Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0011745

Physical Location & Seq

Genomic Coordinates Reverse (-)

74771361 .. 74775655

Gene Structure 4295 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021388

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGGCCGCAGCAACAGTAGAAGCTCAGCCATCCAGATCTTCATCAAATGGGCCTGCAGATTCCTACATCGGCAGCCTGATCAGCCTCACCTCCAAGTCCGAAATTCGCTACGAGGGTGTCCTCTTCAACATCAATACCCAAGAGTCCAGCATCGGCTTGAGAAATGTAAGATCGTTTGGGACTGAAGGGCGCAAAATGGATGGTCCACAAATACCTCCAAGTGATAAAGTTTATGAGTATATACTTTTCCGAGGAAGTGACATCAAGGATCTGCAGGTCAAATCTTCGTCTCCGGTTCAAACTAACACACCTGTACACGATGATCCTGCCATTATTCAGACTCACTATTCTCAAGCAGTGACTGCGTCGACAAGCTTACCATCTTCTGGACTTGCATCCATTCCAGATATTAGTGCCCACACTCCACAGATGGGACTCCCTAAGACAACATTTCAAAGCAGTCTTCCCATGTATCAACCTCTTGGAAGTCTAGGATCTTGGGGTTCCTCAGCCCCTCCAACTACAAATGGCAGTGGATTTCCCATGACAATGTATTGGCAAGGATTCTCTGGGCCCTCAAATGGATTTCAACACCAACAGCAATCTTTGCTGATGCCCTCGCCCGGCTTGTCAATGCCACCTTCTATACAACAACCAATGCTATATCCTACCATTAATGCATCATTGTCTGCTGGATCTTCTGGTCCTTCAACCTCTAAACCATCAGAATCACCCTCAGCTTTCTTGCCACCCTTTGGTATGGGCACTCCAAACTTGCATTCGCATATGCTTCCTGCCCAGTTGCCTGCCCTTACTATAGGCACTCCGGGGGATTTGCAATCTTCTATGTTTCCTTCCAAGTCTTCTGCAACAGTTTCAGAGTCATCCTCAAGTTTGATTCTTAATAAGGCTTCTCCTCCAACTCTTCATACTGCTACATCAATTTCTAGTTTGCCCTTGGTTTCACCACTGACTCCTGCTTTGGACAAAACTAACATCCTATTACCAGCCTCTGACAAGCCTAAAACAGGCCCTACTGCTGTAATGCCAGTAACATCTGAATCTGTCTCGTCCATGGCTTGGACACCAGGTTCAATTTTAGCTGAGGGAGCAATGCCTCCATTGGTAACCCCAGGCCAGTTTTTTCAGCCTGAGCTCACCATGGTATCTTCACCCCAGCCTTCACAAACAGCTCAGAGGGATGTTGAGGTAGTCAAGGTATCATCATCAGAACTACCACCATCACCACCAGCAGCAGCAAAGGATTCCCAGGAACCAATATTGCCTCTGCCTACACAATCCATTCCTAAGCTGCATGGAGCTCATGAGTTTGCTCATCAAAGTTACAGAGGAGGTCGTGAAAGAGGGGGTCATGCCTTCACTCATCAAAGTTATAGAGAAGGACGTGAAAGAGGAGGCCATGCCTTCACTCATCAAAGTTATAGAGGAGGACGTGAAAGAGGAGGTCATGCCTTCATTCATCAGAGTAATAGAGGAAGTGAAAGAGGTAGAGGAAACAGGATATCACGTCCTGTGACTAGATTCACCGAGGATTTTGATTTCACTGCAATGAATGAGAAATTCAACAAGGATGAAGTATGGGGTGATCTCGGAAGAAGTAATAAAGGGCTAGAAGATGGAGGTGAATCACAAGATGAAGAGGATGTCGGAGCTTCACCATGTGATGATACAAAGAATGTTTATGTTAAGGATGACTTCTTTGATTCTCTTTCCTGTGATGCACTTGATCGTGGGTCACATAATGGGAGGCCCAAGTTCTCGGAACAAATGAAAAAGGATACTGAGACATTTGGCTATTCTCCAAGGCATCGGGGTGGAAGAGGTGGGCGATGGAATGGTCGAGGTGGGCGATGGAATGGTGGTTATCATGGAAGCGGTTATGGCTATGCCGGACAGGGCCGAGGACATAACTTTCCTAATCGTGCCAGCTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FDF LSM14

Protein Analysis

652

Amino Acids

69.67

Weight (kDa)

7.07

Isoelectric Point (pI)

61.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SM-ATX	PF14438	21 - 94	8.1e-11	Ataxin 2 SM domain
LSM14	PF12701	22 - 95	2.8e-32	Scd6-like Sm domain
FDF	PF09532	515 - 605	9.9e-20	FDF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011745)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19360 AT4G19360
fragaria_vesca	FvH4_6g45450 FvH4_6g45450 FvH4_6g45450 FvH4_6g45450 FvH4_6g45450
rosa_chinensis	RchiOBHm_Chr2g0163281
rosa_laevigata	RLG00000021388
rosa_multiflora	Rmu_co8413003.1_g000001 Rmu_sc0002045.1_g000008
rosa_roxburghii	Rroxscaffold_2G00087410
rosa_rugosa	Rorug02G0502000
rosa_samantha	Rh2AG568800 Rh2BG580900 Rh2CG406800 Rh2CG550500 Rh2DG590800
rosa_wichuraiana	Rw2G047060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	265
AccB7I	CCANNNNNTGG	3 cut(s)	386, 755, 1080
AccI	GTMKAC	1 cut(s)	368
AciI	CCGC	2 cut(s)	6, 1896
AclWI	GGATC	4 cut(s)	276, 317, 502, 703
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	102, 1580
AcuI	CTGAAG	1 cut(s)	204
AdeI	CACNNNGTG	1 cut(s)	1682
AfaI	GTAC	1 cut(s)	315
AfiI	CCNNNNNNNGG	7 cut(s)	386, 431, 581, 623, 755, 1028, 1080
AgsI	TTSAA	7 cut(s)	127, 299, 455, 590, 711, 1095, 1585
AjiI	CACGTC	3 cut(s)	1406, 1454, 1529
AjnI	CCWGG	3 cut(s)	1087, 1132, 1269
AjuI	GAANNNNNNNTTGG	2 cut(s)	763, 795
AloI	GAACNNNNNNTCC	2 cut(s)	1075, 1107
Alw21I	GWGCWC	2 cut(s)	1158, 1324
Alw26I	GTCTC	3 cut(s)	294, 1072, 1799
AlwI	GGATC	4 cut(s)	276, 317, 502, 703
AlwNI	CAGNNNCTG	2 cut(s)	362, 1013
AoxI	GGCC	8 cut(s)	3, 50, 572, 1030, 1135, 1417, 1769, 1918
ApaI	GGGCCC	1 cut(s)	576
ApeKI	GCWGC	5 cut(s)	8, 72, 1253, 1256, 1312
ApoI	RAATTY	2 cut(s)	102, 1580
ArsI	GACNNNNNNTTYG	2 cut(s)	964, 996
AseI	ATTAAT	1 cut(s)	675
AspLEI	GCGC	1 cut(s)	192
AspS9I	GGNCC	8 cut(s)	50, 203, 572, 573, 704, 1031, 1770, 1918
AsuC2I	CCSGG	2 cut(s)	624, 828
AvaII	GGWCC	2 cut(s)	203, 704
BaeGI	GKGCMC	3 cut(s)	418, 576, 767
BaeI	ACNNNNGTAYC	2 cut(s)	1149, 1182
BanII	GRGCYC	3 cut(s)	576, 1158, 1324
BbsI	GAAGAC	2 cut(s)	455, 855
Bbv12I	GWGCWC	2 cut(s)	1158, 1324
BbvCI	CCTCAGC	3 cut(s)	508, 736, 1104
BbvI	GCAGC	5 cut(s)	20, 84, 1265, 1268, 1299
BccI	CCATC	9 cut(s)	37, 194, 388, 424, 730, 1249, 1631, 1845, 1866
BcgI	CGANNNNNNTGC	2 cut(s)	308, 342
BciT130I	CCWGG	3 cut(s)	1089, 1134, 1271
BciVI	GTATCC	1 cut(s)	1792
BclI	TGATCA	1 cut(s)	78
BcnI	CCSGG	2 cut(s)	624, 828
BcoDI	GTCTC	3 cut(s)	294, 1072, 1799
BfaI	CTAG	4 cut(s)	491, 948, 1539, 1631
BfmI	CTRYAG	3 cut(s)	54, 272, 816
BfuAI	ACCTGC	1 cut(s)	265
BfuI	GTATCC	1 cut(s)	1792
BglII	AGATCT	1 cut(s)	35
BisI	GCNGC	6 cut(s)	6, 9, 73, 1254, 1257, 1313
BlpI	GCTNAGC	1 cut(s)	24
BlsI	GCNGC	6 cut(s)	7, 10, 74, 1255, 1258, 1314
Bme1390I	CCNGG	5 cut(s)	624, 828, 1089, 1134, 1271
Bme18I	GGWCC	2 cut(s)	203, 704
BmgBI	CACGTC	3 cut(s)	1406, 1454, 1529
BmgT120I	GGNCC	8 cut(s)	50, 203, 572, 573, 704, 1031, 1770, 1918
BmiI	GGNNCC	3 cut(s)	505, 574, 1275
BmrFI	CCNGG	5 cut(s)	624, 828, 1089, 1134, 1271
BmrI	ACTGGG	1 cut(s)	793
BmsI	GCATC	6 cut(s)	159, 404, 603, 689, 1729, 1837
BmuI	ACTGGG	1 cut(s)	793
BpiI	GAAGAC	2 cut(s)	455, 855
BplI	GAGNNNNNCTC	2 cut(s)	872, 904
Bpu10I	CCTNAGC	5 cut(s)	508, 736, 1104, 1152, 1308
Bpu1102I	GCTNAGC	1 cut(s)	24
BpuEI	CTTGAG	3 cut(s)	178, 336, 874
BpuMI	CCSGG	2 cut(s)	624, 828
BsaBI	GATNNNNATC	1 cut(s)	40
BsaWI	WCCGGW	1 cut(s)	292
Bsc4I	CCNNNNNNNGG	7 cut(s)	386, 431, 581, 623, 755, 1028, 1080
Bse1I	ACTGG	3 cut(s)	799, 1049, 1138
Bse3DI	GCAATG	2 cut(s)	1119, 1575
Bse8I	GATNNNNATC	1 cut(s)	40
BseBI	CCWGG	3 cut(s)	1089, 1134, 1271
BseGI	GGATG	9 cut(s)	29, 205, 395, 884, 996, 1207, 1597, 1669, 1717
BseJI	GATNNNNATC	1 cut(s)	40
BseLI	CCNNNNNNNGG	7 cut(s)	386, 431, 581, 623, 755, 1028, 1080
BseMI	GCAATG	2 cut(s)	1119, 1575
BseMII	CTCAG	7 cut(s)	38, 522, 750, 1095, 1143, 1208, 1794
BseNI	ACTGG	3 cut(s)	799, 1049, 1138
BseRI	GAGGAG	5 cut(s)	906, 1365, 1428, 1461, 1476
BseSI	GKGCMC	3 cut(s)	418, 576, 767
BseXI	GCAGC	5 cut(s)	20, 84, 1265, 1268, 1299
BseYI	CCCAGC	1 cut(s)	1176
BshFI	GGCC	8 cut(s)	5, 52, 574, 1032, 1137, 1419, 1771, 1920
BsiHKAI	GWGCWC	2 cut(s)	1158, 1324
BsiSI	CCGG	4 cut(s)	293, 624, 827, 1911
BslFI	GGGAC	2 cut(s)	193, 447
BslI	CCNNNNNNNGG	7 cut(s)	386, 431, 581, 623, 755, 1028, 1080
BsmAI	GTCTC	3 cut(s)	294, 1072, 1799
BsmBI	CGTCTC	1 cut(s)	294
BsmFI	GGGAC	2 cut(s)	193, 447
BsmI	GAATGC	1 cut(s)	778
BsnI	GGCC	8 cut(s)	5, 52, 574, 1032, 1137, 1419, 1771, 1920
Bsp120I	GGGCCC	1 cut(s)	572
Bsp1286I	GDGCHC	5 cut(s)	418, 576, 767, 1158, 1324
Bsp1407I	TGTACA	1 cut(s)	313
Bsp143I	GATC	9 cut(s)	35, 78, 170, 268, 322, 494, 695, 1606, 1747
Bsp1720I	GCTNAGC	1 cut(s)	24
Bsp19I	CCATGG	2 cut(s)	1074, 1161
BspACI	CCGC	2 cut(s)	6, 1896
BspANI	GGCC	8 cut(s)	5, 52, 574, 1032, 1137, 1419, 1771, 1920
BspCNI	CTCAG	7 cut(s)	37, 521, 749, 1096, 1144, 1207, 1795
BspHI	TCATGA	1 cut(s)	1324
BspLI	GGNNCC	3 cut(s)	505, 574, 1275
BspMAI	CTGCAG	2 cut(s)	58, 276
BspMI	ACCTGC	1 cut(s)	265
BspPI	GGATC	4 cut(s)	276, 317, 502, 703
BsrDI	GCAATG	2 cut(s)	1119, 1575
BsrGI	TGTACA	1 cut(s)	313
BsrI	ACTGG	3 cut(s)	799, 1049, 1138
BssMI	GATC	9 cut(s)	35, 78, 170, 268, 322, 494, 695, 1606, 1747
BssT1I	CCWWGG	4 cut(s)	957, 1074, 1161, 1823
Bst2UI	CCWGG	3 cut(s)	1089, 1134, 1271
Bst4CI	ACNGT	2 cut(s)	16, 874
Bst6I	CTCTTC	4 cut(s)	128, 930, 1653, 1834
BstAPI	GCANNNNNTGC	2 cut(s)	362, 607
BstAUI	TGTACA	1 cut(s)	313
BstC8I	GCNNGC	3 cut(s)	54, 807, 1948
BstDEI	CTNAG	9 cut(s)	24, 441, 508, 736, 1104, 1152, 1194, 1308, 1803
BstDSI	CCRYGG	2 cut(s)	1074, 1161
BstEII	GGTNACC	1 cut(s)	1126
BstENI	CCTNNNNNAGG	1 cut(s)	1026
BstF5I	GGATG	9 cut(s)	29, 205, 395, 884, 996, 1207, 1597, 1669, 1717
BstHHI	GCGC	1 cut(s)	192
BstKTI	GATC	9 cut(s)	38, 81, 173, 271, 325, 497, 698, 1609, 1750
BstMAI	GTCTC	3 cut(s)	294, 1072, 1799
BstMBI	GATC	9 cut(s)	35, 78, 170, 268, 322, 494, 695, 1606, 1747
BstMWI	GCNNNNNNNGC	5 cut(s)	81, 362, 607, 1109, 1902
BstNI	CCWGG	3 cut(s)	1089, 1134, 1271
BstPI	GGTNACC	1 cut(s)	1126
BstSCI	CCNGG	5 cut(s)	622, 826, 1087, 1132, 1269
BstSFI	CTRYAG	3 cut(s)	54, 272, 816
BstSLI	GKGCMC	3 cut(s)	418, 576, 767
BstV1I	GCAGC	5 cut(s)	20, 84, 1265, 1268, 1299
BstV2I	GAAGAC	2 cut(s)	455, 855
BstX2I	RGATCY	4 cut(s)	35, 268, 494, 695
BstYI	RGATCY	4 cut(s)	35, 268, 494, 695
BsuI	GTATCC	1 cut(s)	1792
BsuRI	GGCC	8 cut(s)	5, 52, 574, 1032, 1137, 1419, 1771, 1920
BtgI	CCRYGG	2 cut(s)	1074, 1161
BtgZI	GCGATG	2 cut(s)	1864, 1885
BtrI	CACGTC	3 cut(s)	1406, 1454, 1529
BtsCI	GGATG	9 cut(s)	29, 205, 395, 884, 996, 1207, 1597, 1669, 1717
BtsI	GCAGTG	3 cut(s)	363, 538, 1563
BtsIMutI	CAGTG	4 cut(s)	363, 538, 968, 1563
BveI	ACCTGC	1 cut(s)	265
Cac8I	GCNNGC	3 cut(s)	54, 807, 1948
CaiI	CAGNNNCTG	2 cut(s)	362, 1013
CciI	TCATGA	1 cut(s)	1324
CfoI	GCGC	1 cut(s)	192
Cfr13I	GGNCC	8 cut(s)	50, 203, 572, 573, 704, 1031, 1770, 1918
CseI	GACGC	1 cut(s)	354
CsiI	ACCWGGT	1 cut(s)	1087
Csp6I	GTAC	1 cut(s)	314
CviQI	GTAC	1 cut(s)	314
DdeI	CTNAG	9 cut(s)	24, 441, 508, 736, 1104, 1152, 1194, 1308, 1803
DpnI	GATC	9 cut(s)	37, 80, 172, 270, 324, 496, 697, 1608, 1749
DpnII	GATC	9 cut(s)	35, 78, 170, 268, 322, 494, 695, 1606, 1747
DraIII	CACNNNGTG	1 cut(s)	1682
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	4 cut(s)	128, 930, 1653, 1834
EarI	CTCTTC	4 cut(s)	128, 930, 1653, 1834
Ecl136II	GAGCTC	2 cut(s)	1156, 1322
Eco130I	CCWWGG	4 cut(s)	957, 1074, 1161, 1823
Eco24I	GRGCYC	3 cut(s)	576, 1158, 1324
Eco32I	GATATC	1 cut(s)	1524
Eco47I	GGWCC	2 cut(s)	203, 704
Eco53kI	GAGCTC	2 cut(s)	1156, 1322
Eco57I	CTGAAG	1 cut(s)	204
Eco91I	GGTNACC	1 cut(s)	1126
EcoICRI	GAGCTC	2 cut(s)	1156, 1322
EcoNI	CCTNNNNNAGG	1 cut(s)	1026
EcoO109I	RGGNCCY	2 cut(s)	573, 1031
EcoO65I	GGTNACC	1 cut(s)	1126
EcoRII	CCWGG	3 cut(s)	1087, 1132, 1269
EcoRV	GATATC	1 cut(s)	1524
EcoT14I	CCWWGG	4 cut(s)	957, 1074, 1161, 1823
EcoT22I	ATGCAT	1 cut(s)	682
EcoT38I	GRGCYC	3 cut(s)	576, 1158, 1324
ErhI	CCWWGG	4 cut(s)	957, 1074, 1161, 1823
Esp3I	CGTCTC	1 cut(s)	294
FalI	AAGNNNNNCTT	2 cut(s)	1700, 1732
FaqI	GGGAC	2 cut(s)	193, 447
FauNDI	CATATG	1 cut(s)	786
FbaI	TGATCA	1 cut(s)	78
FblI	GTMKAC	1 cut(s)	368
Fnu4HI	GCNGC	6 cut(s)	6, 9, 73, 1254, 1257, 1313
FokI	GGATG	9 cut(s)	16, 212, 382, 871, 983, 1214, 1604, 1676, 1724
FriOI	GRGCYC	3 cut(s)	576, 1158, 1324
Fsp4HI	GCNGC	6 cut(s)	6, 9, 73, 1254, 1257, 1313
FspBI	CTAG	4 cut(s)	491, 948, 1539, 1631
GlaI	GCGC	1 cut(s)	191
GluI	GCNGC	6 cut(s)	6, 9, 73, 1254, 1257, 1313
GsaI	CCCAGC	1 cut(s)	1180
HaeIII	GGCC	8 cut(s)	5, 52, 574, 1032, 1137, 1419, 1771, 1920
HapII	CCGG	4 cut(s)	293, 624, 827, 1911
HgaI	GACGC	1 cut(s)	354
HhaI	GCGC	1 cut(s)	192
Hin6I	GCGC	1 cut(s)	190
HinP1I	GCGC	1 cut(s)	190
HincII	GTYRAC	1 cut(s)	369
HindII	GTYRAC	1 cut(s)	369
HindIII	AAGCTT	1 cut(s)	373
HpaII	CCGG	4 cut(s)	293, 624, 827, 1911
Hpy166II	GTNNAC	3 cut(s)	206, 316, 369
Hpy188III	TCNNGA	5 cut(s)	33, 387, 404, 1325, 1358
Hpy8I	GTNNAC	3 cut(s)	206, 316, 369
Hpy99I	CGWCG	1 cut(s)	370
HpyAV	CCTTC	9 cut(s)	179, 651, 717, 864, 1191, 1387, 1394, 1435, 1483
HpyCH4III	ACNGT	2 cut(s)	16, 874
HpyCH4IV	ACGT	3 cut(s)	1405, 1453, 1528
HpyF10VI	GCNNNNNNNGC	5 cut(s)	81, 362, 607, 1109, 1902
HpyF3I	CTNAG	9 cut(s)	24, 441, 508, 736, 1104, 1152, 1194, 1308, 1803
HpySE526I	ACGT	3 cut(s)	1405, 1453, 1528
HspAI	GCGC	1 cut(s)	190
Ksp22I	TGATCA	1 cut(s)	78
Kzo9I	GATC	9 cut(s)	35, 78, 170, 268, 322, 494, 695, 1606, 1747
LmnI	GCTCC	3 cut(s)	1109, 1319, 1670
Lsp1109I	GCAGC	5 cut(s)	20, 84, 1265, 1268, 1299
LweI	GCATC	6 cut(s)	159, 404, 603, 689, 1729, 1837
MabI	ACCWGGT	1 cut(s)	1087
MaeI	CTAG	4 cut(s)	491, 948, 1539, 1631
MaeII	ACGT	3 cut(s)	1405, 1453, 1528
MaeIII	GTNAC	7 cut(s)	257, 358, 1051, 1126, 1343, 1534, 1755
MalI	GATC	9 cut(s)	37, 80, 172, 270, 324, 496, 697, 1608, 1749
MboI	GATC	9 cut(s)	35, 78, 170, 268, 322, 494, 695, 1606, 1747
MflI	RGATCY	4 cut(s)	35, 268, 494, 695
MhlI	GDGCHC	5 cut(s)	418, 576, 767, 1158, 1324
MluCI	AATT	4 cut(s)	102, 942, 1095, 1580
MlyI	GAGTC	5 cut(s)	152, 334, 429, 890, 967
MmeI	TCCRAC	3 cut(s)	542, 944, 1648
Mph1103I	ATGCAT	1 cut(s)	682
MseI	TTAA	3 cut(s)	675, 903, 1707
MslI	CAYNNNNRTG	3 cut(s)	548, 1568, 1833
MspI	CCGG	4 cut(s)	293, 624, 827, 1911
MspR9I	CCNGG	5 cut(s)	624, 828, 1089, 1134, 1271
Mva1269I	GAATGC	1 cut(s)	778
MvaI	CCWGG	3 cut(s)	1089, 1134, 1271
MwoI	GCNNNNNNNGC	5 cut(s)	81, 362, 607, 1109, 1902
NciI	CCSGG	2 cut(s)	624, 828
NcoI	CCATGG	2 cut(s)	1074, 1161
NdeI	CATATG	1 cut(s)	786
NdeII	GATC	9 cut(s)	35, 78, 170, 268, 322, 494, 695, 1606, 1747
NlaIV	GGNNCC	3 cut(s)	505, 574, 1275
NmeAIII	GCCGAG	1 cut(s)	1946
NmuCI	GTSAC	4 cut(s)	257, 358, 1534, 1755
NsiI	ATGCAT	1 cut(s)	682
PagI	TCATGA	1 cut(s)	1324
PcsI	WCGNNNNNNNCGW	1 cut(s)	1867
PctI	GAATGC	1 cut(s)	778
PfeI	GAWTC	9 cut(s)	59, 564, 728, 898, 1061, 1265, 1542, 1646, 1724
PflFI	GACNNNGTC	1 cut(s)	364
PflMI	CCANNNNNTGG	3 cut(s)	386, 755, 1080
PkrI	GCNGC	6 cut(s)	7, 10, 74, 1255, 1258, 1314
PleI	GAGTC	5 cut(s)	151, 334, 429, 889, 967
PpsI	GAGTC	5 cut(s)	151, 334, 429, 889, 967
PshBI	ATTAAT	1 cut(s)	675
Psp124BI	GAGCTC	2 cut(s)	1158, 1324
Psp6I	CCWGG	3 cut(s)	1087, 1132, 1269
PspEI	GGTNACC	1 cut(s)	1126
PspFI	CCCAGC	1 cut(s)	1176
PspGI	CCWGG	3 cut(s)	1087, 1132, 1269
PspN4I	GGNNCC	3 cut(s)	505, 574, 1275
PspOMI	GGGCCC	1 cut(s)	572
PspPI	GGNCC	8 cut(s)	50, 203, 572, 573, 704, 1031, 1770, 1918
PstI	CTGCAG	2 cut(s)	58, 276
PstNI	CAGNNNCTG	2 cut(s)	362, 1013
PsuI	RGATCY	4 cut(s)	35, 268, 494, 695
PsyI	GACNNNGTC	1 cut(s)	364
RsaI	GTAC	1 cut(s)	315
RsaNI	GTAC	1 cut(s)	314
RseI	CAYNNNNRTG	3 cut(s)	548, 1568, 1833
SacI	GAGCTC	2 cut(s)	1158, 1324
SalI	GTCGAC	1 cut(s)	367
SaqAI	TTAA	3 cut(s)	675, 903, 1707
SatI	GCNGC	6 cut(s)	6, 9, 73, 1254, 1257, 1313
Sau3AI	GATC	9 cut(s)	35, 78, 170, 268, 322, 494, 695, 1606, 1747
Sau96I	GGNCC	8 cut(s)	50, 203, 572, 573, 704, 1031, 1770, 1918
SchI	GAGTC	5 cut(s)	152, 334, 429, 890, 967
ScrFI	CCNGG	5 cut(s)	624, 828, 1089, 1134, 1271
SduI	GDGCHC	5 cut(s)	418, 576, 767, 1158, 1324
SexAI	ACCWGGT	1 cut(s)	1087
SfaNI	GCATC	6 cut(s)	159, 404, 603, 689, 1729, 1837
SfcI	CTRYAG	3 cut(s)	54, 272, 816
SinI	GGWCC	2 cut(s)	203, 704
SmiMI	CAYNNNNRTG	3 cut(s)	548, 1568, 1833
SmlI	CTYRAG	3 cut(s)	157, 351, 889
SmoI	CTYRAG	3 cut(s)	157, 351, 889
Sse9I	AATT	4 cut(s)	102, 942, 1095, 1580
SsiI	CCGC	2 cut(s)	6, 1896
SspI	AATATT	1 cut(s)	1281
SspMI	CTAG	4 cut(s)	491, 948, 1539, 1631
SstI	GAGCTC	2 cut(s)	1158, 1324
StyD4I	CCNGG	5 cut(s)	622, 826, 1087, 1132, 1269
StyI	CCWWGG	4 cut(s)	957, 1074, 1161, 1823
TaaI	ACNGT	2 cut(s)	16, 874
TaiI	ACGT	3 cut(s)	1408, 1456, 1531
TaqI	TCGA	2 cut(s)	368, 1861
TasI	AATT	4 cut(s)	102, 942, 1095, 1580
TatI	WGTACW	1 cut(s)	313
TauI	GCSGC	1 cut(s)	8
TfiI	GAWTC	9 cut(s)	59, 564, 728, 898, 1061, 1265, 1542, 1646, 1724
Tru1I	TTAA	3 cut(s)	675, 903, 1707
Tru9I	TTAA	3 cut(s)	675, 903, 1707
TscAI	CASTG	4 cut(s)	363, 538, 975, 1570
TseFI	GTSAC	4 cut(s)	257, 358, 1534, 1755
TseI	GCWGC	5 cut(s)	8, 72, 1253, 1256, 1312
Tsp45I	GTSAC	4 cut(s)	257, 358, 1534, 1755
TspDTI	ATGAA	8 cut(s)	30, 917, 1465, 1469, 1586, 1608, 1671, 1805
TspRI	CASTG	4 cut(s)	363, 538, 975, 1570
Tth111I	GACNNNGTC	1 cut(s)	364
Van91I	CCANNNNNTGG	3 cut(s)	386, 755, 1080
VpaK11BI	GGWCC	2 cut(s)	203, 704
VspI	ATTAAT	1 cut(s)	675
XagI	CCTNNNNNAGG	1 cut(s)	1026
XapI	RAATTY	2 cut(s)	102, 1580
XmiI	GTMKAC	1 cut(s)	368
XspI	CTAG	4 cut(s)	491, 948, 1539, 1631
Zsp2I	ATGCAT	1 cut(s)	682

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.