Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0004504

Physical Location & Seq

Genomic Coordinates Reverse (-)

5970167 .. 5975944

Gene Structure 5778 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00163790.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGGAGAAGAAAGAGAAGAAGTTCCTTACGGTGGCGCCTTTCGAGTGCGCTTGGCGAAATGATTTGAAGTTCCGGGAAGCTGGGAGGGGCTGCGTGGCTTTTGAAGCGTTTGCTCACAATGATGTGACGCTGGTGTTCCGGGAGAACGTGGGAAGTCAGCACTATCATTACAAGAAAGATAATTGTCCTCACTATACTGTTATTTTGGGTAGTCATAGGAATAGGCGGTTGAAAATTGAGGTGGATGGGAAAACTGTGGTGGATGTGGAGGGTGTTGGTCTTTGTTCTTCTTCTGCATTTCAGAGCTATTGGATCAGCATCTGTGATGGTTTGATCAGTATTGGCAAGGGAAGATACCCTTTTCAGAATCTTGTCTTTCAGTGGCTAGATTCGAATCCAAATTGTAGTGTTCGTTATGTTGGGCTTAGTAGTTGGGATAAACATGTTGGGTATAGGAATGTCAGTGTTTTACCTTTAACTCAAAACCATATATCCTTGTGGAAGAATTTGGATTGCAAGGAGTACATGCATGAGGAAGCTGGCGAAGAGGAGTTGGAGGATGAACGAACCGGTTATGAGAAATGGGGGCTTGAAAATTTTCTTGAGAGCTGGGAACTATCTGATGTTCTTTTCGTTGTTGGTCCAGAAGAAAGGCATGTACCAGCTCACAAGCCTATTTTGGCAGCATCTGGAAATTTCCCTATATCATCAGAAGACGTTCTCCAGCTAAAGGGGATAACTTATCCCGTTCTCCATGCTCTACTTGAATATATTTACACAGGTCGAACCCAGATTTCAGAATCGCAGCTTAGTTCCTTGAGAGCTCTAGGTTTACAATTCGAAGTGATTTCATTAGTGAAGCAATGCGAGGAGTCCATGGAAAGATTCAAGCTAAATAAAAAGCTGTTTGACTCGGGCAAATGTGTAGAATTGTCATACCCATGCAGTAGGCCACAGTGTTGGACAGCCTTCCCGTTTGGAGTTCCCATCGATGTCCTGAGGCTTAGGCAATTGCATTCAACTAACAAGTACAGTGATGTTAACATCTATATTGAAGGTCATGGCCTTATTGCCCAGTCGCATAAAATTATTCTCAGTTTATGGAGTCTCCCATTTGCAAAGATGTTCACAAATGGAATGTGTGAAACAATTTCCTCAGAGGTTCTTTTGAGAGACATATCACCAGAAGCGTTTCAAGCTTTGCTTGAGTTCATGTATAGTGGGGAACTCAATTTAGAAGCCACCATGGATTCTGGTGCCTTGTTACTCCAACTTTTTCTGTTGGCTGATCAATTTGGAGTCACTCTGCTTCATCAGGAATGCTGCAAAATGCTTTTAGAATGCGTATCAGAGGACTCGGTCTGTCTGATGCTTCAAGTGATTTCATCAATTCCCTCATGTCAACTTATTGAAGAAACTTGTGAGACGAACTTTTCTATGCACTTTGACTATTGCACAACTGCAAGCATTGACTTCGTTTTGTTAGATGATGCAACCTTTACAAATATCATTCAGCATCCAGATTTGAATGTAACATCTGAAGAGAAGGTTCTCAATGCAATCTTAATGTGGGGTGTGAAAGCAAAGGAAGTGTGTGGATGGGAGGTGGTGGATGAGATGATGACATATTCAACCGCAGAAGCTCTTTTGGCGATAGGCTGCAGACATTACAGCAGAGCAACATTAGCAGGCATATTTCTATGTCAAGGAGGCCATCAATTATATCAAGCATGGATTGACAAGACCGGAAAACGAGAACAAGTAGAGGTAGAAGACTTAGGTGGAATCAATAGCCTGAGAATCCAACATAGGCAATCTAGTTATAAGGAGCTCCAGTACATATGTGATGGGGACAGCAATGGAGTCCTGTACTTTGCAGGTACATCATATGGAGAACATCAGTGGGTTAATCCTGTTCTGGCGAAGAGAATTACAATTACAGCTAGCAGTCCCCCTTCTAGGTTCACTGATCCCAAGGTTTTGGTCTCAAGATCTTACCAGGGAACATCCTTCACTGGGCCACAGATTGAAGATGGGCGGAATAACACCTGGTGGATGGTCGACATTGGTGCAGATCATCAGCTGATTTGCAACTACTACACCTTGAGACATGATGGCTCCAGAGCATACATGAGATATTGGAATTTCCTGGGATCTCTGGATGGGAAGACGTGGACAAATCTGAGAGTACACGAGAATGACCAAACTATATGCAAGCCGGGGCAGTTCGCATCATGGCCAGTTACAGGACCAAATGCTCTACTTCCGTTCAGATTCTTTAGGGTTGTTCTGACTGGACCTACAATGGATGCTTCAAACCCTTGGAATTTCTGCATTTGCTTTTTAGAACTCTATGGCTACTTCCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0030162 GO:0030163 GO:0031461 GO:0031625 GO:0032991 GO:0043161 GO:0043170 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0050789 GO:0051171 GO:0051246 GO:0051603 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BACK BTB F5_F8_type_C Methyltransf_FA

Protein Analysis

789

Amino Acids

89.79

Weight (kDa)

5.49

Isoelectric Point (pI)

43.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_FA	PF12248	14 - 154	3.4e-30	Farnesoic acid 0-methyl transferase
BTB	PF00651	197 - 294	4.7e-14	BTB/POZ domain
BTB	PF00651	336 - 446	5.7e-18	BTB/POZ domain
BTB_KLHL33	PF21536	375 - 413	1.4e-06	Kelch-like protein 33-like, BTB/POZ domain
BACK	PF07707	455 - 527	6.8e-07	BTB And C-terminal Kelch
F5_F8_type_C	PF00754	646 - 735	2.6e-06	F5/8 type C domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004504)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30600 AT2G30600 AT2G30600 AT2G30600 AT2G30600 AT2G30600
fragaria_vesca	FvH4_2g37320 FvH4_2g37320 FvH4_2g37320 FvH4_2g37320 FvH4_2g37320 FvH4_2g37320
malus_domestica	MD08G1002100.v1.1
prunus_persica	Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1
pyrus_communis	pycom08g00140
rosa_chinensis	RchiOBHm_Chr6g0304381
rosa_laevigata	RLG00000010985
rosa_multiflora	Rmu_ssc0000218.1_g000043
rosa_roxburghii	Rroxscaffold_7G00163790
rosa_rugosa	Rorug06G0330900 Rorug06G0331000
rosa_samantha	Rh6AG443900 Rh6BG458500 Rh6CG456700 Rh6DG443400
rosa_wichuraiana	Rw6G038530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1824
Acc36I	ACCTGC	1 cut(s)	1868
AccB1I	GGYRCC	2 cut(s)	34, 1256
AccI	GTMKAC	1 cut(s)	2061
AciI	CCGC	3 cut(s)	226, 1635, 2038
AclWI	GGATC	3 cut(s)	320, 1964, 2161
AcoI	YGGCCR	1 cut(s)	2237
AcsI	RAATTY	5 cut(s)	505, 595, 694, 2143, 2326
AcuI	CTGAAG	1 cut(s)	1560
AcyI	GRCGYC	1 cut(s)	35
AdeI	CACNNNGTG	1 cut(s)	2052
AfaI	GTAC	7 cut(s)	524, 660, 1031, 1838, 1871, 1882, 2190
AfiI	CCNNNNNNNGG	5 cut(s)	31, 730, 1959, 2016, 2246
AflIII	ACRYGT	1 cut(s)	442
AgeI	ACCGGT	1 cut(s)	569
AjiI	CACGTC	1 cut(s)	2172
AjnI	CCWGG	3 cut(s)	1998, 2048, 2148
Alw21I	GWGCWC	2 cut(s)	826, 1833
Alw26I	GTCTC	5 cut(s)	1112, 1167, 1418, 1990, 2101
AlwI	GGATC	3 cut(s)	320, 1964, 2161
AlwNI	CAGNNNCTG	2 cut(s)	321, 689
Ama87I	CYCGRG	1 cut(s)	913
AoxI	GGCC	5 cut(s)	950, 1063, 1711, 2018, 2237
ApeKI	GCWGC	5 cut(s)	90, 683, 805, 1323, 1659
ApoI	RAATTY	5 cut(s)	505, 595, 694, 2143, 2326
AsiGI	ACCGGT	1 cut(s)	569
Asp700I	GAANNNNTTC	4 cut(s)	20, 597, 717, 1191
AspLEI	GCGC	2 cut(s)	37, 50
AspS9I	GGNCC	4 cut(s)	641, 2018, 2249, 2297
AsuC2I	CCSGG	3 cut(s)	74, 140, 2220
AsuHPI	GGTGA	1 cut(s)	1173
AsuII	TTCGAA	2 cut(s)	392, 840
AsuNHI	GCTAGC	1 cut(s)	1943
AvaI	CYCGRG	1 cut(s)	913
AvaII	GGWCC	3 cut(s)	641, 2249, 2297
AxyI	CCTNAGG	1 cut(s)	998
BalI	TGGCCA	1 cut(s)	2239
BanI	GGYRCC	2 cut(s)	34, 1256
BanII	GRGCYC	2 cut(s)	826, 1833
BauI	CACGAG	1 cut(s)	2192
BbsI	GAAGAC	3 cut(s)	720, 1779, 2174
Bbv12I	GWGCWC	2 cut(s)	826, 1833
BbvI	GCAGC	5 cut(s)	77, 695, 817, 1310, 1646
BcgI	CGANNNNNNTGC	4 cut(s)	1456, 1490, 2051, 2085
BciT130I	CCWGG	3 cut(s)	2000, 2050, 2150
BclI	TGATCA	2 cut(s)	333, 1288
BcnI	CCSGG	3 cut(s)	74, 140, 2220
BcoDI	GTCTC	5 cut(s)	1112, 1167, 1418, 1990, 2101
BfaI	CTAG	5 cut(s)	386, 827, 1818, 1944, 1959
BfmI	CTRYAG	1 cut(s)	1660
BfoI	RGCGCY	1 cut(s)	38
BfuAI	ACCTGC	1 cut(s)	1868
BglII	AGATCT	1 cut(s)	1991
BisI	GCNGC	5 cut(s)	91, 684, 806, 1324, 1660
BlsI	GCNGC	5 cut(s)	92, 685, 807, 1325, 1661
Bme1390I	CCNGG	6 cut(s)	74, 140, 2000, 2050, 2150, 2220
Bme18I	GGWCC	3 cut(s)	641, 2249, 2297
BmeT110I	CYCGRG	1 cut(s)	913
BmgBI	CACGTC	1 cut(s)	2172
BmgT120I	GGNCC	4 cut(s)	641, 2018, 2249, 2297
BmiI	GGNNCC	3 cut(s)	36, 1258, 2119
BmrFI	CCNGG	6 cut(s)	74, 140, 2000, 2050, 2150, 2220
BmrI	ACTGGG	2 cut(s)	1069, 2025
BmsI	GCATC	7 cut(s)	327, 695, 1359, 1480, 1525, 2240, 2299
BmtI	GCTAGC	1 cut(s)	1947
BmuI	ACTGGG	2 cut(s)	1069, 2025
BpiI	GAAGAC	3 cut(s)	720, 1779, 2174
BpmI	CTGGAG	3 cut(s)	707, 1817, 2104
Bpu10I	CCTNAGC	1 cut(s)	1004
Bpu14I	TTCGAA	2 cut(s)	392, 840
BpuEI	CTTGAG	5 cut(s)	623, 838, 1226, 1972, 2125
BpuMI	CCSGG	3 cut(s)	74, 140, 2220
Bsa29I	ATCGAT	1 cut(s)	990
BsaBI	GATNNNNATC	2 cut(s)	317, 393
BsaHI	GRCGYC	1 cut(s)	35
BsaI	GGTCTC	1 cut(s)	1990
BsaJI	CCNNGG	7 cut(s)	876, 1245, 1974, 1999, 2149, 2219, 2321
BsaWI	WCCGGW	2 cut(s)	569, 1745
BsaXI	ACNNNNNCTCC	2 cut(s)	1820, 1850
Bsc4I	CCNNNNNNNGG	5 cut(s)	31, 730, 1959, 2016, 2246
Bse118I	RCCGGY	1 cut(s)	569
Bse1I	ACTGG	5 cut(s)	1075, 1834, 2020, 2240, 2299
Bse21I	CCTNAGG	1 cut(s)	998
Bse3DI	GCAATG	2 cut(s)	869, 1864
Bse8I	GATNNNNATC	2 cut(s)	317, 393
BseBI	CCWGG	3 cut(s)	2000, 2050, 2150
BseCI	ATCGAT	1 cut(s)	990
BseDI	CCNNGG	7 cut(s)	876, 1245, 1974, 1999, 2149, 2219, 2321
BseJI	GATNNNNATC	2 cut(s)	317, 393
BseLI	CCNNNNNNNGG	5 cut(s)	31, 730, 1959, 2016, 2246
BseMI	GCAATG	2 cut(s)	869, 1864
BseMII	CTCAG	5 cut(s)	989, 1108, 1170, 1787, 2174
BseNI	ACTGG	5 cut(s)	1075, 1834, 2020, 2240, 2299
BseRI	GAGGAG	2 cut(s)	563, 884
BseXI	GCAGC	5 cut(s)	77, 695, 817, 1310, 1646
BseYI	CCCAGC	2 cut(s)	80, 609
BsgI	GTGCAG	1 cut(s)	2091
BshFI	GGCC	5 cut(s)	952, 1065, 1713, 2020, 2239
BshNI	GGYRCC	2 cut(s)	34, 1256
BshTI	ACCGGT	1 cut(s)	569
BshVI	ATCGAT	1 cut(s)	990
BsiHKAI	GWGCWC	2 cut(s)	826, 1833
BsiHKCI	CYCGRG	1 cut(s)	913
BsiSI	CCGG	5 cut(s)	73, 139, 570, 1746, 2219
BslFI	GGGAC	2 cut(s)	1865, 1935
BslI	CCNNNNNNNGG	5 cut(s)	31, 730, 1959, 2016, 2246
BsmAI	GTCTC	5 cut(s)	1112, 1167, 1418, 1990, 2101
BsmBI	CGTCTC	1 cut(s)	1418
BsmFI	GGGAC	2 cut(s)	1865, 1935
BsmI	GAATGC	3 cut(s)	1015, 1325, 1346
BsnI	GGCC	5 cut(s)	952, 1065, 1713, 2020, 2239
Bso31I	GGTCTC	1 cut(s)	1990
BsoBI	CYCGRG	1 cut(s)	913
Bsp119I	TTCGAA	2 cut(s)	392, 840
Bsp1286I	GDGCHC	2 cut(s)	826, 1833
Bsp143I	GATC	7 cut(s)	312, 333, 1288, 1969, 1991, 2074, 2153
Bsp19I	CCATGG	2 cut(s)	876, 1245
BspACI	CCGC	3 cut(s)	226, 1635, 2038
BspANI	GGCC	5 cut(s)	952, 1065, 1713, 2020, 2239
BspCNI	CTCAG	5 cut(s)	990, 1107, 1169, 1788, 2175
BspDI	ATCGAT	1 cut(s)	990
BspLI	GGNNCC	3 cut(s)	36, 1258, 2119
BspMAI	CTGCAG	1 cut(s)	1664
BspMI	ACCTGC	1 cut(s)	1868
BspOI	GCTAGC	1 cut(s)	1947
BspPI	GGATC	3 cut(s)	320, 1964, 2161
BspT104I	TTCGAA	2 cut(s)	392, 840
BspT107I	GGYRCC	2 cut(s)	34, 1256
BspTNI	GGTCTC	1 cut(s)	1990
BsrDI	GCAATG	2 cut(s)	869, 1864
BsrFI	RCCGGY	1 cut(s)	569
BsrI	ACTGG	5 cut(s)	1075, 1834, 2020, 2240, 2299
BssAI	RCCGGY	1 cut(s)	569
BssECI	CCNNGG	7 cut(s)	876, 1245, 1974, 1999, 2149, 2219, 2321
BssMI	GATC	7 cut(s)	312, 333, 1288, 1969, 1991, 2074, 2153
BssNI	GRCGYC	1 cut(s)	35
BssSI	CACGAG	1 cut(s)	2192
BssT1I	CCWWGG	4 cut(s)	876, 1245, 1974, 2321
Bst2BI	CACGAG	1 cut(s)	2192
Bst2UI	CCWGG	3 cut(s)	2000, 2050, 2150
Bst4CI	ACNGT	5 cut(s)	31, 199, 256, 957, 1034
Bst6I	CTCTTC	3 cut(s)	540, 1536, 1919
BstACI	GRCGYC	1 cut(s)	35
BstBI	TTCGAA	2 cut(s)	392, 840
BstC8I	GCNNGC	5 cut(s)	541, 1465, 1690, 1945, 2216
BstDEI	CTNAG	9 cut(s)	425, 809, 998, 1004, 1094, 1156, 1777, 1796, 2183
BstDSI	CCRYGG	2 cut(s)	876, 1245
BstH2I	RGCGCY	1 cut(s)	38
BstHHI	GCGC	2 cut(s)	37, 50
BstKTI	GATC	7 cut(s)	315, 336, 1291, 1972, 1994, 2077, 2156
BstMAI	GTCTC	5 cut(s)	1112, 1167, 1418, 1990, 2101
BstMBI	GATC	7 cut(s)	312, 333, 1288, 1969, 1991, 2074, 2153
BstMWI	GCNNNNNNNGC	4 cut(s)	104, 1196, 1649, 1685
BstNI	CCWGG	3 cut(s)	2000, 2050, 2150
BstNSI	RCATGY	3 cut(s)	446, 529, 659
BstSCI	CCNGG	6 cut(s)	72, 138, 1998, 2048, 2148, 2218
BstSFI	CTRYAG	1 cut(s)	1660
BstV1I	GCAGC	5 cut(s)	77, 695, 817, 1310, 1646
BstV2I	GAAGAC	3 cut(s)	720, 1779, 2174
BstX2I	RGATCY	2 cut(s)	1991, 2153
BstXI	CCANNNNNNTGG	2 cut(s)	960, 1981
BstYI	RGATCY	2 cut(s)	1991, 2153
Bsu15I	ATCGAT	1 cut(s)	990
Bsu36I	CCTNAGG	1 cut(s)	998
BsuRI	GGCC	5 cut(s)	952, 1065, 1713, 2020, 2239
BsuTUI	ATCGAT	1 cut(s)	990
BtgI	CCRYGG	2 cut(s)	876, 1245
BtrI	CACGTC	1 cut(s)	2172
BtsIMutI	CAGTG	7 cut(s)	386, 469, 962, 1039, 1907, 1965, 2013
BveI	ACCTGC	1 cut(s)	1868
Cac8I	GCNNGC	5 cut(s)	541, 1465, 1690, 1945, 2216
CaiI	CAGNNNCTG	2 cut(s)	321, 689
CfoI	GCGC	2 cut(s)	37, 50
Cfr10I	RCCGGY	1 cut(s)	569
Cfr13I	GGNCC	4 cut(s)	641, 2018, 2249, 2297
ClaI	ATCGAT	1 cut(s)	990
CseI	GACGC	1 cut(s)	136
CsiI	ACCWGGT	1 cut(s)	2048
Csp6I	GTAC	7 cut(s)	523, 659, 1030, 1837, 1870, 1881, 2189
CspAI	ACCGGT	1 cut(s)	569
CviQI	GTAC	7 cut(s)	523, 659, 1030, 1837, 1870, 1881, 2189
DdeI	CTNAG	9 cut(s)	425, 809, 998, 1004, 1094, 1156, 1777, 1796, 2183
DinI	GGCGCC	1 cut(s)	36
DpnI	GATC	7 cut(s)	314, 335, 1290, 1971, 1993, 2076, 2155
DpnII	GATC	7 cut(s)	312, 333, 1288, 1969, 1991, 2074, 2153
DraIII	CACNNNGTG	1 cut(s)	2052
EaeI	YGGCCR	1 cut(s)	2237
Eam1104I	CTCTTC	3 cut(s)	540, 1536, 1919
EarI	CTCTTC	3 cut(s)	540, 1536, 1919
EciI	GGCGGA	1 cut(s)	2053
Ecl136II	GAGCTC	2 cut(s)	824, 1831
Eco130I	CCWWGG	4 cut(s)	876, 1245, 1974, 2321
Eco24I	GRGCYC	2 cut(s)	826, 1833
Eco31I	GGTCTC	1 cut(s)	1990
Eco47I	GGWCC	3 cut(s)	641, 2249, 2297
Eco53kI	GAGCTC	2 cut(s)	824, 1831
Eco57I	CTGAAG	1 cut(s)	1560
Eco81I	CCTNAGG	1 cut(s)	998
Eco88I	CYCGRG	1 cut(s)	913
EcoICRI	GAGCTC	2 cut(s)	824, 1831
EcoRII	CCWGG	3 cut(s)	1998, 2048, 2148
EcoT14I	CCWWGG	4 cut(s)	876, 1245, 1974, 2321
EcoT22I	ATGCAT	1 cut(s)	531
EcoT38I	GRGCYC	2 cut(s)	826, 1833
EgeI	GGCGCC	1 cut(s)	36
EheI	GGCGCC	1 cut(s)	36
ErhI	CCWWGG	4 cut(s)	876, 1245, 1974, 2321
Esp3I	CGTCTC	1 cut(s)	1418
FalI	AAGNNNNNCTT	4 cut(s)	343, 375, 1188, 1220
FaqI	GGGAC	2 cut(s)	1865, 1935
FauNDI	CATATG	2 cut(s)	1841, 1888
FbaI	TGATCA	2 cut(s)	333, 1288
FblI	GTMKAC	1 cut(s)	2061
Fnu4HI	GCNGC	5 cut(s)	91, 684, 806, 1324, 1660
FriOI	GRGCYC	2 cut(s)	826, 1833
Fsp4HI	GCNGC	5 cut(s)	91, 684, 806, 1324, 1660
FspBI	CTAG	5 cut(s)	386, 827, 1818, 1944, 1959
GlaI	GCGC	2 cut(s)	36, 49
GluI	GCNGC	5 cut(s)	91, 684, 806, 1324, 1660
GsaI	CCCAGC	2 cut(s)	84, 613
GsuI	CTGGAG	3 cut(s)	707, 1817, 2104
HaeII	RGCGCY	1 cut(s)	38
HaeIII	GGCC	5 cut(s)	952, 1065, 1713, 2020, 2239
HapII	CCGG	5 cut(s)	73, 139, 570, 1746, 2219
HgaI	GACGC	1 cut(s)	136
HhaI	GCGC	2 cut(s)	37, 50
Hin1I	GRCGYC	1 cut(s)	35
Hin6I	GCGC	2 cut(s)	35, 48
HinP1I	GCGC	2 cut(s)	35, 48
HincII	GTYRAC	3 cut(s)	1042, 1403, 2062
HindII	GTYRAC	3 cut(s)	1042, 1403, 2062
HindIII	AAGCTT	1 cut(s)	1197
HpaI	GTTAAC	1 cut(s)	1042
HpaII	CCGG	5 cut(s)	73, 139, 570, 1746, 2219
HphI	GGTGA	1 cut(s)	1173
Hpy166II	GTNNAC	8 cut(s)	833, 1042, 1128, 1403, 1965, 2062, 2175, 2191
Hpy188III	TCNNGA	9 cut(s)	602, 644, 690, 997, 1316, 1520, 1989, 2121, 2159
Hpy8I	GTNNAC	8 cut(s)	833, 1042, 1128, 1403, 1965, 2062, 2175, 2191
HpyAV	CCTTC	5 cut(s)	979, 1049, 1540, 1965, 2020
HpyCH4III	ACNGT	5 cut(s)	31, 199, 256, 957, 1034
HpyCH4IV	ACGT	3 cut(s)	147, 717, 2171
HpyF10VI	GCNNNNNNNGC	4 cut(s)	104, 1196, 1649, 1685
HpyF3I	CTNAG	9 cut(s)	425, 809, 998, 1004, 1094, 1156, 1777, 1796, 2183
HpySE526I	ACGT	3 cut(s)	147, 717, 2171
Hsp92I	GRCGYC	1 cut(s)	35
HspAI	GCGC	2 cut(s)	35, 48
KasI	GGCGCC	1 cut(s)	34
Ksp22I	TGATCA	2 cut(s)	333, 1288
KspAI	GTTAAC	1 cut(s)	1042
Kzo9I	GATC	7 cut(s)	312, 333, 1288, 1969, 1991, 2074, 2153
LmnI	GCTCC	3 cut(s)	1828, 1836, 2123
Lsp1109I	GCAGC	5 cut(s)	77, 695, 817, 1310, 1646
LweI	GCATC	7 cut(s)	327, 695, 1359, 1480, 1525, 2240, 2299
MabI	ACCWGGT	1 cut(s)	2048
MaeI	CTAG	5 cut(s)	386, 827, 1818, 1944, 1959
MaeII	ACGT	3 cut(s)	147, 717, 2171
MaeIII	GTNAC	5 cut(s)	124, 1263, 1300, 1531, 2242
MalI	GATC	7 cut(s)	314, 335, 1290, 1971, 1993, 2076, 2155
MboI	GATC	7 cut(s)	312, 333, 1288, 1969, 1991, 2074, 2153
MfeI	CAATTG	1 cut(s)	1010
MflI	RGATCY	2 cut(s)	1991, 2153
MhlI	GDGCHC	2 cut(s)	826, 1833
MlsI	TGGCCA	1 cut(s)	2239
MluNI	TGGCCA	1 cut(s)	2239
Mly113I	GGCGCC	1 cut(s)	35
MlyI	GAGTC	6 cut(s)	881, 905, 1114, 1308, 1349, 1872
MmeI	TCCRAC	4 cut(s)	534, 941, 1294, 1828
Mox20I	TGGCCA	1 cut(s)	2239
Mph1103I	ATGCAT	1 cut(s)	531
MroXI	GAANNNNTTC	4 cut(s)	20, 597, 717, 1191
MscI	TGGCCA	1 cut(s)	2239
MseI	TTAA	4 cut(s)	476, 1041, 1565, 1908
MslI	CAYNNNNRTG	3 cut(s)	120, 940, 2196
Msp20I	TGGCCA	1 cut(s)	2239
MspA1I	CMGCKG	1 cut(s)	2083
MspI	CCGG	5 cut(s)	73, 139, 570, 1746, 2219
MspR9I	CCNGG	6 cut(s)	74, 140, 2000, 2050, 2150, 2220
MunI	CAATTG	1 cut(s)	1010
Mva1269I	GAATGC	3 cut(s)	1015, 1325, 1346
MvaI	CCWGG	3 cut(s)	2000, 2050, 2150
MwoI	GCNNNNNNNGC	4 cut(s)	104, 1196, 1649, 1685
NarI	GGCGCC	1 cut(s)	35
NciI	CCSGG	3 cut(s)	74, 140, 2220
NcoI	CCATGG	2 cut(s)	876, 1245
NdeI	CATATG	2 cut(s)	1841, 1888
NdeII	GATC	7 cut(s)	312, 333, 1288, 1969, 1991, 2074, 2153
NheI	GCTAGC	1 cut(s)	1943
NlaIV	GGNNCC	3 cut(s)	36, 1258, 2119
NmuCI	GTSAC	2 cut(s)	124, 1300
NsiI	ATGCAT	1 cut(s)	531
NspI	RCATGY	3 cut(s)	446, 529, 659
NspV	TTCGAA	2 cut(s)	392, 840
PciI	ACATGT	1 cut(s)	442
PctI	GAATGC	3 cut(s)	1015, 1325, 1346
PdmI	GAANNNNTTC	4 cut(s)	20, 597, 717, 1191
PfeI	GAWTC	9 cut(s)	367, 389, 394, 800, 885, 1250, 1785, 1800, 2274
PflFI	GACNNNGTC	1 cut(s)	1358
PfoI	TCCNGGA	2 cut(s)	72, 138
PinAI	ACCGGT	1 cut(s)	569
PkrI	GCNGC	5 cut(s)	92, 685, 807, 1325, 1661
PleI	GAGTC	6 cut(s)	880, 905, 1113, 1307, 1349, 1871
PluTI	GGCGCC	1 cut(s)	38
PpsI	GAGTC	6 cut(s)	880, 905, 1113, 1307, 1349, 1871
PscI	ACATGT	1 cut(s)	442
PsiI	TTATAA	1 cut(s)	1824
Psp124BI	GAGCTC	2 cut(s)	826, 1833
Psp6I	CCWGG	3 cut(s)	1998, 2048, 2148
PspFI	CCCAGC	2 cut(s)	80, 609
PspGI	CCWGG	3 cut(s)	1998, 2048, 2148
PspN4I	GGNNCC	3 cut(s)	36, 1258, 2119
PspPI	GGNCC	4 cut(s)	641, 2018, 2249, 2297
PstI	CTGCAG	1 cut(s)	1664
PstNI	CAGNNNCTG	2 cut(s)	321, 689
PsuI	RGATCY	2 cut(s)	1991, 2153
PsyI	GACNNNGTC	1 cut(s)	1358
PvuII	CAGCTG	1 cut(s)	2083
RsaI	GTAC	7 cut(s)	524, 660, 1031, 1838, 1871, 1882, 2190
RsaNI	GTAC	7 cut(s)	523, 659, 1030, 1837, 1870, 1881, 2189
RseI	CAYNNNNRTG	3 cut(s)	120, 940, 2196
SacI	GAGCTC	2 cut(s)	826, 1833
SalI	GTCGAC	1 cut(s)	2060
SaqAI	TTAA	4 cut(s)	476, 1041, 1565, 1908
SatI	GCNGC	5 cut(s)	91, 684, 806, 1324, 1660
Sau3AI	GATC	7 cut(s)	312, 333, 1288, 1969, 1991, 2074, 2153
Sau96I	GGNCC	4 cut(s)	641, 2018, 2249, 2297
SchI	GAGTC	6 cut(s)	881, 905, 1114, 1308, 1349, 1872
ScrFI	CCNGG	6 cut(s)	74, 140, 2000, 2050, 2150, 2220
SduI	GDGCHC	2 cut(s)	826, 1833
SexAI	ACCWGGT	1 cut(s)	2048
SfaNI	GCATC	7 cut(s)	327, 695, 1359, 1480, 1525, 2240, 2299
SfcI	CTRYAG	1 cut(s)	1660
SfoI	GGCGCC	1 cut(s)	36
SfuI	TTCGAA	2 cut(s)	392, 840
SinI	GGWCC	3 cut(s)	641, 2249, 2297
SmiMI	CAYNNNNRTG	3 cut(s)	120, 940, 2196
SmlI	CTYRAG	5 cut(s)	602, 817, 1205, 1987, 2104
SmoI	CTYRAG	5 cut(s)	602, 817, 1205, 1987, 2104
SsiI	CCGC	3 cut(s)	226, 1635, 2038
SspDI	GGCGCC	1 cut(s)	34
SspMI	CTAG	5 cut(s)	386, 827, 1818, 1944, 1959
SstI	GAGCTC	2 cut(s)	826, 1833
StyD4I	CCNGG	6 cut(s)	72, 138, 1998, 2048, 2148, 2218
StyI	CCWWGG	4 cut(s)	876, 1245, 1974, 2321
TaaI	ACNGT	5 cut(s)	31, 199, 256, 957, 1034
TaiI	ACGT	3 cut(s)	150, 720, 2174
TaqI	TCGA	6 cut(s)	42, 392, 784, 840, 990, 2061
TaqII	GACCGA	1 cut(s)	1348
TatI	WGTACW	5 cut(s)	522, 1029, 1836, 1869, 2188
TfiI	GAWTC	9 cut(s)	367, 389, 394, 800, 885, 1250, 1785, 1800, 2274
Tru1I	TTAA	4 cut(s)	476, 1041, 1565, 1908
Tru9I	TTAA	4 cut(s)	476, 1041, 1565, 1908
TscAI	CASTG	7 cut(s)	386, 469, 962, 1039, 1907, 1972, 2020
TseFI	GTSAC	2 cut(s)	124, 1300
TseI	GCWGC	5 cut(s)	90, 683, 805, 1323, 1659
Tsp45I	GTSAC	2 cut(s)	124, 1300
TspDTI	ATGAA	5 cut(s)	576, 840, 1201, 1301, 1374
TspGWI	ACGGA	1 cut(s)	2256
TspRI	CASTG	7 cut(s)	386, 469, 962, 1039, 1907, 1972, 2020
Tth111I	GACNNNGTC	1 cut(s)	1358
VpaK11BI	GGWCC	3 cut(s)	641, 2249, 2297
XapI	RAATTY	5 cut(s)	505, 595, 694, 2143, 2326
XceI	RCATGY	3 cut(s)	446, 529, 659
XmiI	GTMKAC	1 cut(s)	2061
XmnI	GAANNNNTTC	4 cut(s)	20, 597, 717, 1191
XspI	CTAG	5 cut(s)	386, 827, 1818, 1944, 1959
Zsp2I	ATGCAT	1 cut(s)	531

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.