Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0091491 |
| rosa_laevigata | RLG00000016228 |
| rosa_multiflora | Rmu_sc0002407.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00150030 |
| rosa_rugosa | Rorug02G0018200 |
| rosa_samantha | Rh2AG063200 Rh2BG062800 Rh2CG064500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 283 |
| Acc36I | ACCTGC | 2 cut(s) | 283, 504 |
| AcsI | RAATTY | 2 cut(s) | 9, 101 |
| AcuI | CTGAAG | 1 cut(s) | 443 |
| AgsI | TTSAA | 3 cut(s) | 332, 393, 543 |
| AluBI | AGCT | 3 cut(s) | 463, 506, 552 |
| AluI | AGCT | 3 cut(s) | 463, 506, 552 |
| Alw26I | GTCTC | 1 cut(s) | 172 |
| ApoI | RAATTY | 2 cut(s) | 9, 101 |
| AsuHPI | GGTGA | 1 cut(s) | 437 |
| BbsI | GAAGAC | 1 cut(s) | 540 |
| BccI | CCATC | 2 cut(s) | 223, 296 |
| BcoDI | GTCTC | 1 cut(s) | 172 |
| BfaI | CTAG | 1 cut(s) | 15 |
| BfmI | CTRYAG | 1 cut(s) | 547 |
| BfuAI | ACCTGC | 2 cut(s) | 283, 504 |
| BmsI | GCATC | 3 cut(s) | 279, 364, 444 |
| BpiI | GAAGAC | 1 cut(s) | 540 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 148, 178 |
| Bse1I | ACTGG | 1 cut(s) | 528 |
| BseGI | GGATG | 1 cut(s) | 379 |
| BseNI | ACTGG | 1 cut(s) | 528 |
| BseYI | CCCAGC | 1 cut(s) | 38 |
| BsgI | GTGCAG | 1 cut(s) | 266 |
| BsmAI | GTCTC | 1 cut(s) | 172 |
| BsmBI | CGTCTC | 1 cut(s) | 172 |
| BspMI | ACCTGC | 2 cut(s) | 283, 504 |
| BsrI | ACTGG | 1 cut(s) | 528 |
| Bst4CI | ACNGT | 2 cut(s) | 405, 586 |
| BstF5I | GGATG | 1 cut(s) | 379 |
| BstMAI | GTCTC | 1 cut(s) | 172 |
| BstSFI | CTRYAG | 1 cut(s) | 547 |
| BstV2I | GAAGAC | 1 cut(s) | 540 |
| BtsCI | GGATG | 1 cut(s) | 379 |
| BtsIMutI | CAGTG | 1 cut(s) | 591 |
| BveI | ACCTGC | 2 cut(s) | 283, 504 |
| CseI | GACGC | 1 cut(s) | 246 |
| CviAII | CATG | 3 cut(s) | 54, 196, 416 |
| CviJI | RGCY | 5 cut(s) | 38, 434, 463, 506, 552 |
| CviKI_1 | RGCY | 5 cut(s) | 38, 434, 463, 506, 552 |
| Eco32I | GATATC | 1 cut(s) | 399 |
| Eco57I | CTGAAG | 1 cut(s) | 443 |
| EcoRV | GATATC | 1 cut(s) | 399 |
| Esp3I | CGTCTC | 1 cut(s) | 172 |
| FaeI | CATG | 3 cut(s) | 57, 199, 419 |
| FatI | CATG | 3 cut(s) | 53, 195, 415 |
| FokI | GGATG | 1 cut(s) | 386 |
| FspBI | CTAG | 1 cut(s) | 15 |
| GsaI | CCCAGC | 1 cut(s) | 42 |
| HgaI | GACGC | 1 cut(s) | 246 |
| Hin1II | CATG | 3 cut(s) | 57, 199, 419 |
| HinfI | GANTC | 3 cut(s) | 345, 359, 468 |
| HphI | GGTGA | 1 cut(s) | 437 |
| Hpy188I | TCNGA | 1 cut(s) | 262 |
| Hpy188III | TCNNGA | 3 cut(s) | 107, 283, 519 |
| HpyAV | CCTTC | 3 cut(s) | 147, 326, 414 |
| HpyCH4III | ACNGT | 2 cut(s) | 405, 586 |
| HpyCH4V | TGCA | 6 cut(s) | 195, 247, 292, 338, 377, 557 |
| Hsp92II | CATG | 3 cut(s) | 57, 199, 419 |
| LmnI | GCTCC | 1 cut(s) | 254 |
| LpnPI | CCDG | 7 cut(s) | 24, 268, 278, 489, 499, 504, 509 |
| LweI | GCATC | 3 cut(s) | 279, 364, 444 |
| MaeI | CTAG | 1 cut(s) | 15 |
| MaeIII | GTNAC | 1 cut(s) | 80 |
| MboII | GAAGA | 4 cut(s) | 278, 298, 311, 545 |
| MluCI | AATT | 4 cut(s) | 9, 101, 269, 573 |
| MlyI | GAGTC | 2 cut(s) | 353, 354 |
| MnlI | CCTC | 3 cut(s) | 13, 421, 583 |
| MseI | TTAA | 2 cut(s) | 351, 576 |
| NlaIII | CATG | 3 cut(s) | 57, 199, 419 |
| PaqCI | CACCTGC | 1 cut(s) | 283 |
| PfeI | GAWTC | 1 cut(s) | 468 |
| PleI | GAGTC | 2 cut(s) | 353, 353 |
| PpsI | GAGTC | 2 cut(s) | 353, 353 |
| PspFI | CCCAGC | 1 cut(s) | 38 |
| SaqAI | TTAA | 2 cut(s) | 351, 576 |
| SchI | GAGTC | 2 cut(s) | 353, 354 |
| SetI | ASST | 7 cut(s) | 297, 337, 465, 508, 518, 554, 594 |
| SfaNI | GCATC | 3 cut(s) | 279, 364, 444 |
| SfcI | CTRYAG | 1 cut(s) | 547 |
| Sse9I | AATT | 4 cut(s) | 9, 101, 269, 573 |
| SspMI | CTAG | 1 cut(s) | 15 |
| TaaI | ACNGT | 2 cut(s) | 405, 586 |
| TasI | AATT | 4 cut(s) | 9, 101, 269, 573 |
| TfiI | GAWTC | 1 cut(s) | 468 |
| Tru1I | TTAA | 2 cut(s) | 351, 576 |
| Tru9I | TTAA | 2 cut(s) | 351, 576 |
| TscAI | CASTG | 1 cut(s) | 591 |
| TspDTI | ATGAA | 4 cut(s) | 42, 212, 279, 546 |
| TspGWI | ACGGA | 1 cut(s) | 99 |
| TspRI | CASTG | 1 cut(s) | 591 |
| XapI | RAATTY | 2 cut(s) | 9, 101 |
| XspI | CTAG | 1 cut(s) | 15 |