Rroxscaffold_2G00101820

ZINC FINGER protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0006445
Physical Location & Seq
Forward (+)
23751677 .. 23754831
3155 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00101820.1

Sequence Viewer

Length: 1614 bp
ATGAAAGCTTTGCAATTTCAACAGCAACAACAGGTGGATGAGAACATGTCTAATTTAACTTCAGCTTCTGGTGACCAAGCTAGTGTCTCTTCTGGAAACAGATCAACTGAAATCGGCACCAGTAACTTTTCTCAGCAGTATTTTCCTCCACCGCCGCCTCACGCGAATAGTCAAGGTGTGAAAAGGAAGAGAAACCAGCCAGGAAACCCAGACCCAGATGCAGAAGTGATAGCTTTGTCTCCCAAGACCCTCATGGCAACGAACAGATTCATATGTGAGATCTGCAACAAAGGGTTTCAGAGGGATCAGAATCTTCAGCTCCACAGAAGAGGGCACAATTTGCCATGGAAGTTAAAGCAGAGAACAAGCAAAGAGGTGAGGAAGAAAGTATATGTGTGCCCAGAAGCCAGCTGTGTGCACCATGACCCTTCAAGAGCTCTTGGGGACTTGACTGGGATCAAGAAGCACTTTTTCAGAAAGCACGGTGAGAAGAAGTGGAAATGTGAGAAGTGCTCAAAGAAGTATGCGGTTCAATCAGATTGGAAAGCCCATTCAAAGACCTGTGGCACCAGAGAGTACAGATGTGACTGTGGAACTCTCTTCTCGAGAAGGGACAGTTTCATCACCCACAGAGCTTTCTGTGATGCTTTAGCAGAAGAGAGTGCAAGAGCCATAAACCCAACACCACTGCAAACCCTCTCTTCTCCTCCTCCTCCTCAGCCTCAAAATCATATGAACCTCATGGGTGGTGGTCCCCACATTAATTTCAACCCCCATGGCCATGACCTCCATGCATACAGTGCATTCATGAAGAAGGAGCACAATGATCATCAGCAAATTAGCAGCTTCAGTTCCACCAACAGTCTCTTACCACCTTGGCTTGCTTCTGGCCCACCACCCAGTGCTACCTCTATCTTCTCTGGAAATCAGGATCATCATCATCATCATCATCACGATTTCCAGCAGAACCTGGAGTTGGGTCCAAACCCTAACCCTAGCTTGGGCCCCACTCTCCCTCAATTCCAGGTGCCTCCTGCTGCTGCAGCAGCCTTGTCATCCCCACCTCACATGTCAGCCACTGCATTGCTGCAGAAGGCAGCTCAGATGGGAGCGACAATGAGCAGCAGCAGCACCTCTTCAGGCTCGGTCTCAGTGCCAGCTGGCGTCATGGCGCGGGCCCACCACGGTGGTCACCTGTCTGACTTCGGGGGTCACGTGTCAGCTGCCGGCAACAGCATTGGTGGAGGAGCAGGAGGAGGAGGTAGCGTTCATCATCAACAACAGCAGCAGCAAGCCAGCTCTCTTTTGCATGACATGATGAACTCTCTGTCTTCGGGTACTGGGTTTGAAGGGACCTCGTTCGAGGACGCCTTCGGTGGCATTTTGGGGAACTCGAAGAGCAAAGACGGGAGTCGGAGTGGCGGAGCTGACGAAAATGGTGTCGTTGGTGGTGGGGAAGGTTTGACCAGAGATTTCTTGGGGCTAAAAGCACTGTCGCACAGTGACATGATGCTTAGTATCGCTGGTCTGGGAAACTGCGTAAGCAACAACAATAGTAGTTCGACCCGTGACTTGCAGAATCAAGTACCACAAAAACCTAATTGGCAGGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2_jaz zf-met

Protein Analysis

537

Amino Acids

57.71

Weight (kDa)

8.96

Isoelectric Point (pI)

46.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2H2-2nd_BIRD-IDD PF22996 127 - 161 6.4e-22 BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD PF22995 165 - 189 1.4e-14 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 192 - 227 2.5e-24 BIRD-IDD transcription factor, fourth C2HC zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 116, 566, 1027
AccII CGCG 2 cut(s) 164, 1174
AciI CCGC 5 cut(s) 152, 155, 527, 1174, 1422
AclWI GGATC 3 cut(s) 312, 464, 939
AcoI YGGCCR 1 cut(s) 778
AcuI CTGAAG 4 cut(s) 45, 299, 832, 1122
AcvI CACGTG 1 cut(s) 1216
AcyI GRCGYC 2 cut(s) 1164, 1368
AdeI CACNNNGTG 1 cut(s) 902
AfaI GTAC 3 cut(s) 578, 1339, 1587
AfiI CCNNNNNNNGG 3 cut(s) 976, 1000, 1001
AflIII ACRYGT 3 cut(s) 45, 1068, 1215
AgsI TTSAA 6 cut(s) 20, 432, 533, 555, 769, 1349
AjnI CCWGG 3 cut(s) 199, 969, 1023
AjuI GAANNNNNNNTTGG 2 cut(s) 959, 991
AleI CACNNNNGTG 1 cut(s) 1185
AloI GAACNNNNNNTCC 2 cut(s) 1251, 1283
Alw21I GWGCWC 4 cut(s) 420, 439, 515, 822
Alw26I GTCTC 4 cut(s) 91, 243, 869, 1153
Alw44I GTGCAC 1 cut(s) 416
AlwI GGATC 3 cut(s) 312, 464, 939
AlwNI CAGNNNCTG 3 cut(s) 68, 970, 1079
Ama87I CYCGRG 1 cut(s) 604
AoxI GGCC 4 cut(s) 778, 889, 1003, 1176
ApaI GGGCCC 2 cut(s) 1007, 1180
ApaLI GTGCAC 1 cut(s) 416
ArsI GACNNNNNNTTYG 2 cut(s) 1425, 1457
AseI ATTAAT 1 cut(s) 762
Asp700I GAANNNNTTC 1 cut(s) 266
AspLEI GCGC 1 cut(s) 1174
AspS9I GGNCC 8 cut(s) 752, 890, 980, 1003, 1004, 1176, 1177, 1353
AsuHPI GGTGA 5 cut(s) 83, 388, 497, 616, 1184
AvaI CYCGRG 1 cut(s) 604
AvaII GGWCC 3 cut(s) 752, 980, 1353
BaeGI GKGCMC 5 cut(s) 336, 401, 420, 1007, 1180
BalI TGGCCA 1 cut(s) 780
BanI GGYRCC 3 cut(s) 116, 566, 1027
BanII GRGCYC 3 cut(s) 439, 1007, 1180
BbrPI CACGTG 1 cut(s) 1216
BbsI GAAGAC 1 cut(s) 1323
Bbv12I GWGCWC 4 cut(s) 420, 439, 515, 822
BbvCI CCTCAGC 1 cut(s) 717
BccI CCATC 1 cut(s) 1099
BciT130I CCWGG 3 cut(s) 201, 971, 1025
BclI TGATCA 1 cut(s) 826
BcoDI GTCTC 4 cut(s) 91, 243, 869, 1153
BfaI CTAG 2 cut(s) 81, 996
BfmI CTRYAG 2 cut(s) 1041, 1088
BglII AGATCT 1 cut(s) 279
Bme1390I CCNGG 3 cut(s) 201, 971, 1025
Bme18I GGWCC 3 cut(s) 752, 980, 1353
BmeT110I CYCGRG 1 cut(s) 604
BmgT120I GGNCC 8 cut(s) 752, 890, 980, 1003, 1004, 1176, 1177, 1353
BmiI GGNNCC 9 cut(s) 118, 568, 754, 981, 1005, 1006, 1029, 1178, 1354
BmrFI CCNGG 3 cut(s) 201, 971, 1025
BmrI ACTGGG 3 cut(s) 462, 894, 1350
BmsI GCATC 3 cut(s) 208, 634, 1500
BmuI ACTGGG 3 cut(s) 462, 894, 1350
BoxI GACNNNNGTC 1 cut(s) 1410
BpiI GAAGAC 1 cut(s) 1323
BplI GAGNNNNNCTC 2 cut(s) 497, 529
BpmI CTGGAG 1 cut(s) 992
Bpu10I CCTNAGC 1 cut(s) 717
BsaAI YACGTR 1 cut(s) 1216
BsaBI GATNNNNATC 2 cut(s) 309, 936
BsaHI GRCGYC 2 cut(s) 1164, 1368
BsaI GGTCTC 1 cut(s) 1153
BsaJI CCNNGG 4 cut(s) 344, 775, 875, 1183
BsaXI ACNNNNNCTCC 4 cut(s) 1251, 1281, 1402, 1432
Bsc4I CCNNNNNNNGG 3 cut(s) 976, 1000, 1001
Bse118I RCCGGY 1 cut(s) 1226
Bse1I ACTGG 4 cut(s) 120, 457, 900, 1345
Bse3DI GCAATG 1 cut(s) 1082
Bse8I GATNNNNATC 2 cut(s) 309, 936
BseBI CCWGG 3 cut(s) 201, 971, 1025
BseDI CCNNGG 4 cut(s) 344, 775, 875, 1183
BseGI GGATG 2 cut(s) 43, 1055
BseJI GATNNNNATC 2 cut(s) 309, 936
BseLI CCNNNNNNNGG 3 cut(s) 976, 1000, 1001
BseMI GCAATG 1 cut(s) 1082
BseMII CTCAG 4 cut(s) 146, 731, 1115, 1164
BseNI ACTGG 4 cut(s) 120, 457, 900, 1345
BseRI GAGGAG 7 cut(s) 696, 699, 702, 705, 1260, 1269, 1272
BseSI GKGCMC 5 cut(s) 336, 401, 420, 1007, 1180
Bsh1236I CGCG 2 cut(s) 164, 1174
BshFI GGCC 4 cut(s) 780, 891, 1005, 1178
BshNI GGYRCC 3 cut(s) 116, 566, 1027
BsiHKAI GWGCWC 4 cut(s) 420, 439, 515, 822
BsiHKCI CYCGRG 1 cut(s) 604
BsiSI CCGG 1 cut(s) 1227
BslFI GGGAC 4 cut(s) 458, 626, 738, 1366
BslI CCNNNNNNNGG 3 cut(s) 976, 1000, 1001
BsmAI GTCTC 4 cut(s) 91, 243, 869, 1153
BsmFI GGGAC 4 cut(s) 458, 626, 738, 1366
BsmI GAATGC 1 cut(s) 803
BsnI GGCC 4 cut(s) 780, 891, 1005, 1178
Bso31I GGTCTC 1 cut(s) 1153
BsoBI CYCGRG 1 cut(s) 604
Bsp120I GGGCCC 2 cut(s) 1003, 1176
Bsp1286I GDGCHC 8 cut(s) 336, 401, 420, 439, 515, 822, 1007, 1180
Bsp143I GATC 6 cut(s) 101, 279, 304, 456, 826, 931
Bsp19I CCATGG 2 cut(s) 344, 775
BspACI CCGC 5 cut(s) 152, 155, 527, 1174, 1422
BspANI GGCC 4 cut(s) 780, 891, 1005, 1178
BspCNI CTCAG 4 cut(s) 145, 730, 1114, 1163
BspFNI CGCG 2 cut(s) 164, 1174
BspHI TCATGA 1 cut(s) 807
BspLI GGNNCC 9 cut(s) 118, 568, 754, 981, 1005, 1006, 1029, 1178, 1354
BspMAI CTGCAG 2 cut(s) 1045, 1092
BspPI GGATC 3 cut(s) 312, 464, 939
BspQI GCTCTTC 1 cut(s) 1391
BspT107I GGYRCC 3 cut(s) 116, 566, 1027
BspTNI GGTCTC 1 cut(s) 1153
BsrDI GCAATG 1 cut(s) 1082
BsrFI RCCGGY 1 cut(s) 1226
BsrI ACTGG 4 cut(s) 120, 457, 900, 1345
BssAI RCCGGY 1 cut(s) 1226
BssECI CCNNGG 4 cut(s) 344, 775, 875, 1183
BssMI GATC 6 cut(s) 101, 279, 304, 456, 826, 931
BssNI GRCGYC 2 cut(s) 1164, 1368
BssT1I CCWWGG 3 cut(s) 344, 775, 875
Bst2UI CCWGG 3 cut(s) 201, 971, 1025
Bst4CI ACNGT 8 cut(s) 485, 590, 617, 800, 863, 1187, 1494, 1502
Bst6I CTCTTC 8 cut(s) 94, 182, 322, 605, 651, 706, 1141, 1391
BstACI GRCGYC 2 cut(s) 1164, 1368
BstAPI GCANNNNNTGC 2 cut(s) 340, 800
BstBAI YACGTR 1 cut(s) 1216
BstC8I GCNNGC 8 cut(s) 409, 882, 1158, 1162, 1176, 1228, 1293, 1297
BstDEI CTNAG 5 cut(s) 132, 717, 1101, 1150, 1514
BstDSI CCRYGG 3 cut(s) 344, 775, 1183
BstEII GGTNACC 2 cut(s) 71, 1190
BstF5I GGATG 2 cut(s) 43, 1055
BstFNI CGCG 2 cut(s) 164, 1174
BstHHI GCGC 1 cut(s) 1174
BstKTI GATC 6 cut(s) 104, 282, 307, 459, 829, 934
BstMAI GTCTC 4 cut(s) 91, 243, 869, 1153
BstMBI GATC 6 cut(s) 101, 279, 304, 456, 826, 931
BstMWI GCNNNNNNNGC 5 cut(s) 340, 800, 1043, 1046, 1128
BstNI CCWGG 3 cut(s) 201, 971, 1025
BstNSI RCATGY 2 cut(s) 49, 1072
BstPAI GACNNNNGTC 1 cut(s) 1410
BstPI GGTNACC 2 cut(s) 71, 1190
BstSCI CCNGG 3 cut(s) 199, 969, 1023
BstSFI CTRYAG 2 cut(s) 1041, 1088
BstSLI GKGCMC 5 cut(s) 336, 401, 420, 1007, 1180
BstUI CGCG 2 cut(s) 164, 1174
BstV2I GAAGAC 1 cut(s) 1323
BstX2I RGATCY 1 cut(s) 279
BstXI CCANNNNNNTGG 1 cut(s) 1187
BstYI RGATCY 1 cut(s) 279
BsuRI GGCC 4 cut(s) 780, 891, 1005, 1178
BtgI CCRYGG 3 cut(s) 344, 775, 1183
BtsCI GGATG 2 cut(s) 43, 1055
BtsI GCAGTG 2 cut(s) 686, 1077
BtsIMutI CAGTG 7 cut(s) 686, 805, 907, 1077, 1158, 1490, 1507
Cac8I GCNNGC 8 cut(s) 409, 882, 1158, 1162, 1176, 1228, 1293, 1297
CaiI CAGNNNCTG 3 cut(s) 68, 970, 1079
CciI TCATGA 1 cut(s) 807
CfoI GCGC 1 cut(s) 1174
Cfr10I RCCGGY 1 cut(s) 1226
Cfr13I GGNCC 8 cut(s) 752, 890, 980, 1003, 1004, 1176, 1177, 1353
CseI GACGC 2 cut(s) 1153, 1376
Csp6I GTAC 3 cut(s) 577, 1338, 1586
CviQI GTAC 3 cut(s) 577, 1338, 1586
DdeI CTNAG 5 cut(s) 132, 717, 1101, 1150, 1514
DpnI GATC 6 cut(s) 103, 281, 306, 458, 828, 933
DpnII GATC 6 cut(s) 101, 279, 304, 456, 826, 931
DraIII CACNNNGTG 1 cut(s) 902
EaeI YGGCCR 1 cut(s) 778
Eam1104I CTCTTC 8 cut(s) 94, 182, 322, 605, 651, 706, 1141, 1391
EarI CTCTTC 8 cut(s) 94, 182, 322, 605, 651, 706, 1141, 1391
EciI GGCGGA 1 cut(s) 1437
Ecl136II GAGCTC 1 cut(s) 437
Eco130I CCWWGG 3 cut(s) 344, 775, 875
Eco24I GRGCYC 3 cut(s) 439, 1007, 1180
Eco31I GGTCTC 1 cut(s) 1153
Eco47I GGWCC 3 cut(s) 752, 980, 1353
Eco53kI GAGCTC 1 cut(s) 437
Eco57I CTGAAG 4 cut(s) 45, 299, 832, 1122
Eco72I CACGTG 1 cut(s) 1216
Eco88I CYCGRG 1 cut(s) 604
Eco91I GGTNACC 2 cut(s) 71, 1190
EcoICRI GAGCTC 1 cut(s) 437
EcoO109I RGGNCCY 2 cut(s) 1004, 1353
EcoO65I GGTNACC 2 cut(s) 71, 1190
EcoRII CCWGG 3 cut(s) 199, 969, 1023
EcoT14I CCWWGG 3 cut(s) 344, 775, 875
EcoT22I ATGCAT 1 cut(s) 796
EcoT38I GRGCYC 3 cut(s) 439, 1007, 1180
ErhI CCWWGG 3 cut(s) 344, 775, 875
FalI AAGNNNNNCTT 2 cut(s) 452, 484
FaqI GGGAC 4 cut(s) 458, 626, 738, 1366
FauI CCCGC 1 cut(s) 1167
FauNDI CATATG 2 cut(s) 272, 732
FbaI TGATCA 1 cut(s) 826
FokI GGATG 2 cut(s) 50, 1042
FriOI GRGCYC 3 cut(s) 439, 1007, 1180
FspBI CTAG 2 cut(s) 81, 996
GlaI GCGC 1 cut(s) 1173
GsuI CTGGAG 1 cut(s) 992
HaeIII GGCC 4 cut(s) 780, 891, 1005, 1178
HapII CCGG 1 cut(s) 1227
HgaI GACGC 2 cut(s) 1153, 1376
HhaI GCGC 1 cut(s) 1174
Hin1I GRCGYC 2 cut(s) 1164, 1368
Hin6I GCGC 1 cut(s) 1172
HinP1I GCGC 1 cut(s) 1172
HindIII AAGCTT 1 cut(s) 6
HinfI GANTC 4 cut(s) 267, 310, 1411, 1579
HpaII CCGG 1 cut(s) 1227
HphI GGTGA 5 cut(s) 83, 388, 497, 616, 1184
Hpy166II GTNNAC 1 cut(s) 418
Hpy188I TCNGA 7 cut(s) 300, 309, 476, 538, 1104, 1201, 1416
Hpy188III TCNNGA 9 cut(s) 93, 432, 460, 604, 606, 808, 921, 929, 953
Hpy8I GTNNAC 1 cut(s) 418
HpyAV CCTTC 7 cut(s) 438, 603, 808, 1087, 1343, 1381, 1451
HpyCH4III ACNGT 8 cut(s) 485, 590, 617, 800, 863, 1187, 1494, 1502
HpyCH4IV ACGT 1 cut(s) 1215
HpyF10VI GCNNNNNNNGC 5 cut(s) 340, 800, 1043, 1046, 1128
HpyF3I CTNAG 5 cut(s) 132, 717, 1101, 1150, 1514
HpySE526I ACGT 1 cut(s) 1215
Hsp92I GRCGYC 2 cut(s) 1164, 1368
HspAI GCGC 1 cut(s) 1172
KroI GCCGGC 1 cut(s) 1226
KroNI GCCGGC 1 cut(s) 1228
Ksp22I TGATCA 1 cut(s) 826
Kzo9I GATC 6 cut(s) 101, 279, 304, 456, 826, 931
LguI GCTCTTC 1 cut(s) 1391
LmnI GCTCC 5 cut(s) 324, 817, 1109, 1247, 1424
LweI GCATC 3 cut(s) 208, 634, 1500
MaeI CTAG 2 cut(s) 81, 996
MaeII ACGT 1 cut(s) 1215
MaeIII GTNAC 7 cut(s) 71, 122, 584, 1190, 1211, 1502, 1568
MalI GATC 6 cut(s) 103, 281, 306, 458, 828, 933
MboI GATC 6 cut(s) 101, 279, 304, 456, 826, 931
MflI RGATCY 1 cut(s) 279
MhlI GDGCHC 8 cut(s) 336, 401, 420, 439, 515, 822, 1007, 1180
MlsI TGGCCA 1 cut(s) 780
MluCI AATT 7 cut(s) 14, 52, 337, 763, 837, 1019, 1600
MluNI TGGCCA 1 cut(s) 780
MlyI GAGTC 1 cut(s) 1420
MmeI TCCRAC 1 cut(s) 1394
Mox20I TGGCCA 1 cut(s) 780
Mph1103I ATGCAT 1 cut(s) 796
MroNI GCCGGC 1 cut(s) 1226
MroXI GAANNNNTTC 1 cut(s) 266
MscI TGGCCA 1 cut(s) 780
MseI TTAA 3 cut(s) 56, 353, 762
MslI CAYNNNNRTG 2 cut(s) 780, 1185
Msp20I TGGCCA 1 cut(s) 780
MspA1I CMGCKG 3 cut(s) 411, 1160, 1223
MspI CCGG 1 cut(s) 1227
MspR9I CCNGG 3 cut(s) 201, 971, 1025
Mva1269I GAATGC 1 cut(s) 803
MvaI CCWGG 3 cut(s) 201, 971, 1025
MvnI CGCG 2 cut(s) 164, 1174
MwoI GCNNNNNNNGC 5 cut(s) 340, 800, 1043, 1046, 1128
NaeI GCCGGC 1 cut(s) 1228
NcoI CCATGG 2 cut(s) 344, 775
NdeI CATATG 2 cut(s) 272, 732
NdeII GATC 6 cut(s) 101, 279, 304, 456, 826, 931
NgoMIV GCCGGC 1 cut(s) 1226
NlaIV GGNNCC 9 cut(s) 118, 568, 754, 981, 1005, 1006, 1029, 1178, 1354
NmuCI GTSAC 6 cut(s) 71, 584, 1190, 1211, 1502, 1568
NsiI ATGCAT 1 cut(s) 796
NspI RCATGY 2 cut(s) 49, 1072
OliI CACNNNNGTG 1 cut(s) 1185
PaeR7I CTCGAG 1 cut(s) 604
PagI TCATGA 1 cut(s) 807
PciI ACATGT 2 cut(s) 45, 1068
PciSI GCTCTTC 1 cut(s) 1391
PcsI WCGNNNNNNNCGW 1 cut(s) 1212
PctI GAATGC 1 cut(s) 803
PdiI GCCGGC 1 cut(s) 1228
PdmI GAANNNNTTC 1 cut(s) 266
PfeI GAWTC 3 cut(s) 267, 310, 1579
PleI GAGTC 1 cut(s) 1419
PmaCI CACGTG 1 cut(s) 1216
PmlI CACGTG 1 cut(s) 1216
PpsI GAGTC 1 cut(s) 1419
Ppu21I YACGTR 1 cut(s) 1216
PpuMI RGGWCCY 1 cut(s) 1353
PscI ACATGT 2 cut(s) 45, 1068
PshAI GACNNNNGTC 1 cut(s) 1410
PshBI ATTAAT 1 cut(s) 762
Psp124BI GAGCTC 1 cut(s) 439
Psp5II RGGWCCY 1 cut(s) 1353
Psp6I CCWGG 3 cut(s) 199, 969, 1023
PspCI CACGTG 1 cut(s) 1216
PspEI GGTNACC 2 cut(s) 71, 1190
PspGI CCWGG 3 cut(s) 199, 969, 1023
PspN4I GGNNCC 9 cut(s) 118, 568, 754, 981, 1005, 1006, 1029, 1178, 1354
PspOMI GGGCCC 2 cut(s) 1003, 1176
PspPI GGNCC 8 cut(s) 752, 890, 980, 1003, 1004, 1176, 1177, 1353
PspPPI RGGWCCY 1 cut(s) 1353
PstI CTGCAG 2 cut(s) 1045, 1092
PstNI CAGNNNCTG 3 cut(s) 68, 970, 1079
PsuI RGATCY 1 cut(s) 279
PvuII CAGCTG 3 cut(s) 411, 1160, 1223
RsaI GTAC 3 cut(s) 578, 1339, 1587
RsaNI GTAC 3 cut(s) 577, 1338, 1586
RseI CAYNNNNRTG 2 cut(s) 780, 1185
SacI GAGCTC 1 cut(s) 439
SapI GCTCTTC 1 cut(s) 1391
SaqAI TTAA 3 cut(s) 56, 353, 762
Sau3AI GATC 6 cut(s) 101, 279, 304, 456, 826, 931
Sau96I GGNCC 8 cut(s) 752, 890, 980, 1003, 1004, 1176, 1177, 1353
SchI GAGTC 1 cut(s) 1420
ScrFI CCNGG 3 cut(s) 201, 971, 1025
SduI GDGCHC 8 cut(s) 336, 401, 420, 439, 515, 822, 1007, 1180
SfaNI GCATC 3 cut(s) 208, 634, 1500
SfcI CTRYAG 2 cut(s) 1041, 1088
Sfr274I CTCGAG 1 cut(s) 604
SinI GGWCC 3 cut(s) 752, 980, 1353
SlaI CTCGAG 1 cut(s) 604
SmiMI CAYNNNNRTG 2 cut(s) 780, 1185
SmlI CTYRAG 1 cut(s) 604
SmoI CTYRAG 1 cut(s) 604
Sse9I AATT 7 cut(s) 14, 52, 337, 763, 837, 1019, 1600
SsiI CCGC 5 cut(s) 152, 155, 527, 1174, 1422
SspMI CTAG 2 cut(s) 81, 996
SstI GAGCTC 1 cut(s) 439
StyD4I CCNGG 3 cut(s) 199, 969, 1023
StyI CCWWGG 3 cut(s) 344, 775, 875
TaaI ACNGT 8 cut(s) 485, 590, 617, 800, 863, 1187, 1494, 1502
TaiI ACGT 1 cut(s) 1218
TaqI TCGA 4 cut(s) 605, 1362, 1394, 1562
TaqII GACCGA 1 cut(s) 1135
TasI AATT 7 cut(s) 14, 52, 337, 763, 837, 1019, 1600
TatI WGTACW 1 cut(s) 576
TauI GCSGC 1 cut(s) 157
TfiI GAWTC 3 cut(s) 267, 310, 1579
Tru1I TTAA 3 cut(s) 56, 353, 762
Tru9I TTAA 3 cut(s) 56, 353, 762
TscAI CASTG 7 cut(s) 693, 805, 907, 1084, 1158, 1497, 1507
TseFI GTSAC 6 cut(s) 71, 584, 1190, 1211, 1502, 1568
Tsp45I GTSAC 6 cut(s) 71, 584, 1190, 1211, 1502, 1568
TspDTI ATGAA 8 cut(s) 17, 259, 610, 749, 796, 824, 1259, 1334
TspRI CASTG 7 cut(s) 693, 805, 907, 1084, 1158, 1497, 1507
VneI GTGCAC 1 cut(s) 416
VpaK11BI GGWCC 3 cut(s) 752, 980, 1353
VspI ATTAAT 1 cut(s) 762
XceI RCATGY 2 cut(s) 49, 1072
XcmI CCANNNNNNNNNTGG 2 cut(s) 250, 1474
XhoI CTCGAG 1 cut(s) 604
XmnI GAANNNNTTC 1 cut(s) 266
XspI CTAG 2 cut(s) 81, 996
Zsp2I ATGCAT 1 cut(s) 796
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.