Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0004518

Physical Location & Seq

Genomic Coordinates Forward (+)

3867113 .. 3869001

Gene Structure 1889 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016102

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1428 bp

ATGAACAAGTACACAATCGTCTGCGCTCTTCTTGCCTCCACAAACTCCATTTTATTGGGTTATGATACTGGAGTGATGAGTGGTGCGGTGATTTTGATCACGGATTATTTCAAAATCACACGAACCCAACATGAGATCTTGGTAGGAACCCTCAATGTGTTCTCTTTAATAGGGTCACTAGCATCAGGCAAGACATCGGATATTATAGGCAGGCGTTACACCATAGTGTTAGCTGCATGCACATTTCTAATAGGTGCACTCCTCATGGGCCTAGCACCGTCCTATCCGTTTCTAATGGCAGGGCGGTGCGTGGCCGGAATTGGTGTTGGCTACGCCCTCATGATCGCTCCTGTGTACACAGCCGAGCTCTCACCTGCCATGAACCGGGGTTTTCTGACCTCTCTGCCCGAGGTGTTCATCACTTTTGGTTTGTTACTTGGGTACATAGTCAACTATGCATTATCTGGCTTACCATTGCACTTAAGTTGGAGACTAATGTTAGGGTTAGCGGCGGTGCCGGCGATTGGTATTGGTTTTGGGGTGATAGCAATGCCTGAATCTCCTCGTTGGCTTGTAATGAAAGGCAAACTAAGTGAAGCGAAGAAGGTTCTGATCAGAACATCAGCTTCTGAAGAGGAAGCTCAATTGAGGCTTGAGGAAATAACAAAGGCTGCTATTCAAGGCCCAGAATCGGCCCACGAAGGTGGTTCAGTTTGGAAGGAGATTTTGTTACGGCCCACTAGGCCCACCCGGCGGATGCTCGTTGCTGCTATTGGGATCAACTTCTTCATGCAGGCTTCTGGAAACGACGCGGTGGTGTACTACTGTCCGGAAGTGTTCAAGGCTGCCGGAATTCATAATAAAAGACAACTCTTTGGTGTGAATGTCATTATGGGCCTTTCCAAGGCCCTATTTGTGTTGTTATCGGCGTTGAAATTGGACAAGTACGGGAGGCGACCGCTTTTGTTATTGGGCTCGGCGGGAATGGTGGTCTCATTATTTGGGTTGGGCCTCGGGTCAAAGTTTCTCGAGCATTCGACTAAGAAACCGACTTGGGCAATTGCGTTGTGTATCCTGGCCGTTTGTGCCGATGTTTCTTTCTTTTCAATTGGGCTTGGGCCCATAACGTGGGTCTACTCTTCGGAAATCTTCCCGTTGAGACTACGGGCCCAAGCTTCGAGCCTTGCCATTTCGGTGAACCGGTTAGTGAGTGGAGTGGTGTCAATGACATTTCTAAGCATTTCTCACAAGATCACATTTGGGGGAATATTTTTCGTGTTCGCTGGAATAATGCTGGTCGGTACGGTATTCTTTTACTTCTTCTTGCCGGAGACAAAAGGCAGGACGTTAGAAGACATGGAGACTATTTTCGAAGACACAGATACAACTAAGATCAATTGGGTGAGGGAAATGAGAGAGGTGCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005354 GO:0005355 GO:0005365 GO:0005402 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0007275 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0009653 GO:0009791 GO:0010015 GO:0010101 GO:0010102 GO:0010311 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015146 GO:0015148 GO:0015149 GO:0015166 GO:0015168 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015575 GO:0015576 GO:0015591 GO:0015672 GO:0015749 GO:0015750 GO:0015752 GO:0015753 GO:0015757 GO:0015791 GO:0015793 GO:0015795 GO:0015797 GO:0015798 GO:0015850 GO:0016020 GO:0022622 GO:0022804 GO:0022857 GO:0022890 GO:0032501 GO:0032502 GO:0034219 GO:0034220 GO:0044464 GO:0046323 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071944 GO:0090696 GO:0090697 GO:0090698 GO:0098655 GO:0098660 GO:0098662 GO:0099402 GO:1901618 GO:1902600 GO:1904659 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

476

Amino Acids

51.62

Weight (kDa)

9.32

Isoelectric Point (pI)

35.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	9 - 457	1.1e-107	Sugar (and other) transporter
MFS_1	PF07690	16 - 406	6.7e-32	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004518)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04750 FvH4_1g04750 FvH4_1g04750 FvH4_1g04760 FvH4_1g04760
malus_domestica	MD02G1046300.v1.1 MD15G1184500.v1.1
prunus_persica	Prupe.7G231500_v2.0.a1 Prupe.7G231600_v2.0.a1
pyrus_communis	pycom02g03880 pycom15g16610
rosa_chinensis	RchiOBHm_Chr2g0090351 RchiOBHm_Chr2g0090361
rosa_laevigata	RLG00000016100 RLG00000016102
rosa_multiflora	Rmu_sc0004514.1_g000004 Rmu_sc0006235.1_g000008
rosa_roxburghii	Rroxscaffold_2G00151230 Rroxscaffold_2G00151250
rosa_rugosa	Rorug02G0006700 Rorug02G0006800 Rorug02G0006800
rosa_samantha	Rh2AG052700 Rh2AG052800 Rh2BG051400 Rh2BG051600 Rh2CG053600 Rh2CG053700 Rh2DG052700 Rh2DG052800
rosa_wichuraiana	Rw2G004410 Rw2G004420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	382
Acc36I	ACCTGC	1 cut(s)	382
AccB1I	GGYRCC	2 cut(s)	514, 1420
AccB7I	CCANNNNNTGG	1 cut(s)	1128
AccI	GTMKAC	1 cut(s)	1134
AccII	CGCG	1 cut(s)	812
AccIII	TCCGGA	1 cut(s)	829
AciI	CCGC	8 cut(s)	86, 304, 509, 512, 754, 812, 959, 980
AclWI	GGATC	1 cut(s)	785
AcoI	YGGCCR	2 cut(s)	312, 1077
AcsI	RAATTY	1 cut(s)	852
AcuI	CTGAAG	1 cut(s)	651
AfaI	GTAC	6 cut(s)	11, 356, 443, 821, 947, 1303
AfiI	CCNNNNNNNGG	6 cut(s)	384, 524, 691, 753, 904, 1128
AflII	CTTAAG	1 cut(s)	481
AgeI	ACCGGT	1 cut(s)	1200
AgsI	TTSAA	5 cut(s)	112, 680, 841, 934, 1107
AjnI	CCWGG	1 cut(s)	1074
AleI	CACNNNNGTG	2 cut(s)	224, 702
AluBI	AGCT	5 cut(s)	233, 367, 626, 641, 1175
AluI	AGCT	5 cut(s)	233, 367, 626, 641, 1175
Alw21I	GWGCWC	2 cut(s)	259, 369
Alw26I	GTCTC	5 cut(s)	484, 997, 1153, 1325, 1355
Alw44I	GTGCAC	1 cut(s)	255
AlwI	GGATC	1 cut(s)	785
AlwNI	CAGNNNCTG	1 cut(s)	629
Ama87I	CYCGRG	3 cut(s)	407, 1013, 1028
Aor13HI	TCCGGA	1 cut(s)	829
ApaI	GGGCCC	2 cut(s)	1122, 1171
ApaLI	GTGCAC	1 cut(s)	255
ApeKI	GCWGC	4 cut(s)	233, 671, 767, 845
ApoI	RAATTY	1 cut(s)	852
AsiGI	ACCGGT	1 cut(s)	1200
AspLEI	GCGC	1 cut(s)	26
AsuC2I	CCSGG	2 cut(s)	386, 751
AsuHPI	GGTGA	5 cut(s)	100, 363, 553, 1207, 1414
AsuII	TTCGAA	1 cut(s)	1371
AvaI	CYCGRG	3 cut(s)	407, 1013, 1028
BaeGI	GKGCMC	3 cut(s)	259, 1122, 1171
BaeI	ACNNNNGTAYC	2 cut(s)	57, 90
BanI	GGYRCC	2 cut(s)	514, 1420
BanII	GRGCYC	4 cut(s)	369, 977, 1122, 1171
BbsI	GAAGAC	2 cut(s)	1359, 1380
Bbv12I	GWGCWC	2 cut(s)	259, 369
BbvI	GCAGC	4 cut(s)	220, 658, 754, 832
BceAI	ACGGC	2 cut(s)	749, 1064
BciT130I	CCWGG	1 cut(s)	1076
BciVI	GTATCC	1 cut(s)	1082
BclI	TGATCA	2 cut(s)	96, 612
BcnI	CCSGG	2 cut(s)	386, 751
BcoDI	GTCTC	5 cut(s)	484, 997, 1153, 1325, 1355
BfaI	CTAG	3 cut(s)	179, 272, 741
BfrI	CTTAAG	1 cut(s)	481
BfuAI	ACCTGC	1 cut(s)	382
BfuI	GTATCC	1 cut(s)	1082
BglI	GCCNNNNNGGC	2 cut(s)	742, 751
BglII	AGATCT	1 cut(s)	135
BisI	GCNGC	5 cut(s)	234, 510, 672, 768, 846
BlsI	GCNGC	5 cut(s)	235, 511, 673, 769, 847
Bme1390I	CCNGG	3 cut(s)	386, 751, 1076
BmeT110I	CYCGRG	3 cut(s)	407, 1013, 1028
BmiI	GGNNCC	5 cut(s)	148, 516, 1120, 1169, 1422
BmrFI	CCNGG	3 cut(s)	386, 751, 1076
BmsI	GCATC	2 cut(s)	191, 747
BpiI	GAAGAC	2 cut(s)	1359, 1380
BpmI	CTGGAG	1 cut(s)	90
Bpu14I	TTCGAA	1 cut(s)	1371
BpuEI	CTTGAG	1 cut(s)	674
BpuMI	CCSGG	2 cut(s)	386, 751
BsaBI	GATNNNNATC	1 cut(s)	95
BsaI	GGTCTC	1 cut(s)	997
BsaJI	CCNNGG	4 cut(s)	385, 408, 903, 1012
BsaWI	WCCGGW	2 cut(s)	829, 1200
BsaXI	ACNNNNNCTCC	2 cut(s)	713, 743
Bsc4I	CCNNNNNNNGG	6 cut(s)	384, 524, 691, 753, 904, 1128
Bse118I	RCCGGY	2 cut(s)	517, 1200
Bse1I	ACTGG	1 cut(s)	73
Bse3DI	GCAATG	2 cut(s)	473, 555
Bse8I	GATNNNNATC	1 cut(s)	95
BseAI	TCCGGA	1 cut(s)	829
BseBI	CCWGG	1 cut(s)	1076
BseDI	CCNNGG	4 cut(s)	385, 408, 903, 1012
BseGI	GGATG	1 cut(s)	762
BseJI	GATNNNNATC	1 cut(s)	95
BseLI	CCNNNNNNNGG	6 cut(s)	384, 524, 691, 753, 904, 1128
BseMI	GCAATG	2 cut(s)	473, 555
BseNI	ACTGG	1 cut(s)	73
BseRI	GAGGAG	2 cut(s)	251, 552
BseSI	GKGCMC	3 cut(s)	259, 1122, 1171
BseXI	GCAGC	4 cut(s)	220, 658, 754, 832
Bsh1236I	CGCG	1 cut(s)	812
Bsh1285I	CGRYCG	1 cut(s)	959
BshNI	GGYRCC	2 cut(s)	514, 1420
BshTI	ACCGGT	1 cut(s)	1200
BsiEI	CGRYCG	1 cut(s)	959
BsiHKAI	GWGCWC	2 cut(s)	259, 369
BsiHKCI	CYCGRG	3 cut(s)	407, 1013, 1028
BsiSI	CCGG	8 cut(s)	315, 385, 518, 751, 830, 849, 1201, 1328
BslI	CCNNNNNNNGG	6 cut(s)	384, 524, 691, 753, 904, 1128
BsmAI	GTCTC	5 cut(s)	484, 997, 1153, 1325, 1355
BsmI	GAATGC	1 cut(s)	1033
Bso31I	GGTCTC	1 cut(s)	997
BsoBI	CYCGRG	3 cut(s)	407, 1013, 1028
Bsp119I	TTCGAA	1 cut(s)	1371
Bsp120I	GGGCCC	2 cut(s)	1118, 1167
Bsp1286I	GDGCHC	5 cut(s)	259, 369, 977, 1122, 1171
Bsp13I	TCCGGA	1 cut(s)	829
Bsp1407I	TGTACA	1 cut(s)	354
Bsp143I	GATC	7 cut(s)	96, 135, 342, 612, 777, 1251, 1392
BspACI	CCGC	8 cut(s)	86, 304, 509, 512, 754, 812, 959, 980
BspEI	TCCGGA	1 cut(s)	829
BspFNI	CGCG	1 cut(s)	812
BspHI	TCATGA	1 cut(s)	339
BspLI	GGNNCC	5 cut(s)	148, 516, 1120, 1169, 1422
BspMI	ACCTGC	1 cut(s)	382
BspPI	GGATC	1 cut(s)	785
BspQI	GCTCTTC	1 cut(s)	33
BspT104I	TTCGAA	1 cut(s)	1371
BspT107I	GGYRCC	2 cut(s)	514, 1420
BspTI	CTTAAG	1 cut(s)	481
BspTNI	GGTCTC	1 cut(s)	997
BsrDI	GCAATG	2 cut(s)	473, 555
BsrFI	RCCGGY	2 cut(s)	517, 1200
BsrGI	TGTACA	1 cut(s)	354
BsrI	ACTGG	1 cut(s)	73
BssAI	RCCGGY	2 cut(s)	517, 1200
BssECI	CCNNGG	4 cut(s)	385, 408, 903, 1012
BssMI	GATC	7 cut(s)	96, 135, 342, 612, 777, 1251, 1392
BssT1I	CCWWGG	1 cut(s)	903
Bst2UI	CCWGG	1 cut(s)	1076
Bst4CI	ACNGT	3 cut(s)	279, 827, 1306
Bst6I	CTCTTC	3 cut(s)	33, 627, 1144
BstAFI	CTTAAG	1 cut(s)	481
BstAUI	TGTACA	1 cut(s)	354
BstBI	TTCGAA	1 cut(s)	1371
BstC8I	GCNNGC	4 cut(s)	212, 238, 519, 795
BstDEI	CTNAG	4 cut(s)	590, 1041, 1235, 1389
BstENI	CCTNNNNNAGG	1 cut(s)	902
BstF5I	GGATG	1 cut(s)	762
BstFNI	CGCG	1 cut(s)	812
BstHHI	GCGC	1 cut(s)	26
BstKTI	GATC	7 cut(s)	99, 138, 345, 615, 780, 1254, 1395
BstMAI	GTCTC	5 cut(s)	484, 997, 1153, 1325, 1355
BstMBI	GATC	7 cut(s)	96, 135, 342, 612, 777, 1251, 1392
BstMCI	CGRYCG	1 cut(s)	959
BstMWI	GCNNNNNNNGC	5 cut(s)	32, 518, 742, 751, 1085
BstNI	CCWGG	1 cut(s)	1076
BstNSI	RCATGY	1 cut(s)	240
BstSCI	CCNGG	3 cut(s)	384, 749, 1074
BstSLI	GKGCMC	3 cut(s)	259, 1122, 1171
BstUI	CGCG	1 cut(s)	812
BstV1I	GCAGC	4 cut(s)	220, 658, 754, 832
BstV2I	GAAGAC	2 cut(s)	1359, 1380
BstX2I	RGATCY	1 cut(s)	135
BstXI	CCANNNNNNTGG	2 cut(s)	55, 704
BstYI	RGATCY	1 cut(s)	135
BsuI	GTATCC	1 cut(s)	1082
BtsCI	GGATG	1 cut(s)	762
BveI	ACCTGC	1 cut(s)	382
Cac8I	GCNNGC	4 cut(s)	212, 238, 519, 795
CaiI	CAGNNNCTG	1 cut(s)	629
CciI	TCATGA	1 cut(s)	339
CfoI	GCGC	1 cut(s)	26
Cfr10I	RCCGGY	2 cut(s)	517, 1200
CseI	GACGC	1 cut(s)	818
Csp6I	GTAC	6 cut(s)	10, 355, 442, 820, 946, 1302
CspAI	ACCGGT	1 cut(s)	1200
CviAII	CATG	7 cut(s)	131, 237, 265, 340, 379, 790, 1357
CviQI	GTAC	6 cut(s)	10, 355, 442, 820, 946, 1302
DdeI	CTNAG	4 cut(s)	590, 1041, 1235, 1389
DpnI	GATC	7 cut(s)	98, 137, 344, 614, 779, 1253, 1394
DpnII	GATC	7 cut(s)	96, 135, 342, 612, 777, 1251, 1392
EaeI	YGGCCR	2 cut(s)	312, 1077
Eam1104I	CTCTTC	3 cut(s)	33, 627, 1144
EarI	CTCTTC	3 cut(s)	33, 627, 1144
EciI	GGCGGA	1 cut(s)	769
Ecl136II	GAGCTC	1 cut(s)	367
Eco130I	CCWWGG	1 cut(s)	903
Eco24I	GRGCYC	4 cut(s)	369, 977, 1122, 1171
Eco31I	GGTCTC	1 cut(s)	997
Eco53kI	GAGCTC	1 cut(s)	367
Eco57I	CTGAAG	1 cut(s)	651
Eco88I	CYCGRG	3 cut(s)	407, 1013, 1028
EcoICRI	GAGCTC	1 cut(s)	367
EcoNI	CCTNNNNNAGG	1 cut(s)	902
EcoO109I	RGGNCCY	1 cut(s)	907
EcoRI	GAATTC	1 cut(s)	852
EcoRII	CCWGG	1 cut(s)	1074
EcoT14I	CCWWGG	1 cut(s)	903
EcoT22I	ATGCAT	1 cut(s)	460
EcoT38I	GRGCYC	4 cut(s)	369, 977, 1122, 1171
ErhI	CCWWGG	1 cut(s)	903
FaeI	CATG	7 cut(s)	134, 240, 268, 343, 382, 793, 1360
FatI	CATG	7 cut(s)	130, 236, 264, 339, 378, 789, 1356
FauI	CCCGC	1 cut(s)	973
FbaI	TGATCA	2 cut(s)	96, 612
FblI	GTMKAC	1 cut(s)	1134
Fnu4HI	GCNGC	5 cut(s)	234, 510, 672, 768, 846
FokI	GGATG	1 cut(s)	769
FriOI	GRGCYC	4 cut(s)	369, 977, 1122, 1171
Fsp4HI	GCNGC	5 cut(s)	234, 510, 672, 768, 846
FspBI	CTAG	3 cut(s)	179, 272, 741
GlaI	GCGC	1 cut(s)	25
GluI	GCNGC	5 cut(s)	234, 510, 672, 768, 846
GsuI	CTGGAG	1 cut(s)	90
HapII	CCGG	8 cut(s)	315, 385, 518, 751, 830, 849, 1201, 1328
HgaI	GACGC	1 cut(s)	818
HhaI	GCGC	1 cut(s)	26
Hin1II	CATG	7 cut(s)	134, 240, 268, 343, 382, 793, 1360
Hin6I	GCGC	1 cut(s)	24
HinP1I	GCGC	1 cut(s)	24
HincII	GTYRAC	1 cut(s)	451
HindII	GTYRAC	1 cut(s)	451
HindIII	AAGCTT	1 cut(s)	1173
HinfI	GANTC	2 cut(s)	557, 689
HpaII	CCGG	8 cut(s)	315, 385, 518, 751, 830, 849, 1201, 1328
HphI	GGTGA	5 cut(s)	100, 363, 553, 1207, 1414
Hpy166II	GTNNAC	8 cut(s)	12, 257, 355, 357, 451, 820, 1135, 1198
Hpy188I	TCNGA	6 cut(s)	199, 396, 612, 617, 631, 1144
Hpy188III	TCNNGA	4 cut(s)	340, 801, 830, 1028
Hpy8I	GTNNAC	8 cut(s)	12, 257, 355, 357, 451, 820, 1135, 1198
Hpy99I	CGWCG	1 cut(s)	812
HpyAV	CCTTC	3 cut(s)	598, 695, 712
HpyCH4III	ACNGT	3 cut(s)	279, 827, 1306
HpyCH4IV	ACGT	2 cut(s)	1127, 1346
HpyCH4V	TGCA	6 cut(s)	236, 240, 257, 458, 478, 793
HpyF10VI	GCNNNNNNNGC	5 cut(s)	32, 518, 742, 751, 1085
HpyF3I	CTNAG	4 cut(s)	590, 1041, 1235, 1389
HpySE526I	ACGT	2 cut(s)	1127, 1346
Hsp92II	CATG	7 cut(s)	134, 240, 268, 343, 382, 793, 1360
HspAI	GCGC	1 cut(s)	24
Kpn2I	TCCGGA	1 cut(s)	829
KroI	GCCGGC	1 cut(s)	517
KroNI	GCCGGC	1 cut(s)	519
Ksp22I	TGATCA	2 cut(s)	96, 612
Kzo9I	GATC	7 cut(s)	96, 135, 342, 612, 777, 1251, 1392
LguI	GCTCTTC	1 cut(s)	33
LmnI	GCTCC	1 cut(s)	352
Lsp1109I	GCAGC	4 cut(s)	220, 658, 754, 832
LweI	GCATC	2 cut(s)	191, 747
MaeI	CTAG	3 cut(s)	179, 272, 741
MaeII	ACGT	2 cut(s)	1127, 1346
MaeIII	GTNAC	4 cut(s)	174, 215, 432, 729
MalI	GATC	7 cut(s)	98, 137, 344, 614, 779, 1253, 1394
MboI	GATC	7 cut(s)	96, 135, 342, 612, 777, 1251, 1392
MboII	GAAGA	9 cut(s)	20, 613, 644, 778, 1131, 1141, 1312, 1364, 1385
MfeI	CAATTG	4 cut(s)	644, 1059, 1107, 1396
MflI	RGATCY	1 cut(s)	135
MhlI	GDGCHC	5 cut(s)	259, 369, 977, 1122, 1171
MluCI	AATT	7 cut(s)	318, 644, 852, 935, 1059, 1107, 1396
MmeI	TCCRAC	1 cut(s)	467
Mph1103I	ATGCAT	1 cut(s)	460
MroI	TCCGGA	1 cut(s)	829
MroNI	GCCGGC	1 cut(s)	517
MseI	TTAA	2 cut(s)	167, 482
MslI	CAYNNNNRTG	3 cut(s)	224, 702, 1193
MspCI	CTTAAG	1 cut(s)	481
MspI	CCGG	8 cut(s)	315, 385, 518, 751, 830, 849, 1201, 1328
MspR9I	CCNGG	3 cut(s)	386, 751, 1076
MunI	CAATTG	4 cut(s)	644, 1059, 1107, 1396
Mva1269I	GAATGC	1 cut(s)	1033
MvaI	CCWGG	1 cut(s)	1076
MvnI	CGCG	1 cut(s)	812
MwoI	GCNNNNNNNGC	5 cut(s)	32, 518, 742, 751, 1085
NaeI	GCCGGC	1 cut(s)	519
NciI	CCSGG	2 cut(s)	386, 751
NdeII	GATC	7 cut(s)	96, 135, 342, 612, 777, 1251, 1392
NgoMIV	GCCGGC	1 cut(s)	517
NlaIII	CATG	7 cut(s)	134, 240, 268, 343, 382, 793, 1360
NlaIV	GGNNCC	5 cut(s)	148, 516, 1120, 1169, 1422
NmeAIII	GCCGAG	2 cut(s)	388, 956
NmuCI	GTSAC	1 cut(s)	174
NsiI	ATGCAT	1 cut(s)	460
NspI	RCATGY	1 cut(s)	240
NspV	TTCGAA	1 cut(s)	1371
OliI	CACNNNNGTG	2 cut(s)	224, 702
PaeI	GCATGC	1 cut(s)	240
PaeR7I	CTCGAG	1 cut(s)	1028
PagI	TCATGA	1 cut(s)	339
PaqCI	CACCTGC	1 cut(s)	382
PciSI	GCTCTTC	1 cut(s)	33
PctI	GAATGC	1 cut(s)	1033
PdiI	GCCGGC	1 cut(s)	519
PfeI	GAWTC	2 cut(s)	557, 689
PflMI	CCANNNNNTGG	1 cut(s)	1128
PinAI	ACCGGT	1 cut(s)	1200
PkrI	GCNGC	5 cut(s)	235, 511, 673, 769, 847
Psp124BI	GAGCTC	1 cut(s)	369
Psp6I	CCWGG	1 cut(s)	1074
PspGI	CCWGG	1 cut(s)	1074
PspN4I	GGNNCC	5 cut(s)	148, 516, 1120, 1169, 1422
PspOMI	GGGCCC	2 cut(s)	1118, 1167
PstNI	CAGNNNCTG	1 cut(s)	629
PsuI	RGATCY	1 cut(s)	135
RsaI	GTAC	6 cut(s)	11, 356, 443, 821, 947, 1303
RsaNI	GTAC	6 cut(s)	10, 355, 442, 820, 946, 1302
RseI	CAYNNNNRTG	3 cut(s)	224, 702, 1193
SacI	GAGCTC	1 cut(s)	369
SapI	GCTCTTC	1 cut(s)	33
SaqAI	TTAA	2 cut(s)	167, 482
SatI	GCNGC	5 cut(s)	234, 510, 672, 768, 846
Sau3AI	GATC	7 cut(s)	96, 135, 342, 612, 777, 1251, 1392
ScrFI	CCNGG	3 cut(s)	386, 751, 1076
SduI	GDGCHC	5 cut(s)	259, 369, 977, 1122, 1171
SfaNI	GCATC	2 cut(s)	191, 747
SfiI	GGCCNNNNNGGCC	1 cut(s)	742
Sfr274I	CTCGAG	1 cut(s)	1028
SfuI	TTCGAA	1 cut(s)	1371
SlaI	CTCGAG	1 cut(s)	1028
SmiMI	CAYNNNNRTG	3 cut(s)	224, 702, 1193
SmlI	CTYRAG	3 cut(s)	481, 653, 1028
SmoI	CTYRAG	3 cut(s)	481, 653, 1028
SphI	GCATGC	1 cut(s)	240
Sse9I	AATT	7 cut(s)	318, 644, 852, 935, 1059, 1107, 1396
SsiI	CCGC	8 cut(s)	86, 304, 509, 512, 754, 812, 959, 980
SspI	AATATT	1 cut(s)	1269
SspMI	CTAG	3 cut(s)	179, 272, 741
SstI	GAGCTC	1 cut(s)	369
StyD4I	CCNGG	3 cut(s)	384, 749, 1074
StyI	CCWWGG	1 cut(s)	903
TaaI	ACNGT	3 cut(s)	279, 827, 1306
TaiI	ACGT	2 cut(s)	1130, 1349
TaqI	TCGA	4 cut(s)	1029, 1037, 1178, 1371
TasI	AATT	7 cut(s)	318, 644, 852, 935, 1059, 1107, 1396
TatI	WGTACW	3 cut(s)	9, 354, 819
TauI	GCSGC	1 cut(s)	512
TfiI	GAWTC	2 cut(s)	557, 689
Tru1I	TTAA	2 cut(s)	167, 482
Tru9I	TTAA	2 cut(s)	167, 482
TseFI	GTSAC	1 cut(s)	174
TseI	GCWGC	4 cut(s)	233, 671, 767, 845
Tsp45I	GTSAC	1 cut(s)	174
TspDTI	ATGAA	6 cut(s)	17, 395, 406, 593, 778, 845
TspGWI	ACGGA	2 cut(s)	116, 276
Van91I	CCANNNNNTGG	1 cut(s)	1128
Vha464I	CTTAAG	1 cut(s)	481
VneI	GTGCAC	1 cut(s)	255
XagI	CCTNNNNNAGG	1 cut(s)	902
XapI	RAATTY	1 cut(s)	852
XceI	RCATGY	1 cut(s)	240
XhoI	CTCGAG	1 cut(s)	1028
XmiI	GTMKAC	1 cut(s)	1134
XspI	CTAG	3 cut(s)	179, 272, 741
Zsp2I	ATGCAT	1 cut(s)	460

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.