Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000218.1

Orthogroup ID

OG0004504

Physical Location & Seq

Genomic Coordinates Forward (+)

169462 .. 175558

Gene Structure 6097 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000218.1_g000043.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2577 bp

atggagaagaagttccttacggtggcgcctttcgagtgcgcttggcgaaatgatttgaagttccgggaagctgggaggggctgcgtggcttttgaagcgtttgctcacaatgatgtcacgctcgtgttccgggagaacgtgggaagtcagcactatcattacaagaaagataattgtcctcactatactgttattttgggtagtcataggaataggcggttgaaaattgaggtggatgggaaaactgtggtggatgtggagggtgttggtctttgctcttcctctgcatttcagagctattggatcagtatctgtgatggtttgatcagtgttggcaagggaagatacccttttcagaatcttgtctttcagtggctagattcaaatcccaattgtagtgttcgttatgttgggcttagtagttgggataaacatgttgggtataggaatgtcagtgtattacccttaactcaaaaccatatatccttgtggaagaatttggactgcaaggagtacatgcatgaggaagctggcgaagaggagttgcaggatgaacgaaccggttatgagaaatgggggcttgaaaattttcttgagagctgggagctatctgatgttgttttcgttgttggtccagaagaaaggcatgtaccagctcacaagcctattttggcagcatctgggaatttccctatatcatcagaagaccttctccagctaaaggggataacttatccccttctccatgctctacttgaatatatttacacaggtcgaacccaggtataccatcctcttatctcagatacttgtgtatgctcttacagggaaagaaatactattgagatctcaaaattggacagccttcccgtttggagtcatggccttattgcccagtcgcataaaattattctcagtttatggagtctcccatttgcaaagatgttcacaaatggaatgtgtgaaacaatttcctcagaggttcttttgagagacatatcaccagaagcgtttcaagctttgcttgagttcatgtatagtggggagctcaatttagaagctaccatggattctggtgccttgttactccaactttttctgttggctgatcaatttggagtcactcttcttcatcaggaatgctgcaaaatgcttttagaatgcctatcagaggactcggtctgtctgatgcttcaagtgatttcatcaattccctcatgtcaacttattgaagaaacttgtgagacgaacttttccatgcactttgactattgcacaactgcaagcattgacttcgttttgttagatgatgcaacctttagaaatatcattcagcatccagatttgactgtaacatctgaagagaaggttctcaatgcaatcttaatgtggggtgcgaaagcaaaggaagtgtgtggatgggaggtggtggatgagatgatgacatattcaaccgcagaagctctttttggggataggctgcagacagtaaatgaccttctaccacttgttcgatttttgctgctgcctttgtccttgcttgagaagttacagaagagcaacattagcaggcatatgtctatgtttaataatcttgtcaaggaggccatcaattgtatcgagcatggattgacaagaccggaaaacgagcacaacctgagaatccaacataggcgatctagttataaggagctccagtacatatgtgatggggacagcaatggagtcctgtactttgcaggtacatcatatggagaacatcagtgggttaatcctgttctggcgaagagaattacaattacagctagcagtcccccttctaggttcactgatcccaaggttttggtctcaagatcttaccagggaacatccttcgctgggccacaaattgaagatgggcggaataacacctggtggatggtcgacattggtgcagatcatcagctgatttgcaactactacaccttgagacatgatggctcgaggatttttaatcaaaacctgagaatccaacataggcgatctagttataaggagctccagtacatatgtgatggggacagcaatggagtcctgtactttgcaggtacatcatatggagaacatcagtgggttaatcctgttctggcgaagagaattacaattacagctagcagtcccccttctaggttcactgatcccaaggttttggtctcaagatcttaccagggaacatccttcgctgggccacagattgaagatgggcggaataacacctggtggatggtcgacattggtgcagatcatcagctgatttgcaactactacaccttgagacatgatggctccagagcatacatgagatattggaatttccagggatctctggatgggaagacgtggacaaatctgagagtacacgagaatgaccaaactatatgcaagccggggcagttcgcatcatggccagttacaggaccaaatgctctactgccgttcagattctttagggttgttctgactggacctacaatggatgcttcaaacccttggaatttctgcatttgctttttagaactctatggctacttccactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0030162 GO:0030163 GO:0031461 GO:0031625 GO:0032991 GO:0043161 GO:0043170 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0050789 GO:0051171 GO:0051246 GO:0051603 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BACK BTB F5_F8_type_C Methyltransf_FA

Protein Analysis

858

Amino Acids

98.02

Weight (kDa)

5.72

Isoelectric Point (pI)

44.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004504)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30600 AT2G30600 AT2G30600 AT2G30600 AT2G30600 AT2G30600
fragaria_vesca	FvH4_2g37320 FvH4_2g37320 FvH4_2g37320 FvH4_2g37320 FvH4_2g37320 FvH4_2g37320
malus_domestica	MD08G1002100.v1.1
prunus_persica	Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1 Prupe.1G353800_v2.0.a1
pyrus_communis	pycom08g00140
rosa_chinensis	RchiOBHm_Chr6g0304381
rosa_laevigata	RLG00000010985
rosa_multiflora	Rmu_ssc0000218.1_g000043
rosa_roxburghii	Rroxscaffold_7G00163790
rosa_rugosa	Rorug06G0330900 Rorug06G0331000
rosa_samantha	Rh6AG443900 Rh6BG458500 Rh6CG456700 Rh6DG443400
rosa_wichuraiana	Rw6G038530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1686, 2031
Acc36I	ACCTGC	2 cut(s)	1730, 2075
AccB1I	GGYRCC	2 cut(s)	25, 1076
AccI	GTMKAC	3 cut(s)	786, 1923, 2268
AciI	CCGC	4 cut(s)	217, 1455, 1900, 2245
AclWI	GGATC	4 cut(s)	311, 1826, 2171, 2368
AcoI	YGGCCR	1 cut(s)	2444
AcsI	RAATTY	5 cut(s)	496, 586, 685, 2350, 2533
AcuI	CTGAAG	1 cut(s)	1380
AcyI	GRCGYC	1 cut(s)	26
AdeI	CACNNNGTG	2 cut(s)	1914, 2259
AfaI	GTAC	9 cut(s)	515, 651, 1700, 1733, 1744, 2045, 2078, 2089, 2397
AfiI	CCNNNNNNNGG	8 cut(s)	22, 721, 1171, 1821, 1878, 2166, 2223, 2453
AflIII	ACRYGT	1 cut(s)	433
AgeI	ACCGGT	1 cut(s)	560
AjiI	CACGTC	1 cut(s)	2379
AjnI	CCWGG	6 cut(s)	780, 1860, 1910, 2205, 2255, 2355
AjuI	GAANNNNNNNTTGG	2 cut(s)	1452, 1484
AleI	CACNNNNGTG	1 cut(s)	122
AloI	GAACNNNNNNTCC	1 cut(s)	28
Alw21I	GWGCWC	4 cut(s)	1050, 1653, 1695, 2040
Alw26I	GTCTC	7 cut(s)	932, 987, 1238, 1852, 1963, 2197, 2308
AlwI	GGATC	4 cut(s)	311, 1826, 2171, 2368
AlwNI	CAGNNNCTG	2 cut(s)	312, 680
Ama87I	CYCGRG	1 cut(s)	1981
AoxI	GGCC	5 cut(s)	883, 1605, 1880, 2225, 2444
ApeKI	GCWGC	6 cut(s)	81, 674, 1143, 1480, 1522, 1525
ApoI	RAATTY	5 cut(s)	496, 586, 685, 2350, 2533
AsiGI	ACCGGT	1 cut(s)	560
Asp700I	GAANNNNTTC	4 cut(s)	11, 588, 708, 1011
AspLEI	GCGC	2 cut(s)	28, 41
AspS9I	GGNCC	5 cut(s)	632, 1880, 2225, 2456, 2504
AsuC2I	CCSGG	3 cut(s)	65, 131, 2427
AsuHPI	GGTGA	1 cut(s)	993
AsuNHI	GCTAGC	2 cut(s)	1805, 2150
AvaI	CYCGRG	1 cut(s)	1981
AvaII	GGWCC	3 cut(s)	632, 2456, 2504
BaeI	ACNNNNGTAYC	2 cut(s)	798, 831
BalI	TGGCCA	1 cut(s)	2446
BanI	GGYRCC	2 cut(s)	25, 1076
BanII	GRGCYC	3 cut(s)	1050, 1695, 2040
BarI	GAAGNNNNNNTAC	2 cut(s)	1482, 1514
BauI	CACGAG	2 cut(s)	122, 2399
BbsI	GAAGAC	2 cut(s)	711, 2381
Bbv12I	GWGCWC	4 cut(s)	1050, 1653, 1695, 2040
BbvI	GCAGC	6 cut(s)	68, 686, 1130, 1467, 1509, 1512
BceAI	ACGGC	1 cut(s)	2458
BcgI	CGANNNNNNTGC	6 cut(s)	1276, 1310, 1913, 1947, 2258, 2292
BciT130I	CCWGG	6 cut(s)	782, 1862, 1912, 2207, 2257, 2357
BclI	TGATCA	2 cut(s)	324, 1108
BcnI	CCSGG	3 cut(s)	65, 131, 2427
BcoDI	GTCTC	7 cut(s)	932, 987, 1238, 1852, 1963, 2197, 2308
BfaI	CTAG	7 cut(s)	377, 1680, 1806, 1821, 2025, 2151, 2166
BfmI	CTRYAG	1 cut(s)	1481
BfoI	RGCGCY	1 cut(s)	29
BfuAI	ACCTGC	2 cut(s)	1730, 2075
BglII	AGATCT	3 cut(s)	846, 1853, 2198
BisI	GCNGC	6 cut(s)	82, 675, 1144, 1481, 1523, 1526
BlsI	GCNGC	6 cut(s)	83, 676, 1145, 1482, 1524, 1527
Bme1390I	CCNGG	9 cut(s)	65, 131, 782, 1862, 1912, 2207, 2257, 2357, 2427
Bme18I	GGWCC	3 cut(s)	632, 2456, 2504
BmeT110I	CYCGRG	1 cut(s)	1981
BmgBI	CACGTC	1 cut(s)	2379
BmgT120I	GGNCC	5 cut(s)	632, 1880, 2225, 2456, 2504
BmiI	GGNNCC	3 cut(s)	27, 1078, 2326
BmrFI	CCNGG	9 cut(s)	65, 131, 782, 1862, 1912, 2207, 2257, 2357, 2427
BmrI	ACTGGG	1 cut(s)	889
BmsI	GCATC	6 cut(s)	686, 1179, 1300, 1345, 2447, 2506
BmtI	GCTAGC	2 cut(s)	1809, 2154
BmuI	ACTGGG	1 cut(s)	889
BpiI	GAAGAC	2 cut(s)	711, 2381
BpmI	CTGGAG	4 cut(s)	698, 1679, 2024, 2311
BpuEI	CTTGAG	7 cut(s)	614, 1046, 1562, 1834, 1987, 2179, 2332
BpuMI	CCSGG	3 cut(s)	65, 131, 2427
BsaBI	GATNNNNATC	2 cut(s)	308, 384
BsaHI	GRCGYC	1 cut(s)	26
BsaI	GGTCTC	2 cut(s)	1852, 2197
BsaJI	CCNNGG	9 cut(s)	780, 1065, 1836, 1861, 2181, 2206, 2356, 2426, 2528
BsaWI	WCCGGW	2 cut(s)	560, 1639
BsaXI	ACNNNNNCTCC	5 cut(s)	26, 1682, 1712, 2027, 2057
Bsc4I	CCNNNNNNNGG	8 cut(s)	22, 721, 1171, 1821, 1878, 2166, 2223, 2453
Bse118I	RCCGGY	1 cut(s)	560
Bse1I	ACTGG	5 cut(s)	895, 1696, 2041, 2447, 2506
Bse3DI	GCAATG	2 cut(s)	1726, 2071
Bse8I	GATNNNNATC	2 cut(s)	308, 384
BseBI	CCWGG	6 cut(s)	782, 1862, 1912, 2207, 2257, 2357
BseDI	CCNNGG	9 cut(s)	780, 1065, 1836, 1861, 2181, 2206, 2356, 2426, 2528
BseJI	GATNNNNATC	2 cut(s)	308, 384
BseLI	CCNNNNNNNGG	8 cut(s)	22, 721, 1171, 1821, 1878, 2166, 2223, 2453
BseMI	GCAATG	2 cut(s)	1726, 2071
BseMII	CTCAG	6 cut(s)	816, 928, 990, 1649, 1994, 2381
BseNI	ACTGG	5 cut(s)	895, 1696, 2041, 2447, 2506
BseRI	GAGGAG	1 cut(s)	554
BseXI	GCAGC	6 cut(s)	68, 686, 1130, 1467, 1509, 1512
BseYI	CCCAGC	4 cut(s)	71, 600, 1877, 2222
BsgI	GTGCAG	2 cut(s)	1953, 2298
BshFI	GGCC	5 cut(s)	885, 1607, 1882, 2227, 2446
BshNI	GGYRCC	2 cut(s)	25, 1076
BshTI	ACCGGT	1 cut(s)	560
BsiHKAI	GWGCWC	4 cut(s)	1050, 1653, 1695, 2040
BsiHKCI	CYCGRG	1 cut(s)	1981
BsiSI	CCGG	5 cut(s)	64, 130, 561, 1640, 2426
BslFI	GGGAC	4 cut(s)	1727, 1797, 2072, 2142
BslI	CCNNNNNNNGG	8 cut(s)	22, 721, 1171, 1821, 1878, 2166, 2223, 2453
BsmAI	GTCTC	7 cut(s)	932, 987, 1238, 1852, 1963, 2197, 2308
BsmBI	CGTCTC	1 cut(s)	1238
BsmFI	GGGAC	4 cut(s)	1727, 1797, 2072, 2142
BsmI	GAATGC	2 cut(s)	1145, 1166
BsnI	GGCC	5 cut(s)	885, 1607, 1882, 2227, 2446
Bso31I	GGTCTC	2 cut(s)	1852, 2197
BsoBI	CYCGRG	1 cut(s)	1981
Bsp1286I	GDGCHC	4 cut(s)	1050, 1653, 1695, 2040
Bsp19I	CCATGG	1 cut(s)	1065
BspACI	CCGC	4 cut(s)	217, 1455, 1900, 2245
BspANI	GGCC	5 cut(s)	885, 1607, 1882, 2227, 2446
BspCNI	CTCAG	6 cut(s)	815, 927, 989, 1650, 1995, 2382
BspLI	GGNNCC	3 cut(s)	27, 1078, 2326
BspMAI	CTGCAG	1 cut(s)	1485
BspMI	ACCTGC	2 cut(s)	1730, 2075
BspOI	GCTAGC	2 cut(s)	1809, 2154
BspPI	GGATC	4 cut(s)	311, 1826, 2171, 2368
BspQI	GCTCTTC	2 cut(s)	283, 1550
BspT107I	GGYRCC	2 cut(s)	25, 1076
BspTNI	GGTCTC	2 cut(s)	1852, 2197
BsrDI	GCAATG	2 cut(s)	1726, 2071
BsrFI	RCCGGY	1 cut(s)	560
BsrI	ACTGG	5 cut(s)	895, 1696, 2041, 2447, 2506
BssAI	RCCGGY	1 cut(s)	560
BssECI	CCNNGG	9 cut(s)	780, 1065, 1836, 1861, 2181, 2206, 2356, 2426, 2528
BssNAI	GTATAC	1 cut(s)	787
BssNI	GRCGYC	1 cut(s)	26
BssSI	CACGAG	2 cut(s)	122, 2399
BssT1I	CCWWGG	4 cut(s)	1065, 1836, 2181, 2528
Bst1107I	GTATAC	1 cut(s)	787
Bst2BI	CACGAG	2 cut(s)	122, 2399
Bst2UI	CCWGG	6 cut(s)	782, 1862, 1912, 2207, 2257, 2357
Bst4CI	ACNGT	5 cut(s)	22, 190, 247, 1351, 1489
Bst6I	CTCTTC	7 cut(s)	283, 531, 1131, 1356, 1550, 1781, 2126
BstACI	GRCGYC	1 cut(s)	26
BstC8I	GCNNGC	6 cut(s)	532, 1285, 1571, 1807, 2152, 2423
BstDEI	CTNAG	7 cut(s)	416, 802, 914, 976, 1658, 2003, 2390
BstDSI	CCRYGG	1 cut(s)	1065
BstENI	CCTNNNNNAGG	1 cut(s)	1169
BstH2I	RGCGCY	1 cut(s)	29
BstHHI	GCGC	2 cut(s)	28, 41
BstMAI	GTCTC	7 cut(s)	932, 987, 1238, 1852, 1963, 2197, 2308
BstMWI	GCNNNNNNNGC	3 cut(s)	95, 1016, 1566
BstNI	CCWGG	6 cut(s)	782, 1862, 1912, 2207, 2257, 2357
BstNSI	RCATGY	3 cut(s)	437, 520, 650
BstSCI	CCNGG	9 cut(s)	63, 129, 780, 1860, 1910, 2205, 2255, 2355, 2425
BstSFI	CTRYAG	1 cut(s)	1481
BstV1I	GCAGC	6 cut(s)	68, 686, 1130, 1467, 1509, 1512
BstV2I	GAAGAC	2 cut(s)	711, 2381
BstX2I	RGATCY	4 cut(s)	846, 1853, 2198, 2360
BstXI	CCANNNNNNTGG	2 cut(s)	1843, 2188
BstYI	RGATCY	4 cut(s)	846, 1853, 2198, 2360
BstZ17I	GTATAC	1 cut(s)	787
BsuRI	GGCC	5 cut(s)	885, 1607, 1882, 2227, 2446
BtgI	CCRYGG	1 cut(s)	1065
BtrI	CACGTC	1 cut(s)	2379
BtsIMutI	CAGTG	7 cut(s)	334, 377, 460, 1769, 1827, 2114, 2172
BveI	ACCTGC	2 cut(s)	1730, 2075
Cac8I	GCNNGC	6 cut(s)	532, 1285, 1571, 1807, 2152, 2423
CaiI	CAGNNNCTG	2 cut(s)	312, 680
CfoI	GCGC	2 cut(s)	28, 41
Cfr10I	RCCGGY	1 cut(s)	560
Cfr13I	GGNCC	5 cut(s)	632, 1880, 2225, 2456, 2504
CsiI	ACCWGGT	2 cut(s)	1910, 2255
Csp6I	GTAC	9 cut(s)	514, 650, 1699, 1732, 1743, 2044, 2077, 2088, 2396
CspAI	ACCGGT	1 cut(s)	560
CviQI	GTAC	9 cut(s)	514, 650, 1699, 1732, 1743, 2044, 2077, 2088, 2396
DdeI	CTNAG	7 cut(s)	416, 802, 914, 976, 1658, 2003, 2390
DinI	GGCGCC	1 cut(s)	27
DraIII	CACNNNGTG	2 cut(s)	1914, 2259
EaeI	YGGCCR	1 cut(s)	2444
Eam1104I	CTCTTC	7 cut(s)	283, 531, 1131, 1356, 1550, 1781, 2126
EarI	CTCTTC	7 cut(s)	283, 531, 1131, 1356, 1550, 1781, 2126
EciI	GGCGGA	2 cut(s)	1915, 2260
Ecl136II	GAGCTC	3 cut(s)	1048, 1693, 2038
Eco130I	CCWWGG	4 cut(s)	1065, 1836, 2181, 2528
Eco24I	GRGCYC	3 cut(s)	1050, 1695, 2040
Eco31I	GGTCTC	2 cut(s)	1852, 2197
Eco47I	GGWCC	3 cut(s)	632, 2456, 2504
Eco53kI	GAGCTC	3 cut(s)	1048, 1693, 2038
Eco57I	CTGAAG	1 cut(s)	1380
Eco88I	CYCGRG	1 cut(s)	1981
EcoICRI	GAGCTC	3 cut(s)	1048, 1693, 2038
EcoNI	CCTNNNNNAGG	1 cut(s)	1169
EcoRII	CCWGG	6 cut(s)	780, 1860, 1910, 2205, 2255, 2355
EcoT14I	CCWWGG	4 cut(s)	1065, 1836, 2181, 2528
EcoT22I	ATGCAT	1 cut(s)	522
EcoT38I	GRGCYC	3 cut(s)	1050, 1695, 2040
EgeI	GGCGCC	1 cut(s)	27
EheI	GGCGCC	1 cut(s)	27
ErhI	CCWWGG	4 cut(s)	1065, 1836, 2181, 2528
Esp3I	CGTCTC	1 cut(s)	1238
FalI	AAGNNNNNCTT	4 cut(s)	334, 366, 1008, 1040
FaqI	GGGAC	4 cut(s)	1727, 1797, 2072, 2142
FauNDI	CATATG	5 cut(s)	1575, 1703, 1750, 2048, 2095
FbaI	TGATCA	2 cut(s)	324, 1108
FblI	GTMKAC	3 cut(s)	786, 1923, 2268
Fnu4HI	GCNGC	6 cut(s)	82, 675, 1144, 1481, 1523, 1526
FriOI	GRGCYC	3 cut(s)	1050, 1695, 2040
Fsp4HI	GCNGC	6 cut(s)	82, 675, 1144, 1481, 1523, 1526
FspBI	CTAG	7 cut(s)	377, 1680, 1806, 1821, 2025, 2151, 2166
GlaI	GCGC	2 cut(s)	27, 40
GluI	GCNGC	6 cut(s)	82, 675, 1144, 1481, 1523, 1526
GsaI	CCCAGC	4 cut(s)	75, 604, 1881, 2226
GsuI	CTGGAG	4 cut(s)	698, 1679, 2024, 2311
HaeII	RGCGCY	1 cut(s)	29
HaeIII	GGCC	5 cut(s)	885, 1607, 1882, 2227, 2446
HapII	CCGG	5 cut(s)	64, 130, 561, 1640, 2426
HhaI	GCGC	2 cut(s)	28, 41
Hin1I	GRCGYC	1 cut(s)	26
Hin6I	GCGC	2 cut(s)	26, 39
HinP1I	GCGC	2 cut(s)	26, 39
HincII	GTYRAC	3 cut(s)	1223, 1924, 2269
HindII	GTYRAC	3 cut(s)	1223, 1924, 2269
HindIII	AAGCTT	1 cut(s)	1017
HpaII	CCGG	5 cut(s)	64, 130, 561, 1640, 2426
HphI	GGTGA	1 cut(s)	993
Hpy166II	GTNNAC	9 cut(s)	787, 948, 1223, 1827, 1924, 2172, 2269, 2382, 2398
Hpy188III	TCNNGA	8 cut(s)	593, 635, 1136, 1340, 1851, 2196, 2328, 2366
Hpy8I	GTNNAC	9 cut(s)	787, 948, 1223, 1827, 1924, 2172, 2269, 2382, 2398
HpyAV	CCTTC	9 cut(s)	719, 749, 875, 1360, 1508, 1827, 1882, 2172, 2227
HpyCH4III	ACNGT	5 cut(s)	22, 190, 247, 1351, 1489
HpyCH4IV	ACGT	2 cut(s)	138, 2378
HpyF10VI	GCNNNNNNNGC	3 cut(s)	95, 1016, 1566
HpyF3I	CTNAG	7 cut(s)	416, 802, 914, 976, 1658, 2003, 2390
HpySE526I	ACGT	2 cut(s)	138, 2378
Hsp92I	GRCGYC	1 cut(s)	26
HspAI	GCGC	2 cut(s)	26, 39
KasI	GGCGCC	1 cut(s)	25
Ksp22I	TGATCA	2 cut(s)	324, 1108
LguI	GCTCTTC	2 cut(s)	283, 1550
LmnI	GCTCC	7 cut(s)	604, 1045, 1690, 1698, 2035, 2043, 2330
Lsp1109I	GCAGC	6 cut(s)	68, 686, 1130, 1467, 1509, 1512
LweI	GCATC	6 cut(s)	686, 1179, 1300, 1345, 2447, 2506
MabI	ACCWGGT	2 cut(s)	1910, 2255
MaeI	CTAG	7 cut(s)	377, 1680, 1806, 1821, 2025, 2151, 2166
MaeII	ACGT	2 cut(s)	138, 2378
MaeIII	GTNAC	6 cut(s)	115, 1083, 1120, 1351, 1548, 2449
MfeI	CAATTG	2 cut(s)	391, 1612
MflI	RGATCY	4 cut(s)	846, 1853, 2198, 2360
MhlI	GDGCHC	4 cut(s)	1050, 1653, 1695, 2040
MlsI	TGGCCA	1 cut(s)	2446
MluNI	TGGCCA	1 cut(s)	2446
Mly113I	GGCGCC	1 cut(s)	26
MlyI	GAGTC	6 cut(s)	886, 934, 1128, 1169, 1734, 2079
MmeI	TCCRAC	3 cut(s)	1114, 1690, 2035
Mox20I	TGGCCA	1 cut(s)	2446
Mph1103I	ATGCAT	1 cut(s)	522
MroXI	GAANNNNTTC	4 cut(s)	11, 588, 708, 1011
MscI	TGGCCA	1 cut(s)	2446
MseI	TTAA	6 cut(s)	467, 1385, 1587, 1770, 1992, 2115
MslI	CAYNNNNRTG	3 cut(s)	111, 122, 2403
Msp20I	TGGCCA	1 cut(s)	2446
MspA1I	CMGCKG	2 cut(s)	1945, 2290
MspI	CCGG	5 cut(s)	64, 130, 561, 1640, 2426
MspR9I	CCNGG	9 cut(s)	65, 131, 782, 1862, 1912, 2207, 2257, 2357, 2427
MunI	CAATTG	2 cut(s)	391, 1612
Mva1269I	GAATGC	2 cut(s)	1145, 1166
MvaI	CCWGG	6 cut(s)	782, 1862, 1912, 2207, 2257, 2357
MwoI	GCNNNNNNNGC	3 cut(s)	95, 1016, 1566
NarI	GGCGCC	1 cut(s)	26
NciI	CCSGG	3 cut(s)	65, 131, 2427
NcoI	CCATGG	1 cut(s)	1065
NdeI	CATATG	5 cut(s)	1575, 1703, 1750, 2048, 2095
NheI	GCTAGC	2 cut(s)	1805, 2150
NlaIV	GGNNCC	3 cut(s)	27, 1078, 2326
NmuCI	GTSAC	2 cut(s)	115, 1120
NsiI	ATGCAT	1 cut(s)	522
NspI	RCATGY	3 cut(s)	437, 520, 650
OliI	CACNNNNGTG	1 cut(s)	122
PaeR7I	CTCGAG	1 cut(s)	1981
PciI	ACATGT	1 cut(s)	433
PciSI	GCTCTTC	2 cut(s)	283, 1550
PctI	GAATGC	2 cut(s)	1145, 1166
PdmI	GAANNNNTTC	4 cut(s)	11, 588, 708, 1011
PfeI	GAWTC	6 cut(s)	358, 380, 1070, 1662, 2007, 2481
PflFI	GACNNNGTC	1 cut(s)	1178
PfoI	TCCNGGA	2 cut(s)	63, 129
PinAI	ACCGGT	1 cut(s)	560
PkrI	GCNGC	6 cut(s)	83, 676, 1145, 1482, 1524, 1527
PleI	GAGTC	6 cut(s)	885, 933, 1127, 1169, 1733, 2078
PluTI	GGCGCC	1 cut(s)	29
PpsI	GAGTC	6 cut(s)	885, 933, 1127, 1169, 1733, 2078
PscI	ACATGT	1 cut(s)	433
PsiI	TTATAA	2 cut(s)	1686, 2031
Psp124BI	GAGCTC	3 cut(s)	1050, 1695, 2040
Psp6I	CCWGG	6 cut(s)	780, 1860, 1910, 2205, 2255, 2355
PspFI	CCCAGC	4 cut(s)	71, 600, 1877, 2222
PspGI	CCWGG	6 cut(s)	780, 1860, 1910, 2205, 2255, 2355
PspN4I	GGNNCC	3 cut(s)	27, 1078, 2326
PspPI	GGNCC	5 cut(s)	632, 1880, 2225, 2456, 2504
PspXI	VCTCGAGB	1 cut(s)	1981
PstI	CTGCAG	1 cut(s)	1485
PstNI	CAGNNNCTG	2 cut(s)	312, 680
PsuI	RGATCY	4 cut(s)	846, 1853, 2198, 2360
PsyI	GACNNNGTC	1 cut(s)	1178
PvuII	CAGCTG	2 cut(s)	1945, 2290
RsaI	GTAC	9 cut(s)	515, 651, 1700, 1733, 1744, 2045, 2078, 2089, 2397
RsaNI	GTAC	9 cut(s)	514, 650, 1699, 1732, 1743, 2044, 2077, 2088, 2396
RseI	CAYNNNNRTG	3 cut(s)	111, 122, 2403
SacI	GAGCTC	3 cut(s)	1050, 1695, 2040
SalI	GTCGAC	2 cut(s)	1922, 2267
SapI	GCTCTTC	2 cut(s)	283, 1550
SaqAI	TTAA	6 cut(s)	467, 1385, 1587, 1770, 1992, 2115
SatI	GCNGC	6 cut(s)	82, 675, 1144, 1481, 1523, 1526
Sau96I	GGNCC	5 cut(s)	632, 1880, 2225, 2456, 2504
SchI	GAGTC	6 cut(s)	886, 934, 1128, 1169, 1734, 2079
ScrFI	CCNGG	9 cut(s)	65, 131, 782, 1862, 1912, 2207, 2257, 2357, 2427
SduI	GDGCHC	4 cut(s)	1050, 1653, 1695, 2040
SexAI	ACCWGGT	2 cut(s)	1910, 2255
SfaNI	GCATC	6 cut(s)	686, 1179, 1300, 1345, 2447, 2506
SfcI	CTRYAG	1 cut(s)	1481
SfoI	GGCGCC	1 cut(s)	27
Sfr274I	CTCGAG	1 cut(s)	1981
SinI	GGWCC	3 cut(s)	632, 2456, 2504
SlaI	CTCGAG	1 cut(s)	1981
SmiMI	CAYNNNNRTG	3 cut(s)	111, 122, 2403
SmlI	CTYRAG	8 cut(s)	593, 1025, 1541, 1849, 1966, 1981, 2194, 2311
SmoI	CTYRAG	8 cut(s)	593, 1025, 1541, 1849, 1966, 1981, 2194, 2311
SsiI	CCGC	4 cut(s)	217, 1455, 1900, 2245
SspDI	GGCGCC	1 cut(s)	25
SspMI	CTAG	7 cut(s)	377, 1680, 1806, 1821, 2025, 2151, 2166
SstI	GAGCTC	3 cut(s)	1050, 1695, 2040
StyD4I	CCNGG	9 cut(s)	63, 129, 780, 1860, 1910, 2205, 2255, 2355, 2425
StyI	CCWWGG	4 cut(s)	1065, 1836, 2181, 2528
TaaI	ACNGT	5 cut(s)	22, 190, 247, 1351, 1489
TaiI	ACGT	2 cut(s)	141, 2381
TaqI	TCGA	7 cut(s)	33, 775, 1513, 1620, 1923, 1982, 2268
TaqII	GACCGA	1 cut(s)	1168
TatI	WGTACW	6 cut(s)	513, 1698, 1731, 2043, 2076, 2395
TfiI	GAWTC	6 cut(s)	358, 380, 1070, 1662, 2007, 2481
Tru1I	TTAA	6 cut(s)	467, 1385, 1587, 1770, 1992, 2115
Tru9I	TTAA	6 cut(s)	467, 1385, 1587, 1770, 1992, 2115
TscAI	CASTG	7 cut(s)	334, 377, 460, 1769, 1834, 2114, 2179
TseFI	GTSAC	2 cut(s)	115, 1120
TseI	GCWGC	6 cut(s)	81, 674, 1143, 1480, 1522, 1525
Tsp45I	GTSAC	2 cut(s)	115, 1120
TspDTI	ATGAA	4 cut(s)	567, 1021, 1121, 1194
TspRI	CASTG	7 cut(s)	334, 377, 460, 1769, 1834, 2114, 2179
Tth111I	GACNNNGTC	1 cut(s)	1178
VpaK11BI	GGWCC	3 cut(s)	632, 2456, 2504
XagI	CCTNNNNNAGG	1 cut(s)	1169
XapI	RAATTY	5 cut(s)	496, 586, 685, 2350, 2533
XceI	RCATGY	3 cut(s)	437, 520, 650
XhoI	CTCGAG	1 cut(s)	1981
XmiI	GTMKAC	3 cut(s)	786, 1923, 2268
XmnI	GAANNNNTTC	4 cut(s)	11, 588, 708, 1011
XspI	CTAG	7 cut(s)	377, 1680, 1806, 1821, 2025, 2151, 2166
Zsp2I	ATGCAT	1 cut(s)	522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.