Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0004504

Physical Location & Seq

Genomic Coordinates Reverse (-)

5831128 .. 5836731

Gene Structure 5604 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010985

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2436 bp

ATGAATCTTCAAACAGGAGAGACGATGGAGAAGAAAGAGAAGAAGTTCCTTACGGTGGCGCCTTTCGAGTGCGCTTGGCTAAATGATTTGAAGTTCCGGGAAGCTGGGAGGGGCTGCGTGGCTTTTGAAGCCTTTGCTCACAATGATGTGACGCTGGTGTTCCGGGAGAACGTGGGAAGTCAGCACTATCATTACAAGAAAGACAATTGTCCTCACTATACTGTTATTTTGGGTAGTCACAGGAATAGGCGGTTGAAAATTGAGGTGGATGGGAAAACTGTGGTGGATGTGGAGGGTGTTGGTCTTTGTTCTTCTTCTGCATTTCAGAGCTATTGGATCAGTATCTGTGATGGTTTGATCAGTATTGGCAAGGGAAGATACCCTTTTCAGAATCTTGTCTTTCAGTGGCTAGATTCGAATCCGAATTGTAGTGTTCGTTATGTTGGGCTTAGTAGCTGGGATAAACATGTTGGGTATAGGAATGTCAGTGTATTACCTTTAACTCAAAACCATATATCCTTGTGGAAGAATTTGGATTGCAAGGAGTACATGCATGAGGAAGCTGGCGAAGAGGAGTTGGAGGATGAACAAACGGGTTATGAGAAATGGGGGCTTGAAAATTTTCTTGAGAGCTGGGAACTATCTGATGTTCTTTTCGTTGTTGGTCCAGAAGAAAGGCATGTACCAGCTCACAAGCCTATTTTGGCAGCATCTGGGAATTTCCCTATATCATCAGAAGACGTTCTCCAGCTAAAGGGGATAACTTATCCCGTTCTTCATGCTCTACTTGAATATATTTACACAGGTCGAACCCAGATTTCAGAATCGCAGCTTAGTTCCTTGAGATCTCTAGGTTTACAATTCGAAGTGATTTCATTAGTGAAGCAATGCGAGGAGTCCATGGAAAGATTCAAGCTAAATAAAAAGTTGTTTGACTCGGGCAAATGTGTAGAATTATCGTACCCATGCAGTAGGCCACAGTGTTGGACAGCCTTCCCGTTTGGAGTTCCCATCGATGTCCTGAGGCTTAGACAATTGCATTCAACTAACAAGTACAGTGATGTTAACATCTATATTGAAGGTCATGGCCTTATTGCCCAGTCGCATAAAATTATTCTCAGTTTATGGAGTCTCCCATTTGCAAAGATGTTCACAAATGGAATGTGTGAAACAATTTCCTCAGAGGTTCTTTTGAGAGACATATCACCAGAAGTGTTTCAAGCTTTGCTTGAGTTCATGTATAGTGGGGAACTCAATTTAGAAGATACCATGGATTCTGGTGCCTTGTTACTCCAACTTTTTCTGTTGGCTGATCAATTTGGAGTCACTCTCCTTCATCAGGAATGCTGCAAAATGCTTTTAGAATGCCTATCAGAGGACTCGGTCTGTCTGATGCTTCAAGTGATTTCATCAATTCCCTCATGTCAACTCATTGAAGAAACTTGTGAGACGAACTTTTCTATGCACTTTGACTATTGCACAACTGCAAGCATTGACTTCGTTTTGTTAGATGATGCAACCTTTAGAAATATCATTCAGCATCCAGATTTGACTGTAACATCTGAAGAGAAGGTTCTCAATGCAATCTTAATGTGGGGTGCGAAAGCAAAGGAAGTGTGTGGATGGGAGGTGGTGGATGAGATGATGACATATTCAACCGCAGAAGCTCTTTTTGGGGATAGGCTGCAGACAGTAAATGACCTTCTACCACTCGTTCGATTTGTGCTGCTGCCTTTGTCCTTGCTTGAGAAGTTACAGAAGAGCAACATTAGCAGGCATATGTCTATGTTTAATAACCTTGTCAAGGAGGCCATCAATTATATCGAGCATGGATTGACAAGACCGGAAAACGAGCACAACCTGAGAATCCAACATAGGCGATCTAGTTATAAGGAGCTCCAGTACATATGTGATGGGGACAGCAATGGAGTCCTGTACTTTGCAGGTACATCATATGGAGAACATCAGTGGGTTAATCCTGTTCTGGCGAAGAGAATTACAATTACAGCTAGCAGCCCCCCTTCTAGGTTCACTGATCCCAAGGTTTTGGTCTCAAGATCTTACCAGGGAACATCCTTCGCTGGGCCACAGATTGAAGATGGGCGGAATAACACCTGGTGGATGGTTGACATTGGTGCAGATCATCAGCTGATTTGCAACTACTACACCTTGAGACATGATGGCTCCAGAGCATACATGAGATATTGGAATTTCCAGGGATCTCTGGATGGGAAGACGTGGACAAATCTGAGAGTACACGAGAATGACCAAACTATATGCAAGCCGGGGCAGTTCGCATCATGGCCAGTTACAGGACCAAATGCTCTACTTCCGTTCAGATTCTTTAGGGTTGTTCTGACTGGACCTACAATGGATGTTTCAAACCCTTGGAATTTCTGCATTTGCTTTTTAGAACTCTATGGCTACTTCCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0030162 GO:0030163 GO:0031461 GO:0031625 GO:0032991 GO:0043161 GO:0043170 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0050789 GO:0051171 GO:0051246 GO:0051603 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BACK BTB F5_F8_type_C Methyltransf_FA

Protein Analysis

812

Amino Acids

92.7

Weight (kDa)

5.45

Isoelectric Point (pI)

46.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_FA	PF12248	22 - 162	9.6e-30	Farnesoic acid 0-methyl transferase
BTB	PF00651	205 - 302	5.7e-14	BTB/POZ domain
BTB	PF00651	344 - 455	3.7e-18	BTB/POZ domain
BTB_KLHL33	PF21536	383 - 421	7.9e-07	Kelch-like protein 33-like, BTB/POZ domain
BACK	PF07707	463 - 538	2.3e-06	BTB And C-terminal Kelch
F5_F8_type_C	PF00754	668 - 757	5.7e-07	F5/8 type C domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004504)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30600 AT2G30600 AT2G30600 AT2G30600 AT2G30600 AT2G30600
fragaria_vesca	FvH4_2g37320 FvH4_2g37320 FvH4_2g37320 FvH4_2g37320 FvH4_2g37320 FvH4_2g37320
malus_domestica	MD08G1002100.v1.1
prunus_persica	Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1
pyrus_communis	pycom08g00140
rosa_chinensis	RchiOBHm_Chr6g0304381
rosa_laevigata	RLG00000010985
rosa_multiflora	Rmu_ssc0000218.1_g000043
rosa_roxburghii	Rroxscaffold_7G00163790
rosa_rugosa	Rorug06G0330900 Rorug06G0331000
rosa_samantha	Rh6AG443900 Rh6BG458500 Rh6CG456700 Rh6DG443400
rosa_wichuraiana	Rw6G038530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1890
Acc36I	ACCTGC	1 cut(s)	1934
AccB1I	GGYRCC	2 cut(s)	58, 1280
AciI	CCGC	3 cut(s)	250, 1659, 2104
AclWI	GGATC	3 cut(s)	344, 2030, 2227
AcoI	YGGCCR	1 cut(s)	2303
AcsI	RAATTY	5 cut(s)	529, 619, 718, 2209, 2392
AcuI	CTGAAG	1 cut(s)	1584
AcyI	GRCGYC	1 cut(s)	59
AdeI	CACNNNGTG	1 cut(s)	2118
AfaI	GTAC	8 cut(s)	548, 684, 962, 1055, 1904, 1937, 1948, 2256
AfiI	CCNNNNNNNGG	8 cut(s)	55, 754, 1339, 1375, 1804, 2025, 2082, 2312
AflIII	ACRYGT	1 cut(s)	466
AjiI	CACGTC	1 cut(s)	2238
AjnI	CCWGG	3 cut(s)	2064, 2114, 2214
AjuI	GAANNNNNNNTTGG	2 cut(s)	1656, 1688
Alw21I	GWGCWC	2 cut(s)	1857, 1899
Alw26I	GTCTC	6 cut(s)	14, 1136, 1191, 1442, 2056, 2167
AlwI	GGATC	3 cut(s)	344, 2030, 2227
AlwNI	CAGNNNCTG	2 cut(s)	345, 713
Ama87I	CYCGRG	1 cut(s)	937
AoxI	GGCC	5 cut(s)	974, 1087, 1809, 2084, 2303
ApeKI	GCWGC	8 cut(s)	114, 707, 829, 1347, 1684, 1726, 1729, 2013
ApoI	RAATTY	5 cut(s)	529, 619, 718, 2209, 2392
Asp700I	GAANNNNTTC	4 cut(s)	44, 621, 741, 1215
AspLEI	GCGC	2 cut(s)	61, 74
AspS9I	GGNCC	4 cut(s)	665, 2084, 2315, 2363
AsuC2I	CCSGG	3 cut(s)	98, 164, 2286
AsuHPI	GGTGA	1 cut(s)	1197
AsuII	TTCGAA	2 cut(s)	416, 864
AsuNHI	GCTAGC	1 cut(s)	2009
AvaI	CYCGRG	1 cut(s)	937
AvaII	GGWCC	3 cut(s)	665, 2315, 2363
AxyI	CCTNAGG	1 cut(s)	1022
BalI	TGGCCA	1 cut(s)	2305
BanI	GGYRCC	2 cut(s)	58, 1280
BanII	GRGCYC	1 cut(s)	1899
BarI	GAAGNNNNNNTAC	2 cut(s)	1686, 1718
BauI	CACGAG	1 cut(s)	2258
BbsI	GAAGAC	2 cut(s)	744, 2240
Bbv12I	GWGCWC	2 cut(s)	1857, 1899
BbvI	GCAGC	8 cut(s)	101, 719, 841, 1334, 1671, 1713, 1716, 2025
BcgI	CGANNNNNNTGC	2 cut(s)	1480, 1514
BciT130I	CCWGG	3 cut(s)	2066, 2116, 2216
BclI	TGATCA	2 cut(s)	357, 1312
BcnI	CCSGG	3 cut(s)	98, 164, 2286
BcoDI	GTCTC	6 cut(s)	14, 1136, 1191, 1442, 2056, 2167
BfaI	CTAG	5 cut(s)	410, 851, 1884, 2010, 2025
BfmI	CTRYAG	1 cut(s)	1685
BfoI	RGCGCY	1 cut(s)	62
BfuAI	ACCTGC	1 cut(s)	1934
BglII	AGATCT	2 cut(s)	845, 2057
BisI	GCNGC	8 cut(s)	115, 708, 830, 1348, 1685, 1727, 1730, 2014
BlsI	GCNGC	8 cut(s)	116, 709, 831, 1349, 1686, 1728, 1731, 2015
Bme1390I	CCNGG	6 cut(s)	98, 164, 2066, 2116, 2216, 2286
Bme18I	GGWCC	3 cut(s)	665, 2315, 2363
BmeT110I	CYCGRG	1 cut(s)	937
BmgBI	CACGTC	1 cut(s)	2238
BmgT120I	GGNCC	4 cut(s)	665, 2084, 2315, 2363
BmiI	GGNNCC	3 cut(s)	60, 1282, 2185
BmrFI	CCNGG	6 cut(s)	98, 164, 2066, 2116, 2216, 2286
BmrI	ACTGGG	1 cut(s)	1093
BmsI	GCATC	5 cut(s)	719, 1383, 1504, 1549, 2306
BmtI	GCTAGC	1 cut(s)	2013
BmuI	ACTGGG	1 cut(s)	1093
BoxI	GACNNNNGTC	1 cut(s)	207
BpiI	GAAGAC	2 cut(s)	744, 2240
BplI	GAGNNNNNCTC	2 cut(s)	1314, 1346
BpmI	CTGGAG	3 cut(s)	731, 1883, 2170
Bpu14I	TTCGAA	2 cut(s)	416, 864
BpuEI	CTTGAG	6 cut(s)	647, 862, 1250, 1766, 2038, 2191
BpuMI	CCSGG	3 cut(s)	98, 164, 2286
Bsa29I	ATCGAT	1 cut(s)	1014
BsaBI	GATNNNNATC	2 cut(s)	341, 417
BsaHI	GRCGYC	1 cut(s)	59
BsaI	GGTCTC	1 cut(s)	2056
BsaJI	CCNNGG	7 cut(s)	900, 1269, 2040, 2065, 2215, 2285, 2387
BsaWI	WCCGGW	1 cut(s)	1843
BsaXI	ACNNNNNCTCC	2 cut(s)	1886, 1916
Bsc4I	CCNNNNNNNGG	8 cut(s)	55, 754, 1339, 1375, 1804, 2025, 2082, 2312
Bse1I	ACTGG	4 cut(s)	1099, 1900, 2306, 2365
Bse21I	CCTNAGG	1 cut(s)	1022
Bse3DI	GCAATG	2 cut(s)	893, 1930
Bse8I	GATNNNNATC	2 cut(s)	341, 417
BseBI	CCWGG	3 cut(s)	2066, 2116, 2216
BseCI	ATCGAT	1 cut(s)	1014
BseDI	CCNNGG	7 cut(s)	900, 1269, 2040, 2065, 2215, 2285, 2387
BseJI	GATNNNNATC	2 cut(s)	341, 417
BseLI	CCNNNNNNNGG	8 cut(s)	55, 754, 1339, 1375, 1804, 2025, 2082, 2312
BseMI	GCAATG	2 cut(s)	893, 1930
BseMII	CTCAG	5 cut(s)	1013, 1132, 1194, 1853, 2240
BseNI	ACTGG	4 cut(s)	1099, 1900, 2306, 2365
BseRI	GAGGAG	2 cut(s)	587, 908
BseXI	GCAGC	8 cut(s)	101, 719, 841, 1334, 1671, 1713, 1716, 2025
BseYI	CCCAGC	4 cut(s)	104, 456, 633, 2081
BsgI	GTGCAG	1 cut(s)	2157
BshFI	GGCC	5 cut(s)	976, 1089, 1811, 2086, 2305
BshNI	GGYRCC	2 cut(s)	58, 1280
BshVI	ATCGAT	1 cut(s)	1014
BsiHKAI	GWGCWC	2 cut(s)	1857, 1899
BsiHKCI	CYCGRG	1 cut(s)	937
BsiSI	CCGG	4 cut(s)	97, 163, 1844, 2285
BslFI	GGGAC	1 cut(s)	1931
BslI	CCNNNNNNNGG	8 cut(s)	55, 754, 1339, 1375, 1804, 2025, 2082, 2312
BsmAI	GTCTC	6 cut(s)	14, 1136, 1191, 1442, 2056, 2167
BsmBI	CGTCTC	2 cut(s)	14, 1442
BsmFI	GGGAC	1 cut(s)	1931
BsmI	GAATGC	3 cut(s)	1039, 1349, 1370
BsnI	GGCC	5 cut(s)	976, 1089, 1811, 2086, 2305
Bso31I	GGTCTC	1 cut(s)	2056
BsoBI	CYCGRG	1 cut(s)	937
Bsp119I	TTCGAA	2 cut(s)	416, 864
Bsp1286I	GDGCHC	2 cut(s)	1857, 1899
Bsp143I	GATC	9 cut(s)	336, 357, 845, 1312, 1880, 2035, 2057, 2140, 2219
Bsp19I	CCATGG	2 cut(s)	900, 1269
BspACI	CCGC	3 cut(s)	250, 1659, 2104
BspANI	GGCC	5 cut(s)	976, 1089, 1811, 2086, 2305
BspCNI	CTCAG	5 cut(s)	1014, 1131, 1193, 1854, 2241
BspDI	ATCGAT	1 cut(s)	1014
BspLI	GGNNCC	3 cut(s)	60, 1282, 2185
BspMAI	CTGCAG	1 cut(s)	1689
BspMI	ACCTGC	1 cut(s)	1934
BspOI	GCTAGC	1 cut(s)	2013
BspPI	GGATC	3 cut(s)	344, 2030, 2227
BspQI	GCTCTTC	1 cut(s)	1754
BspT104I	TTCGAA	2 cut(s)	416, 864
BspT107I	GGYRCC	2 cut(s)	58, 1280
BspTNI	GGTCTC	1 cut(s)	2056
BsrDI	GCAATG	2 cut(s)	893, 1930
BsrI	ACTGG	4 cut(s)	1099, 1900, 2306, 2365
BssECI	CCNNGG	7 cut(s)	900, 1269, 2040, 2065, 2215, 2285, 2387
BssMI	GATC	9 cut(s)	336, 357, 845, 1312, 1880, 2035, 2057, 2140, 2219
BssNI	GRCGYC	1 cut(s)	59
BssSI	CACGAG	1 cut(s)	2258
BssT1I	CCWWGG	4 cut(s)	900, 1269, 2040, 2387
Bst2BI	CACGAG	1 cut(s)	2258
Bst2UI	CCWGG	3 cut(s)	2066, 2116, 2216
Bst4CI	ACNGT	7 cut(s)	55, 223, 280, 981, 1058, 1555, 1693
Bst6I	CTCTTC	4 cut(s)	564, 1560, 1754, 1985
BstACI	GRCGYC	1 cut(s)	59
BstBI	TTCGAA	2 cut(s)	416, 864
BstC8I	GCNNGC	5 cut(s)	565, 1489, 1775, 2011, 2282
BstDEI	CTNAG	8 cut(s)	449, 833, 1022, 1028, 1118, 1180, 1862, 2249
BstDSI	CCRYGG	2 cut(s)	900, 1269
BstENI	CCTNNNNNAGG	3 cut(s)	1337, 1373, 1802
BstH2I	RGCGCY	1 cut(s)	62
BstHHI	GCGC	2 cut(s)	61, 74
BstKTI	GATC	9 cut(s)	339, 360, 848, 1315, 1883, 2038, 2060, 2143, 2222
BstMAI	GTCTC	6 cut(s)	14, 1136, 1191, 1442, 2056, 2167
BstMBI	GATC	9 cut(s)	336, 357, 845, 1312, 1880, 2035, 2057, 2140, 2219
BstMWI	GCNNNNNNNGC	2 cut(s)	128, 1770
BstNI	CCWGG	3 cut(s)	2066, 2116, 2216
BstNSI	RCATGY	3 cut(s)	470, 553, 683
BstPAI	GACNNNNGTC	1 cut(s)	207
BstSCI	CCNGG	6 cut(s)	96, 162, 2064, 2114, 2214, 2284
BstSFI	CTRYAG	1 cut(s)	1685
BstV1I	GCAGC	8 cut(s)	101, 719, 841, 1334, 1671, 1713, 1716, 2025
BstV2I	GAAGAC	2 cut(s)	744, 2240
BstX2I	RGATCY	3 cut(s)	845, 2057, 2219
BstXI	CCANNNNNNTGG	2 cut(s)	984, 2047
BstYI	RGATCY	3 cut(s)	845, 2057, 2219
Bsu15I	ATCGAT	1 cut(s)	1014
Bsu36I	CCTNAGG	1 cut(s)	1022
BsuRI	GGCC	5 cut(s)	976, 1089, 1811, 2086, 2305
BsuTUI	ATCGAT	1 cut(s)	1014
BtgI	CCRYGG	2 cut(s)	900, 1269
BtrI	CACGTC	1 cut(s)	2238
BtsIMutI	CAGTG	6 cut(s)	410, 493, 986, 1063, 1973, 2031
BveI	ACCTGC	1 cut(s)	1934
Cac8I	GCNNGC	5 cut(s)	565, 1489, 1775, 2011, 2282
CaiI	CAGNNNCTG	2 cut(s)	345, 713
CfoI	GCGC	2 cut(s)	61, 74
Cfr13I	GGNCC	4 cut(s)	665, 2084, 2315, 2363
ClaI	ATCGAT	1 cut(s)	1014
CseI	GACGC	1 cut(s)	160
CsiI	ACCWGGT	1 cut(s)	2114
Csp6I	GTAC	8 cut(s)	547, 683, 961, 1054, 1903, 1936, 1947, 2255
CviQI	GTAC	8 cut(s)	547, 683, 961, 1054, 1903, 1936, 1947, 2255
DdeI	CTNAG	8 cut(s)	449, 833, 1022, 1028, 1118, 1180, 1862, 2249
DinI	GGCGCC	1 cut(s)	60
DpnI	GATC	9 cut(s)	338, 359, 847, 1314, 1882, 2037, 2059, 2142, 2221
DpnII	GATC	9 cut(s)	336, 357, 845, 1312, 1880, 2035, 2057, 2140, 2219
DraIII	CACNNNGTG	1 cut(s)	2118
EaeI	YGGCCR	1 cut(s)	2303
Eam1104I	CTCTTC	4 cut(s)	564, 1560, 1754, 1985
EarI	CTCTTC	4 cut(s)	564, 1560, 1754, 1985
EciI	GGCGGA	1 cut(s)	2119
Ecl136II	GAGCTC	1 cut(s)	1897
Eco130I	CCWWGG	4 cut(s)	900, 1269, 2040, 2387
Eco24I	GRGCYC	1 cut(s)	1899
Eco31I	GGTCTC	1 cut(s)	2056
Eco47I	GGWCC	3 cut(s)	665, 2315, 2363
Eco53kI	GAGCTC	1 cut(s)	1897
Eco57I	CTGAAG	1 cut(s)	1584
Eco81I	CCTNAGG	1 cut(s)	1022
Eco88I	CYCGRG	1 cut(s)	937
EcoICRI	GAGCTC	1 cut(s)	1897
EcoNI	CCTNNNNNAGG	3 cut(s)	1337, 1373, 1802
EcoRII	CCWGG	3 cut(s)	2064, 2114, 2214
EcoT14I	CCWWGG	4 cut(s)	900, 1269, 2040, 2387
EcoT22I	ATGCAT	1 cut(s)	555
EcoT38I	GRGCYC	1 cut(s)	1899
EgeI	GGCGCC	1 cut(s)	60
EheI	GGCGCC	1 cut(s)	60
ErhI	CCWWGG	4 cut(s)	900, 1269, 2040, 2387
Esp3I	CGTCTC	2 cut(s)	14, 1442
FalI	AAGNNNNNCTT	4 cut(s)	367, 399, 1212, 1244
FaqI	GGGAC	1 cut(s)	1931
FauNDI	CATATG	3 cut(s)	1779, 1907, 1954
FbaI	TGATCA	2 cut(s)	357, 1312
Fnu4HI	GCNGC	8 cut(s)	115, 708, 830, 1348, 1685, 1727, 1730, 2014
FriOI	GRGCYC	1 cut(s)	1899
Fsp4HI	GCNGC	8 cut(s)	115, 708, 830, 1348, 1685, 1727, 1730, 2014
FspBI	CTAG	5 cut(s)	410, 851, 1884, 2010, 2025
GlaI	GCGC	2 cut(s)	60, 73
GluI	GCNGC	8 cut(s)	115, 708, 830, 1348, 1685, 1727, 1730, 2014
GsaI	CCCAGC	4 cut(s)	108, 460, 637, 2085
GsuI	CTGGAG	3 cut(s)	731, 1883, 2170
HaeII	RGCGCY	1 cut(s)	62
HaeIII	GGCC	5 cut(s)	976, 1089, 1811, 2086, 2305
HapII	CCGG	4 cut(s)	97, 163, 1844, 2285
HgaI	GACGC	1 cut(s)	160
HhaI	GCGC	2 cut(s)	61, 74
Hin1I	GRCGYC	1 cut(s)	59
Hin6I	GCGC	2 cut(s)	59, 72
HinP1I	GCGC	2 cut(s)	59, 72
HincII	GTYRAC	3 cut(s)	1066, 1427, 2128
HindII	GTYRAC	3 cut(s)	1066, 1427, 2128
HindIII	AAGCTT	1 cut(s)	1221
HpaI	GTTAAC	1 cut(s)	1066
HpaII	CCGG	4 cut(s)	97, 163, 1844, 2285
HphI	GGTGA	1 cut(s)	1197
Hpy166II	GTNNAC	8 cut(s)	857, 1066, 1152, 1427, 2031, 2128, 2241, 2257
Hpy188III	TCNNGA	8 cut(s)	626, 668, 1021, 1340, 1544, 2055, 2187, 2225
Hpy8I	GTNNAC	8 cut(s)	857, 1066, 1152, 1427, 2031, 2128, 2241, 2257
HpyAV	CCTTC	7 cut(s)	1003, 1073, 1343, 1564, 1712, 2031, 2086
HpyCH4III	ACNGT	7 cut(s)	55, 223, 280, 981, 1058, 1555, 1693
HpyCH4IV	ACGT	3 cut(s)	171, 741, 2237
HpyF10VI	GCNNNNNNNGC	2 cut(s)	128, 1770
HpyF3I	CTNAG	8 cut(s)	449, 833, 1022, 1028, 1118, 1180, 1862, 2249
HpySE526I	ACGT	3 cut(s)	171, 741, 2237
Hsp92I	GRCGYC	1 cut(s)	59
HspAI	GCGC	2 cut(s)	59, 72
KasI	GGCGCC	1 cut(s)	58
Ksp22I	TGATCA	2 cut(s)	357, 1312
KspAI	GTTAAC	1 cut(s)	1066
Kzo9I	GATC	9 cut(s)	336, 357, 845, 1312, 1880, 2035, 2057, 2140, 2219
LguI	GCTCTTC	1 cut(s)	1754
LmnI	GCTCC	3 cut(s)	1894, 1902, 2189
Lsp1109I	GCAGC	8 cut(s)	101, 719, 841, 1334, 1671, 1713, 1716, 2025
LweI	GCATC	5 cut(s)	719, 1383, 1504, 1549, 2306
MabI	ACCWGGT	1 cut(s)	2114
MaeI	CTAG	5 cut(s)	410, 851, 1884, 2010, 2025
MaeII	ACGT	3 cut(s)	171, 741, 2237
MaeIII	GTNAC	7 cut(s)	148, 236, 1287, 1324, 1555, 1752, 2308
MalI	GATC	9 cut(s)	338, 359, 847, 1314, 1882, 2037, 2059, 2142, 2221
MboI	GATC	9 cut(s)	336, 357, 845, 1312, 1880, 2035, 2057, 2140, 2219
MfeI	CAATTG	2 cut(s)	205, 1034
MflI	RGATCY	3 cut(s)	845, 2057, 2219
MhlI	GDGCHC	2 cut(s)	1857, 1899
MlsI	TGGCCA	1 cut(s)	2305
MluNI	TGGCCA	1 cut(s)	2305
Mly113I	GGCGCC	1 cut(s)	59
MlyI	GAGTC	6 cut(s)	905, 929, 1138, 1332, 1373, 1938
MmeI	TCCRAC	4 cut(s)	558, 965, 1318, 1894
Mox20I	TGGCCA	1 cut(s)	2305
Mph1103I	ATGCAT	1 cut(s)	555
MroXI	GAANNNNTTC	4 cut(s)	44, 621, 741, 1215
MscI	TGGCCA	1 cut(s)	2305
MseI	TTAA	5 cut(s)	500, 1065, 1589, 1791, 1974
MslI	CAYNNNNRTG	2 cut(s)	144, 2262
Msp20I	TGGCCA	1 cut(s)	2305
MspA1I	CMGCKG	1 cut(s)	2149
MspI	CCGG	4 cut(s)	97, 163, 1844, 2285
MspR9I	CCNGG	6 cut(s)	98, 164, 2066, 2116, 2216, 2286
MunI	CAATTG	2 cut(s)	205, 1034
Mva1269I	GAATGC	3 cut(s)	1039, 1349, 1370
MvaI	CCWGG	3 cut(s)	2066, 2116, 2216
MwoI	GCNNNNNNNGC	2 cut(s)	128, 1770
NarI	GGCGCC	1 cut(s)	59
NciI	CCSGG	3 cut(s)	98, 164, 2286
NcoI	CCATGG	2 cut(s)	900, 1269
NdeI	CATATG	3 cut(s)	1779, 1907, 1954
NdeII	GATC	9 cut(s)	336, 357, 845, 1312, 1880, 2035, 2057, 2140, 2219
NheI	GCTAGC	1 cut(s)	2009
NlaIV	GGNNCC	3 cut(s)	60, 1282, 2185
NmuCI	GTSAC	3 cut(s)	148, 236, 1324
NsiI	ATGCAT	1 cut(s)	555
NspI	RCATGY	3 cut(s)	470, 553, 683
NspV	TTCGAA	2 cut(s)	416, 864
PciI	ACATGT	1 cut(s)	466
PciSI	GCTCTTC	1 cut(s)	1754
PctI	GAATGC	3 cut(s)	1039, 1349, 1370
PdmI	GAANNNNTTC	4 cut(s)	44, 621, 741, 1215
PfeI	GAWTC	9 cut(s)	4, 391, 413, 418, 824, 909, 1274, 1866, 2340
PflFI	GACNNNGTC	1 cut(s)	1382
PfoI	TCCNGGA	2 cut(s)	96, 162
PkrI	GCNGC	8 cut(s)	116, 709, 831, 1349, 1686, 1728, 1731, 2015
PleI	GAGTC	6 cut(s)	904, 929, 1137, 1331, 1373, 1937
PluTI	GGCGCC	1 cut(s)	62
PpsI	GAGTC	6 cut(s)	904, 929, 1137, 1331, 1373, 1937
PscI	ACATGT	1 cut(s)	466
PshAI	GACNNNNGTC	1 cut(s)	207
PsiI	TTATAA	1 cut(s)	1890
Psp124BI	GAGCTC	1 cut(s)	1899
Psp6I	CCWGG	3 cut(s)	2064, 2114, 2214
PspFI	CCCAGC	4 cut(s)	104, 456, 633, 2081
PspGI	CCWGG	3 cut(s)	2064, 2114, 2214
PspN4I	GGNNCC	3 cut(s)	60, 1282, 2185
PspPI	GGNCC	4 cut(s)	665, 2084, 2315, 2363
PstI	CTGCAG	1 cut(s)	1689
PstNI	CAGNNNCTG	2 cut(s)	345, 713
PsuI	RGATCY	3 cut(s)	845, 2057, 2219
PsyI	GACNNNGTC	1 cut(s)	1382
PvuII	CAGCTG	1 cut(s)	2149
RsaI	GTAC	8 cut(s)	548, 684, 962, 1055, 1904, 1937, 1948, 2256
RsaNI	GTAC	8 cut(s)	547, 683, 961, 1054, 1903, 1936, 1947, 2255
RseI	CAYNNNNRTG	2 cut(s)	144, 2262
SacI	GAGCTC	1 cut(s)	1899
SapI	GCTCTTC	1 cut(s)	1754
SaqAI	TTAA	5 cut(s)	500, 1065, 1589, 1791, 1974
SatI	GCNGC	8 cut(s)	115, 708, 830, 1348, 1685, 1727, 1730, 2014
Sau3AI	GATC	9 cut(s)	336, 357, 845, 1312, 1880, 2035, 2057, 2140, 2219
Sau96I	GGNCC	4 cut(s)	665, 2084, 2315, 2363
SchI	GAGTC	6 cut(s)	905, 929, 1138, 1332, 1373, 1938
ScrFI	CCNGG	6 cut(s)	98, 164, 2066, 2116, 2216, 2286
SduI	GDGCHC	2 cut(s)	1857, 1899
SexAI	ACCWGGT	1 cut(s)	2114
SfaNI	GCATC	5 cut(s)	719, 1383, 1504, 1549, 2306
SfcI	CTRYAG	1 cut(s)	1685
SfoI	GGCGCC	1 cut(s)	60
SfuI	TTCGAA	2 cut(s)	416, 864
SinI	GGWCC	3 cut(s)	665, 2315, 2363
SmiMI	CAYNNNNRTG	2 cut(s)	144, 2262
SmlI	CTYRAG	6 cut(s)	626, 841, 1229, 1745, 2053, 2170
SmoI	CTYRAG	6 cut(s)	626, 841, 1229, 1745, 2053, 2170
SsiI	CCGC	3 cut(s)	250, 1659, 2104
SspDI	GGCGCC	1 cut(s)	58
SspMI	CTAG	5 cut(s)	410, 851, 1884, 2010, 2025
SstI	GAGCTC	1 cut(s)	1899
StyD4I	CCNGG	6 cut(s)	96, 162, 2064, 2114, 2214, 2284
StyI	CCWWGG	4 cut(s)	900, 1269, 2040, 2387
TaaI	ACNGT	7 cut(s)	55, 223, 280, 981, 1058, 1555, 1693
TaiI	ACGT	3 cut(s)	174, 744, 2240
TaqI	TCGA	7 cut(s)	66, 416, 808, 864, 1014, 1717, 1824
TaqII	GACCGA	1 cut(s)	1372
TatI	WGTACW	5 cut(s)	546, 1053, 1902, 1935, 2254
TfiI	GAWTC	9 cut(s)	4, 391, 413, 418, 824, 909, 1274, 1866, 2340
Tru1I	TTAA	5 cut(s)	500, 1065, 1589, 1791, 1974
Tru9I	TTAA	5 cut(s)	500, 1065, 1589, 1791, 1974
TscAI	CASTG	6 cut(s)	410, 493, 986, 1063, 1973, 2038
TseFI	GTSAC	3 cut(s)	148, 236, 1324
TseI	GCWGC	8 cut(s)	114, 707, 829, 1347, 1684, 1726, 1729, 2013
Tsp45I	GTSAC	3 cut(s)	148, 236, 1324
TspDTI	ATGAA	7 cut(s)	17, 600, 767, 864, 1225, 1325, 1398
TspGWI	ACGGA	1 cut(s)	2322
TspRI	CASTG	6 cut(s)	410, 493, 986, 1063, 1973, 2038
Tth111I	GACNNNGTC	1 cut(s)	1382
VpaK11BI	GGWCC	3 cut(s)	665, 2315, 2363
XagI	CCTNNNNNAGG	3 cut(s)	1337, 1373, 1802
XapI	RAATTY	5 cut(s)	529, 619, 718, 2209, 2392
XceI	RCATGY	3 cut(s)	470, 553, 683
XmnI	GAANNNNTTC	4 cut(s)	44, 621, 741, 1215
XspI	CTAG	5 cut(s)	410, 851, 1884, 2010, 2025
Zsp2I	ATGCAT	1 cut(s)	555

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.