Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0091491 |
| rosa_laevigata | RLG00000016228 |
| rosa_multiflora | Rmu_sc0002407.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00150030 |
| rosa_rugosa | Rorug02G0018200 |
| rosa_samantha | Rh2AG063200 Rh2BG062800 Rh2CG064500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 139 |
| Acc36I | ACCTGC | 1 cut(s) | 139 |
| AclWI | GGATC | 1 cut(s) | 257 |
| AcsI | RAATTY | 1 cut(s) | 240 |
| AgsI | TTSAA | 1 cut(s) | 323 |
| AluBI | AGCT | 1 cut(s) | 203 |
| AluI | AGCT | 1 cut(s) | 203 |
| Alw26I | GTCTC | 1 cut(s) | 28 |
| AlwI | GGATC | 1 cut(s) | 257 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 218 |
| ApoI | RAATTY | 1 cut(s) | 240 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 129 |
| AspLEI | GCGC | 1 cut(s) | 51 |
| BccI | CCATC | 2 cut(s) | 79, 152 |
| BcoDI | GTCTC | 1 cut(s) | 28 |
| BfmI | CTRYAG | 1 cut(s) | 91 |
| BfuAI | ACCTGC | 1 cut(s) | 139 |
| BmsI | GCATC | 3 cut(s) | 135, 205, 294 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 274, 306 |
| BsaBI | GATNNNNATC | 1 cut(s) | 254 |
| BsaJI | CCNNGG | 1 cut(s) | 313 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 34 |
| Bse8I | GATNNNNATC | 1 cut(s) | 254 |
| BseDI | CCNNGG | 1 cut(s) | 313 |
| BseGI | GGATG | 2 cut(s) | 291, 309 |
| BseJI | GATNNNNATC | 1 cut(s) | 254 |
| BseYI | CCCAGC | 1 cut(s) | 199 |
| BsgI | GTGCAG | 1 cut(s) | 122 |
| BsmAI | GTCTC | 1 cut(s) | 28 |
| BsmBI | CGTCTC | 1 cut(s) | 28 |
| Bsp143I | GATC | 1 cut(s) | 249 |
| BspMI | ACCTGC | 1 cut(s) | 139 |
| BspPI | GGATC | 1 cut(s) | 257 |
| BssECI | CCNNGG | 1 cut(s) | 313 |
| BssMI | GATC | 1 cut(s) | 249 |
| BssT1I | CCWWGG | 1 cut(s) | 313 |
| BstF5I | GGATG | 2 cut(s) | 291, 309 |
| BstHHI | GCGC | 1 cut(s) | 51 |
| BstKTI | GATC | 1 cut(s) | 252 |
| BstMAI | GTCTC | 1 cut(s) | 28 |
| BstMBI | GATC | 1 cut(s) | 249 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 55 |
| BstSFI | CTRYAG | 1 cut(s) | 91 |
| BtsCI | GGATG | 2 cut(s) | 291, 309 |
| BveI | ACCTGC | 1 cut(s) | 139 |
| CaiI | CAGNNNCTG | 1 cut(s) | 218 |
| CfoI | GCGC | 1 cut(s) | 51 |
| CseI | GACGC | 1 cut(s) | 102 |
| CviAII | CATG | 2 cut(s) | 52, 245 |
| CviJI | RGCY | 1 cut(s) | 203 |
| CviKI_1 | RGCY | 1 cut(s) | 203 |
| DpnI | GATC | 1 cut(s) | 251 |
| DpnII | GATC | 1 cut(s) | 249 |
| Eco130I | CCWWGG | 1 cut(s) | 313 |
| EcoT14I | CCWWGG | 1 cut(s) | 313 |
| ErhI | CCWWGG | 1 cut(s) | 313 |
| Esp3I | CGTCTC | 1 cut(s) | 28 |
| FaeI | CATG | 2 cut(s) | 55, 248 |
| FaiI | YATR | 6 cut(s) | 53, 70, 72, 93, 99, 246 |
| FatI | CATG | 2 cut(s) | 51, 244 |
| FokI | GGATG | 2 cut(s) | 298, 316 |
| GlaI | GCGC | 1 cut(s) | 50 |
| GsaI | CCCAGC | 1 cut(s) | 203 |
| HgaI | GACGC | 1 cut(s) | 102 |
| HhaI | GCGC | 1 cut(s) | 51 |
| Hin1II | CATG | 2 cut(s) | 55, 248 |
| Hin6I | GCGC | 1 cut(s) | 49 |
| HinP1I | GCGC | 1 cut(s) | 49 |
| HinfI | GANTC | 3 cut(s) | 130, 275, 289 |
| Hpy188I | TCNGA | 2 cut(s) | 118, 214 |
| Hpy188III | TCNNGA | 2 cut(s) | 139, 259 |
| HpyAV | CCTTC | 1 cut(s) | 256 |
| HpyCH4V | TGCA | 4 cut(s) | 103, 148, 268, 307 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 55 |
| Hsp92II | CATG | 2 cut(s) | 55, 248 |
| HspAI | GCGC | 1 cut(s) | 49 |
| Kzo9I | GATC | 1 cut(s) | 249 |
| LmnI | GCTCC | 1 cut(s) | 110 |
| LpnPI | CCDG | 5 cut(s) | 124, 134, 204, 213, 244 |
| LweI | GCATC | 3 cut(s) | 135, 205, 294 |
| MalI | GATC | 1 cut(s) | 251 |
| MboI | GATC | 1 cut(s) | 249 |
| MboII | GAAGA | 2 cut(s) | 154, 167 |
| MluCI | AATT | 2 cut(s) | 125, 240 |
| MlyI | GAGTC | 2 cut(s) | 283, 284 |
| MnlI | CCTC | 1 cut(s) | 276 |
| MroXI | GAANNNNTTC | 1 cut(s) | 129 |
| MseI | TTAA | 1 cut(s) | 224 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 55 |
| NdeII | GATC | 1 cut(s) | 249 |
| NlaIII | CATG | 2 cut(s) | 55, 248 |
| PaqCI | CACCTGC | 1 cut(s) | 139 |
| PdmI | GAANNNNTTC | 1 cut(s) | 129 |
| PfeI | GAWTC | 1 cut(s) | 130 |
| PleI | GAGTC | 2 cut(s) | 283, 283 |
| PpsI | GAGTC | 2 cut(s) | 283, 283 |
| PspFI | CCCAGC | 1 cut(s) | 199 |
| PstNI | CAGNNNCTG | 1 cut(s) | 218 |
| SaqAI | TTAA | 1 cut(s) | 224 |
| Sau3AI | GATC | 1 cut(s) | 249 |
| SchI | GAGTC | 2 cut(s) | 283, 284 |
| SetI | ASST | 3 cut(s) | 153, 205, 267 |
| SfaNI | GCATC | 3 cut(s) | 135, 205, 294 |
| SfcI | CTRYAG | 1 cut(s) | 91 |
| Sse9I | AATT | 2 cut(s) | 125, 240 |
| StyI | CCWWGG | 1 cut(s) | 313 |
| TasI | AATT | 2 cut(s) | 125, 240 |
| TfiI | GAWTC | 1 cut(s) | 130 |
| Tru1I | TTAA | 1 cut(s) | 224 |
| Tru9I | TTAA | 1 cut(s) | 224 |
| TspDTI | ATGAA | 3 cut(s) | 68, 138, 233 |
| XapI | RAATTY | 1 cut(s) | 240 |
| XmnI | GAANNNNTTC | 1 cut(s) | 129 |