RLG00000020438

Xylosyltransferase 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0016897
Physical Location & Seq
Forward (+)
64967633 .. 64969572
1940 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020438

Sequence Viewer

Length: 1287 bp
ATGAGACAATCATGCTCAAACACTGTTACTTGGTGTTCAGGCTTTCCTCTATGGGTTCTGGTACTTGCAGCTACTTCAGTGTTGCTAGGAGCGTTATCTCTATCATCTCAAAGTGTGTTCTGTAGAGTAGGCAACAAGTACCAAATCTCAGAGAGGGTCCCATTAAAAGGAGACGGCAACCCTCCTGTCATTGCCTATTGGATTAGCAGTACTAAAGGAGAGAAAGGTGAGAAAATGCGAAGGCTGTTGAAGGCAATATATCATCCAAGAAACCAGTATCTGCTGCAACTTGATGCTGATTCATCAGATTACGAAAGAGAGCAGTTGGCTCTTTATGTTCAATCCCAAAGGGTGTTTCGAACCTTTGATAATGTCAACGTTGTTGGACAAAGTTATGGAATCAACCGGATGGGGTCCTCTTCTCTTGCTGCCACACTTCACGCTGCAGCATTGCTTCTAAAGCTTAGTGCAGATTGGGATTGGTTCATCGCATTAAGCGCTTCTGACTATCCCCTCATGCCTCAAGATGATCTGCTCCATGCTTTGACTTCATTGCCACGGAATCTCAATTTTATACATTTTACTAACAAGACTGGATGGAAAGAGCAGAAACGTATTGAAAAAATTGTTCTAGATCCTACTTTACATCTTCAGAATAGTACTCCAGTCAGTCCACTGAACTATTCCTTACATGAAAGAAGAGAAATCCCTGATGCTTTCGATGTATTTGGAGGTTCACCCTGGGGGATTCTAACTAGAGATTTCATGAAGTACTGTATCCAAGGGTGGGACAACTTTCCTAGAACGTTACTGATGTACCTCAGCAATGTGGTTTACCCTCTTCATTATTACTTCCACACAATCATCTGTAACTCATTCGAGTTCCAAAACTCTCTAGTAGATAATGATCTAAGCTTCATTGTTTGGAACTCAACTGCTTTTGGCGAAACTCAAGTCCTAAATATGTCGCACTATGATCAAATGCTAGCAAGTGGAGCAGCTTTTGCAAGACCGTTTCACGCAGGTGATCAAGTACTAAACAAGATCGATGAGAGCGTTTTGAATCGCTCTCCCAAAGGGTTGGTGCCCGGAGAATGGTGCCTTGGAGAAGGGAAAAGTATGAGGGTGCTGGAGAATTTAACAGCTGATCATGAAGAGCTCTGTCCAACCTGGGGTAACATTAACAATGTCAACCCGGGTTCTCGTGGCATTAATCTTGCTGCACTCTTGACCAATCTTGTTGTAGAAGGGAGATTCACTACCAGTCACTGCCGAGAACACTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00532 ko00534 ko01100 map00532 map00534 map01100
Pfam Domains
Protein Families
Branch

Protein Analysis

429

Amino Acids

48.4

Weight (kDa)

6.5

Isoelectric Point (pI)

38.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Branch PF02485 64 - 311 2e-54 Core-2/I-Branching enzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016897)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g37130
malus_domestica MD09G1161300.v1.1 MD17G1147100.v1.1
prunus_persica Prupe.3G020200_v2.0.a1
pyrus_communis pycom09g07980 pycom17g13980
rosa_chinensis RchiOBHm_Chr2g0149691
rosa_laevigata RLG00000020438
rosa_multiflora Rmu_sc0013937.1_g000003
rosa_roxburghii Rroxscaffold_2G00097790
rosa_rugosa Rorug02G0414700
rosa_samantha Rh2BG486500 Rh2DG495800
rosa_wichuraiana Rw2G038710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1013
Acc36I ACCTGC 1 cut(s) 1013
AccB1I GGYRCC 2 cut(s) 1084, 1098
AclI AACGTT 2 cut(s) 378, 806
AclWI GGATC 1 cut(s) 629
AcsI RAATTY 1 cut(s) 1135
AcuI CTGAAG 2 cut(s) 60, 635
AfaI GTAC 7 cut(s) 63, 140, 211, 661, 773, 818, 1035
AfeI AGCGCT 1 cut(s) 499
AfiI CCNNNNNNNGG 4 cut(s) 167, 787, 1095, 1172
AgsI TTSAA 4 cut(s) 250, 341, 620, 1063
AjnI CCWGG 2 cut(s) 740, 1169
AjuI GAANNNNNNNTTGG 4 cut(s) 339, 371, 1086, 1118
AleI CACNNNNGTG 1 cut(s) 1023
AluBI AGCT 6 cut(s) 71, 463, 915, 1001, 1145, 1159
AluI AGCT 6 cut(s) 71, 463, 915, 1001, 1145, 1159
Alw21I GWGCWC 1 cut(s) 1161
Alw26I GTCTC 1 cut(s) 165
AlwI GGATC 1 cut(s) 629
AlwNI CAGNNNCTG 2 cut(s) 280, 1269
Ama87I CYCGRG 1 cut(s) 1195
Aor51HI AGCGCT 1 cut(s) 499
ApeKI GCWGC 7 cut(s) 68, 283, 428, 443, 446, 998, 1220
ApoI RAATTY 1 cut(s) 1135
ArsI GACNNNNNNTTYG 2 cut(s) 939, 971
AseI ATTAAT 1 cut(s) 1212
AspLEI GCGC 1 cut(s) 500
AspS9I GGNCC 2 cut(s) 157, 414
AsuC2I CCSGG 3 cut(s) 1089, 1196, 1197
AsuHPI GGTGA 3 cut(s) 239, 729, 1037
AsuII TTCGAA 1 cut(s) 358
AsuNHI GCTAGC 1 cut(s) 985
AvaI CYCGRG 1 cut(s) 1195
AvaII GGWCC 2 cut(s) 157, 414
BaeGI GKGCMC 1 cut(s) 1089
BaeI ACNNNNGTAYC 2 cut(s) 800, 833
BanI GGYRCC 2 cut(s) 1084, 1098
BanII GRGCYC 1 cut(s) 1161
BauI CACGAG 1 cut(s) 1203
Bbv12I GWGCWC 1 cut(s) 1161
BbvCI CCTCAGC 1 cut(s) 821
BbvI GCAGC 7 cut(s) 80, 270, 415, 430, 458, 1010, 1207
BccI CCATC 2 cut(s) 403, 591
BceAI ACGGC 1 cut(s) 190
BciT130I CCWGG 2 cut(s) 742, 1171
BciVI GTATCC 1 cut(s) 788
BclI TGATCA 3 cut(s) 976, 1027, 1147
BcnI CCSGG 3 cut(s) 1089, 1196, 1197
BcoDI GTCTC 1 cut(s) 165
BfaI CTAG 6 cut(s) 86, 632, 756, 801, 896, 986
BfmI CTRYAG 2 cut(s) 121, 444
BfoI RGCGCY 1 cut(s) 501
BfuAI ACCTGC 1 cut(s) 1013
BfuI GTATCC 1 cut(s) 788
BisI GCNGC 7 cut(s) 69, 284, 429, 444, 447, 999, 1221
BlsI GCNGC 7 cut(s) 70, 285, 430, 445, 448, 1000, 1222
BmcAI AGTACT 4 cut(s) 211, 661, 773, 1035
Bme1390I CCNGG 5 cut(s) 742, 1089, 1171, 1196, 1197
Bme18I GGWCC 2 cut(s) 157, 414
BmeT110I CYCGRG 1 cut(s) 1195
BmgT120I GGNCC 2 cut(s) 157, 414
BmiI GGNNCC 5 cut(s) 158, 159, 415, 1086, 1100
BmrFI CCNGG 5 cut(s) 742, 1089, 1171, 1196, 1197
BmsI GCATC 2 cut(s) 283, 703
BmtI GCTAGC 1 cut(s) 989
BpmI CTGGAG 2 cut(s) 648, 1151
Bpu10I CCTNAGC 1 cut(s) 821
Bpu14I TTCGAA 1 cut(s) 358
BpuEI CTTGAG 2 cut(s) 507, 936
BpuMI CCSGG 3 cut(s) 1089, 1196, 1197
Bsa29I ATCGAT 1 cut(s) 1047
BsaBI GATNNNNATC 1 cut(s) 906
BsaJI CCNNGG 7 cut(s) 557, 740, 741, 781, 1102, 1170, 1195
BsaWI WCCGGW 1 cut(s) 405
Bsc4I CCNNNNNNNGG 4 cut(s) 167, 787, 1095, 1172
Bse1I ACTGG 5 cut(s) 274, 598, 665, 1263, 1286
Bse3DI GCAATG 4 cut(s) 189, 449, 551, 832
Bse8I GATNNNNATC 1 cut(s) 906
BseBI CCWGG 2 cut(s) 742, 1171
BseCI ATCGAT 1 cut(s) 1047
BseDI CCNNGG 7 cut(s) 557, 740, 741, 781, 1102, 1170, 1195
BseGI GGATG 3 cut(s) 262, 414, 602
BseJI GATNNNNATC 1 cut(s) 906
BseLI CCNNNNNNNGG 4 cut(s) 167, 787, 1095, 1172
BseMI GCAATG 4 cut(s) 189, 449, 551, 832
BseMII CTCAG 2 cut(s) 162, 835
BseNI ACTGG 5 cut(s) 274, 598, 665, 1263, 1286
BseSI GKGCMC 1 cut(s) 1089
BseXI GCAGC 7 cut(s) 80, 270, 415, 430, 458, 1010, 1207
BsgI GTGCAG 2 cut(s) 489, 1206
BshNI GGYRCC 2 cut(s) 1084, 1098
BshVI ATCGAT 1 cut(s) 1047
BsiHKAI GWGCWC 1 cut(s) 1161
BsiHKCI CYCGRG 1 cut(s) 1195
BsiSI CCGG 3 cut(s) 406, 1089, 1196
BslFI GGGAC 2 cut(s) 143, 803
BslI CCNNNNNNNGG 4 cut(s) 167, 787, 1095, 1172
BsmAI GTCTC 1 cut(s) 165
BsmBI CGTCTC 1 cut(s) 165
BsmFI GGGAC 2 cut(s) 143, 803
BsoBI CYCGRG 1 cut(s) 1195
Bsp119I TTCGAA 1 cut(s) 358
Bsp1286I GDGCHC 2 cut(s) 1089, 1161
Bsp143I GATC 7 cut(s) 529, 634, 907, 976, 1027, 1044, 1147
BspCNI CTCAG 2 cut(s) 161, 834
BspDI ATCGAT 1 cut(s) 1047
BspHI TCATGA 2 cut(s) 765, 1150
BspLI GGNNCC 5 cut(s) 158, 159, 415, 1086, 1100
BspMAI CTGCAG 1 cut(s) 448
BspMI ACCTGC 1 cut(s) 1013
BspOI GCTAGC 1 cut(s) 989
BspPI GGATC 1 cut(s) 629
BspQI GCTCTTC 1 cut(s) 1149
BspT104I TTCGAA 1 cut(s) 358
BspT107I GGYRCC 2 cut(s) 1084, 1098
BsrDI GCAATG 4 cut(s) 189, 449, 551, 832
BsrI ACTGG 5 cut(s) 274, 598, 665, 1263, 1286
BssECI CCNNGG 7 cut(s) 557, 740, 741, 781, 1102, 1170, 1195
BssMI GATC 7 cut(s) 529, 634, 907, 976, 1027, 1044, 1147
BssSI CACGAG 1 cut(s) 1203
BssT1I CCWWGG 2 cut(s) 781, 1102
Bst2BI CACGAG 1 cut(s) 1203
Bst2UI CCWGG 2 cut(s) 742, 1171
Bst4CI ACNGT 3 cut(s) 25, 776, 1014
Bst6I CTCTTC 4 cut(s) 424, 694, 846, 1149
BstAPI GCANNNNNTGC 1 cut(s) 1004
BstBI TTCGAA 1 cut(s) 358
BstC8I GCNNGC 1 cut(s) 987
BstDEI CTNAG 4 cut(s) 148, 464, 821, 911
BstDSI CCRYGG 1 cut(s) 557
BstF5I GGATG 3 cut(s) 262, 414, 602
BstH2I RGCGCY 1 cut(s) 501
BstHHI GCGC 1 cut(s) 500
BstKTI GATC 7 cut(s) 532, 637, 910, 979, 1030, 1047, 1150
BstMAI GTCTC 1 cut(s) 165
BstMBI GATC 7 cut(s) 529, 634, 907, 976, 1027, 1044, 1147
BstMWI GCNNNNNNNGC 4 cut(s) 460, 497, 995, 1004
BstNI CCWGG 2 cut(s) 742, 1171
BstSCI CCNGG 5 cut(s) 740, 1087, 1169, 1194, 1195
BstSFI CTRYAG 2 cut(s) 121, 444
BstSLI GKGCMC 1 cut(s) 1089
BstV1I GCAGC 7 cut(s) 80, 270, 415, 430, 458, 1010, 1207
BstX2I RGATCY 1 cut(s) 634
BstXI CCANNNNNNTGG 1 cut(s) 1081
BstYI RGATCY 1 cut(s) 634
Bsu15I ATCGAT 1 cut(s) 1047
BsuI GTATCC 1 cut(s) 788
BsuTUI ATCGAT 1 cut(s) 1047
BtgI CCRYGG 1 cut(s) 557
BtgZI GCGATG 1 cut(s) 472
BtsCI GGATG 3 cut(s) 262, 414, 602
BtsI GCAGTG 1 cut(s) 1267
BtsIMutI CAGTG 5 cut(s) 21, 84, 674, 1267, 1279
BveI ACCTGC 1 cut(s) 1013
Cac8I GCNNGC 1 cut(s) 987
CaiI CAGNNNCTG 2 cut(s) 280, 1269
CciI TCATGA 2 cut(s) 765, 1150
CfoI GCGC 1 cut(s) 500
Cfr13I GGNCC 2 cut(s) 157, 414
Cfr9I CCCGGG 1 cut(s) 1195
ClaI ATCGAT 1 cut(s) 1047
Csp6I GTAC 7 cut(s) 62, 139, 210, 660, 772, 817, 1034
CviAII CATG 6 cut(s) 12, 517, 539, 692, 766, 1151
CviJI RGCY 9 cut(s) 42, 71, 244, 329, 463, 915, 1001, 1145, 1159
CviKI_1 RGCY 9 cut(s) 42, 71, 244, 329, 463, 915, 1001, 1145, 1159
CviQI GTAC 7 cut(s) 62, 139, 210, 660, 772, 817, 1034
DdeI CTNAG 4 cut(s) 148, 464, 821, 911
DpnI GATC 7 cut(s) 531, 636, 909, 978, 1029, 1046, 1149
DpnII GATC 7 cut(s) 529, 634, 907, 976, 1027, 1044, 1147
Eam1104I CTCTTC 4 cut(s) 424, 694, 846, 1149
EarI CTCTTC 4 cut(s) 424, 694, 846, 1149
Ecl136II GAGCTC 1 cut(s) 1159
Eco130I CCWWGG 2 cut(s) 781, 1102
Eco24I GRGCYC 1 cut(s) 1161
Eco47I GGWCC 2 cut(s) 157, 414
Eco47III AGCGCT 1 cut(s) 499
Eco53kI GAGCTC 1 cut(s) 1159
Eco57I CTGAAG 2 cut(s) 60, 635
Eco88I CYCGRG 1 cut(s) 1195
EcoICRI GAGCTC 1 cut(s) 1159
EcoO109I RGGNCCY 2 cut(s) 157, 414
EcoRII CCWGG 2 cut(s) 740, 1169
EcoT14I CCWWGG 2 cut(s) 781, 1102
EcoT38I GRGCYC 1 cut(s) 1161
ErhI CCWWGG 2 cut(s) 781, 1102
Esp3I CGTCTC 1 cut(s) 165
FaeI CATG 6 cut(s) 15, 520, 542, 695, 769, 1154
FaqI GGGAC 2 cut(s) 143, 803
FatI CATG 6 cut(s) 11, 516, 538, 691, 765, 1150
FbaI TGATCA 3 cut(s) 976, 1027, 1147
Fnu4HI GCNGC 7 cut(s) 69, 284, 429, 444, 447, 999, 1221
FokI GGATG 3 cut(s) 249, 421, 609
FriOI GRGCYC 1 cut(s) 1161
Fsp4HI GCNGC 7 cut(s) 69, 284, 429, 444, 447, 999, 1221
FspBI CTAG 6 cut(s) 86, 632, 756, 801, 896, 986
GlaI GCGC 1 cut(s) 499
GluI GCNGC 7 cut(s) 69, 284, 429, 444, 447, 999, 1221
GsuI CTGGAG 2 cut(s) 648, 1151
HaeII RGCGCY 1 cut(s) 501
HapII CCGG 3 cut(s) 406, 1089, 1196
HhaI GCGC 1 cut(s) 500
Hin1II CATG 6 cut(s) 15, 520, 542, 695, 769, 1154
Hin6I GCGC 1 cut(s) 498
HinP1I GCGC 1 cut(s) 498
HincII GTYRAC 2 cut(s) 376, 1192
HindII GTYRAC 2 cut(s) 376, 1192
HindIII AAGCTT 2 cut(s) 461, 913
HinfI GANTC 6 cut(s) 299, 399, 562, 748, 1063, 1254
HpaII CCGG 3 cut(s) 406, 1089, 1196
HphI GGTGA 3 cut(s) 239, 729, 1037
Hpy166II GTNNAC 5 cut(s) 376, 674, 737, 835, 1192
Hpy188I TCNGA 4 cut(s) 151, 307, 505, 654
Hpy188III TCNNGA 5 cut(s) 524, 632, 766, 1151, 1228
Hpy8I GTNNAC 5 cut(s) 376, 674, 737, 835, 1192
HpyAV CCTTC 4 cut(s) 234, 244, 1103, 1241
HpyCH4III ACNGT 3 cut(s) 25, 776, 1014
HpyCH4IV ACGT 3 cut(s) 378, 613, 806
HpyCH4V TGCA 6 cut(s) 68, 286, 446, 470, 1007, 1223
HpyF10VI GCNNNNNNNGC 4 cut(s) 460, 497, 995, 1004
HpyF3I CTNAG 4 cut(s) 148, 464, 821, 911
HpySE526I ACGT 3 cut(s) 378, 613, 806
Hsp92II CATG 6 cut(s) 15, 520, 542, 695, 769, 1154
HspAI GCGC 1 cut(s) 498
KflI GGGWCCC 1 cut(s) 157
Ksp22I TGATCA 3 cut(s) 976, 1027, 1147
Kzo9I GATC 7 cut(s) 529, 634, 907, 976, 1027, 1044, 1147
LguI GCTCTTC 1 cut(s) 1149
LmnI GCTCC 3 cut(s) 89, 540, 995
Lsp1109I GCAGC 7 cut(s) 80, 270, 415, 430, 458, 1010, 1207
LweI GCATC 2 cut(s) 283, 703
MaeI CTAG 6 cut(s) 86, 632, 756, 801, 896, 986
MaeII ACGT 3 cut(s) 378, 613, 806
MaeIII GTNAC 5 cut(s) 25, 807, 869, 1175, 1265
MalI GATC 7 cut(s) 531, 636, 909, 978, 1029, 1046, 1149
MboI GATC 7 cut(s) 529, 634, 907, 976, 1027, 1044, 1147
MboII GAAGA 5 cut(s) 411, 641, 711, 833, 1166
MflI RGATCY 1 cut(s) 634
MhlI GDGCHC 2 cut(s) 1089, 1161
MluCI AATT 3 cut(s) 568, 624, 1135
MmeI TCCRAC 2 cut(s) 364, 1190
MseI TTAA 5 cut(s) 164, 494, 1139, 1182, 1212
MslI CAYNNNNRTG 1 cut(s) 1023
MspA1I CMGCKG 1 cut(s) 1145
MspI CCGG 3 cut(s) 406, 1089, 1196
MspR9I CCNGG 5 cut(s) 742, 1089, 1171, 1196, 1197
MvaI CCWGG 2 cut(s) 742, 1171
MwoI GCNNNNNNNGC 4 cut(s) 460, 497, 995, 1004
NciI CCSGG 3 cut(s) 1089, 1196, 1197
NdeII GATC 7 cut(s) 529, 634, 907, 976, 1027, 1044, 1147
NheI GCTAGC 1 cut(s) 985
NlaIII CATG 6 cut(s) 15, 520, 542, 695, 769, 1154
NlaIV GGNNCC 5 cut(s) 158, 159, 415, 1086, 1100
NmuCI GTSAC 1 cut(s) 1265
NspV TTCGAA 1 cut(s) 358
OliI CACNNNNGTG 1 cut(s) 1023
PagI TCATGA 2 cut(s) 765, 1150
PaqCI CACCTGC 1 cut(s) 1013
PasI CCCWGGG 1 cut(s) 741
PciSI GCTCTTC 1 cut(s) 1149
PcsI WCGNNNNNNNCGW 1 cut(s) 1053
PfeI GAWTC 6 cut(s) 299, 399, 562, 748, 1063, 1254
PkrI GCNGC 7 cut(s) 70, 285, 430, 445, 448, 1000, 1222
PpuMI RGGWCCY 2 cut(s) 157, 414
PshBI ATTAAT 1 cut(s) 1212
Psp124BI GAGCTC 1 cut(s) 1161
Psp1406I AACGTT 2 cut(s) 378, 806
Psp5II RGGWCCY 2 cut(s) 157, 414
Psp6I CCWGG 2 cut(s) 740, 1169
PspGI CCWGG 2 cut(s) 740, 1169
PspN4I GGNNCC 5 cut(s) 158, 159, 415, 1086, 1100
PspPI GGNCC 2 cut(s) 157, 414
PspPPI RGGWCCY 2 cut(s) 157, 414
PstI CTGCAG 1 cut(s) 448
PstNI CAGNNNCTG 2 cut(s) 280, 1269
PsuI RGATCY 1 cut(s) 634
PvuII CAGCTG 1 cut(s) 1145
RsaI GTAC 7 cut(s) 63, 140, 211, 661, 773, 818, 1035
RsaNI GTAC 7 cut(s) 62, 139, 210, 660, 772, 817, 1034
RseI CAYNNNNRTG 1 cut(s) 1023
SacI GAGCTC 1 cut(s) 1161
SapI GCTCTTC 1 cut(s) 1149
SaqAI TTAA 5 cut(s) 164, 494, 1139, 1182, 1212
SatI GCNGC 7 cut(s) 69, 284, 429, 444, 447, 999, 1221
Sau3AI GATC 7 cut(s) 529, 634, 907, 976, 1027, 1044, 1147
Sau96I GGNCC 2 cut(s) 157, 414
ScaI AGTACT 4 cut(s) 211, 661, 773, 1035
ScrFI CCNGG 5 cut(s) 742, 1089, 1171, 1196, 1197
SduI GDGCHC 2 cut(s) 1089, 1161
SfaNI GCATC 2 cut(s) 283, 703
SfcI CTRYAG 2 cut(s) 121, 444
SfuI TTCGAA 1 cut(s) 358
SinI GGWCC 2 cut(s) 157, 414
SmaI CCCGGG 1 cut(s) 1197
SmiMI CAYNNNNRTG 1 cut(s) 1023
SmlI CTYRAG 2 cut(s) 522, 951
SmoI CTYRAG 2 cut(s) 522, 951
Sse9I AATT 3 cut(s) 568, 624, 1135
SspMI CTAG 6 cut(s) 86, 632, 756, 801, 896, 986
SstI GAGCTC 1 cut(s) 1161
StyD4I CCNGG 5 cut(s) 740, 1087, 1169, 1194, 1195
StyI CCWWGG 2 cut(s) 781, 1102
TaaI ACNGT 3 cut(s) 25, 776, 1014
TaiI ACGT 3 cut(s) 381, 616, 809
TaqI TCGA 4 cut(s) 358, 720, 879, 1047
TasI AATT 3 cut(s) 568, 624, 1135
TatI WGTACW 4 cut(s) 209, 659, 771, 1033
TfiI GAWTC 6 cut(s) 299, 399, 562, 748, 1063, 1254
Tru1I TTAA 5 cut(s) 164, 494, 1139, 1182, 1212
Tru9I TTAA 5 cut(s) 164, 494, 1139, 1182, 1212
TscAI CASTG 5 cut(s) 28, 84, 681, 1274, 1286
TseFI GTSAC 1 cut(s) 1265
TseI GCWGC 7 cut(s) 68, 283, 428, 443, 446, 998, 1220
Tsp45I GTSAC 1 cut(s) 1265
TspDTI ATGAA 9 cut(s) 291, 475, 540, 708, 754, 782, 833, 907, 1167
TspGWI ACGGA 1 cut(s) 574
TspMI CCCGGG 1 cut(s) 1195
TspRI CASTG 5 cut(s) 28, 84, 681, 1274, 1286
VpaK11BI GGWCC 2 cut(s) 157, 414
VspI ATTAAT 1 cut(s) 1212
XapI RAATTY 1 cut(s) 1135
XbaI TCTAGA 1 cut(s) 631
XmaI CCCGGG 1 cut(s) 1195
XspI CTAG 6 cut(s) 86, 632, 756, 801, 896, 986
ZrmI AGTACT 4 cut(s) 211, 661, 773, 1035
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.