Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0007715

Physical Location & Seq

Genomic Coordinates Forward (+)

24089106 .. 24093234

Gene Structure 4129 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000012939

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2352 bp

ATGGGCGGTCTCCACTGTAAATGGCGGTTCCCCAACACCCGCTTTAACCGTCATTTGTGTCGTCTACCCTCCTCTCCGCCATTTCCACCATTCTCAACAAACATTTCACTACTATTCTCTTCATTATCACAACCCAAAATCACCACCAACGACAGAACTGCTGGTGTTGGGTGCACAACCACAAACAGTACTAGAAGTAGAGTTGTTAGTCTCAGACCTCTGTTCTCTCTCCCTCAAAATCAACAAACCCAACAAGTACAAGGAGACAATTTTCCAAACAATGATGAAGAAGAAGAAGAAGATGAGGACACCTCCCAAGGCCGTGGCAATGGGAACTGGACAATAGTACTTTCATCCAGCTTGGTTGGTCTCCTCACCGGCCTCGGTGTCGTTCTCTTCAACTACTCAGTGCATGAGATAAGAGAGGTGTTTTGGGATGGGATACCTCAAAGAGGAGCTTCATGGCTGAGAGAGGAGCCCATTACTGATATGTGGCAAAGAGTGATTCTGGTTCCGGCTTCCGGGGGTTTGATTGTGGCCATTTTGAATGTGCTTAGAGGTGCATTGGATGAGGAACAGGGACAAGAAAATGAAGAAGAAGAGAATGTATTGGTGAAAATGGGAATGCCCGTTTCGGTTTTTGATAGCTTGAAGGCTGCGTCACGTCCATTTCTTAAGGCTGTTGCTGCTTGTGTCACTCTGGGAACTGGGAATTCTTTAGGTCCGGAAGGGCCTAGTGTTGAGATTGGGACTTCCATTGCCAGAGGTGTAGGTGCTGTGTTTGATAGAAGTTCGCAGAGAAAGCTCTCCCTTGTGGCTGCTGGATCAGCTGCTGGAATTGCTTCTGGATTCAATGCTGCTGTTTCGGGATGCTTCTTTGCGGTAGAGTCAGTCCTATGGCCATCACCAGCGGATTCTTCTTCTTCATCTGTTTCGCTGACAAATACCACTTCTATGGTCATTCTCAGTGCAGTGATAGCTTCTGTTATTACACAAGTTGGTCTTGGTTCTGAACCAGCATTCAAGGTCCCAGGCTATGACTTCCGCTCACCTAGTGAGCTACCACTGTATCTACTTCTGGGAATTTTATGTGGCTTGGTTTCGTTAACCTTTTCCAAGTGCACATCATACATGTTGTTATTCGTTGACAATCTTCAGAACGCCACTGCCCTGCCAAGAAGTTCATTTCCTATACTAGGAGGCTTAGCAGTCGGGCTTATAGCATTGGCATATCCTGAAATCCTTTATTGGGGATTTGAGAATGTTGACATTTTGCTAGAATCTCGACCATTTGTGAAAGGCCTCTCAGCTGATCTCTTGGTTCAGCTGGTAGTGGTTAAGATAGGTGCAACCTCTTTGTGCCGCGCCTCTGGGTTAGTTGGAGGCTACTATGCTCCATCACTCTTCATTGGTGCAGCAACAGGAATGGCATATGGGAAATTCATTGGCTCCGCAGTTGCTCAGTCCAATCCCATACTTCACCTCTCCTACTTGGAAGTAGCATCACCACAAGCATATGGACTGGTTGGAATGGCTGCTACTCTGGCAGGAGTGTGCCAGGTACCTCTTACGGCAGTGCTGCTGCTTTTTGAATTGACACAAGATTATCGAATTGTTCTACCACTGCTTGGAGCTGTAGGGTTATCTTCATGGGTTACATCTGGACAGACAAGAAGAAAAGATGCCTCAAAGAGTAAAACACTGTTACAGGGAAAGACTAGTGGCATTCAACAACCTGAAGTACGTTTCGCTAGTGTGAGTGGGCTATCTTCTAGAAAAGGCTTCACCGAAAGCGCATCTAACATGAGTGACCTTTGTGAAATGGAAAGCTCACTCTGCATAGATGATTTTGATATTGATACAGAAAAGTTAGAAAAGAAAATACTCGTTTCAGAAGCCATGAGAACAAGATATGTGACTGTTTTGATGAACACTTTGCTTACAGAAGCAGTGGCTTTAATGCTTGCAGAAAAGCAGCCCTGTGCCATGATTGTTGATAGTGATCAGATTCTAATTGGTTTACTGACACTGGAAGACATTCAAAAGTTCAGCAATAAATACGCAAAATCAAGAAGACAACAACCCAAGAAACTCATAGTATGTGAAATGTGTTCTTCTGATGGGGAAGTATGCAAAGTACCATGGACTGCTACACCCAGATCAGAGAGGGCACCTAGTTGGCCTCTTAGACAGAGAGTGTATAAGCCTAACTTGCAGAGCTCTAGCAACCAGAGAATCCCTCTGCTAGTCATCAACCCTAGATGGCATATTTTGTGTAGGCATCCACCTGGTTGCTGCTTCAGAGCACCTCAGTCCACACAAGTCTTCCATTTGGCTTTCGATTGCGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0016020

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBS Voltage_CLC

Protein Analysis

784

Amino Acids

84.63

Weight (kDa)

6.69

Isoelectric Point (pI)

49.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Voltage_CLC	PF00654	221 - 553	5e-71	Voltage gated chloride channel
CBS	PF00571	630 - 683	2.6e-06	CBS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007715)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35440 AT4G35440
fragaria_vesca	FvH4_2g17250 FvH4_2g17250 FvH4_2g17250 FvH4_2g17250 FvH4_2g17250
malus_domestica	MD10G1145500.v1.1
prunus_persica	Prupe.8G183800_v2.0.a1 Prupe.8G183800_v2.0.a1 Prupe.8G183800_v2.0.a1
pyrus_communis	pycom10g12560
rosa_chinensis	RchiOBHm_Chr6g0281741
rosa_laevigata	RLG00000012939
rosa_multiflora	Rmu_sc0008470.1_g000002 Rmu_ssc0000126.1_g000061 Rmu_ssc0000126.1_g000062
rosa_roxburghii	Rroxscaffold_7G00186860
rosa_rugosa	Rorug06G0143500
rosa_samantha	Rh6AG255900 Rh6BG259000 Rh6CG257900 Rh6DG250000
rosa_wichuraiana	Rw6G022180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1561
AccB1I	GGYRCC	2 cut(s)	1561, 2170
AccB7I	CCANNNNNTGG	1 cut(s)	1628
AccBSI	CCGCTC	1 cut(s)	1047
AccI	GTMKAC	1 cut(s)	64
AccII	CGCG	1 cut(s)	1365
AccIII	TCCGGA	1 cut(s)	724
AciI	CCGC	9 cut(s)	6, 25, 40, 77, 881, 911, 1045, 1363, 1452
AclWI	GGATC	1 cut(s)	832
AcoI	YGGCCR	2 cut(s)	537, 899
AcsI	RAATTY	3 cut(s)	712, 1083, 1439
AcuI	CTGAAG	3 cut(s)	1139, 1758, 2284
AdeI	CACNNNGTG	1 cut(s)	1055
AfaI	GTAC	6 cut(s)	190, 258, 348, 1563, 1743, 2139
AfiI	CCNNNNNNNGG	5 cut(s)	452, 521, 1196, 1249, 1628
AflII	CTTAAG	1 cut(s)	674
AflIII	ACRYGT	1 cut(s)	1131
AgsI	TTSAA	8 cut(s)	400, 547, 652, 853, 1024, 1592, 1730, 2042
AhlI	ACTAGT	1 cut(s)	1718
AjiI	CACGTC	1 cut(s)	665
AjnI	CCWGG	3 cut(s)	1030, 1557, 2287
Alw21I	GWGCWC	4 cut(s)	176, 1124, 2222, 2308
Alw26I	GTCTC	4 cut(s)	14, 215, 258, 374
Alw44I	GTGCAC	2 cut(s)	172, 1120
AlwI	GGATC	1 cut(s)	832
AlwNI	CAGNNNCTG	1 cut(s)	833
Aor13HI	TCCGGA	1 cut(s)	724
AoxI	GGCC	7 cut(s)	319, 379, 537, 731, 899, 1300, 2180
ApaLI	GTGCAC	2 cut(s)	172, 1120
ApoI	RAATTY	3 cut(s)	712, 1083, 1439
Asp700I	GAANNNNTTC	2 cut(s)	841, 2037
Asp718I	GGTACC	1 cut(s)	1561
AspLEI	GCGC	2 cut(s)	1367, 1796
AspS9I	GGNCC	3 cut(s)	722, 731, 1027
AsuC2I	CCSGG	1 cut(s)	523
AsuHPI	GGTGA	8 cut(s)	133, 367, 625, 897, 1041, 1472, 1497, 1777
AvaII	GGWCC	2 cut(s)	722, 1027
BaeGI	GKGCMC	3 cut(s)	176, 1124, 2173
BaeI	ACNNNNGTAYC	2 cut(s)	1052, 1085
BalI	TGGCCA	2 cut(s)	539, 901
BanI	GGYRCC	2 cut(s)	1561, 2170
BanII	GRGCYC	2 cut(s)	480, 2222
BbsI	GAAGAC	3 cut(s)	2040, 2080, 2317
Bbv12I	GWGCWC	4 cut(s)	176, 1124, 2222, 2308
BccI	CCATC	5 cut(s)	431, 910, 1405, 2114, 2256
BceAI	ACGGC	2 cut(s)	306, 1587
BcgI	CGANNNNNNTGC	2 cut(s)	140, 174
BciT130I	CCWGG	3 cut(s)	1032, 1559, 2289
BciVI	GTATCC	1 cut(s)	435
BclI	TGATCA	1 cut(s)	2002
BcnI	CCSGG	1 cut(s)	523
BcoDI	GTCTC	4 cut(s)	14, 215, 258, 374
BcuI	ACTAGT	1 cut(s)	1718
BfmI	CTRYAG	1 cut(s)	1635
BfrI	CTTAAG	1 cut(s)	674
BfuI	GTATCC	1 cut(s)	435
BlpI	GCTNAGC	1 cut(s)	1204
BmcAI	AGTACT	2 cut(s)	190, 348
Bme1390I	CCNGG	4 cut(s)	523, 1032, 1559, 2289
Bme18I	GGWCC	2 cut(s)	722, 1027
BmgBI	CACGTC	1 cut(s)	665
BmgT120I	GGNCC	3 cut(s)	722, 731, 1027
BmiI	GGNNCC	7 cut(s)	29, 477, 513, 1029, 1450, 1563, 2172
BmrFI	CCNGG	4 cut(s)	523, 1032, 1559, 2289
BmrI	ACTGGG	1 cut(s)	717
BmsI	GCATC	5 cut(s)	860, 1511, 1672, 1805, 2290
BmuI	ACTGGG	1 cut(s)	717
BpiI	GAAGAC	3 cut(s)	2040, 2080, 2317
BplI	GAGNNNNNCTC	4 cut(s)	296, 328, 2224, 2256
Bpu1102I	GCTNAGC	1 cut(s)	1204
BpuMI	CCSGG	1 cut(s)	523
BsaBI	GATNNNNATC	1 cut(s)	2001
BsaI	GGTCTC	2 cut(s)	14, 374
BsaJI	CCNNGG	6 cut(s)	316, 322, 382, 522, 1030, 2141
BsaWI	WCCGGW	1 cut(s)	724
Bsc4I	CCNNNNNNNGG	5 cut(s)	452, 521, 1196, 1249, 1628
Bse118I	RCCGGY	1 cut(s)	377
Bse1I	ACTGG	4 cut(s)	341, 712, 1527, 2034
Bse3DI	GCAATG	2 cut(s)	334, 756
Bse8I	GATNNNNATC	1 cut(s)	2001
BseAI	TCCGGA	1 cut(s)	724
BseBI	CCWGG	3 cut(s)	1032, 1559, 2289
BseDI	CCNNGG	6 cut(s)	316, 322, 382, 522, 1030, 2141
BseGI	GGATG	5 cut(s)	353, 442, 574, 875, 2281
BseJI	GATNNNNATC	1 cut(s)	2001
BseLI	CCNNNNNNNGG	5 cut(s)	452, 521, 1196, 1249, 1628
BseMI	GCAATG	2 cut(s)	334, 756
BseMII	CTCAG	7 cut(s)	226, 420, 458, 979, 1320, 1475, 2324
BseNI	ACTGG	4 cut(s)	341, 712, 1527, 2034
BseRI	GAGGAG	4 cut(s)	61, 362, 468, 488
BseSI	GKGCMC	3 cut(s)	176, 1124, 2173
BsgI	GTGCAG	2 cut(s)	990, 1434
Bsh1236I	CGCG	1 cut(s)	1365
BshFI	GGCC	7 cut(s)	321, 381, 539, 733, 901, 1302, 2182
BshNI	GGYRCC	2 cut(s)	1561, 2170
BsiHKAI	GWGCWC	4 cut(s)	176, 1124, 2222, 2308
BsiSI	CCGG	4 cut(s)	378, 515, 522, 725
BslFI	GGGAC	3 cut(s)	594, 763, 1013
BslI	CCNNNNNNNGG	5 cut(s)	452, 521, 1196, 1249, 1628
BsmAI	GTCTC	4 cut(s)	14, 215, 258, 374
BsmFI	GGGAC	3 cut(s)	594, 763, 1013
BsmI	GAATGC	3 cut(s)	630, 1019, 1725
BsnI	GGCC	7 cut(s)	321, 381, 539, 733, 901, 1302, 2182
Bso31I	GGTCTC	2 cut(s)	14, 374
Bsp1286I	GDGCHC	6 cut(s)	176, 480, 1124, 2173, 2222, 2308
Bsp13I	TCCGGA	1 cut(s)	724
Bsp143I	GATC	4 cut(s)	824, 1312, 2002, 2159
Bsp1720I	GCTNAGC	1 cut(s)	1204
Bsp19I	CCATGG	1 cut(s)	2141
BspACI	CCGC	9 cut(s)	6, 25, 40, 77, 881, 911, 1045, 1363, 1452
BspANI	GGCC	7 cut(s)	321, 381, 539, 733, 901, 1302, 2182
BspCNI	CTCAG	7 cut(s)	225, 419, 459, 978, 1319, 1474, 2323
BspEI	TCCGGA	1 cut(s)	724
BspFNI	CGCG	1 cut(s)	1365
BspLI	GGNNCC	7 cut(s)	29, 477, 513, 1029, 1450, 1563, 2172
BspPI	GGATC	1 cut(s)	832
BspT107I	GGYRCC	2 cut(s)	1561, 2170
BspTI	CTTAAG	1 cut(s)	674
BspTNI	GGTCTC	2 cut(s)	14, 374
BsrBI	CCGCTC	1 cut(s)	1047
BsrDI	GCAATG	2 cut(s)	334, 756
BsrFI	RCCGGY	1 cut(s)	377
BsrI	ACTGG	4 cut(s)	341, 712, 1527, 2034
BssAI	RCCGGY	1 cut(s)	377
BssECI	CCNNGG	6 cut(s)	316, 322, 382, 522, 1030, 2141
BssMI	GATC	4 cut(s)	824, 1312, 2002, 2159
BssT1I	CCWWGG	2 cut(s)	316, 2141
Bst2UI	CCWGG	3 cut(s)	1032, 1559, 2289
Bst4CI	ACNGT	6 cut(s)	17, 50, 188, 1068, 1704, 1921
Bst6I	CTCTTC	4 cut(s)	124, 401, 594, 1409
BstAFI	CTTAAG	1 cut(s)	674
BstC8I	GCNNGC	1 cut(s)	1965
BstDSI	CCRYGG	2 cut(s)	322, 2141
BstENI	CCTNNNNNAGG	2 cut(s)	450, 1194
BstF5I	GGATG	5 cut(s)	353, 442, 574, 875, 2281
BstFNI	CGCG	1 cut(s)	1365
BstHHI	GCGC	2 cut(s)	1367, 1796
BstKTI	GATC	4 cut(s)	827, 1315, 2005, 2162
BstMAI	GTCTC	4 cut(s)	14, 215, 258, 374
BstMBI	GATC	4 cut(s)	824, 1312, 2002, 2159
BstMWI	GCNNNNNNNGC	8 cut(s)	686, 802, 827, 839, 977, 1544, 1836, 2212
BstNI	CCWGG	3 cut(s)	1032, 1559, 2289
BstNSI	RCATGY	1 cut(s)	1135
BstSCI	CCNGG	4 cut(s)	521, 1030, 1557, 2287
BstSFI	CTRYAG	1 cut(s)	1635
BstSLI	GKGCMC	3 cut(s)	176, 1124, 2173
BstUI	CGCG	1 cut(s)	1365
BstV2I	GAAGAC	3 cut(s)	2040, 2080, 2317
BstXI	CCANNNNNNTGG	2 cut(s)	323, 955
BsuI	GTATCC	1 cut(s)	435
BsuRI	GGCC	7 cut(s)	321, 381, 539, 733, 901, 1302, 2182
BtgI	CCRYGG	2 cut(s)	322, 2141
BtrI	CACGTC	1 cut(s)	665
BtsCI	GGATG	5 cut(s)	353, 442, 574, 875, 2281
BtsI	GCAGTG	5 cut(s)	978, 1164, 1581, 1622, 1956
Cac8I	GCNNGC	1 cut(s)	1965
CaiI	CAGNNNCTG	1 cut(s)	833
CfoI	GCGC	2 cut(s)	1367, 1796
Cfr10I	RCCGGY	1 cut(s)	377
Cfr13I	GGNCC	3 cut(s)	722, 731, 1027
CseI	GACGC	1 cut(s)	648
CsiI	ACCWGGT	1 cut(s)	2287
Csp6I	GTAC	6 cut(s)	189, 257, 347, 1562, 1742, 2138
CviAII	CATG	8 cut(s)	413, 462, 1132, 1650, 1804, 1900, 1987, 2142
CviQI	GTAC	6 cut(s)	189, 257, 347, 1562, 1742, 2138
DpnI	GATC	4 cut(s)	826, 1314, 2004, 2161
DpnII	GATC	4 cut(s)	824, 1312, 2002, 2159
DraIII	CACNNNGTG	1 cut(s)	1055
EaeI	YGGCCR	2 cut(s)	537, 899
Eam1104I	CTCTTC	4 cut(s)	124, 401, 594, 1409
EarI	CTCTTC	4 cut(s)	124, 401, 594, 1409
EciI	GGCGGA	1 cut(s)	66
Ecl136II	GAGCTC	1 cut(s)	2220
Eco130I	CCWWGG	2 cut(s)	316, 2141
Eco147I	AGGCCT	1 cut(s)	1302
Eco24I	GRGCYC	2 cut(s)	480, 2222
Eco31I	GGTCTC	2 cut(s)	14, 374
Eco47I	GGWCC	2 cut(s)	722, 1027
Eco53kI	GAGCTC	1 cut(s)	2220
Eco57I	CTGAAG	3 cut(s)	1139, 1758, 2284
EcoICRI	GAGCTC	1 cut(s)	2220
EcoNI	CCTNNNNNAGG	2 cut(s)	450, 1194
EcoO109I	RGGNCCY	2 cut(s)	731, 1027
EcoRI	GAATTC	1 cut(s)	712
EcoRII	CCWGG	3 cut(s)	1030, 1557, 2287
EcoT14I	CCWWGG	2 cut(s)	316, 2141
EcoT38I	GRGCYC	2 cut(s)	480, 2222
ErhI	CCWWGG	2 cut(s)	316, 2141
FaeI	CATG	8 cut(s)	416, 465, 1135, 1653, 1807, 1903, 1990, 2145
FalI	AAGNNNNNCTT	6 cut(s)	442, 474, 987, 1019, 2195, 2227
FaqI	GGGAC	3 cut(s)	594, 763, 1013
FatI	CATG	8 cut(s)	412, 461, 1131, 1649, 1803, 1899, 1986, 2141
FauI	CCCGC	1 cut(s)	47
FauNDI	CATATG	2 cut(s)	1432, 1516
FbaI	TGATCA	1 cut(s)	2002
FblI	GTMKAC	1 cut(s)	64
FokI	GGATG	5 cut(s)	340, 449, 581, 882, 2268
FriOI	GRGCYC	2 cut(s)	480, 2222
GlaI	GCGC	2 cut(s)	1366, 1795
HaeIII	GGCC	7 cut(s)	321, 381, 539, 733, 901, 1302, 2182
HapII	CCGG	4 cut(s)	378, 515, 522, 725
HgaI	GACGC	1 cut(s)	648
HhaI	GCGC	2 cut(s)	1367, 1796
Hin1II	CATG	8 cut(s)	416, 465, 1135, 1653, 1807, 1903, 1990, 2145
Hin6I	GCGC	2 cut(s)	1365, 1794
HinP1I	GCGC	2 cut(s)	1365, 1794
HincII	GTYRAC	3 cut(s)	1107, 1147, 1267
HindII	GTYRAC	3 cut(s)	1107, 1147, 1267
HinfI	GANTC	7 cut(s)	505, 849, 887, 914, 1280, 2008, 2235
HpaI	GTTAAC	1 cut(s)	1107
HpaII	CCGG	4 cut(s)	378, 515, 522, 725
HphI	GGTGA	8 cut(s)	133, 367, 625, 897, 1041, 1472, 1497, 1777
Hpy166II	GTNNAC	8 cut(s)	65, 174, 1107, 1122, 1147, 1267, 2021, 2316
Hpy188I	TCNGA	8 cut(s)	215, 1012, 1158, 1894, 2007, 2119, 2164, 2303
Hpy188III	TCNNGA	8 cut(s)	725, 846, 867, 1235, 1284, 1662, 1773, 2070
Hpy8I	GTNNAC	8 cut(s)	65, 174, 1107, 1122, 1147, 1267, 2021, 2316
HpyAV	CCTTC	2 cut(s)	646, 722
HpyCH4III	ACNGT	6 cut(s)	17, 50, 188, 1068, 1704, 1921
HpyCH4IV	ACGT	2 cut(s)	664, 1744
HpyF10VI	GCNNNNNNNGC	8 cut(s)	686, 802, 827, 839, 977, 1544, 1836, 2212
HpySE526I	ACGT	2 cut(s)	664, 1744
Hsp92II	CATG	8 cut(s)	416, 465, 1135, 1653, 1807, 1903, 1990, 2145
HspAI	GCGC	2 cut(s)	1365, 1794
Kpn2I	TCCGGA	1 cut(s)	724
KpnI	GGTACC	1 cut(s)	1565
Ksp22I	TGATCA	1 cut(s)	2002
KspAI	GTTAAC	1 cut(s)	1107
Kzo9I	GATC	4 cut(s)	824, 1312, 2002, 2159
LmnI	GCTCC	5 cut(s)	455, 475, 1399, 1454, 1631
LweI	GCATC	5 cut(s)	860, 1511, 1672, 1805, 2290
MabI	ACCWGGT	1 cut(s)	2287
MaeII	ACGT	2 cut(s)	664, 1744
MaeIII	GTNAC	6 cut(s)	660, 694, 1654, 1704, 1808, 1915
MalI	GATC	4 cut(s)	826, 1314, 2004, 2161
MbiI	CCGCTC	1 cut(s)	1047
MboI	GATC	4 cut(s)	824, 1312, 2002, 2159
MhlI	GDGCHC	6 cut(s)	176, 480, 1124, 2173, 2222, 2308
MlsI	TGGCCA	2 cut(s)	539, 901
MluCI	AATT	8 cut(s)	268, 712, 837, 1083, 1439, 1592, 1611, 2013
MluNI	TGGCCA	2 cut(s)	539, 901
MlyI	GAGTC	1 cut(s)	896
MmeI	TCCRAC	2 cut(s)	1360, 1507
Mox20I	TGGCCA	2 cut(s)	539, 901
MroI	TCCGGA	1 cut(s)	724
MroXI	GAANNNNTTC	2 cut(s)	841, 2037
MscI	TGGCCA	2 cut(s)	539, 901
MseI	TTAA	5 cut(s)	45, 675, 1106, 1338, 1958
MslI	CAYNNNNRTG	1 cut(s)	953
Msp20I	TGGCCA	2 cut(s)	539, 901
MspA1I	CMGCKG	4 cut(s)	830, 911, 1310, 1327
MspCI	CTTAAG	1 cut(s)	674
MspI	CCGG	4 cut(s)	378, 515, 522, 725
MspR9I	CCNGG	4 cut(s)	523, 1032, 1559, 2289
Mva1269I	GAATGC	3 cut(s)	630, 1019, 1725
MvaI	CCWGG	3 cut(s)	1032, 1559, 2289
MvnI	CGCG	1 cut(s)	1365
MwoI	GCNNNNNNNGC	8 cut(s)	686, 802, 827, 839, 977, 1544, 1836, 2212
NciI	CCSGG	1 cut(s)	523
NcoI	CCATGG	1 cut(s)	2141
NdeI	CATATG	2 cut(s)	1432, 1516
NdeII	GATC	4 cut(s)	824, 1312, 2002, 2159
NlaIII	CATG	8 cut(s)	416, 465, 1135, 1653, 1807, 1903, 1990, 2145
NlaIV	GGNNCC	7 cut(s)	29, 477, 513, 1029, 1450, 1563, 2172
NmuCI	GTSAC	4 cut(s)	660, 694, 1808, 1915
NspI	RCATGY	1 cut(s)	1135
PceI	AGGCCT	1 cut(s)	1302
PciI	ACATGT	1 cut(s)	1131
PctI	GAATGC	3 cut(s)	630, 1019, 1725
PdmI	GAANNNNTTC	2 cut(s)	841, 2037
PfeI	GAWTC	6 cut(s)	505, 849, 914, 1280, 2008, 2235
PflMI	CCANNNNNTGG	1 cut(s)	1628
PleI	GAGTC	1 cut(s)	895
PpsI	GAGTC	1 cut(s)	895
PpuMI	RGGWCCY	1 cut(s)	1027
PscI	ACATGT	1 cut(s)	1131
Psp124BI	GAGCTC	1 cut(s)	2222
Psp5II	RGGWCCY	1 cut(s)	1027
Psp6I	CCWGG	3 cut(s)	1030, 1557, 2287
PspGI	CCWGG	3 cut(s)	1030, 1557, 2287
PspN4I	GGNNCC	7 cut(s)	29, 477, 513, 1029, 1450, 1563, 2172
PspPI	GGNCC	3 cut(s)	722, 731, 1027
PspPPI	RGGWCCY	1 cut(s)	1027
PstNI	CAGNNNCTG	1 cut(s)	833
PvuII	CAGCTG	3 cut(s)	830, 1310, 1327
RsaI	GTAC	6 cut(s)	190, 258, 348, 1563, 1743, 2139
RsaNI	GTAC	6 cut(s)	189, 257, 347, 1562, 1742, 2138
RseI	CAYNNNNRTG	1 cut(s)	953
SacI	GAGCTC	1 cut(s)	2222
SaqAI	TTAA	5 cut(s)	45, 675, 1106, 1338, 1958
Sau3AI	GATC	4 cut(s)	824, 1312, 2002, 2159
Sau96I	GGNCC	3 cut(s)	722, 731, 1027
ScaI	AGTACT	2 cut(s)	190, 348
SchI	GAGTC	1 cut(s)	896
ScrFI	CCNGG	4 cut(s)	523, 1032, 1559, 2289
SduI	GDGCHC	6 cut(s)	176, 480, 1124, 2173, 2222, 2308
SexAI	ACCWGGT	1 cut(s)	2287
SfaNI	GCATC	5 cut(s)	860, 1511, 1672, 1805, 2290
SfcI	CTRYAG	1 cut(s)	1635
SinI	GGWCC	2 cut(s)	722, 1027
SmiMI	CAYNNNNRTG	1 cut(s)	953
SmlI	CTYRAG	1 cut(s)	674
SmoI	CTYRAG	1 cut(s)	674
SpeI	ACTAGT	1 cut(s)	1718
Sse9I	AATT	8 cut(s)	268, 712, 837, 1083, 1439, 1592, 1611, 2013
SseBI	AGGCCT	1 cut(s)	1302
SsiI	CCGC	9 cut(s)	6, 25, 40, 77, 881, 911, 1045, 1363, 1452
SstI	GAGCTC	1 cut(s)	2222
StuI	AGGCCT	1 cut(s)	1302
StyD4I	CCNGG	4 cut(s)	521, 1030, 1557, 2287
StyI	CCWWGG	2 cut(s)	316, 2141
TaaI	ACNGT	6 cut(s)	17, 50, 188, 1068, 1704, 1921
TaiI	ACGT	2 cut(s)	667, 1747
TaqI	TCGA	3 cut(s)	1285, 1609, 2340
TasI	AATT	8 cut(s)	268, 712, 837, 1083, 1439, 1592, 1611, 2013
TatI	WGTACW	3 cut(s)	188, 256, 346
TauI	GCSGC	1 cut(s)	1365
TfiI	GAWTC	6 cut(s)	505, 849, 914, 1280, 2008, 2235
Tru1I	TTAA	5 cut(s)	45, 675, 1106, 1338, 1958
Tru9I	TTAA	5 cut(s)	45, 675, 1106, 1338, 1958
TseFI	GTSAC	4 cut(s)	660, 694, 1808, 1915
Tsp45I	GTSAC	4 cut(s)	660, 694, 1808, 1915
Van91I	CCANNNNNTGG	1 cut(s)	1628
Vha464I	CTTAAG	1 cut(s)	674
VneI	GTGCAC	2 cut(s)	172, 1120
VpaK11BI	GGWCC	2 cut(s)	722, 1027
XagI	CCTNNNNNAGG	2 cut(s)	450, 1194
XapI	RAATTY	3 cut(s)	712, 1083, 1439
XbaI	TCTAGA	1 cut(s)	1772
XceI	RCATGY	1 cut(s)	1135
XmiI	GTMKAC	1 cut(s)	64
XmnI	GAANNNNTTC	2 cut(s)	841, 2037
ZrmI	AGTACT	2 cut(s)	190, 348

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.