Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0004504

Physical Location & Seq

Genomic Coordinates Reverse (-)

66987385 .. 66992807

Gene Structure 5423 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG458500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGGAGAAGAAGTTCCTTACGGTGGCGCCTTTCGAGTGCGCTTGGCGAAATGATTTGAAGTTCCGGGAAGCTGGGAGGGGCTGCGTGGCTTTTGAAGCGTTTGCTCACAATGATGTCACGCTGGTGTTCCGGGAGAACGTGGGAAGTCAGCACTATCATTACAAGAAAGATAATTGTCCTCACTATACTGTTATTTTGGGTAGTCATAGGAATAGGCGGTTGAAAATTGAGGTGGATGGGAAAACTGTGGTGGATGTGGAGGGTGTTGGTCTCTGTTCTTCCTCTGCATTTCAGAGCTATTGGATCAGTATCTGTGATGGTTTGATCAGTATTGGCAAGGGAAGGTACCCTTTTCAGAATCTTGTCTTTCAGTGGCTAGATTCGAATCCGAATTGTAGTGTTCGTTATGTTGGCCTTAGTAGTTGGGATAAACATGTTGGGTATAGGAATGTCAGTGTATTACCTTTAACTCACAACCATATATCCTTGTGGAAGAATTTGGATTGCAAGGAGTACATGCATGAGGAAGCTGGCGAAGAGGAGTTGGAGGATGAACGAACCGGTTATGAGAAATGGGGGCTTGAAAATTTTCTTGAGAGCTGGGAACTATCTGATGTTCTTTTCGTTGTTGGTCCAGAAGAAAGGCATGTACCAGCTCACAAGCCTATTTTGGCAGCATCTGGGAATTTCCCTATATCATCAGAAGACGTTCTCCACCTAAAGGGGATAACTTACCCCGTTCTCCATGCTCTACTTGAATATATTTACACAGGTCGAACCCAGATTTCAGAATCGCAGCTTAGTTCCTTGAGAGCTCTAGGTTTACAATTCGAAGTGATTTCATTAGTGAAGCAATGCGAGGAGTCCATGGAAAGATTCAAGCTAAATAAAAAGCTGTTTGACTCGGGCAAATGTGTAGAATTATCATACCCATGCAGTAGGCCACAGTGTTGGACAGTCTTCCCGTTTGGAGTTCCCATCAATGTCCTGAGGCTTAGGCAATTGCATTCAACTAACAAGTACAGTGATGTTAACATCTATATTGAAGGTCATGGCCTTATTGCCCAGTCGCATAAAATTATTCTCAGTTTATGGAGCCTCCCATTTGCAAAGATGTTCACAAATGGAATGTGTGAAACAATTTCCTCAGAGGTTCTTTTGAGAGACATATCACCAGAAGCGTTTCAAGCTTTGCTTGAGTTCATGTATAGTGGGGAACTCAATTTAGAAGCTACCATGGATTCTGGTGCCTTGTTACTCCAACTTTTTCTGTTGGCTGATCAATTTGGAGTCACTCTTCTTCATCAGGAATGCTGCAAAATGCTTTTAGAATGCCTATCAGAGGACTCGGTCTGTCTGATGCTTCAAGTGATTTCATCAATTCCCTCATGTCAACTTATTGAAGAAACTTGTGAGACGAACTTTTCTATGCACTTTGACTATTGCACAACTGCAAGCATTGACTTCGTTTTGTTAGATGATGCAACCTTTAGAAATATCATTCAGCATCCAGATTTGACTGTAACATCTGAAGAGAAGGTTCTCAATGCAATCTTAATGTGGGGTGCGAAAGCAAAGGAAGTGTGTGGTTGGGAGGTGGTGGATGAGATGATGACATATTCAACCGCAGAAGCTCTTTTTGGGGATAGGCTGCAGACAGTAAATGACCTTCTACCACTTGTTCGATTTGTGCTGCTGCCTTTGTCCTTGCTTGAGAAGTTACAGAAGAGCAACATTAGCAGGCATATGTCTATGTTTAATAACCTTGTCAAGGAGGCCATCAATTATATCGAGCATGGATTGACAAGACCGGAAAACGAGCACAACCTGAGAATCCAACATAGGCGATCTAGTTATAAGGAGCTCCAGTACATATGTGATGGGGACAGCAATGGAGTCCTGTACTTTGCAGGTACATCATATGGAAAACATCAGTGGGTTAATCCTGTTCTGGCGAAGAGAATTACAATTACAGCTAGCAGTCCCCCTTCTAGGTTCACTGATCCCAAGGTTTTGGTCTCAAGATCTTACCAGATTGAAGATGGGCGGAATAACACCTGGTGGATGGTCGACATTGGTGCAGATCATCAGCTGATTTGCAACTACTACACCTTGAGACATGATGGCTCCAGAGCACACATGAGATATTGGAATTTCCAGGGATCTCTGGATGGGATGACGTGGACAAATCTGAGAGTACACGAGAATGACCAAACTATATGCAAGCCGGGGCAGTTCGCATCATGGCCAGTTACAGGACCAAATGCTCTACTTCCGTTCAGATTCTTTAGGGTTGTTCTGACTGGACCTACAATGGATGCTTCAAACCCTTGGAATTTCTGCATTTGCTTTTTAGAACTCTATGGCTACTTCCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0030162 GO:0030163 GO:0031461 GO:0031625 GO:0032991 GO:0043161 GO:0043170 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0050789 GO:0051171 GO:0051246 GO:0051603 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BACK BTB F5_F8_type_C Methyltransf_FA

Protein Analysis

792

Amino Acids

90.67

Weight (kDa)

5.73

Isoelectric Point (pI)

46.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_FA	PF12248	11 - 151	3.4e-30	Farnesoic acid 0-methyl transferase
BTB	PF00651	194 - 291	5.8e-14	BTB/POZ domain
BTB	PF00651	333 - 444	4.6e-18	BTB/POZ domain
BTB_KLHL33	PF21536	372 - 410	1.5e-06	Kelch-like protein 33-like, BTB/POZ domain
BACK	PF07707	452 - 527	2.2e-06	BTB And C-terminal Kelch

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004504)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30600 AT2G30600 AT2G30600 AT2G30600 AT2G30600 AT2G30600
fragaria_vesca	FvH4_2g37320 FvH4_2g37320 FvH4_2g37320 FvH4_2g37320 FvH4_2g37320 FvH4_2g37320
malus_domestica	MD08G1002100.v1.1
prunus_persica	Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1
pyrus_communis	pycom08g00140
rosa_chinensis	RchiOBHm_Chr6g0304381
rosa_laevigata	RLG00000010985
rosa_multiflora	Rmu_ssc0000218.1_g000043
rosa_roxburghii	Rroxscaffold_7G00163790
rosa_rugosa	Rorug06G0330900 Rorug06G0331000
rosa_samantha	Rh6AG443900 Rh6BG458500 Rh6CG456700 Rh6DG443400
rosa_wichuraiana	Rw6G038530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1857
Acc36I	ACCTGC	1 cut(s)	1901
Acc65I	GGTACC	1 cut(s)	345
AccB1I	GGYRCC	3 cut(s)	25, 345, 1247
AccI	GTMKAC	1 cut(s)	2070
AciI	CCGC	3 cut(s)	217, 1626, 2047
AclWI	GGATC	3 cut(s)	311, 1997, 2170
AcoI	YGGCCR	1 cut(s)	2246
AcsI	RAATTY	5 cut(s)	496, 586, 685, 2152, 2335
AcuI	CTGAAG	1 cut(s)	1551
AcyI	GRCGYC	1 cut(s)	26
AdeI	CACNNNGTG	1 cut(s)	2061
AfaI	GTAC	8 cut(s)	347, 515, 651, 1022, 1871, 1904, 1915, 2199
AfiI	CCNNNNNNNGG	6 cut(s)	22, 721, 1342, 1771, 1992, 2255
AflIII	ACRYGT	1 cut(s)	433
AgeI	ACCGGT	1 cut(s)	560
AjiI	CACGTC	1 cut(s)	2181
AjnI	CCWGG	2 cut(s)	2057, 2157
AjuI	GAANNNNNNNTTGG	2 cut(s)	1623, 1655
AleI	CACNNNNGTG	1 cut(s)	122
AloI	GAACNNNNNNTCC	1 cut(s)	28
Alw21I	GWGCWC	4 cut(s)	817, 1824, 1866, 2137
Alw26I	GTCTC	5 cut(s)	275, 1158, 1409, 2023, 2110
AlwI	GGATC	3 cut(s)	311, 1997, 2170
AlwNI	CAGNNNCTG	2 cut(s)	312, 680
Ama87I	CYCGRG	1 cut(s)	904
AoxI	GGCC	5 cut(s)	412, 941, 1054, 1776, 2246
ApeKI	GCWGC	7 cut(s)	81, 674, 796, 1314, 1651, 1693, 1696
ApoI	RAATTY	5 cut(s)	496, 586, 685, 2152, 2335
AsiGI	ACCGGT	1 cut(s)	560
Asp700I	GAANNNNTTC	4 cut(s)	11, 588, 708, 1182
Asp718I	GGTACC	1 cut(s)	345
AspLEI	GCGC	2 cut(s)	28, 41
AspS9I	GGNCC	3 cut(s)	632, 2258, 2306
AsuC2I	CCSGG	3 cut(s)	65, 131, 2229
AsuHPI	GGTGA	1 cut(s)	1164
AsuII	TTCGAA	2 cut(s)	383, 831
AsuNHI	GCTAGC	1 cut(s)	1976
AvaI	CYCGRG	1 cut(s)	904
AvaII	GGWCC	3 cut(s)	632, 2258, 2306
AxyI	CCTNAGG	1 cut(s)	989
BalI	TGGCCA	1 cut(s)	2248
BanI	GGYRCC	3 cut(s)	25, 345, 1247
BanII	GRGCYC	2 cut(s)	817, 1866
BarI	GAAGNNNNNNTAC	2 cut(s)	1653, 1685
BauI	CACGAG	1 cut(s)	2201
BbsI	GAAGAC	2 cut(s)	711, 952
Bbv12I	GWGCWC	4 cut(s)	817, 1824, 1866, 2137
BbvI	GCAGC	7 cut(s)	68, 686, 808, 1301, 1638, 1680, 1683
BccI	CCATC	9 cut(s)	230, 311, 986, 1787, 1874, 2036, 2059, 2117, 2165
BcgI	CGANNNNNNTGC	4 cut(s)	1447, 1481, 2060, 2094
BciT130I	CCWGG	2 cut(s)	2059, 2159
BclI	TGATCA	2 cut(s)	324, 1279
BcnI	CCSGG	3 cut(s)	65, 131, 2229
BcoDI	GTCTC	5 cut(s)	275, 1158, 1409, 2023, 2110
BfaI	CTAG	5 cut(s)	377, 818, 1851, 1977, 1992
BfmI	CTRYAG	1 cut(s)	1652
BfoI	RGCGCY	1 cut(s)	29
BfuAI	ACCTGC	1 cut(s)	1901
BglII	AGATCT	1 cut(s)	2024
BisI	GCNGC	7 cut(s)	82, 675, 797, 1315, 1652, 1694, 1697
BlsI	GCNGC	7 cut(s)	83, 676, 798, 1316, 1653, 1695, 1698
Bme1390I	CCNGG	5 cut(s)	65, 131, 2059, 2159, 2229
Bme18I	GGWCC	3 cut(s)	632, 2258, 2306
BmeT110I	CYCGRG	1 cut(s)	904
BmgBI	CACGTC	1 cut(s)	2181
BmgT120I	GGNCC	3 cut(s)	632, 2258, 2306
BmiI	GGNNCC	5 cut(s)	27, 347, 1097, 1249, 2128
BmrFI	CCNGG	5 cut(s)	65, 131, 2059, 2159, 2229
BmrI	ACTGGG	1 cut(s)	1060
BmsI	GCATC	6 cut(s)	686, 1350, 1471, 1516, 2249, 2308
BmtI	GCTAGC	1 cut(s)	1980
BmuI	ACTGGG	1 cut(s)	1060
BpiI	GAAGAC	2 cut(s)	711, 952
BpmI	CTGGAG	2 cut(s)	1850, 2113
Bpu10I	CCTNAGC	1 cut(s)	995
Bpu14I	TTCGAA	2 cut(s)	383, 831
BpuEI	CTTGAG	6 cut(s)	614, 829, 1217, 1733, 2005, 2134
BpuMI	CCSGG	3 cut(s)	65, 131, 2229
BsaBI	GATNNNNATC	2 cut(s)	308, 384
BsaHI	GRCGYC	1 cut(s)	26
BsaI	GGTCTC	2 cut(s)	275, 2023
BsaJI	CCNNGG	6 cut(s)	867, 1236, 2007, 2158, 2228, 2330
BsaWI	WCCGGW	2 cut(s)	560, 1810
BsaXI	ACNNNNNCTCC	3 cut(s)	26, 1853, 1883
Bsc4I	CCNNNNNNNGG	6 cut(s)	22, 721, 1342, 1771, 1992, 2255
Bse118I	RCCGGY	1 cut(s)	560
Bse1I	ACTGG	4 cut(s)	1066, 1867, 2249, 2308
Bse21I	CCTNAGG	1 cut(s)	989
Bse3DI	GCAATG	2 cut(s)	860, 1897
Bse8I	GATNNNNATC	2 cut(s)	308, 384
BseBI	CCWGG	2 cut(s)	2059, 2159
BseDI	CCNNGG	6 cut(s)	867, 1236, 2007, 2158, 2228, 2330
BseGI	GGATG	9 cut(s)	241, 259, 556, 1507, 1609, 2070, 2176, 2181, 2323
BseJI	GATNNNNATC	2 cut(s)	308, 384
BseLI	CCNNNNNNNGG	6 cut(s)	22, 721, 1342, 1771, 1992, 2255
BseMI	GCAATG	2 cut(s)	860, 1897
BseMII	CTCAG	5 cut(s)	980, 1099, 1161, 1820, 2183
BseNI	ACTGG	4 cut(s)	1066, 1867, 2249, 2308
BseRI	GAGGAG	2 cut(s)	554, 875
BseXI	GCAGC	7 cut(s)	68, 686, 808, 1301, 1638, 1680, 1683
BseYI	CCCAGC	2 cut(s)	71, 600
BsgI	GTGCAG	1 cut(s)	2100
BshFI	GGCC	5 cut(s)	414, 943, 1056, 1778, 2248
BshNI	GGYRCC	3 cut(s)	25, 345, 1247
BshTI	ACCGGT	1 cut(s)	560
BsiHKAI	GWGCWC	4 cut(s)	817, 1824, 1866, 2137
BsiHKCI	CYCGRG	1 cut(s)	904
BsiSI	CCGG	5 cut(s)	64, 130, 561, 1811, 2228
BslFI	GGGAC	2 cut(s)	1898, 1968
BslI	CCNNNNNNNGG	6 cut(s)	22, 721, 1342, 1771, 1992, 2255
BsmAI	GTCTC	5 cut(s)	275, 1158, 1409, 2023, 2110
BsmBI	CGTCTC	1 cut(s)	1409
BsmFI	GGGAC	2 cut(s)	1898, 1968
BsmI	GAATGC	3 cut(s)	1006, 1316, 1337
BsnI	GGCC	5 cut(s)	414, 943, 1056, 1778, 2248
Bso31I	GGTCTC	2 cut(s)	275, 2023
BsoBI	CYCGRG	1 cut(s)	904
Bsp119I	TTCGAA	2 cut(s)	383, 831
Bsp1286I	GDGCHC	4 cut(s)	817, 1824, 1866, 2137
Bsp143I	GATC	8 cut(s)	303, 324, 1279, 1847, 2002, 2024, 2083, 2162
Bsp19I	CCATGG	2 cut(s)	867, 1236
BspACI	CCGC	3 cut(s)	217, 1626, 2047
BspANI	GGCC	5 cut(s)	414, 943, 1056, 1778, 2248
BspCNI	CTCAG	5 cut(s)	981, 1098, 1160, 1821, 2184
BspLI	GGNNCC	5 cut(s)	27, 347, 1097, 1249, 2128
BspMAI	CTGCAG	1 cut(s)	1656
BspMI	ACCTGC	1 cut(s)	1901
BspOI	GCTAGC	1 cut(s)	1980
BspPI	GGATC	3 cut(s)	311, 1997, 2170
BspQI	GCTCTTC	1 cut(s)	1721
BspT104I	TTCGAA	2 cut(s)	383, 831
BspT107I	GGYRCC	3 cut(s)	25, 345, 1247
BspTNI	GGTCTC	2 cut(s)	275, 2023
BsrDI	GCAATG	2 cut(s)	860, 1897
BsrFI	RCCGGY	1 cut(s)	560
BsrI	ACTGG	4 cut(s)	1066, 1867, 2249, 2308
BssAI	RCCGGY	1 cut(s)	560
BssECI	CCNNGG	6 cut(s)	867, 1236, 2007, 2158, 2228, 2330
BssMI	GATC	8 cut(s)	303, 324, 1279, 1847, 2002, 2024, 2083, 2162
BssNI	GRCGYC	1 cut(s)	26
BssSI	CACGAG	1 cut(s)	2201
BssT1I	CCWWGG	4 cut(s)	867, 1236, 2007, 2330
Bst2BI	CACGAG	1 cut(s)	2201
Bst2UI	CCWGG	2 cut(s)	2059, 2159
Bst4CI	ACNGT	8 cut(s)	22, 190, 247, 948, 958, 1025, 1522, 1660
Bst6I	CTCTTC	5 cut(s)	531, 1302, 1527, 1721, 1952
BstACI	GRCGYC	1 cut(s)	26
BstBI	TTCGAA	2 cut(s)	383, 831
BstC8I	GCNNGC	5 cut(s)	532, 1456, 1742, 1978, 2225
BstDEI	CTNAG	8 cut(s)	416, 800, 989, 995, 1085, 1147, 1829, 2192
BstDSI	CCRYGG	2 cut(s)	867, 1236
BstENI	CCTNNNNNAGG	2 cut(s)	1340, 1769
BstF5I	GGATG	9 cut(s)	241, 259, 556, 1507, 1609, 2070, 2176, 2181, 2323
BstH2I	RGCGCY	1 cut(s)	29
BstHHI	GCGC	2 cut(s)	28, 41
BstKTI	GATC	8 cut(s)	306, 327, 1282, 1850, 2005, 2027, 2086, 2165
BstMAI	GTCTC	5 cut(s)	275, 1158, 1409, 2023, 2110
BstMBI	GATC	8 cut(s)	303, 324, 1279, 1847, 2002, 2024, 2083, 2162
BstMWI	GCNNNNNNNGC	3 cut(s)	95, 1187, 1737
BstNI	CCWGG	2 cut(s)	2059, 2159
BstNSI	RCATGY	3 cut(s)	437, 520, 650
BstSCI	CCNGG	5 cut(s)	63, 129, 2057, 2157, 2227
BstSFI	CTRYAG	1 cut(s)	1652
BstV1I	GCAGC	7 cut(s)	68, 686, 808, 1301, 1638, 1680, 1683
BstV2I	GAAGAC	2 cut(s)	711, 952
BstX2I	RGATCY	2 cut(s)	2024, 2162
BstXI	CCANNNNNNTGG	2 cut(s)	951, 2014
BstYI	RGATCY	2 cut(s)	2024, 2162
Bsu36I	CCTNAGG	1 cut(s)	989
BsuRI	GGCC	5 cut(s)	414, 943, 1056, 1778, 2248
BtgI	CCRYGG	2 cut(s)	867, 1236
BtrI	CACGTC	1 cut(s)	2181
BtsCI	GGATG	9 cut(s)	241, 259, 556, 1507, 1609, 2070, 2176, 2181, 2323
BtsIMutI	CAGTG	6 cut(s)	377, 460, 953, 1030, 1940, 1998
BveI	ACCTGC	1 cut(s)	1901
Cac8I	GCNNGC	5 cut(s)	532, 1456, 1742, 1978, 2225
CaiI	CAGNNNCTG	2 cut(s)	312, 680
CfoI	GCGC	2 cut(s)	28, 41
Cfr10I	RCCGGY	1 cut(s)	560
Cfr13I	GGNCC	3 cut(s)	632, 2258, 2306
CsiI	ACCWGGT	1 cut(s)	2057
Csp6I	GTAC	8 cut(s)	346, 514, 650, 1021, 1870, 1903, 1914, 2198
CspAI	ACCGGT	1 cut(s)	560
CviQI	GTAC	8 cut(s)	346, 514, 650, 1021, 1870, 1903, 1914, 2198
DdeI	CTNAG	8 cut(s)	416, 800, 989, 995, 1085, 1147, 1829, 2192
DinI	GGCGCC	1 cut(s)	27
DpnI	GATC	8 cut(s)	305, 326, 1281, 1849, 2004, 2026, 2085, 2164
DpnII	GATC	8 cut(s)	303, 324, 1279, 1847, 2002, 2024, 2083, 2162
DraIII	CACNNNGTG	1 cut(s)	2061
EaeI	YGGCCR	1 cut(s)	2246
Eam1104I	CTCTTC	5 cut(s)	531, 1302, 1527, 1721, 1952
EarI	CTCTTC	5 cut(s)	531, 1302, 1527, 1721, 1952
EciI	GGCGGA	1 cut(s)	2062
Ecl136II	GAGCTC	2 cut(s)	815, 1864
Eco130I	CCWWGG	4 cut(s)	867, 1236, 2007, 2330
Eco24I	GRGCYC	2 cut(s)	817, 1866
Eco31I	GGTCTC	2 cut(s)	275, 2023
Eco47I	GGWCC	3 cut(s)	632, 2258, 2306
Eco53kI	GAGCTC	2 cut(s)	815, 1864
Eco57I	CTGAAG	1 cut(s)	1551
Eco81I	CCTNAGG	1 cut(s)	989
Eco88I	CYCGRG	1 cut(s)	904
EcoICRI	GAGCTC	2 cut(s)	815, 1864
EcoNI	CCTNNNNNAGG	2 cut(s)	1340, 1769
EcoRII	CCWGG	2 cut(s)	2057, 2157
EcoT14I	CCWWGG	4 cut(s)	867, 1236, 2007, 2330
EcoT22I	ATGCAT	1 cut(s)	522
EcoT38I	GRGCYC	2 cut(s)	817, 1866
EgeI	GGCGCC	1 cut(s)	27
EheI	GGCGCC	1 cut(s)	27
ErhI	CCWWGG	4 cut(s)	867, 1236, 2007, 2330
Esp3I	CGTCTC	1 cut(s)	1409
FalI	AAGNNNNNCTT	4 cut(s)	334, 366, 1179, 1211
FaqI	GGGAC	2 cut(s)	1898, 1968
FauNDI	CATATG	3 cut(s)	1746, 1874, 1921
FbaI	TGATCA	2 cut(s)	324, 1279
FblI	GTMKAC	1 cut(s)	2070
Fnu4HI	GCNGC	7 cut(s)	82, 675, 797, 1315, 1652, 1694, 1697
FokI	GGATG	9 cut(s)	248, 266, 563, 1494, 1616, 2077, 2183, 2188, 2330
FriOI	GRGCYC	2 cut(s)	817, 1866
Fsp4HI	GCNGC	7 cut(s)	82, 675, 797, 1315, 1652, 1694, 1697
FspBI	CTAG	5 cut(s)	377, 818, 1851, 1977, 1992
GlaI	GCGC	2 cut(s)	27, 40
GluI	GCNGC	7 cut(s)	82, 675, 797, 1315, 1652, 1694, 1697
GsaI	CCCAGC	2 cut(s)	75, 604
GsuI	CTGGAG	2 cut(s)	1850, 2113
HaeII	RGCGCY	1 cut(s)	29
HaeIII	GGCC	5 cut(s)	414, 943, 1056, 1778, 2248
HapII	CCGG	5 cut(s)	64, 130, 561, 1811, 2228
HhaI	GCGC	2 cut(s)	28, 41
Hin1I	GRCGYC	1 cut(s)	26
Hin6I	GCGC	2 cut(s)	26, 39
HinP1I	GCGC	2 cut(s)	26, 39
HincII	GTYRAC	3 cut(s)	1033, 1394, 2071
HindII	GTYRAC	3 cut(s)	1033, 1394, 2071
HindIII	AAGCTT	1 cut(s)	1188
HpaI	GTTAAC	1 cut(s)	1033
HpaII	CCGG	5 cut(s)	64, 130, 561, 1811, 2228
HphI	GGTGA	1 cut(s)	1164
Hpy166II	GTNNAC	8 cut(s)	824, 1033, 1119, 1394, 1998, 2071, 2184, 2200
Hpy188III	TCNNGA	8 cut(s)	593, 635, 988, 1307, 1511, 2022, 2130, 2168
Hpy8I	GTNNAC	8 cut(s)	824, 1033, 1119, 1394, 1998, 2071, 2184, 2200
HpyAV	CCTTC	5 cut(s)	336, 1040, 1531, 1679, 1998
HpyCH4III	ACNGT	8 cut(s)	22, 190, 247, 948, 958, 1025, 1522, 1660
HpyCH4IV	ACGT	3 cut(s)	138, 708, 2180
HpyF10VI	GCNNNNNNNGC	3 cut(s)	95, 1187, 1737
HpyF3I	CTNAG	8 cut(s)	416, 800, 989, 995, 1085, 1147, 1829, 2192
HpySE526I	ACGT	3 cut(s)	138, 708, 2180
Hsp92I	GRCGYC	1 cut(s)	26
HspAI	GCGC	2 cut(s)	26, 39
KasI	GGCGCC	1 cut(s)	25
KpnI	GGTACC	1 cut(s)	349
Ksp22I	TGATCA	2 cut(s)	324, 1279
KspAI	GTTAAC	1 cut(s)	1033
Kzo9I	GATC	8 cut(s)	303, 324, 1279, 1847, 2002, 2024, 2083, 2162
LguI	GCTCTTC	1 cut(s)	1721
LmnI	GCTCC	4 cut(s)	1095, 1861, 1869, 2132
Lsp1109I	GCAGC	7 cut(s)	68, 686, 808, 1301, 1638, 1680, 1683
LweI	GCATC	6 cut(s)	686, 1350, 1471, 1516, 2249, 2308
MabI	ACCWGGT	1 cut(s)	2057
MaeI	CTAG	5 cut(s)	377, 818, 1851, 1977, 1992
MaeII	ACGT	3 cut(s)	138, 708, 2180
MaeIII	GTNAC	6 cut(s)	115, 1254, 1291, 1522, 1719, 2251
MalI	GATC	8 cut(s)	305, 326, 1281, 1849, 2004, 2026, 2085, 2164
MboI	GATC	8 cut(s)	303, 324, 1279, 1847, 2002, 2024, 2083, 2162
MfeI	CAATTG	1 cut(s)	1001
MflI	RGATCY	2 cut(s)	2024, 2162
MhlI	GDGCHC	4 cut(s)	817, 1824, 1866, 2137
MlsI	TGGCCA	1 cut(s)	2248
MluNI	TGGCCA	1 cut(s)	2248
Mly113I	GGCGCC	1 cut(s)	26
MlyI	GAGTC	5 cut(s)	872, 896, 1299, 1340, 1905
MmeI	TCCRAC	4 cut(s)	525, 932, 1285, 1861
Mox20I	TGGCCA	1 cut(s)	2248
Mph1103I	ATGCAT	1 cut(s)	522
MroXI	GAANNNNTTC	4 cut(s)	11, 588, 708, 1182
MscI	TGGCCA	1 cut(s)	2248
MseI	TTAA	5 cut(s)	467, 1032, 1556, 1758, 1941
MslI	CAYNNNNRTG	4 cut(s)	111, 122, 931, 2205
Msp20I	TGGCCA	1 cut(s)	2248
MspA1I	CMGCKG	1 cut(s)	2092
MspI	CCGG	5 cut(s)	64, 130, 561, 1811, 2228
MspR9I	CCNGG	5 cut(s)	65, 131, 2059, 2159, 2229
MunI	CAATTG	1 cut(s)	1001
Mva1269I	GAATGC	3 cut(s)	1006, 1316, 1337
MvaI	CCWGG	2 cut(s)	2059, 2159
MwoI	GCNNNNNNNGC	3 cut(s)	95, 1187, 1737
NarI	GGCGCC	1 cut(s)	26
NciI	CCSGG	3 cut(s)	65, 131, 2229
NcoI	CCATGG	2 cut(s)	867, 1236
NdeI	CATATG	3 cut(s)	1746, 1874, 1921
NdeII	GATC	8 cut(s)	303, 324, 1279, 1847, 2002, 2024, 2083, 2162
NheI	GCTAGC	1 cut(s)	1976
NlaIV	GGNNCC	5 cut(s)	27, 347, 1097, 1249, 2128
NmuCI	GTSAC	2 cut(s)	115, 1291
NsiI	ATGCAT	1 cut(s)	522
NspI	RCATGY	3 cut(s)	437, 520, 650
NspV	TTCGAA	2 cut(s)	383, 831
OliI	CACNNNNGTG	1 cut(s)	122
PciI	ACATGT	1 cut(s)	433
PciSI	GCTCTTC	1 cut(s)	1721
PctI	GAATGC	3 cut(s)	1006, 1316, 1337
PdmI	GAANNNNTTC	4 cut(s)	11, 588, 708, 1182
PfeI	GAWTC	8 cut(s)	358, 380, 385, 791, 876, 1241, 1833, 2283
PflFI	GACNNNGTC	1 cut(s)	1349
PfoI	TCCNGGA	2 cut(s)	63, 129
PinAI	ACCGGT	1 cut(s)	560
PkrI	GCNGC	7 cut(s)	83, 676, 798, 1316, 1653, 1695, 1698
PleI	GAGTC	5 cut(s)	871, 896, 1298, 1340, 1904
PluTI	GGCGCC	1 cut(s)	29
PpsI	GAGTC	5 cut(s)	871, 896, 1298, 1340, 1904
PscI	ACATGT	1 cut(s)	433
PsiI	TTATAA	1 cut(s)	1857
Psp124BI	GAGCTC	2 cut(s)	817, 1866
Psp6I	CCWGG	2 cut(s)	2057, 2157
PspFI	CCCAGC	2 cut(s)	71, 600
PspGI	CCWGG	2 cut(s)	2057, 2157
PspN4I	GGNNCC	5 cut(s)	27, 347, 1097, 1249, 2128
PspPI	GGNCC	3 cut(s)	632, 2258, 2306
PstI	CTGCAG	1 cut(s)	1656
PstNI	CAGNNNCTG	2 cut(s)	312, 680
PsuI	RGATCY	2 cut(s)	2024, 2162
PsyI	GACNNNGTC	1 cut(s)	1349
PvuII	CAGCTG	1 cut(s)	2092
RsaI	GTAC	8 cut(s)	347, 515, 651, 1022, 1871, 1904, 1915, 2199
RsaNI	GTAC	8 cut(s)	346, 514, 650, 1021, 1870, 1903, 1914, 2198
RseI	CAYNNNNRTG	4 cut(s)	111, 122, 931, 2205
SacI	GAGCTC	2 cut(s)	817, 1866
SalI	GTCGAC	1 cut(s)	2069
SapI	GCTCTTC	1 cut(s)	1721
SaqAI	TTAA	5 cut(s)	467, 1032, 1556, 1758, 1941
SatI	GCNGC	7 cut(s)	82, 675, 797, 1315, 1652, 1694, 1697
Sau3AI	GATC	8 cut(s)	303, 324, 1279, 1847, 2002, 2024, 2083, 2162
Sau96I	GGNCC	3 cut(s)	632, 2258, 2306
SchI	GAGTC	5 cut(s)	872, 896, 1299, 1340, 1905
ScrFI	CCNGG	5 cut(s)	65, 131, 2059, 2159, 2229
SduI	GDGCHC	4 cut(s)	817, 1824, 1866, 2137
SexAI	ACCWGGT	1 cut(s)	2057
SfaNI	GCATC	6 cut(s)	686, 1350, 1471, 1516, 2249, 2308
SfcI	CTRYAG	1 cut(s)	1652
SfoI	GGCGCC	1 cut(s)	27
SfuI	TTCGAA	2 cut(s)	383, 831
SinI	GGWCC	3 cut(s)	632, 2258, 2306
SmiMI	CAYNNNNRTG	4 cut(s)	111, 122, 931, 2205
SmlI	CTYRAG	6 cut(s)	593, 808, 1196, 1712, 2020, 2113
SmoI	CTYRAG	6 cut(s)	593, 808, 1196, 1712, 2020, 2113
SsiI	CCGC	3 cut(s)	217, 1626, 2047
SspDI	GGCGCC	1 cut(s)	25
SspMI	CTAG	5 cut(s)	377, 818, 1851, 1977, 1992
SstI	GAGCTC	2 cut(s)	817, 1866
StyD4I	CCNGG	5 cut(s)	63, 129, 2057, 2157, 2227
StyI	CCWWGG	4 cut(s)	867, 1236, 2007, 2330
TaaI	ACNGT	8 cut(s)	22, 190, 247, 948, 958, 1025, 1522, 1660
TaiI	ACGT	3 cut(s)	141, 711, 2183
TaqI	TCGA	7 cut(s)	33, 383, 775, 831, 1684, 1791, 2070
TaqII	GACCGA	1 cut(s)	1339
TatI	WGTACW	5 cut(s)	513, 1020, 1869, 1902, 2197
TfiI	GAWTC	8 cut(s)	358, 380, 385, 791, 876, 1241, 1833, 2283
Tru1I	TTAA	5 cut(s)	467, 1032, 1556, 1758, 1941
Tru9I	TTAA	5 cut(s)	467, 1032, 1556, 1758, 1941
TscAI	CASTG	6 cut(s)	377, 460, 953, 1030, 1940, 2005
TseFI	GTSAC	2 cut(s)	115, 1291
TseI	GCWGC	7 cut(s)	81, 674, 796, 1314, 1651, 1693, 1696
Tsp45I	GTSAC	2 cut(s)	115, 1291
TspDTI	ATGAA	5 cut(s)	567, 831, 1192, 1292, 1365
TspGWI	ACGGA	1 cut(s)	2265
TspRI	CASTG	6 cut(s)	377, 460, 953, 1030, 1940, 2005
Tth111I	GACNNNGTC	1 cut(s)	1349
VpaK11BI	GGWCC	3 cut(s)	632, 2258, 2306
XagI	CCTNNNNNAGG	2 cut(s)	1340, 1769
XapI	RAATTY	5 cut(s)	496, 586, 685, 2152, 2335
XceI	RCATGY	3 cut(s)	437, 520, 650
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2039
XmiI	GTMKAC	1 cut(s)	2070
XmnI	GAANNNNTTC	4 cut(s)	11, 588, 708, 1182
XspI	CTAG	5 cut(s)	377, 818, 1851, 1977, 1992
Zsp2I	ATGCAT	1 cut(s)	522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.