RLG00000018817

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0014768
Physical Location & Seq
Reverse (-)
36922130 .. 36927359
5230 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018817

Sequence Viewer

Length: 2010 bp
ATGTCATTTTATTCAAACGAACGTGTTAACAGCAGCCTCACTCTCTCTACCAAATCAGGCTGTTCTTGCTCCTGTGCTAATTGGTATGTCTCTCTCGTCTCAAAAAGCATCAGAAGTAAGGACATCAGGCTTGGCAGGGTTTTACACTCAAACTTCATCAAAACAGCTCTCACCTTTGACACCTTCCTGACCAACCGGCTCATTGATCTTTACTCCAAATGCAATGCCGTACAAGATGCCCAGAAGGCTTTCGACGACCTTCCAATGAAGAACGCCCATTCTTGGAACACCATGATATCCATGTACTCGAGAAATGGCATTTTTGACGATGCACGCCATTTGCTTGCTAAAATGATAGAACCAAATCTTGTGAGCTATAATACTTTGGTTTCTGGTTTAGCACGTCATGGGTATCATAAAGAATCCATATCTCTCTTCCAAAGGATGCAACAGGATTGTGAATGTTTATTCTTGGACCAGTTCACGTTTGTAAGCATAGTGGGGACTTGTGCTTGCTTAGGTGCATTGGCAATGTTGCGTCAAGTTCATGGGGTGGCGGTTGCAATTGGCTTGGAAATGAATATCATTGCTTGCAATTCTTTGGTCAATGCTTATGGAAAATGTGGTGAACCTGACACCTCATATTCTGTATTCAGTCGAATGCTAGAGAGGGACGTTGTGTCTTGGACCTCAATGATTGCTTCTTATGCACGGGCATCAAGAATGGATGACGCTTGTTGGGTATTTCATGGTATGCCTCTTAAGAACACAGTTTCTTGGACTGCTTTGATATCAGGTTTTGTACAAAGTGGGCATGGTAATTATGCTTTGGATCTTTTCCAGAAAATGCTGGAAGACAGGATCCAGCCTAGCACAGTTACATATGTTAGCATTTTGAGTGCTTGTGCAGATCTAGCACTTAATGAAAGAGGTAAGCAGATTCATGGGCATATCATTAGAAGTAATAATGAGAGCTACTTGTCCAATGTATTTATTTGTAATGCTCTAGTTGACATGTACAGCAAATGTGGGGACATGAAATCGGGAAAAACATTGTTTGAGATGATTCCTGAGAAGGATGTAATCTCGTGGAACTCTTTAATTACTGGATTTGCTCAGAATGGGCTGGGAGAGGAGTCACTTCTTGTTTTTAAGAGGATGGTAGAAACAAATGTGAAGCCTACTCATGTGACTTTTCTTTTGGTGTTATCTGCTTGTAGCCACACGGGTTTAGTTTCTGAAGGACTTCAAATTCTTCACTTGATGGAAAAGGGTTATGGTATTAAACCTAGATCAAGTCACTATGCAATTGTGATTGATTTGCTCGGGAGGAAAAATAAACTGAAGGAAGCGATGGAGTTGATTGAGAGAGCTCCTCATGCATCAGATCATATTGGGATGTGGGGTGCACTTTTGGCTGCTTGTCGAGTCCATGGGAACTTGGCCCTAGCTAGGAGGGCTGCAGAAGCTCTTTTTGAGTTGGAGCCCCACAATGGTGCAAGATATGTTATGTTATCAAACATTTATGCCGCAGCTGGTAGATGGGCTGATGCCCATAAGGTGAGAAGGCTCATGGAAGAAAGAGGTTTGACAAAAGAGTCAGCTTATAGTTTGATTGAGCTGAGAAATGCAAGGCATGAGTTTGTAGCGAAAGACAAGGTCCACTGTCAGACAGGAGAGATGAATGATACGATTGATGATATATTAGAACCAGCAGAAGAGGCTAGTCCACAAGCTAGTGTGGATGTTGCTGTTGCCCATTCTTTCTGTTTGGCACAGGCATTAGATGAGCGAATGTCAAATTGCCTTAATTTAATCTCAATGGAACCTCCACTCCCAGCAGATCTGAGAGGAAAAACTTTTCCTGCTCTTTTTGGAACATTGCAGATTGAATATGGCAAGCCAGCTCCATGGTTGTCTATGGAACACATCTATCATTTGAGCGCTATTCCCCTCACATGTGGGGACAATCTCTGCGCTGGAGTCCTAAGATGTTTTATCCTGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR

Protein Analysis

670

Amino Acids

74.39

Weight (kDa)

6.79

Isoelectric Point (pI)

42.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_1 PF12854 117 - 149 1.6e-06 PPR repeat
PPR PF01535 124 - 151 1.2e-06 PPR repeat
PPR_2 PF13041 255 - 303 1.3e-11 PPR repeat family
PPR_3 PF13812 256 - 303 4.4e-07 Pentatricopeptide repeat domain
PPR PF01535 258 - 287 4.5e-06 PPR repeat
PPR_2 PF13041 359 - 407 4.7e-09 PPR repeat family
PPR PF01535 362 - 389 1.3e-06 PPR repeat
E_motif PF20431 478 - 539 8.7e-15 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1597
AciI CCGC 2 cut(s) 557, 1530
AclWI GGATC 3 cut(s) 840, 856, 869
AcsI RAATTY 1 cut(s) 1251
AcuI CTGAAG 2 cut(s) 1260, 1364
AfaI GTAC 4 cut(s) 231, 305, 804, 1019
AfeI AGCGCT 1 cut(s) 1945
AfiI CCNNNNNNNGG 3 cut(s) 282, 1452, 1493
AflII CTTAAG 1 cut(s) 761
AflIII ACRYGT 3 cut(s) 22, 1014, 1958
AgsI TTSAA 3 cut(s) 15, 1250, 1892
AhdI GACNNNNNGTC 1 cut(s) 679
AjiI CACGTC 1 cut(s) 404
AleI CACNNNNGTG 1 cut(s) 1494
AloI GAACNNNNNNTCC 2 cut(s) 1818, 1850
Alw21I GWGCWC 2 cut(s) 1375, 1411
Alw26I GTCTC 2 cut(s) 94, 103
Alw44I GTGCAC 1 cut(s) 1407
AlwI GGATC 3 cut(s) 840, 856, 869
Ama87I CYCGRG 2 cut(s) 307, 1325
Aor51HI AGCGCT 1 cut(s) 1945
AoxI GGCC 1 cut(s) 1443
ApaLI GTGCAC 1 cut(s) 1407
ApeKI GCWGC 4 cut(s) 33, 1418, 1460, 1532
ApoI RAATTY 1 cut(s) 1251
ArsI GACNNNNNNTTYG 2 cut(s) 1183, 1215
Asp700I GAANNNNTTC 2 cut(s) 248, 1245
AspLEI GCGC 2 cut(s) 1946, 1979
AspS9I GGNCC 4 cut(s) 475, 687, 1444, 1660
AsuHPI GGTGA 3 cut(s) 163, 638, 1573
AvaI CYCGRG 2 cut(s) 307, 1325
AvaII GGWCC 3 cut(s) 475, 687, 1660
BaeGI GKGCMC 1 cut(s) 1411
BamHI GGATCC 1 cut(s) 861
BanII GRGCYC 2 cut(s) 1375, 1488
BauI CACGAG 1 cut(s) 1087
BbsI GAAGAC 1 cut(s) 861
Bbv12I GWGCWC 2 cut(s) 1375, 1411
BbvI GCAGC 4 cut(s) 45, 1405, 1447, 1544
BccI CCATC 4 cut(s) 1153, 1258, 1348, 1536
BceAI ACGGC 1 cut(s) 212
BcoDI GTCTC 2 cut(s) 94, 103
BfaI CTAG 9 cut(s) 665, 870, 914, 1007, 1290, 1448, 1452, 1725, 1737
BfmI CTRYAG 1 cut(s) 1461
BfoI RGCGCY 1 cut(s) 1947
BfrI CTTAAG 1 cut(s) 761
BglI GCCNNNNNGGC 1 cut(s) 245
BglII AGATCT 2 cut(s) 910, 1843
BisI GCNGC 5 cut(s) 34, 1419, 1461, 1530, 1533
BlsI GCNGC 5 cut(s) 35, 1420, 1462, 1531, 1534
Bme18I GGWCC 3 cut(s) 475, 687, 1660
BmeRI GACNNNNNGTC 1 cut(s) 679
BmeT110I CYCGRG 2 cut(s) 307, 1325
BmgBI CACGTC 1 cut(s) 404
BmgT120I GGNCC 4 cut(s) 475, 687, 1444, 1660
BmiI GGNNCC 3 cut(s) 863, 1485, 1827
BmsI GCATC 7 cut(s) 117, 226, 319, 435, 725, 1391, 1540
BpiI GAAGAC 1 cut(s) 861
BplI GAGNNNNNCTC 2 cut(s) 1360, 1392
BpmI CTGGAG 1 cut(s) 2001
Bpu10I CCTNAGC 1 cut(s) 517
BsaJI CCNNGG 2 cut(s) 1432, 1910
BsaXI ACNNNNNCTCC 2 cut(s) 1818, 1848
Bsc4I CCNNNNNNNGG 3 cut(s) 282, 1452, 1493
Bse118I RCCGGY 1 cut(s) 195
Bse1I ACTGG 2 cut(s) 478, 1111
Bse3DI GCAATG 4 cut(s) 229, 537, 585, 1880
BseDI CCNNGG 2 cut(s) 1432, 1910
BseGI GGATG 6 cut(s) 450, 733, 1084, 1164, 1404, 1750
BseLI CCNNNNNNNGG 3 cut(s) 282, 1452, 1493
BseMI GCAATG 4 cut(s) 229, 537, 585, 1880
BseMII CTCAG 4 cut(s) 1062, 1130, 1613, 1838
BseNI ACTGG 2 cut(s) 478, 1111
BseRI GAGGAG 2 cut(s) 1148, 1365
BseSI GKGCMC 1 cut(s) 1411
BseXI GCAGC 4 cut(s) 45, 1405, 1447, 1544
BseYI CCCAGC 2 cut(s) 1126, 1837
BsgI GTGCAG 1 cut(s) 927
BshFI GGCC 1 cut(s) 1445
BsiHKAI GWGCWC 2 cut(s) 1375, 1411
BsiHKCI CYCGRG 2 cut(s) 307, 1325
BsiSI CCGG 1 cut(s) 196
BslFI GGGAC 4 cut(s) 517, 686, 1046, 1979
BslI CCNNNNNNNGG 3 cut(s) 282, 1452, 1493
BsmAI GTCTC 2 cut(s) 94, 103
BsmBI CGTCTC 1 cut(s) 103
BsmFI GGGAC 4 cut(s) 517, 686, 1046, 1979
BsmI GAATGC 1 cut(s) 666
BsnI GGCC 1 cut(s) 1445
BsoBI CYCGRG 2 cut(s) 307, 1325
Bsp1286I GDGCHC 3 cut(s) 1375, 1411, 1488
Bsp1407I TGTACA 2 cut(s) 802, 1017
Bsp143I GATC 7 cut(s) 205, 832, 861, 910, 1292, 1387, 1843
Bsp19I CCATGG 2 cut(s) 1432, 1910
BspACI CCGC 2 cut(s) 557, 1530
BspANI GGCC 1 cut(s) 1445
BspCNI CTCAG 4 cut(s) 1063, 1129, 1614, 1839
BspLI GGNNCC 3 cut(s) 863, 1485, 1827
BspMAI CTGCAG 1 cut(s) 1465
BspPI GGATC 3 cut(s) 840, 856, 869
BspTI CTTAAG 1 cut(s) 761
BsrDI GCAATG 4 cut(s) 229, 537, 585, 1880
BsrFI RCCGGY 1 cut(s) 195
BsrGI TGTACA 2 cut(s) 802, 1017
BsrI ACTGG 2 cut(s) 478, 1111
BssAI RCCGGY 1 cut(s) 195
BssECI CCNNGG 2 cut(s) 1432, 1910
BssMI GATC 7 cut(s) 205, 832, 861, 910, 1292, 1387, 1843
BssSI CACGAG 1 cut(s) 1087
BssT1I CCWWGG 2 cut(s) 1432, 1910
Bst2BI CACGAG 1 cut(s) 1087
Bst4CI ACNGT 3 cut(s) 772, 877, 1667
Bst6I CTCTTC 2 cut(s) 440, 1713
BstAFI CTTAAG 1 cut(s) 761
BstAUI TGTACA 2 cut(s) 802, 1017
BstC8I GCNNGC 6 cut(s) 334, 345, 514, 592, 1901, 1905
BstDEI CTNAG 6 cut(s) 517, 1071, 1116, 1622, 1847, 1988
BstDSI CCRYGG 2 cut(s) 1432, 1910
BstF5I GGATG 6 cut(s) 450, 733, 1084, 1164, 1404, 1750
BstH2I RGCGCY 1 cut(s) 1947
BstHHI GCGC 2 cut(s) 1946, 1979
BstKTI GATC 7 cut(s) 208, 835, 864, 913, 1295, 1390, 1846
BstMAI GTCTC 2 cut(s) 94, 103
BstMBI GATC 7 cut(s) 205, 832, 861, 910, 1292, 1387, 1843
BstMWI GCNNNNNNNGC 9 cut(s) 66, 245, 707, 914, 1379, 1415, 1457, 1466, 1721
BstNSI RCATGY 2 cut(s) 1018, 1962
BstSFI CTRYAG 1 cut(s) 1461
BstSLI GKGCMC 1 cut(s) 1411
BstV1I GCAGC 4 cut(s) 45, 1405, 1447, 1544
BstV2I GAAGAC 1 cut(s) 861
BstX2I RGATCY 4 cut(s) 832, 861, 910, 1843
BstXI CCANNNNNNTGG 1 cut(s) 1911
BstYI RGATCY 4 cut(s) 832, 861, 910, 1843
BsuRI GGCC 1 cut(s) 1445
BtgI CCRYGG 2 cut(s) 1432, 1910
BtgZI GCGATG 1 cut(s) 1367
BtrI CACGTC 1 cut(s) 404
BtsCI GGATG 6 cut(s) 450, 733, 1084, 1164, 1404, 1750
BtsIMutI CAGTG 1 cut(s) 1663
Cac8I GCNNGC 6 cut(s) 334, 345, 514, 592, 1901, 1905
CfoI GCGC 2 cut(s) 1946, 1979
Cfr10I RCCGGY 1 cut(s) 195
Cfr13I GGNCC 4 cut(s) 475, 687, 1444, 1660
CseI GACGC 2 cut(s) 527, 740
Csp6I GTAC 4 cut(s) 230, 304, 803, 1018
CviQI GTAC 4 cut(s) 230, 304, 803, 1018
DdeI CTNAG 6 cut(s) 517, 1071, 1116, 1622, 1847, 1988
DpnI GATC 7 cut(s) 207, 834, 863, 912, 1294, 1389, 1845
DpnII GATC 7 cut(s) 205, 832, 861, 910, 1292, 1387, 1843
DrdI GACNNNNNNGTC 1 cut(s) 1597
DriI GACNNNNNGTC 1 cut(s) 679
DseDI GACNNNNNNGTC 1 cut(s) 1597
Eam1104I CTCTTC 2 cut(s) 440, 1713
Eam1105I GACNNNNNGTC 1 cut(s) 679
EarI CTCTTC 2 cut(s) 440, 1713
Ecl136II GAGCTC 1 cut(s) 1373
Eco130I CCWWGG 2 cut(s) 1432, 1910
Eco24I GRGCYC 2 cut(s) 1375, 1488
Eco32I GATATC 2 cut(s) 297, 792
Eco47I GGWCC 3 cut(s) 475, 687, 1660
Eco47III AGCGCT 1 cut(s) 1945
Eco53kI GAGCTC 1 cut(s) 1373
Eco57I CTGAAG 2 cut(s) 1260, 1364
Eco88I CYCGRG 2 cut(s) 307, 1325
EcoICRI GAGCTC 1 cut(s) 1373
EcoRV GATATC 2 cut(s) 297, 792
EcoT14I CCWWGG 2 cut(s) 1432, 1910
EcoT22I ATGCAT 1 cut(s) 1384
EcoT38I GRGCYC 2 cut(s) 1375, 1488
ErhI CCWWGG 2 cut(s) 1432, 1910
Esp3I CGTCTC 1 cut(s) 103
FaqI GGGAC 4 cut(s) 517, 686, 1046, 1979
FauNDI CATATG 1 cut(s) 883
Fnu4HI GCNGC 5 cut(s) 34, 1419, 1461, 1530, 1533
FokI GGATG 6 cut(s) 457, 740, 1091, 1171, 1411, 1757
FriOI GRGCYC 2 cut(s) 1375, 1488
Fsp4HI GCNGC 5 cut(s) 34, 1419, 1461, 1530, 1533
FspBI CTAG 9 cut(s) 665, 870, 914, 1007, 1290, 1448, 1452, 1725, 1737
GlaI GCGC 2 cut(s) 1945, 1978
GluI GCNGC 5 cut(s) 34, 1419, 1461, 1530, 1533
GsaI CCCAGC 2 cut(s) 1130, 1841
GsuI CTGGAG 1 cut(s) 2001
HaeII RGCGCY 1 cut(s) 1947
HaeIII GGCC 1 cut(s) 1445
HapII CCGG 1 cut(s) 196
HgaI GACGC 2 cut(s) 527, 740
HhaI GCGC 2 cut(s) 1946, 1979
Hin6I GCGC 2 cut(s) 1944, 1977
HinP1I GCGC 2 cut(s) 1944, 1977
HincII GTYRAC 2 cut(s) 28, 1012
HindII GTYRAC 2 cut(s) 28, 1012
HinfI GANTC 7 cut(s) 422, 940, 1066, 1136, 1428, 1598, 1983
HpaI GTTAAC 1 cut(s) 28
HpaII CCGG 1 cut(s) 196
HphI GGTGA 3 cut(s) 163, 638, 1573
Hpy166II GTNNAC 7 cut(s) 28, 483, 629, 1012, 1409, 1663, 1730
Hpy188I TCNGA 6 cut(s) 113, 1119, 1240, 1387, 1671, 1848
Hpy188III TCNNGA 7 cut(s) 187, 309, 720, 841, 1044, 1070, 1327
Hpy8I GTNNAC 7 cut(s) 28, 483, 629, 1012, 1409, 1663, 1730
Hpy99I CGWCG 1 cut(s) 257
HpyAV CCTTC 7 cut(s) 193, 238, 269, 1069, 1235, 1339, 1560
HpyCH4III ACNGT 3 cut(s) 772, 877, 1667
HpyCH4IV ACGT 4 cut(s) 22, 403, 485, 675
HpyF10VI GCNNNNNNNGC 9 cut(s) 66, 245, 707, 914, 1379, 1415, 1457, 1466, 1721
HpyF3I CTNAG 6 cut(s) 517, 1071, 1116, 1622, 1847, 1988
HpySE526I ACGT 4 cut(s) 22, 403, 485, 675
HspAI GCGC 2 cut(s) 1944, 1977
KspAI GTTAAC 1 cut(s) 28
Kzo9I GATC 7 cut(s) 205, 832, 861, 910, 1292, 1387, 1843
LmnI GCTCC 4 cut(s) 74, 1378, 1483, 1912
Lsp1109I GCAGC 4 cut(s) 45, 1405, 1447, 1544
LweI GCATC 7 cut(s) 117, 226, 319, 435, 725, 1391, 1540
MaeI CTAG 9 cut(s) 665, 870, 914, 1007, 1290, 1448, 1452, 1725, 1737
MaeII ACGT 4 cut(s) 22, 403, 485, 675
MaeIII GTNAC 4 cut(s) 877, 1137, 1189, 1298
MalI GATC 7 cut(s) 207, 834, 863, 912, 1294, 1389, 1845
MboI GATC 7 cut(s) 205, 832, 861, 910, 1292, 1387, 1843
MboII GAAGA 6 cut(s) 280, 427, 866, 1247, 1589, 1730
MfeI CAATTG 2 cut(s) 564, 1308
MflI RGATCY 4 cut(s) 832, 861, 910, 1843
MhlI GDGCHC 3 cut(s) 1375, 1411, 1488
MluCI AATT 9 cut(s) 79, 564, 595, 820, 1101, 1251, 1308, 1801, 1810
MlyI GAGTC 4 cut(s) 1145, 1437, 1607, 1992
MmeI TCCRAC 1 cut(s) 1461
Mph1103I ATGCAT 1 cut(s) 1384
MroXI GAANNNNTTC 2 cut(s) 248, 1245
MseI TTAA 8 cut(s) 27, 762, 921, 1100, 1152, 1284, 1809, 1814
MslI CAYNNNNRTG 1 cut(s) 1494
MspA1I CMGCKG 1 cut(s) 1535
MspCI CTTAAG 1 cut(s) 761
MspI CCGG 1 cut(s) 196
MunI CAATTG 2 cut(s) 564, 1308
Mva1269I GAATGC 1 cut(s) 666
MwoI GCNNNNNNNGC 9 cut(s) 66, 245, 707, 914, 1379, 1415, 1457, 1466, 1721
NcoI CCATGG 2 cut(s) 1432, 1910
NdeI CATATG 1 cut(s) 883
NdeII GATC 7 cut(s) 205, 832, 861, 910, 1292, 1387, 1843
NlaIV GGNNCC 3 cut(s) 863, 1485, 1827
NmuCI GTSAC 3 cut(s) 1137, 1189, 1298
NsiI ATGCAT 1 cut(s) 1384
NspI RCATGY 2 cut(s) 1018, 1962
OliI CACNNNNGTG 1 cut(s) 1494
PaeR7I CTCGAG 1 cut(s) 307
PciI ACATGT 2 cut(s) 1014, 1958
PctI GAATGC 1 cut(s) 666
PdmI GAANNNNTTC 2 cut(s) 248, 1245
PfeI GAWTC 3 cut(s) 422, 940, 1066
PflFI GACNNNGTC 1 cut(s) 1658
PkrI GCNGC 5 cut(s) 35, 1420, 1462, 1531, 1534
PleI GAGTC 4 cut(s) 1144, 1436, 1606, 1991
PpsI GAGTC 4 cut(s) 1144, 1436, 1606, 1991
PscI ACATGT 2 cut(s) 1014, 1958
Psp124BI GAGCTC 1 cut(s) 1375
PspFI CCCAGC 2 cut(s) 1126, 1837
PspN4I GGNNCC 3 cut(s) 863, 1485, 1827
PspPI GGNCC 4 cut(s) 475, 687, 1444, 1660
PstI CTGCAG 1 cut(s) 1465
PsuI RGATCY 4 cut(s) 832, 861, 910, 1843
PsyI GACNNNGTC 1 cut(s) 1658
PvuII CAGCTG 1 cut(s) 1535
RsaI GTAC 4 cut(s) 231, 305, 804, 1019
RsaNI GTAC 4 cut(s) 230, 304, 803, 1018
RseI CAYNNNNRTG 1 cut(s) 1494
SacI GAGCTC 1 cut(s) 1375
SaqAI TTAA 8 cut(s) 27, 762, 921, 1100, 1152, 1284, 1809, 1814
SatI GCNGC 5 cut(s) 34, 1419, 1461, 1530, 1533
Sau3AI GATC 7 cut(s) 205, 832, 861, 910, 1292, 1387, 1843
Sau96I GGNCC 4 cut(s) 475, 687, 1444, 1660
SchI GAGTC 4 cut(s) 1145, 1437, 1607, 1992
SduI GDGCHC 3 cut(s) 1375, 1411, 1488
SfaNI GCATC 7 cut(s) 117, 226, 319, 435, 725, 1391, 1540
SfcI CTRYAG 1 cut(s) 1461
Sfr274I CTCGAG 1 cut(s) 307
SinI GGWCC 3 cut(s) 475, 687, 1660
SlaI CTCGAG 1 cut(s) 307
SmiMI CAYNNNNRTG 1 cut(s) 1494
SmlI CTYRAG 2 cut(s) 307, 761
SmoI CTYRAG 2 cut(s) 307, 761
Sse9I AATT 9 cut(s) 79, 564, 595, 820, 1101, 1251, 1308, 1801, 1810
SsiI CCGC 2 cut(s) 557, 1530
SspMI CTAG 9 cut(s) 665, 870, 914, 1007, 1290, 1448, 1452, 1725, 1737
SstI GAGCTC 1 cut(s) 1375
StyI CCWWGG 2 cut(s) 1432, 1910
TaaI ACNGT 3 cut(s) 772, 877, 1667
TaiI ACGT 4 cut(s) 25, 406, 488, 678
TaqI TCGA 4 cut(s) 252, 308, 658, 1426
TasI AATT 9 cut(s) 79, 564, 595, 820, 1101, 1251, 1308, 1801, 1810
TatI WGTACW 3 cut(s) 303, 802, 1017
TauI GCSGC 1 cut(s) 1532
TfiI GAWTC 3 cut(s) 422, 940, 1066
Tru1I TTAA 8 cut(s) 27, 762, 921, 1100, 1152, 1284, 1809, 1814
Tru9I TTAA 8 cut(s) 27, 762, 921, 1100, 1152, 1284, 1809, 1814
TscAI CASTG 1 cut(s) 1670
TseFI GTSAC 3 cut(s) 1137, 1189, 1298
TseI GCWGC 4 cut(s) 33, 1418, 1460, 1532
Tsp45I GTSAC 3 cut(s) 1137, 1189, 1298
TspDTI ATGAA 9 cut(s) 145, 281, 536, 593, 737, 932, 939, 1052, 1697
TspRI CASTG 1 cut(s) 1670
Tth111I GACNNNGTC 1 cut(s) 1658
Vha464I CTTAAG 1 cut(s) 761
VneI GTGCAC 1 cut(s) 1407
VpaK11BI GGWCC 3 cut(s) 475, 687, 1660
XapI RAATTY 1 cut(s) 1251
XceI RCATGY 2 cut(s) 1018, 1962
XhoI CTCGAG 1 cut(s) 307
XmnI GAANNNNTTC 2 cut(s) 248, 1245
XspI CTAG 9 cut(s) 665, 870, 914, 1007, 1290, 1448, 1452, 1725, 1737
Zsp2I ATGCAT 1 cut(s) 1384
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.