RLG00000020038

ZINC FINGER protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0006445
Physical Location & Seq
Reverse (-)
60381320 .. 60383309
1990 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020038

Sequence Viewer

Length: 1593 bp
ATGAAAGCTTTGCAATTTCAACAGCAACAACAGGTGGATGAGAGCATGTCTAATTTAACTTCAGCTTCTGGTGACCAAGCTAGTGTCTCTTCTGGAAACAGATCAACTGAAATCGGCACCAGTAGCTTTTCTCAGCAGTATTTTCCTCCACCGCCGCCTCACGCGAATAGTCAAGGTGTGAAAAGGAAGAGAAACCAGCCAGGAAACCCAGACCCAGATGCAGAAGTGATAGCTTTGTCTCCCAAGACCCTCATGGCAACAAACAGATTCATATGTGAGATCTGCAACAAAGGGTTTCAGAGGGATCAGAATCTTCAGCTCCACAGAAGAGGGCACAATTTGCCATGGAAGCTAAAGCAGAGAACAAGCAAAGAGGTGAGGAAGAAAGTATATGTGTGCCCAGAAGCCAGCTGTGTGCACCATGACCCTTCAAGAGCTCTTGGGGACTTGACTGGGATCAAGAAGCACTTTTTCAGGAAGCACGGTGAGAAGAAGTGGAAATGTGAGAAGTGCTCAAAGAAGTATGCGGTTCAATCAGATTGGAAAGCCCATTCAAAGACCTGTGGCACCAGAGAGTACAGATGTGACTGTGGAACTCTCTTCTCGAGAAGGGACAGTTTCATCACCCACAGAGCTTTCTGTGATGCTTTAGCAGAAGAGAGTGCAAGAGCCATAAACCCAACACCACTGCAAACCCTCTCTTCTCCTCCTCCTCAGCCTCAAAATCATATGAACCTCATGGGTGGTGGTCCCCACATTAATTTCAACTCCCATGGCCATGACCTCCATGCATACAGTGCATTCATGAAGAAGGAGCACAATGATCATCAGCAAATTAGCAGCTTCAGTTCCACCAACAGTCTCTTACCACCTTGGCTTGCTTCTGGCCCACCACCCAGTGCTACCTCTATCTTCTCTGGAAATCAGGATCATCATCATCATCATCATCACGATTTCCAGCAGAACCTGGAGTTGGGTCCAAACCCTAACCCTAGCTTGGGCCCCACTCTCCCTCAATTCCAGGTGCCTGCTGCCGCAGCAGCCTTGTCATCCCCACCTCACATGTCAGCCACTGCATTGCTGCAGAAGGCAGCCCAGATGGGAGCGACAATGAGCAGCAGCAGCACCTCCTCAGGCTCGGTCTCAGTGCCAGCTGGCGTCATGGCGCGGGCCCACCTGTCTGACTTCGGGGGTCACGTGTCAGCTGCCGGCAACGGCATTGGTGGAGGAGCAGGAGGAGGTAGTGTTCATCATCAACAACAGCAGCAGCAAGCCAGCTCTCTTTTGCATGACATGATGAACTCTCTGTCTTCAGGTACTGGGTTTGAAGGGACCTCGTTCGAGGACGCCTTCGGTGGCATTTTGGGGACCTCGAAGAGCAAAGACGGGAGTCGGAGTGGCGGAGCTGAAGAAAATGGTGGCGTTGGTGGTGGGGAAGGTTTGACCAGAGATTTCTTGGGGCTAAAAGCACTGTCGCACAGTGACATGATGCTTAATATCGCTGGTCTGGGAAACTGCGTAAGCAACAACAATAGTAGTTCGACCCGTGACTTGCAGAATCAAGTACCACAAAAACCTAATTGGCAGGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2_jaz zf-met

Protein Analysis

531

Amino Acids

56.97

Weight (kDa)

8.96

Isoelectric Point (pI)

48.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2H2-2nd_BIRD-IDD PF22996 127 - 161 6.3e-22 BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD PF22995 165 - 189 1.4e-14 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 192 - 227 2.4e-24 BIRD-IDD transcription factor, fourth C2HC zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 116, 566, 1024
AccII CGCG 2 cut(s) 164, 1168
AciI CCGC 6 cut(s) 152, 155, 527, 1035, 1168, 1401
AclWI GGATC 3 cut(s) 312, 464, 936
AcoI YGGCCR 1 cut(s) 775
AcuI CTGAAG 5 cut(s) 45, 299, 829, 1296, 1428
AcvI CACGTG 1 cut(s) 1198
AcyI GRCGYC 2 cut(s) 1158, 1347
AdeI CACNNNGTG 1 cut(s) 899
AfaI GTAC 3 cut(s) 578, 1318, 1566
AfiI CCNNNNNNNGG 3 cut(s) 973, 997, 998
AflIII ACRYGT 2 cut(s) 1062, 1197
AgsI TTSAA 6 cut(s) 20, 432, 533, 555, 766, 1328
AjnI CCWGG 3 cut(s) 199, 966, 1020
AjuI GAANNNNNNNTTGG 2 cut(s) 956, 988
AloI GAACNNNNNNTCC 2 cut(s) 1230, 1262
Alw21I GWGCWC 4 cut(s) 420, 439, 515, 819
Alw26I GTCTC 4 cut(s) 91, 243, 866, 1147
Alw44I GTGCAC 1 cut(s) 416
AlwI GGATC 3 cut(s) 312, 464, 936
AlwNI CAGNNNCTG 4 cut(s) 68, 967, 1073, 1319
Ama87I CYCGRG 1 cut(s) 604
AoxI GGCC 4 cut(s) 775, 886, 1000, 1170
ApaI GGGCCC 2 cut(s) 1004, 1174
ApaLI GTGCAC 1 cut(s) 416
AseI ATTAAT 1 cut(s) 759
AspLEI GCGC 1 cut(s) 1168
AspS9I GGNCC 9 cut(s) 749, 887, 977, 1000, 1001, 1170, 1171, 1332, 1368
AsuHPI GGTGA 4 cut(s) 83, 388, 497, 616
AvaI CYCGRG 1 cut(s) 604
AvaII GGWCC 4 cut(s) 749, 977, 1332, 1368
AxyI CCTNAGG 1 cut(s) 1132
BaeGI GKGCMC 5 cut(s) 336, 401, 420, 1004, 1174
BalI TGGCCA 1 cut(s) 777
BanI GGYRCC 3 cut(s) 116, 566, 1024
BanII GRGCYC 3 cut(s) 439, 1004, 1174
BbrPI CACGTG 1 cut(s) 1198
BbsI GAAGAC 1 cut(s) 1302
Bbv12I GWGCWC 4 cut(s) 420, 439, 515, 819
BbvCI CCTCAGC 1 cut(s) 714
BccI CCATC 1 cut(s) 1093
BceAI ACGGC 1 cut(s) 1231
BciT130I CCWGG 3 cut(s) 201, 968, 1022
BclI TGATCA 1 cut(s) 823
BcoDI GTCTC 4 cut(s) 91, 243, 866, 1147
BfaI CTAG 2 cut(s) 81, 993
BfmI CTRYAG 1 cut(s) 1082
BglII AGATCT 1 cut(s) 279
Bme1390I CCNGG 3 cut(s) 201, 968, 1022
Bme18I GGWCC 4 cut(s) 749, 977, 1332, 1368
BmeT110I CYCGRG 1 cut(s) 604
BmgT120I GGNCC 9 cut(s) 749, 887, 977, 1000, 1001, 1170, 1171, 1332, 1368
BmrFI CCNGG 3 cut(s) 201, 968, 1022
BmrI ACTGGG 3 cut(s) 462, 891, 1329
BmsI GCATC 3 cut(s) 208, 634, 1479
BmuI ACTGGG 3 cut(s) 462, 891, 1329
BoxI GACNNNNGTC 1 cut(s) 1389
BpiI GAAGAC 1 cut(s) 1302
BplI GAGNNNNNCTC 2 cut(s) 497, 529
BpmI CTGGAG 1 cut(s) 989
Bpu10I CCTNAGC 1 cut(s) 714
BsaAI YACGTR 1 cut(s) 1198
BsaBI GATNNNNATC 2 cut(s) 309, 933
BsaHI GRCGYC 2 cut(s) 1158, 1347
BsaI GGTCTC 1 cut(s) 1147
BsaJI CCNNGG 3 cut(s) 344, 772, 872
BsaXI ACNNNNNCTCC 4 cut(s) 1230, 1260, 1381, 1411
Bsc4I CCNNNNNNNGG 3 cut(s) 973, 997, 998
Bse118I RCCGGY 1 cut(s) 1208
Bse1I ACTGG 4 cut(s) 120, 457, 897, 1324
Bse21I CCTNAGG 1 cut(s) 1132
Bse3DI GCAATG 1 cut(s) 1076
Bse8I GATNNNNATC 2 cut(s) 309, 933
BseBI CCWGG 3 cut(s) 201, 968, 1022
BseDI CCNNGG 3 cut(s) 344, 772, 872
BseGI GGATG 2 cut(s) 43, 1049
BseJI GATNNNNATC 2 cut(s) 309, 933
BseLI CCNNNNNNNGG 3 cut(s) 973, 997, 998
BseMI GCAATG 1 cut(s) 1076
BseMII CTCAG 4 cut(s) 146, 728, 1146, 1158
BseNI ACTGG 4 cut(s) 120, 457, 897, 1324
BseRI GAGGAG 6 cut(s) 696, 699, 702, 1120, 1242, 1251
BseSI GKGCMC 5 cut(s) 336, 401, 420, 1004, 1174
Bsh1236I CGCG 2 cut(s) 164, 1168
BshFI GGCC 4 cut(s) 777, 888, 1002, 1172
BshNI GGYRCC 3 cut(s) 116, 566, 1024
BsiHKAI GWGCWC 4 cut(s) 420, 439, 515, 819
BsiHKCI CYCGRG 1 cut(s) 604
BsiSI CCGG 1 cut(s) 1209
BslFI GGGAC 5 cut(s) 458, 626, 735, 1345, 1381
BslI CCNNNNNNNGG 3 cut(s) 973, 997, 998
BsmAI GTCTC 4 cut(s) 91, 243, 866, 1147
BsmFI GGGAC 5 cut(s) 458, 626, 735, 1345, 1381
BsmI GAATGC 1 cut(s) 800
BsnI GGCC 4 cut(s) 777, 888, 1002, 1172
Bso31I GGTCTC 1 cut(s) 1147
BsoBI CYCGRG 1 cut(s) 604
Bsp120I GGGCCC 2 cut(s) 1000, 1170
Bsp1286I GDGCHC 8 cut(s) 336, 401, 420, 439, 515, 819, 1004, 1174
Bsp143I GATC 6 cut(s) 101, 279, 304, 456, 823, 928
Bsp19I CCATGG 2 cut(s) 344, 772
BspACI CCGC 6 cut(s) 152, 155, 527, 1035, 1168, 1401
BspANI GGCC 4 cut(s) 777, 888, 1002, 1172
BspCNI CTCAG 4 cut(s) 145, 727, 1145, 1157
BspFNI CGCG 2 cut(s) 164, 1168
BspHI TCATGA 1 cut(s) 804
BspMAI CTGCAG 1 cut(s) 1086
BspPI GGATC 3 cut(s) 312, 464, 936
BspQI GCTCTTC 1 cut(s) 1370
BspT107I GGYRCC 3 cut(s) 116, 566, 1024
BspTNI GGTCTC 1 cut(s) 1147
BsrDI GCAATG 1 cut(s) 1076
BsrFI RCCGGY 1 cut(s) 1208
BsrI ACTGG 4 cut(s) 120, 457, 897, 1324
BssAI RCCGGY 1 cut(s) 1208
BssECI CCNNGG 3 cut(s) 344, 772, 872
BssMI GATC 6 cut(s) 101, 279, 304, 456, 823, 928
BssNI GRCGYC 2 cut(s) 1158, 1347
BssT1I CCWWGG 3 cut(s) 344, 772, 872
Bst2UI CCWGG 3 cut(s) 201, 968, 1022
Bst4CI ACNGT 7 cut(s) 485, 590, 617, 797, 860, 1473, 1481
Bst6I CTCTTC 7 cut(s) 94, 182, 322, 605, 651, 706, 1370
BstACI GRCGYC 2 cut(s) 1158, 1347
BstAPI GCANNNNNTGC 2 cut(s) 340, 797
BstBAI YACGTR 1 cut(s) 1198
BstC8I GCNNGC 9 cut(s) 409, 879, 1029, 1152, 1156, 1170, 1210, 1272, 1276
BstDEI CTNAG 4 cut(s) 132, 714, 1132, 1144
BstDSI CCRYGG 2 cut(s) 344, 772
BstEII GGTNACC 1 cut(s) 71
BstF5I GGATG 2 cut(s) 43, 1049
BstFNI CGCG 2 cut(s) 164, 1168
BstHHI GCGC 1 cut(s) 1168
BstKTI GATC 6 cut(s) 104, 282, 307, 459, 826, 931
BstMAI GTCTC 4 cut(s) 91, 243, 866, 1147
BstMBI GATC 6 cut(s) 101, 279, 304, 456, 823, 928
BstMWI GCNNNNNNNGC 7 cut(s) 123, 340, 349, 797, 1037, 1040, 1122
BstNI CCWGG 3 cut(s) 201, 968, 1022
BstNSI RCATGY 2 cut(s) 49, 1066
BstPAI GACNNNNGTC 1 cut(s) 1389
BstPI GGTNACC 1 cut(s) 71
BstSCI CCNGG 3 cut(s) 199, 966, 1020
BstSFI CTRYAG 1 cut(s) 1082
BstSLI GKGCMC 5 cut(s) 336, 401, 420, 1004, 1174
BstUI CGCG 2 cut(s) 164, 1168
BstV2I GAAGAC 1 cut(s) 1302
BstX2I RGATCY 1 cut(s) 279
BstYI RGATCY 1 cut(s) 279
Bsu36I CCTNAGG 1 cut(s) 1132
BsuRI GGCC 4 cut(s) 777, 888, 1002, 1172
BtgI CCRYGG 2 cut(s) 344, 772
BtsCI GGATG 2 cut(s) 43, 1049
BtsI GCAGTG 2 cut(s) 686, 1071
BtsIMutI CAGTG 7 cut(s) 686, 802, 904, 1071, 1152, 1469, 1486
Cac8I GCNNGC 9 cut(s) 409, 879, 1029, 1152, 1156, 1170, 1210, 1272, 1276
CaiI CAGNNNCTG 4 cut(s) 68, 967, 1073, 1319
CciI TCATGA 1 cut(s) 804
CfoI GCGC 1 cut(s) 1168
Cfr10I RCCGGY 1 cut(s) 1208
Cfr13I GGNCC 9 cut(s) 749, 887, 977, 1000, 1001, 1170, 1171, 1332, 1368
CseI GACGC 2 cut(s) 1147, 1355
Csp6I GTAC 3 cut(s) 577, 1317, 1565
CviQI GTAC 3 cut(s) 577, 1317, 1565
DdeI CTNAG 4 cut(s) 132, 714, 1132, 1144
DpnI GATC 6 cut(s) 103, 281, 306, 458, 825, 930
DpnII GATC 6 cut(s) 101, 279, 304, 456, 823, 928
DraIII CACNNNGTG 1 cut(s) 899
EaeI YGGCCR 1 cut(s) 775
Eam1104I CTCTTC 7 cut(s) 94, 182, 322, 605, 651, 706, 1370
EarI CTCTTC 7 cut(s) 94, 182, 322, 605, 651, 706, 1370
EciI GGCGGA 1 cut(s) 1416
Ecl136II GAGCTC 1 cut(s) 437
Eco130I CCWWGG 3 cut(s) 344, 772, 872
Eco24I GRGCYC 3 cut(s) 439, 1004, 1174
Eco31I GGTCTC 1 cut(s) 1147
Eco47I GGWCC 4 cut(s) 749, 977, 1332, 1368
Eco53kI GAGCTC 1 cut(s) 437
Eco57I CTGAAG 5 cut(s) 45, 299, 829, 1296, 1428
Eco72I CACGTG 1 cut(s) 1198
Eco81I CCTNAGG 1 cut(s) 1132
Eco88I CYCGRG 1 cut(s) 604
Eco91I GGTNACC 1 cut(s) 71
EcoICRI GAGCTC 1 cut(s) 437
EcoO109I RGGNCCY 3 cut(s) 1001, 1332, 1368
EcoO65I GGTNACC 1 cut(s) 71
EcoRII CCWGG 3 cut(s) 199, 966, 1020
EcoT14I CCWWGG 3 cut(s) 344, 772, 872
EcoT22I ATGCAT 1 cut(s) 793
EcoT38I GRGCYC 3 cut(s) 439, 1004, 1174
ErhI CCWWGG 3 cut(s) 344, 772, 872
FalI AAGNNNNNCTT 2 cut(s) 452, 484
FaqI GGGAC 5 cut(s) 458, 626, 735, 1345, 1381
FauI CCCGC 1 cut(s) 1161
FauNDI CATATG 2 cut(s) 272, 729
FbaI TGATCA 1 cut(s) 823
FokI GGATG 2 cut(s) 50, 1036
FriOI GRGCYC 3 cut(s) 439, 1004, 1174
FspBI CTAG 2 cut(s) 81, 993
GlaI GCGC 1 cut(s) 1167
GsuI CTGGAG 1 cut(s) 989
HaeIII GGCC 4 cut(s) 777, 888, 1002, 1172
HapII CCGG 1 cut(s) 1209
HgaI GACGC 2 cut(s) 1147, 1355
HhaI GCGC 1 cut(s) 1168
Hin1I GRCGYC 2 cut(s) 1158, 1347
Hin6I GCGC 1 cut(s) 1166
HinP1I GCGC 1 cut(s) 1166
HindIII AAGCTT 1 cut(s) 6
HinfI GANTC 4 cut(s) 267, 310, 1390, 1558
HpaII CCGG 1 cut(s) 1209
HphI GGTGA 4 cut(s) 83, 388, 497, 616
Hpy166II GTNNAC 1 cut(s) 418
Hpy188I TCNGA 5 cut(s) 300, 309, 538, 1183, 1395
Hpy8I GTNNAC 1 cut(s) 418
HpyAV CCTTC 7 cut(s) 438, 603, 805, 1081, 1322, 1360, 1430
HpyCH4III ACNGT 7 cut(s) 485, 590, 617, 797, 860, 1473, 1481
HpyCH4IV ACGT 1 cut(s) 1197
HpyF10VI GCNNNNNNNGC 7 cut(s) 123, 340, 349, 797, 1037, 1040, 1122
HpyF3I CTNAG 4 cut(s) 132, 714, 1132, 1144
HpySE526I ACGT 1 cut(s) 1197
Hsp92I GRCGYC 2 cut(s) 1158, 1347
HspAI GCGC 1 cut(s) 1166
KroI GCCGGC 1 cut(s) 1208
KroNI GCCGGC 1 cut(s) 1210
Ksp22I TGATCA 1 cut(s) 823
Kzo9I GATC 6 cut(s) 101, 279, 304, 456, 823, 928
LguI GCTCTTC 1 cut(s) 1370
LmnI GCTCC 5 cut(s) 324, 814, 1103, 1229, 1403
LweI GCATC 3 cut(s) 208, 634, 1479
MaeI CTAG 2 cut(s) 81, 993
MaeII ACGT 1 cut(s) 1197
MaeIII GTNAC 5 cut(s) 71, 584, 1193, 1481, 1547
MalI GATC 6 cut(s) 103, 281, 306, 458, 825, 930
MboI GATC 6 cut(s) 101, 279, 304, 456, 823, 928
MflI RGATCY 1 cut(s) 279
MhlI GDGCHC 8 cut(s) 336, 401, 420, 439, 515, 819, 1004, 1174
MlsI TGGCCA 1 cut(s) 777
MluCI AATT 7 cut(s) 14, 52, 337, 760, 834, 1016, 1579
MluNI TGGCCA 1 cut(s) 777
MlyI GAGTC 1 cut(s) 1399
MmeI TCCRAC 1 cut(s) 1373
Mox20I TGGCCA 1 cut(s) 777
Mph1103I ATGCAT 1 cut(s) 793
MroNI GCCGGC 1 cut(s) 1208
MscI TGGCCA 1 cut(s) 777
MseI TTAA 3 cut(s) 56, 759, 1494
MslI CAYNNNNRTG 1 cut(s) 777
Msp20I TGGCCA 1 cut(s) 777
MspA1I CMGCKG 3 cut(s) 411, 1154, 1205
MspI CCGG 1 cut(s) 1209
MspR9I CCNGG 3 cut(s) 201, 968, 1022
Mva1269I GAATGC 1 cut(s) 800
MvaI CCWGG 3 cut(s) 201, 968, 1022
MvnI CGCG 2 cut(s) 164, 1168
MwoI GCNNNNNNNGC 7 cut(s) 123, 340, 349, 797, 1037, 1040, 1122
NaeI GCCGGC 1 cut(s) 1210
NcoI CCATGG 2 cut(s) 344, 772
NdeI CATATG 2 cut(s) 272, 729
NdeII GATC 6 cut(s) 101, 279, 304, 456, 823, 928
NgoMIV GCCGGC 1 cut(s) 1208
NmuCI GTSAC 5 cut(s) 71, 584, 1193, 1481, 1547
NsiI ATGCAT 1 cut(s) 793
NspI RCATGY 2 cut(s) 49, 1066
PaeR7I CTCGAG 1 cut(s) 604
PagI TCATGA 1 cut(s) 804
PciI ACATGT 1 cut(s) 1062
PciSI GCTCTTC 1 cut(s) 1370
PcsI WCGNNNNNNNCGW 1 cut(s) 1194
PctI GAATGC 1 cut(s) 800
PdiI GCCGGC 1 cut(s) 1210
PfeI GAWTC 3 cut(s) 267, 310, 1558
PleI GAGTC 1 cut(s) 1398
PmaCI CACGTG 1 cut(s) 1198
PmlI CACGTG 1 cut(s) 1198
PpsI GAGTC 1 cut(s) 1398
Ppu21I YACGTR 1 cut(s) 1198
PpuMI RGGWCCY 2 cut(s) 1332, 1368
PscI ACATGT 1 cut(s) 1062
PshAI GACNNNNGTC 1 cut(s) 1389
PshBI ATTAAT 1 cut(s) 759
Psp124BI GAGCTC 1 cut(s) 439
Psp5II RGGWCCY 2 cut(s) 1332, 1368
Psp6I CCWGG 3 cut(s) 199, 966, 1020
PspCI CACGTG 1 cut(s) 1198
PspEI GGTNACC 1 cut(s) 71
PspGI CCWGG 3 cut(s) 199, 966, 1020
PspOMI GGGCCC 2 cut(s) 1000, 1170
PspPI GGNCC 9 cut(s) 749, 887, 977, 1000, 1001, 1170, 1171, 1332, 1368
PspPPI RGGWCCY 2 cut(s) 1332, 1368
PstI CTGCAG 1 cut(s) 1086
PstNI CAGNNNCTG 4 cut(s) 68, 967, 1073, 1319
PsuI RGATCY 1 cut(s) 279
PvuII CAGCTG 3 cut(s) 411, 1154, 1205
RsaI GTAC 3 cut(s) 578, 1318, 1566
RsaNI GTAC 3 cut(s) 577, 1317, 1565
RseI CAYNNNNRTG 1 cut(s) 777
SacI GAGCTC 1 cut(s) 439
SapI GCTCTTC 1 cut(s) 1370
SaqAI TTAA 3 cut(s) 56, 759, 1494
Sau3AI GATC 6 cut(s) 101, 279, 304, 456, 823, 928
Sau96I GGNCC 9 cut(s) 749, 887, 977, 1000, 1001, 1170, 1171, 1332, 1368
SchI GAGTC 1 cut(s) 1399
ScrFI CCNGG 3 cut(s) 201, 968, 1022
SduI GDGCHC 8 cut(s) 336, 401, 420, 439, 515, 819, 1004, 1174
SfaNI GCATC 3 cut(s) 208, 634, 1479
SfcI CTRYAG 1 cut(s) 1082
Sfr274I CTCGAG 1 cut(s) 604
SinI GGWCC 4 cut(s) 749, 977, 1332, 1368
SlaI CTCGAG 1 cut(s) 604
SmiMI CAYNNNNRTG 1 cut(s) 777
SmlI CTYRAG 1 cut(s) 604
SmoI CTYRAG 1 cut(s) 604
Sse9I AATT 7 cut(s) 14, 52, 337, 760, 834, 1016, 1579
SsiI CCGC 6 cut(s) 152, 155, 527, 1035, 1168, 1401
SspMI CTAG 2 cut(s) 81, 993
SstI GAGCTC 1 cut(s) 439
StyD4I CCNGG 3 cut(s) 199, 966, 1020
StyI CCWWGG 3 cut(s) 344, 772, 872
TaaI ACNGT 7 cut(s) 485, 590, 617, 797, 860, 1473, 1481
TaiI ACGT 1 cut(s) 1200
TaqI TCGA 4 cut(s) 605, 1341, 1373, 1541
TaqII GACCGA 1 cut(s) 1129
TasI AATT 7 cut(s) 14, 52, 337, 760, 834, 1016, 1579
TatI WGTACW 1 cut(s) 576
TauI GCSGC 2 cut(s) 157, 1037
TfiI GAWTC 3 cut(s) 267, 310, 1558
Tru1I TTAA 3 cut(s) 56, 759, 1494
Tru9I TTAA 3 cut(s) 56, 759, 1494
TscAI CASTG 7 cut(s) 693, 802, 904, 1078, 1152, 1476, 1486
TseFI GTSAC 5 cut(s) 71, 584, 1193, 1481, 1547
Tsp45I GTSAC 5 cut(s) 71, 584, 1193, 1481, 1547
TspDTI ATGAA 8 cut(s) 17, 259, 610, 746, 793, 821, 1238, 1313
TspRI CASTG 7 cut(s) 693, 802, 904, 1078, 1152, 1476, 1486
VneI GTGCAC 1 cut(s) 416
VpaK11BI GGWCC 4 cut(s) 749, 977, 1332, 1368
VspI ATTAAT 1 cut(s) 759
XceI RCATGY 2 cut(s) 49, 1066
XcmI CCANNNNNNNNNTGG 2 cut(s) 250, 1453
XhoI CTCGAG 1 cut(s) 604
XspI CTAG 2 cut(s) 81, 993
Zsp2I ATGCAT 1 cut(s) 793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.