HspAI GCGC 1 cut(s) 290
Kzo9I GATC 2 cut(s) 189, 416
LguI GCTCTTC 1 cut(s) 222
LweI GCATC 1 cut(s) 100
MabI ACCWGGT 2 cut(s) 93, 196
MaeI CTAG 2 cut(s) 6, 366
MaeII ACGT 1 cut(s) 458
MaeIII GTNAC 5 cut(s) 41, 143, 441, 459, 551
MalI GATC 2 cut(s) 191, 418
MboI GATC 2 cut(s) 189, 416
MboII GAAGA 3 cut(s) 119, 125, 209
MfeI CAATTG 1 cut(s) 547
MflI RGATCY 1 cut(s) 416
MhlI GDGCHC 2 cut(s) 62, 433
MluCI AATT 2 cut(s) 337, 547
MlyI GAGTC 1 cut(s) 520
MmeI TCCRAC 2 cut(s) 217, 552
MnlI CCTC 6 cut(s) 80, 97, 158, 195, 241, 475
MseI TTAA 1 cut(s) 497
MspI CCGG 2 cut(s) 389, 408
MspR9I CCNGG 2 cut(s) 95, 198
MunI CAATTG 1 cut(s) 547
MvaI CCWGG 2 cut(s) 95, 198
MwoI GCNNNNNNNGC 2 cut(s) 212, 298
NdeII GATC 2 cut(s) 189, 416
NlaIII CATG 2 cut(s) 104, 154
NmuCI GTSAC 3 cut(s) 41, 143, 459
PciSI GCTCTTC 1 cut(s) 222
PfeI GAWTC 2 cut(s) 120, 485
PkrI GCNGC 1 cut(s) 115
PleI GAGTC 1 cut(s) 519
PpsI GAGTC 1 cut(s) 519
Psp6I CCWGG 2 cut(s) 93, 196
PspFI CCCAGC 1 cut(s) 450
PspGI CCWGG 2 cut(s) 93, 196
PspPI GGNCC 1 cut(s) 200
PsuI RGATCY 1 cut(s) 416
SapI GCTCTTC 1 cut(s) 222
SaqAI TTAA 1 cut(s) 497
SatI GCNGC 1 cut(s) 114
Sau3AI GATC 2 cut(s) 189, 416
Sau96I GGNCC 1 cut(s) 200
SchI GAGTC 1 cut(s) 520
ScrFI CCNGG 2 cut(s) 95, 198
SduI GDGCHC 2 cut(s) 62, 433
SexAI ACCWGGT 2 cut(s) 93, 196
SfaNI GCATC 1 cut(s) 100
SinI GGWCC 1 cut(s) 200
Sse9I AATT 2 cut(s) 337, 547
SsiI CCGC 2 cut(s) 114, 533
SspMI CTAG 2 cut(s) 6, 366
StyD4I CCNGG 2 cut(s) 93, 196
TaaI ACNGT 1 cut(s) 47
TaiI ACGT 1 cut(s) 461
TaqI TCGA 1 cut(s) 255
TasI AATT 2 cut(s) 337, 547
TauI GCSGC 1 cut(s) 116
TfiI GAWTC 2 cut(s) 120, 485
Tru1I TTAA 1 cut(s) 497
Tru9I TTAA 1 cut(s) 497
TscAI CASTG 2 cut(s) 52, 303
TseFI GTSAC 3 cut(s) 41, 143, 459
Tsp45I GTSAC 3 cut(s) 41, 143, 459
TspDTI ATGAA 1 cut(s) 554
TspGWI ACGGA 2 cut(s) 494, 570
TspRI CASTG 2 cut(s) 52, 303
VpaK11BI GGWCC 1 cut(s) 200
XapI RAATTY 1 cut(s) 337
XspI CTAG 2 cut(s) 6, 366
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.