Rroxscaffold_2G00119700

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0014768
Physical Location & Seq
Forward (+)
51660607 .. 51663837
3231 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00119700.1

Sequence Viewer

Length: 1878 bp
ATGAAAATTGCGGTTATTACACTTTCTTTCTATTATATGGAATCTCAAAGCAAACCTTTGAGGGAACAAAAACTATTAAGAGATGAGAAAGAGATAGAGAAGATACCTTTCCGGAGAGGGCGTAAGAGGTGGTGGAGAGCTATGGAGACCGCGGAGGCTATTATTTTGGGTGTTTGGCGGGAACGAATCCAGGATGAGAATTGGGTTGTGCAATTCTTCCGGTATGTCTCTCTCGTGTCGAAAAGCATCAGAAGTAAGGACATCAGGCTTGGCAGGGTTTTACACTCAAACTTCATCAAAACAGCTCTCACCCTCGACACCTTCCTGACCAACCGGCTCATTGATCTTTACTCCAAATGCAATGCCATACAAGATGCCCAAAAGGCTTTCGACGACCTTCCAACAAAGAACACCCATTCTTGGAACACCCTGATATCCATGTACTCGAGAAATGGCATTTTTGACAATGCACGCCATTTGCTTGCTAAAATGACAGAACCAAATCTTGTGAGCTATAATACTTTGGTTTCTGGTTTAGCACGTCATGGGTATCATAAAGAATCCATATCTCTCTTCCAAAGGATGCAACAGGATTGTGAGTGTTTATTCTTGGACCAGTTCACGTTTGTAAGCATAGTGGGGACTTGTGCTTGCTTAGGTGCATTGGCAATGTTGCGTCAAGTTCATGGGGTGGCGATTGCAATTGGCTTGGAAATGAATATCATTGCTTGCAATTCTTTGGTCAATGCTTATGGAAAATGTGGTGAACCAGACACCTCATATTCTGTATTCAGTCGAATGCTAGAGAGGGACGTTGTGTCTTGGACCTCAATGATTGCTTCTTATGCACGGGCATCAAGAATGGATGACGCTTGTTGGGTATTTCATGGTATGCCTCTTAAGAACACAGTTTCTTGGACTGCTTTGATATCAGGTTTTGTACAAAGTGGGCATGGTAATTATGCTTTGGATCTTTTCCAGAAAATGCTGGAAGAGAGGATTCAGCCTAGCACAGTTACATATGTTAGCATTTTGAGTGCTTCTGCAGATCTAGCACTTAATGAAAGAGGTAAGCAGATTCATGGGCATATCATTAGAAGTAATAATGGAAGCTACTTGTCCAATTTATTTATTTGTAATGCTCTAGTTGACATGTACAGCAAATGTGGGGACATGAAATCGGGAAAAACATTGTTTGAGATGATTCCTCAGAAGGATGTAATCTCTTGGAACTCTTTAATTACTGGATTTGCTCAGAATGGGCTGGGAGAGGAGTCACTTCTTGTTTTTAAGAGGATGGTAGAAACAAATGTGAAGCCTACTCATGTGACTTTTCTTTTGGTGTTATCTGCTTGTAGCCACACAGGTTTAGTTTCTGAAGGACTTCAAATTCTGCACTTAATGGAAAAGGGTTATGGTATTAAACCTAGGTCAAGTCACTATGCAATTGTGATTGATTTGCTCGGGAGGAAAAATAAACTGAAGGAAGCAATGGAGTTGATTGAGAGAGCTCCTCATGCATCAGATCATATTGGGATGTGGGGTGCACTTTTGGCTGCTTGTCGAGTCCATGGGAACTTGGCCCTAGCTAGGAGGGCTGCAGAAGCTCTTTTTGAGTTGGAGCCCCACAATGGTGCAAGATATGTTATGTTATCAAACATTTATGCCGCAGCTGGTAGATGGGCTGATGCCCATAAGGTCAGAAGGCTCATGGAAGAAAGAGGTTTGACAAAAGAGTCAGCTTATAGTTTAATTGAGCTGAGAAATGCAAGGCATGAGTTTGTAGCAAAAGACAAGGTCCACTGTCAGACAGGAGAGATGAATGATATGATTGGTAAATTAGCAGACCATATGAAGGATGTAGGCAATCTTCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR

Protein Analysis

625

Amino Acids

70.66

Weight (kDa)

8.98

Isoelectric Point (pI)

39.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR PF01535 170 - 197 1.1e-06 PPR repeat
PPR_2 PF13041 301 - 347 9.1e-11 PPR repeat family
PPR_3 PF13812 302 - 347 3.9e-06 Pentatricopeptide repeat domain
PPR PF01535 304 - 333 3.8e-06 PPR repeat
PPR_2 PF13041 405 - 453 4.3e-09 PPR repeat family
PPR PF01535 408 - 435 1.2e-06 PPR repeat
E_motif PF20431 524 - 585 7.9e-15 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1735
AccII CGCG 1 cut(s) 152
AccIII TCCGGA 1 cut(s) 111
AciI CCGC 5 cut(s) 11, 150, 152, 178, 1668
AclWI GGATC 1 cut(s) 978
AcsI RAATTY 1 cut(s) 1389
AcuI CTGAAG 2 cut(s) 1398, 1502
AfaI GTAC 3 cut(s) 443, 942, 1157
AfiI CCNNNNNNNGG 4 cut(s) 420, 1590, 1631, 1855
AflII CTTAAG 1 cut(s) 899
AflIII ACRYGT 1 cut(s) 1152
AgsI TTSAA 1 cut(s) 1388
AhdI GACNNNNNGTC 1 cut(s) 817
AjiI CACGTC 1 cut(s) 542
AjnI CCWGG 1 cut(s) 189
AleI CACNNNNGTG 1 cut(s) 1632
Alw21I GWGCWC 2 cut(s) 1513, 1549
Alw26I GTCTC 2 cut(s) 140, 232
Alw44I GTGCAC 1 cut(s) 1545
AlwI GGATC 1 cut(s) 978
Ama87I CYCGRG 2 cut(s) 445, 1463
Aor13HI TCCGGA 1 cut(s) 111
AoxI GGCC 1 cut(s) 1581
ApaLI GTGCAC 1 cut(s) 1545
ApeKI GCWGC 3 cut(s) 1556, 1598, 1670
ApoI RAATTY 1 cut(s) 1389
ArsI GACNNNNNNTTYG 2 cut(s) 1321, 1353
Asp700I GAANNNNTTC 1 cut(s) 1383
AspA2I CCTAGG 1 cut(s) 1427
AspS9I GGNCC 4 cut(s) 613, 825, 1582, 1798
AsuHPI GGTGA 2 cut(s) 301, 776
AvaI CYCGRG 2 cut(s) 445, 1463
AvaII GGWCC 3 cut(s) 613, 825, 1798
AvrII CCTAGG 1 cut(s) 1427
BaeGI GKGCMC 1 cut(s) 1549
BanII GRGCYC 2 cut(s) 1513, 1626
BarI GAAGNNNNNNTAC 1 cut(s) 1854
BauI CACGAG 1 cut(s) 233
Bbv12I GWGCWC 2 cut(s) 1513, 1549
BbvI GCAGC 3 cut(s) 1543, 1585, 1682
BccI CCATC 2 cut(s) 1291, 1674
BciT130I CCWGG 1 cut(s) 191
BcoDI GTCTC 2 cut(s) 140, 232
BfaI CTAG 7 cut(s) 803, 1008, 1052, 1145, 1428, 1586, 1590
BfmI CTRYAG 2 cut(s) 1044, 1599
BfrI CTTAAG 1 cut(s) 899
BglI GCCNNNNNGGC 1 cut(s) 383
BglII AGATCT 1 cut(s) 1048
BisI GCNGC 4 cut(s) 1557, 1599, 1668, 1671
BlnI CCTAGG 1 cut(s) 1427
BlsI GCNGC 4 cut(s) 1558, 1600, 1669, 1672
Bme1390I CCNGG 1 cut(s) 191
Bme18I GGWCC 3 cut(s) 613, 825, 1798
BmeRI GACNNNNNGTC 1 cut(s) 817
BmeT110I CYCGRG 2 cut(s) 445, 1463
BmgBI CACGTC 1 cut(s) 542
BmgT120I GGNCC 4 cut(s) 613, 825, 1582, 1798
BmiI GGNNCC 1 cut(s) 1623
BmrFI CCNGG 1 cut(s) 191
BmsI GCATC 6 cut(s) 255, 364, 573, 863, 1529, 1678
BplI GAGNNNNNCTC 2 cut(s) 1498, 1530
Bpu10I CCTNAGC 1 cut(s) 655
BsaI GGTCTC 1 cut(s) 140
BsaJI CCNNGG 3 cut(s) 150, 1427, 1570
BsaWI WCCGGW 2 cut(s) 111, 219
BsaXI ACNNNNNCTCC 2 cut(s) 106, 136
Bsc4I CCNNNNNNNGG 4 cut(s) 420, 1590, 1631, 1855
Bse118I RCCGGY 1 cut(s) 333
Bse1I ACTGG 2 cut(s) 616, 1249
Bse3DI GCAATG 4 cut(s) 367, 675, 723, 1497
BseAI TCCGGA 1 cut(s) 111
BseBI CCWGG 1 cut(s) 191
BseDI CCNNGG 3 cut(s) 150, 1427, 1570
BseGI GGATG 7 cut(s) 199, 588, 871, 1222, 1302, 1542, 1864
BseLI CCNNNNNNNGG 4 cut(s) 420, 1590, 1631, 1855
BseMI GCAATG 4 cut(s) 367, 675, 723, 1497
BseMII CTCAG 3 cut(s) 1223, 1268, 1751
BseNI ACTGG 2 cut(s) 616, 1249
BseRI GAGGAG 2 cut(s) 1286, 1503
BseSI GKGCMC 1 cut(s) 1549
BseXI GCAGC 3 cut(s) 1543, 1585, 1682
BseYI CCCAGC 1 cut(s) 1264
BsgI GTGCAG 1 cut(s) 1379
Bsh1236I CGCG 1 cut(s) 152
BshFI GGCC 1 cut(s) 1583
BsiHKAI GWGCWC 2 cut(s) 1513, 1549
BsiHKCI CYCGRG 2 cut(s) 445, 1463
BsiSI CCGG 3 cut(s) 112, 220, 334
BslFI GGGAC 3 cut(s) 655, 824, 1184
BslI CCNNNNNNNGG 4 cut(s) 420, 1590, 1631, 1855
BsmAI GTCTC 2 cut(s) 140, 232
BsmFI GGGAC 3 cut(s) 655, 824, 1184
BsmI GAATGC 1 cut(s) 804
BsnI GGCC 1 cut(s) 1583
Bso31I GGTCTC 1 cut(s) 140
BsoBI CYCGRG 2 cut(s) 445, 1463
Bsp1286I GDGCHC 3 cut(s) 1513, 1549, 1626
Bsp13I TCCGGA 1 cut(s) 111
Bsp1407I TGTACA 2 cut(s) 940, 1155
Bsp143I GATC 4 cut(s) 343, 970, 1048, 1525
Bsp19I CCATGG 1 cut(s) 1570
BspACI CCGC 5 cut(s) 11, 150, 152, 178, 1668
BspANI GGCC 1 cut(s) 1583
BspCNI CTCAG 3 cut(s) 1222, 1267, 1752
BspEI TCCGGA 1 cut(s) 111
BspFNI CGCG 1 cut(s) 152
BspLI GGNNCC 1 cut(s) 1623
BspMAI CTGCAG 2 cut(s) 1048, 1603
BspPI GGATC 1 cut(s) 978
BspTI CTTAAG 1 cut(s) 899
BspTNI GGTCTC 1 cut(s) 140
BsrDI GCAATG 4 cut(s) 367, 675, 723, 1497
BsrFI RCCGGY 1 cut(s) 333
BsrGI TGTACA 2 cut(s) 940, 1155
BsrI ACTGG 2 cut(s) 616, 1249
BssAI RCCGGY 1 cut(s) 333
BssECI CCNNGG 3 cut(s) 150, 1427, 1570
BssMI GATC 4 cut(s) 343, 970, 1048, 1525
BssSI CACGAG 1 cut(s) 233
BssT1I CCWWGG 2 cut(s) 1427, 1570
Bst2BI CACGAG 1 cut(s) 233
Bst2UI CCWGG 1 cut(s) 191
Bst4CI ACNGT 3 cut(s) 910, 1015, 1805
Bst6I CTCTTC 2 cut(s) 578, 987
BstAFI CTTAAG 1 cut(s) 899
BstAUI TGTACA 2 cut(s) 940, 1155
BstC8I GCNNGC 4 cut(s) 472, 483, 652, 730
BstDEI CTNAG 5 cut(s) 655, 1209, 1254, 1760, 1875
BstDSI CCRYGG 2 cut(s) 150, 1570
BstF5I GGATG 7 cut(s) 199, 588, 871, 1222, 1302, 1542, 1864
BstFNI CGCG 1 cut(s) 152
BstKTI GATC 4 cut(s) 346, 973, 1051, 1528
BstMAI GTCTC 2 cut(s) 140, 232
BstMBI GATC 4 cut(s) 343, 970, 1048, 1525
BstMWI GCNNNNNNNGC 7 cut(s) 383, 845, 1052, 1517, 1553, 1595, 1604
BstNI CCWGG 1 cut(s) 191
BstNSI RCATGY 1 cut(s) 1156
BstSCI CCNGG 1 cut(s) 189
BstSFI CTRYAG 2 cut(s) 1044, 1599
BstSLI GKGCMC 1 cut(s) 1549
BstUI CGCG 1 cut(s) 152
BstV1I GCAGC 3 cut(s) 1543, 1585, 1682
BstX2I RGATCY 2 cut(s) 970, 1048
BstYI RGATCY 2 cut(s) 970, 1048
BsuRI GGCC 1 cut(s) 1583
BtgI CCRYGG 2 cut(s) 150, 1570
BtrI CACGTC 1 cut(s) 542
BtsCI GGATG 7 cut(s) 199, 588, 871, 1222, 1302, 1542, 1864
BtsIMutI CAGTG 1 cut(s) 1801
Cac8I GCNNGC 4 cut(s) 472, 483, 652, 730
Cfr10I RCCGGY 1 cut(s) 333
Cfr13I GGNCC 4 cut(s) 613, 825, 1582, 1798
Cfr42I CCGCGG 1 cut(s) 153
CseI GACGC 2 cut(s) 665, 878
Csp6I GTAC 3 cut(s) 442, 941, 1156
CviQI GTAC 3 cut(s) 442, 941, 1156
DdeI CTNAG 5 cut(s) 655, 1209, 1254, 1760, 1875
DpnI GATC 4 cut(s) 345, 972, 1050, 1527
DpnII GATC 4 cut(s) 343, 970, 1048, 1525
DrdI GACNNNNNNGTC 1 cut(s) 1735
DriI GACNNNNNGTC 1 cut(s) 817
DseDI GACNNNNNNGTC 1 cut(s) 1735
Eam1104I CTCTTC 2 cut(s) 578, 987
Eam1105I GACNNNNNGTC 1 cut(s) 817
EarI CTCTTC 2 cut(s) 578, 987
Ecl136II GAGCTC 1 cut(s) 1511
Eco130I CCWWGG 2 cut(s) 1427, 1570
Eco24I GRGCYC 2 cut(s) 1513, 1626
Eco31I GGTCTC 1 cut(s) 140
Eco32I GATATC 2 cut(s) 435, 930
Eco47I GGWCC 3 cut(s) 613, 825, 1798
Eco53kI GAGCTC 1 cut(s) 1511
Eco57I CTGAAG 2 cut(s) 1398, 1502
Eco88I CYCGRG 2 cut(s) 445, 1463
EcoICRI GAGCTC 1 cut(s) 1511
EcoRII CCWGG 1 cut(s) 189
EcoRV GATATC 2 cut(s) 435, 930
EcoT14I CCWWGG 2 cut(s) 1427, 1570
EcoT22I ATGCAT 1 cut(s) 1522
EcoT38I GRGCYC 2 cut(s) 1513, 1626
ErhI CCWWGG 2 cut(s) 1427, 1570
FalI AAGNNNNNCTT 2 cut(s) 40, 72
FaqI GGGAC 3 cut(s) 655, 824, 1184
FauI CCCGC 1 cut(s) 171
FauNDI CATATG 2 cut(s) 1021, 1851
Fnu4HI GCNGC 4 cut(s) 1557, 1599, 1668, 1671
FokI GGATG 7 cut(s) 206, 595, 878, 1229, 1309, 1549, 1871
FriOI GRGCYC 2 cut(s) 1513, 1626
Fsp4HI GCNGC 4 cut(s) 1557, 1599, 1668, 1671
FspBI CTAG 7 cut(s) 803, 1008, 1052, 1145, 1428, 1586, 1590
GluI GCNGC 4 cut(s) 1557, 1599, 1668, 1671
GsaI CCCAGC 1 cut(s) 1268
HaeIII GGCC 1 cut(s) 1583
HapII CCGG 3 cut(s) 112, 220, 334
HgaI GACGC 2 cut(s) 665, 878
HincII GTYRAC 1 cut(s) 1150
HindII GTYRAC 1 cut(s) 1150
HinfI GANTC 9 cut(s) 41, 186, 560, 1000, 1078, 1204, 1274, 1566, 1736
HpaII CCGG 3 cut(s) 112, 220, 334
HphI GGTGA 2 cut(s) 301, 776
Hpy166II GTNNAC 5 cut(s) 621, 767, 1150, 1547, 1801
Hpy188I TCNGA 7 cut(s) 251, 1212, 1257, 1378, 1525, 1703, 1809
Hpy188III TCNNGA 7 cut(s) 112, 325, 447, 858, 979, 1182, 1465
Hpy8I GTNNAC 5 cut(s) 621, 767, 1150, 1547, 1801
Hpy99I CGWCG 1 cut(s) 395
HpyAV CCTTC 7 cut(s) 331, 407, 1207, 1373, 1477, 1698, 1849
HpyCH4III ACNGT 3 cut(s) 910, 1015, 1805
HpyCH4IV ACGT 3 cut(s) 541, 623, 813
HpyF10VI GCNNNNNNNGC 7 cut(s) 383, 845, 1052, 1517, 1553, 1595, 1604
HpyF3I CTNAG 5 cut(s) 655, 1209, 1254, 1760, 1875
HpySE526I ACGT 3 cut(s) 541, 623, 813
Kpn2I TCCGGA 1 cut(s) 111
KspI CCGCGG 1 cut(s) 153
Kzo9I GATC 4 cut(s) 343, 970, 1048, 1525
LmnI GCTCC 2 cut(s) 1516, 1621
Lsp1109I GCAGC 3 cut(s) 1543, 1585, 1682
LweI GCATC 6 cut(s) 255, 364, 573, 863, 1529, 1678
MaeI CTAG 7 cut(s) 803, 1008, 1052, 1145, 1428, 1586, 1590
MaeII ACGT 3 cut(s) 541, 623, 813
MaeIII GTNAC 4 cut(s) 1015, 1275, 1327, 1436
MalI GATC 4 cut(s) 345, 972, 1050, 1527
MboI GATC 4 cut(s) 343, 970, 1048, 1525
MboII GAAGA 6 cut(s) 112, 208, 565, 1004, 1727, 1862
MfeI CAATTG 2 cut(s) 702, 1446
MflI RGATCY 2 cut(s) 970, 1048
MhlI GDGCHC 3 cut(s) 1513, 1549, 1626
MlyI GAGTC 3 cut(s) 1283, 1575, 1745
MmeI TCCRAC 2 cut(s) 425, 1599
Mph1103I ATGCAT 1 cut(s) 1522
MroI TCCGGA 1 cut(s) 111
MroXI GAANNNNTTC 1 cut(s) 1383
MseI TTAA 8 cut(s) 77, 900, 1059, 1238, 1290, 1400, 1422, 1751
MslI CAYNNNNRTG 1 cut(s) 1632
MspA1I CMGCKG 2 cut(s) 152, 1673
MspCI CTTAAG 1 cut(s) 899
MspI CCGG 3 cut(s) 112, 220, 334
MspR9I CCNGG 1 cut(s) 191
MunI CAATTG 2 cut(s) 702, 1446
Mva1269I GAATGC 1 cut(s) 804
MvaI CCWGG 1 cut(s) 191
MvnI CGCG 1 cut(s) 152
MwoI GCNNNNNNNGC 7 cut(s) 383, 845, 1052, 1517, 1553, 1595, 1604
NcoI CCATGG 1 cut(s) 1570
NdeI CATATG 2 cut(s) 1021, 1851
NdeII GATC 4 cut(s) 343, 970, 1048, 1525
NlaIV GGNNCC 1 cut(s) 1623
NmuCI GTSAC 3 cut(s) 1275, 1327, 1436
NsiI ATGCAT 1 cut(s) 1522
NspI RCATGY 1 cut(s) 1156
OliI CACNNNNGTG 1 cut(s) 1632
PaeR7I CTCGAG 1 cut(s) 445
PciI ACATGT 1 cut(s) 1152
PctI GAATGC 1 cut(s) 804
PdmI GAANNNNTTC 1 cut(s) 1383
PfeI GAWTC 6 cut(s) 41, 186, 560, 1000, 1078, 1204
PflFI GACNNNGTC 1 cut(s) 1796
PfoI TCCNGGA 1 cut(s) 189
PkrI GCNGC 4 cut(s) 1558, 1600, 1669, 1672
PleI GAGTC 3 cut(s) 1282, 1574, 1744
PpsI GAGTC 3 cut(s) 1282, 1574, 1744
PscI ACATGT 1 cut(s) 1152
Psp124BI GAGCTC 1 cut(s) 1513
Psp6I CCWGG 1 cut(s) 189
PspFI CCCAGC 1 cut(s) 1264
PspGI CCWGG 1 cut(s) 189
PspN4I GGNNCC 1 cut(s) 1623
PspPI GGNCC 4 cut(s) 613, 825, 1582, 1798
PstI CTGCAG 2 cut(s) 1048, 1603
PsuI RGATCY 2 cut(s) 970, 1048
PsyI GACNNNGTC 1 cut(s) 1796
PvuII CAGCTG 1 cut(s) 1673
RsaI GTAC 3 cut(s) 443, 942, 1157
RsaNI GTAC 3 cut(s) 442, 941, 1156
RseI CAYNNNNRTG 1 cut(s) 1632
SacI GAGCTC 1 cut(s) 1513
SacII CCGCGG 1 cut(s) 153
SaqAI TTAA 8 cut(s) 77, 900, 1059, 1238, 1290, 1400, 1422, 1751
SatI GCNGC 4 cut(s) 1557, 1599, 1668, 1671
Sau3AI GATC 4 cut(s) 343, 970, 1048, 1525
Sau96I GGNCC 4 cut(s) 613, 825, 1582, 1798
SchI GAGTC 3 cut(s) 1283, 1575, 1745
ScrFI CCNGG 1 cut(s) 191
SduI GDGCHC 3 cut(s) 1513, 1549, 1626
SfaNI GCATC 6 cut(s) 255, 364, 573, 863, 1529, 1678
SfcI CTRYAG 2 cut(s) 1044, 1599
Sfr274I CTCGAG 1 cut(s) 445
Sfr303I CCGCGG 1 cut(s) 153
SgrBI CCGCGG 1 cut(s) 153
SinI GGWCC 3 cut(s) 613, 825, 1798
SlaI CTCGAG 1 cut(s) 445
SmiMI CAYNNNNRTG 1 cut(s) 1632
SmlI CTYRAG 2 cut(s) 445, 899
SmoI CTYRAG 2 cut(s) 445, 899
SsiI CCGC 5 cut(s) 11, 150, 152, 178, 1668
SspMI CTAG 7 cut(s) 803, 1008, 1052, 1145, 1428, 1586, 1590
SstI GAGCTC 1 cut(s) 1513
StyD4I CCNGG 1 cut(s) 189
StyI CCWWGG 2 cut(s) 1427, 1570
TaaI ACNGT 3 cut(s) 910, 1015, 1805
TaiI ACGT 3 cut(s) 544, 626, 816
TaqI TCGA 6 cut(s) 239, 315, 390, 446, 796, 1564
TatI WGTACW 3 cut(s) 441, 940, 1155
TauI GCSGC 1 cut(s) 1670
TfiI GAWTC 6 cut(s) 41, 186, 560, 1000, 1078, 1204
Tru1I TTAA 8 cut(s) 77, 900, 1059, 1238, 1290, 1400, 1422, 1751
Tru9I TTAA 8 cut(s) 77, 900, 1059, 1238, 1290, 1400, 1422, 1751
TscAI CASTG 1 cut(s) 1808
TseFI GTSAC 3 cut(s) 1275, 1327, 1436
TseI GCWGC 3 cut(s) 1556, 1598, 1670
Tsp45I GTSAC 3 cut(s) 1275, 1327, 1436
TspRI CASTG 1 cut(s) 1808
Tth111I GACNNNGTC 1 cut(s) 1796
Vha464I CTTAAG 1 cut(s) 899
VneI GTGCAC 1 cut(s) 1545
VpaK11BI GGWCC 3 cut(s) 613, 825, 1798
XapI RAATTY 1 cut(s) 1389
XceI RCATGY 1 cut(s) 1156
XhoI CTCGAG 1 cut(s) 445
XmaJI CCTAGG 1 cut(s) 1427
XmnI GAANNNNTTC 1 cut(s) 1383
XspI CTAG 7 cut(s) 803, 1008, 1052, 1145, 1428, 1586, 1590
Zsp2I ATGCAT 1 cut(s) 1522
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.