FDF
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G19360 AT4G19360 |
| fragaria_vesca | FvH4_6g45450 FvH4_6g45450 FvH4_6g45450 FvH4_6g45450 FvH4_6g45450 |
| rosa_chinensis | RchiOBHm_Chr2g0163281 |
| rosa_laevigata | RLG00000021388 |
| rosa_multiflora | Rmu_co8413003.1_g000001 Rmu_sc0002045.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00087410 |
| rosa_rugosa | Rorug02G0502000 |
| rosa_samantha | Rh2AG568800 Rh2BG580900 Rh2CG406800 Rh2CG550500 Rh2DG590800 |
| rosa_wichuraiana | Rw2G047060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1008 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1796 |
| Acc36I | ACCTGC | 2 cut(s) | 865, 1854 |
| AccB1I | GGYRCC | 1 cut(s) | 947 |
| AccI | GTMKAC | 1 cut(s) | 1370 |
| AccII | CGCG | 1 cut(s) | 534 |
| AccIII | TCCGGA | 1 cut(s) | 661 |
| AciI | CCGC | 9 cut(s) | 1161, 1358, 1509, 1545, 1655, 1685, 1697, 1892, 2338 |
| AclWI | GGATC | 4 cut(s) | 157, 1973, 2154, 2404 |
| AcoI | YGGCCR | 3 cut(s) | 419, 1082, 1893 |
| AcsI | RAATTY | 5 cut(s) | 403, 705, 1274, 2123, 2145 |
| AcuI | CTGAAG | 3 cut(s) | 27, 186, 1950 |
| AfaI | GTAC | 3 cut(s) | 411, 1068, 1224 |
| AhlI | ACTAGT | 1 cut(s) | 1373 |
| AjiI | CACGTC | 1 cut(s) | 1309 |
| AjnI | CCWGG | 6 cut(s) | 828, 865, 1184, 1754, 1802, 1915 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 740, 772 |
| Alw21I | GWGCWC | 6 cut(s) | 119, 1402, 1456, 1561, 1885, 2274 |
| Alw26I | GTCTC | 2 cut(s) | 2415, 2562 |
| Alw44I | GTGCAC | 1 cut(s) | 2270 |
| AlwI | GGATC | 4 cut(s) | 157, 1973, 2154, 2404 |
| Aor13HI | TCCGGA | 1 cut(s) | 661 |
| ApaLI | GTGCAC | 1 cut(s) | 2270 |
| ApoI | RAATTY | 5 cut(s) | 403, 705, 1274, 2123, 2145 |
| AspLEI | GCGC | 1 cut(s) | 1660 |
| AspS9I | GGNCC | 5 cut(s) | 154, 1517, 1694, 1715, 2290 |
| AsuC2I | CCSGG | 1 cut(s) | 2294 |
| AsuHPI | GGTGA | 3 cut(s) | 881, 1454, 1606 |
| AsuNHI | GCTAGC | 1 cut(s) | 1354 |
| AvaII | GGWCC | 2 cut(s) | 1517, 2290 |
| BaeGI | GKGCMC | 2 cut(s) | 950, 2274 |
| BalI | TGGCCA | 2 cut(s) | 421, 1084 |
| BanI | GGYRCC | 1 cut(s) | 947 |
| BanII | GRGCYC | 3 cut(s) | 1456, 1561, 1885 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1206, 1209, 1238, 1241 |
| BbsI | GAAGAC | 1 cut(s) | 106 |
| Bbv12I | GWGCWC | 6 cut(s) | 119, 1402, 1456, 1561, 1885, 2274 |
| BccI | CCATC | 5 cut(s) | 468, 737, 1093, 1147, 1511 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1634, 1668 |
| BciT130I | CCWGG | 6 cut(s) | 830, 867, 1186, 1756, 1804, 1917 |
| BciVI | GTATCC | 1 cut(s) | 793 |
| BcnI | CCSGG | 1 cut(s) | 2294 |
| BcoDI | GTCTC | 2 cut(s) | 2415, 2562 |
| BcuI | ACTAGT | 1 cut(s) | 1373 |
| BfaI | CTAG | 5 cut(s) | 428, 957, 1355, 1374, 2367 |
| BfmI | CTRYAG | 5 cut(s) | 209, 354, 1050, 1226, 1847 |
| BfuAI | ACCTGC | 2 cut(s) | 865, 1854 |
| BfuI | GTATCC | 1 cut(s) | 793 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 152, 1693 |
| BmcAI | AGTACT | 1 cut(s) | 1224 |
| Bme1390I | CCNGG | 7 cut(s) | 830, 867, 1186, 1756, 1804, 1917, 2294 |
| Bme18I | GGWCC | 2 cut(s) | 1517, 2290 |
| BmgBI | CACGTC | 1 cut(s) | 1309 |
| BmgT120I | GGNCC | 5 cut(s) | 154, 1517, 1694, 1715, 2290 |
| BmiI | GGNNCC | 5 cut(s) | 762, 949, 1519, 1590, 1857 |
| BmrFI | CCNGG | 7 cut(s) | 830, 867, 1186, 1756, 1804, 1917, 2294 |
| BmrI | ACTGGG | 2 cut(s) | 36, 1701 |
| BmsI | GCATC | 5 cut(s) | 569, 1175, 2125, 2164, 2337 |
| BmtI | GCTAGC | 1 cut(s) | 1358 |
| BmuI | ACTGGG | 2 cut(s) | 36, 1701 |
| BpiI | GAAGAC | 1 cut(s) | 106 |
| BpmI | CTGGAG | 2 cut(s) | 1754, 2115 |
| Bpu10I | CCTNAGC | 1 cut(s) | 629 |
| BpuMI | CCSGG | 1 cut(s) | 2294 |
| Bsa29I | ATCGAT | 1 cut(s) | 547 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1977 |
| BsaJI | CCNNGG | 9 cut(s) | 167, 189, 500, 756, 764, 828, 829, 1754, 1916 |
| BsaWI | WCCGGW | 3 cut(s) | 661, 1514, 1981 |
| Bse118I | RCCGGY | 1 cut(s) | 1591 |
| Bse1I | ACTGG | 6 cut(s) | 42, 422, 1081, 1696, 1737, 1912 |
| Bse3DI | GCAATG | 1 cut(s) | 1578 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1977 |
| BseAI | TCCGGA | 1 cut(s) | 661 |
| BseBI | CCWGG | 6 cut(s) | 830, 867, 1186, 1756, 1804, 1917 |
| BseCI | ATCGAT | 1 cut(s) | 547 |
| BseDI | CCNNGG | 9 cut(s) | 167, 189, 500, 756, 764, 828, 829, 1754, 1916 |
| BseGI | GGATG | 3 cut(s) | 36, 748, 824 |
| BseJI | GATNNNNATC | 1 cut(s) | 1977 |
| BseMI | GCAATG | 1 cut(s) | 1578 |
| BseMII | CTCAG | 7 cut(s) | 257, 375, 1019, 1403, 1415, 1439, 1900 |
| BseNI | ACTGG | 6 cut(s) | 42, 422, 1081, 1696, 1737, 1912 |
| BseRI | GAGGAG | 4 cut(s) | 1693, 1784, 1848, 1971 |
| BseSI | GKGCMC | 2 cut(s) | 950, 2274 |
| BsgI | GTGCAG | 1 cut(s) | 2190 |
| Bsh1236I | CGCG | 1 cut(s) | 534 |
| BshNI | GGYRCC | 1 cut(s) | 947 |
| BshVI | ATCGAT | 1 cut(s) | 547 |
| BsiHKAI | GWGCWC | 6 cut(s) | 119, 1402, 1456, 1561, 1885, 2274 |
| BsiSI | CCGG | 5 cut(s) | 662, 1515, 1592, 1982, 2293 |
| BslFI | GGGAC | 1 cut(s) | 920 |
| BsmAI | GTCTC | 2 cut(s) | 2415, 2562 |
| BsmFI | GGGAC | 1 cut(s) | 920 |
| BsmI | GAATGC | 2 cut(s) | 255, 1828 |
| Bsp1286I | GDGCHC | 7 cut(s) | 119, 950, 1402, 1456, 1561, 1885, 2274 |
| Bsp13I | TCCGGA | 1 cut(s) | 661 |
| Bsp143I | GATC | 9 cut(s) | 162, 544, 619, 1461, 1671, 1773, 1978, 2159, 2409 |
| Bsp68I | TCGCGA | 1 cut(s) | 534 |
| BspACI | CCGC | 9 cut(s) | 1161, 1358, 1509, 1545, 1655, 1685, 1697, 1892, 2338 |
| BspCNI | CTCAG | 7 cut(s) | 256, 374, 1020, 1404, 1416, 1440, 1899 |
| BspDI | ATCGAT | 1 cut(s) | 547 |
| BspEI | TCCGGA | 1 cut(s) | 661 |
| BspFNI | CGCG | 1 cut(s) | 534 |
| BspLI | GGNNCC | 5 cut(s) | 762, 949, 1519, 1590, 1857 |
| BspMAI | CTGCAG | 3 cut(s) | 213, 358, 1851 |
| BspMI | ACCTGC | 2 cut(s) | 865, 1854 |
| BspOI | GCTAGC | 1 cut(s) | 1358 |
| BspPI | GGATC | 4 cut(s) | 157, 1973, 2154, 2404 |
| BspQI | GCTCTTC | 1 cut(s) | 531 |
| BspT107I | GGYRCC | 1 cut(s) | 947 |
| BsrDI | GCAATG | 1 cut(s) | 1578 |
| BsrFI | RCCGGY | 1 cut(s) | 1591 |
| BsrI | ACTGG | 6 cut(s) | 42, 422, 1081, 1696, 1737, 1912 |
| BssAI | RCCGGY | 1 cut(s) | 1591 |
| BssECI | CCNNGG | 9 cut(s) | 167, 189, 500, 756, 764, 828, 829, 1754, 1916 |
| BssMI | GATC | 9 cut(s) | 162, 544, 619, 1461, 1671, 1773, 1978, 2159, 2409 |
| BssT1I | CCWWGG | 5 cut(s) | 167, 189, 500, 756, 764 |
| Bst2UI | CCWGG | 6 cut(s) | 830, 867, 1186, 1756, 1804, 1917 |
| Bst4CI | ACNGT | 1 cut(s) | 1230 |
| Bst6I | CTCTTC | 4 cut(s) | 531, 660, 1143, 1539 |
| BstC8I | GCNNGC | 2 cut(s) | 1082, 1356 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 499, 1850, 2264 |
| BstF5I | GGATG | 3 cut(s) | 36, 748, 824 |
| BstFNI | CGCG | 1 cut(s) | 534 |
| BstHHI | GCGC | 1 cut(s) | 1660 |
| BstKTI | GATC | 9 cut(s) | 165, 547, 622, 1464, 1674, 1776, 1981, 2162, 2412 |
| BstMAI | GTCTC | 2 cut(s) | 2415, 2562 |
| BstMBI | GATC | 9 cut(s) | 162, 544, 619, 1461, 1671, 1773, 1978, 2159, 2409 |
| BstNI | CCWGG | 6 cut(s) | 830, 867, 1186, 1756, 1804, 1917 |
| BstSCI | CCNGG | 7 cut(s) | 828, 865, 1184, 1754, 1802, 1915, 2292 |
| BstSFI | CTRYAG | 5 cut(s) | 209, 354, 1050, 1226, 1847 |
| BstSLI | GKGCMC | 2 cut(s) | 950, 2274 |
| BstUI | CGCG | 1 cut(s) | 534 |
| BstV2I | GAAGAC | 1 cut(s) | 106 |
| BstX2I | RGATCY | 2 cut(s) | 162, 2159 |
| BstYI | RGATCY | 2 cut(s) | 162, 2159 |
| Bsu15I | ATCGAT | 1 cut(s) | 547 |
| BsuI | GTATCC | 1 cut(s) | 793 |
| BsuTUI | ATCGAT | 1 cut(s) | 547 |
| BtrI | CACGTC | 1 cut(s) | 1309 |
| BtsCI | GGATG | 3 cut(s) | 36, 748, 824 |
| BtsI | GCAGTG | 1 cut(s) | 351 |
| BtsIMutI | CAGTG | 3 cut(s) | 119, 351, 2108 |
| BtuMI | TCGCGA | 1 cut(s) | 534 |
| BveI | ACCTGC | 2 cut(s) | 865, 1854 |
| Cac8I | GCNNGC | 2 cut(s) | 1082, 1356 |
| CfoI | GCGC | 1 cut(s) | 1660 |
| Cfr10I | RCCGGY | 1 cut(s) | 1591 |
| Cfr13I | GGNCC | 5 cut(s) | 154, 1517, 1694, 1715, 2290 |
| ClaI | ATCGAT | 1 cut(s) | 547 |
| Csp6I | GTAC | 3 cut(s) | 410, 1067, 1223 |
| CviAII | CATG | 2 cut(s) | 2074, 2224 |
| CviQI | GTAC | 3 cut(s) | 410, 1067, 1223 |
| DpnI | GATC | 9 cut(s) | 164, 546, 621, 1463, 1673, 1775, 1980, 2161, 2411 |
| DpnII | GATC | 9 cut(s) | 162, 544, 619, 1461, 1671, 1773, 1978, 2159, 2409 |
| DraI | TTTAAA | 1 cut(s) | 1489 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1796 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1796 |
| EaeI | YGGCCR | 3 cut(s) | 419, 1082, 1893 |
| Eam1104I | CTCTTC | 4 cut(s) | 531, 660, 1143, 1539 |
| EarI | CTCTTC | 4 cut(s) | 531, 660, 1143, 1539 |
| EciI | GGCGGA | 2 cut(s) | 1498, 1534 |
| Ecl136II | GAGCTC | 3 cut(s) | 1454, 1559, 1883 |
| Eco130I | CCWWGG | 5 cut(s) | 167, 189, 500, 756, 764 |
| Eco147I | AGGCCT | 2 cut(s) | 234, 285 |
| Eco24I | GRGCYC | 3 cut(s) | 1456, 1561, 1885 |
| Eco32I | GATATC | 2 cut(s) | 1202, 2215 |
| Eco47I | GGWCC | 2 cut(s) | 1517, 2290 |
| Eco53kI | GAGCTC | 3 cut(s) | 1454, 1559, 1883 |
| Eco57I | CTGAAG | 3 cut(s) | 27, 186, 1950 |
| EcoICRI | GAGCTC | 3 cut(s) | 1454, 1559, 1883 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 499, 1850, 2264 |
| EcoRI | GAATTC | 1 cut(s) | 705 |
| EcoRII | CCWGG | 6 cut(s) | 828, 865, 1184, 1754, 1802, 1915 |
| EcoRV | GATATC | 2 cut(s) | 1202, 2215 |
| EcoT14I | CCWWGG | 5 cut(s) | 167, 189, 500, 756, 764 |
| EcoT38I | GRGCYC | 3 cut(s) | 1456, 1561, 1885 |
| ErhI | CCWWGG | 5 cut(s) | 167, 189, 500, 756, 764 |
| FaeI | CATG | 2 cut(s) | 2077, 2227 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 493, 525, 740, 772 |
| FaqI | GGGAC | 1 cut(s) | 920 |
| FatI | CATG | 2 cut(s) | 2073, 2223 |
| FauNDI | CATATG | 2 cut(s) | 925, 1778 |
| FblI | GTMKAC | 1 cut(s) | 1370 |
| FokI | GGATG | 3 cut(s) | 23, 755, 811 |
| FriOI | GRGCYC | 3 cut(s) | 1456, 1561, 1885 |
| FspBI | CTAG | 5 cut(s) | 428, 957, 1355, 1374, 2367 |
| GlaI | GCGC | 1 cut(s) | 1659 |
| GsuI | CTGGAG | 2 cut(s) | 1754, 2115 |
| HapII | CCGG | 5 cut(s) | 662, 1515, 1592, 1982, 2293 |
| HhaI | GCGC | 1 cut(s) | 1660 |
| Hin1II | CATG | 2 cut(s) | 2077, 2227 |
| Hin6I | GCGC | 1 cut(s) | 1658 |
| HinP1I | GCGC | 1 cut(s) | 1658 |
| HindIII | AAGCTT | 4 cut(s) | 1941, 1998, 2243, 2381 |
| HpaII | CCGG | 5 cut(s) | 662, 1515, 1592, 1982, 2293 |
| HphI | GGTGA | 3 cut(s) | 881, 1454, 1606 |
| Hpy166II | GTNNAC | 4 cut(s) | 1363, 1371, 1445, 2272 |
| Hpy8I | GTNNAC | 4 cut(s) | 1363, 1371, 1445, 2272 |
| HpyCH4III | ACNGT | 1 cut(s) | 1230 |
| HpyCH4IV | ACGT | 2 cut(s) | 803, 1308 |
| HpySE526I | ACGT | 2 cut(s) | 803, 1308 |
| Hsp92II | CATG | 2 cut(s) | 2077, 2227 |
| HspAI | GCGC | 1 cut(s) | 1658 |
| Kpn2I | TCCGGA | 1 cut(s) | 661 |
| Kzo9I | GATC | 9 cut(s) | 162, 544, 619, 1461, 1671, 1773, 1978, 2159, 2409 |
| LguI | GCTCTTC | 1 cut(s) | 531 |
| LmnI | GCTCC | 6 cut(s) | 1090, 1505, 1588, 1861, 1880, 2015 |
| LweI | GCATC | 5 cut(s) | 569, 1175, 2125, 2164, 2337 |
| MaeI | CTAG | 5 cut(s) | 428, 957, 1355, 1374, 2367 |
| MaeII | ACGT | 2 cut(s) | 803, 1308 |
| MaeIII | GTNAC | 7 cut(s) | 78, 176, 455, 592, 1309, 2219, 2531 |
| MalI | GATC | 9 cut(s) | 164, 546, 621, 1463, 1673, 1775, 1980, 2161, 2411 |
| MboI | GATC | 9 cut(s) | 162, 544, 619, 1461, 1671, 1773, 1978, 2159, 2409 |
| MfeI | CAATTG | 2 cut(s) | 582, 2517 |
| MflI | RGATCY | 2 cut(s) | 162, 2159 |
| MhlI | GDGCHC | 7 cut(s) | 119, 950, 1402, 1456, 1561, 1885, 2274 |
| MlsI | TGGCCA | 2 cut(s) | 421, 1084 |
| MluNI | TGGCCA | 2 cut(s) | 421, 1084 |
| MlyI | GAGTC | 3 cut(s) | 353, 523, 2522 |
| MmeI | TCCRAC | 4 cut(s) | 586, 999, 1858, 2488 |
| Mox20I | TGGCCA | 2 cut(s) | 421, 1084 |
| MroI | TCCGGA | 1 cut(s) | 661 |
| MscI | TGGCCA | 2 cut(s) | 421, 1084 |
| MseI | TTAA | 5 cut(s) | 1196, 1488, 2229, 2247, 2454 |
| MslI | CAYNNNNRTG | 3 cut(s) | 789, 2429, 2576 |
| Msp20I | TGGCCA | 2 cut(s) | 421, 1084 |
| MspI | CCGG | 5 cut(s) | 662, 1515, 1592, 1982, 2293 |
| MspR9I | CCNGG | 7 cut(s) | 830, 867, 1186, 1756, 1804, 1917, 2294 |
| MunI | CAATTG | 2 cut(s) | 582, 2517 |
| Mva1269I | GAATGC | 2 cut(s) | 255, 1828 |
| MvaI | CCWGG | 6 cut(s) | 830, 867, 1186, 1756, 1804, 1917 |
| MvnI | CGCG | 1 cut(s) | 534 |
| NciI | CCSGG | 1 cut(s) | 2294 |
| NdeI | CATATG | 2 cut(s) | 925, 1778 |
| NdeII | GATC | 9 cut(s) | 162, 544, 619, 1461, 1671, 1773, 1978, 2159, 2409 |
| NheI | GCTAGC | 1 cut(s) | 1354 |
| NlaIII | CATG | 2 cut(s) | 2077, 2227 |
| NlaIV | GGNNCC | 5 cut(s) | 762, 949, 1519, 1590, 1857 |
| NmuCI | GTSAC | 4 cut(s) | 78, 176, 1309, 2531 |
| NruI | TCGCGA | 1 cut(s) | 534 |
| PasI | CCCWGGG | 1 cut(s) | 829 |
| PceI | AGGCCT | 2 cut(s) | 234, 285 |
| PciSI | GCTCTTC | 1 cut(s) | 531 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 724 |
| PctI | GAATGC | 2 cut(s) | 255, 1828 |
| PfeI | GAWTC | 9 cut(s) | 18, 185, 227, 781, 962, 1386, 1583, 2304, 2441 |
| PleI | GAGTC | 3 cut(s) | 353, 523, 2521 |
| PpsI | GAGTC | 3 cut(s) | 353, 523, 2521 |
| PsiI | TTATAA | 1 cut(s) | 1008 |
| Psp124BI | GAGCTC | 3 cut(s) | 1456, 1561, 1885 |
| Psp6I | CCWGG | 6 cut(s) | 828, 865, 1184, 1754, 1802, 1915 |
| PspGI | CCWGG | 6 cut(s) | 828, 865, 1184, 1754, 1802, 1915 |
| PspN4I | GGNNCC | 5 cut(s) | 762, 949, 1519, 1590, 1857 |
| PspPI | GGNCC | 5 cut(s) | 154, 1517, 1694, 1715, 2290 |
| PstI | CTGCAG | 3 cut(s) | 213, 358, 1851 |
| PsuI | RGATCY | 2 cut(s) | 162, 2159 |
| RruI | TCGCGA | 1 cut(s) | 534 |
| RsaI | GTAC | 3 cut(s) | 411, 1068, 1224 |
| RsaNI | GTAC | 3 cut(s) | 410, 1067, 1223 |
| RseI | CAYNNNNRTG | 3 cut(s) | 789, 2429, 2576 |
| SacI | GAGCTC | 3 cut(s) | 1456, 1561, 1885 |
| SapI | GCTCTTC | 1 cut(s) | 531 |
| SaqAI | TTAA | 5 cut(s) | 1196, 1488, 2229, 2247, 2454 |
| Sau3AI | GATC | 9 cut(s) | 162, 544, 619, 1461, 1671, 1773, 1978, 2159, 2409 |
| Sau96I | GGNCC | 5 cut(s) | 154, 1517, 1694, 1715, 2290 |
| ScaI | AGTACT | 1 cut(s) | 1224 |
| SchI | GAGTC | 3 cut(s) | 353, 523, 2522 |
| ScrFI | CCNGG | 7 cut(s) | 830, 867, 1186, 1756, 1804, 1917, 2294 |
| SduI | GDGCHC | 7 cut(s) | 119, 950, 1402, 1456, 1561, 1885, 2274 |
| SfaNI | GCATC | 5 cut(s) | 569, 1175, 2125, 2164, 2337 |
| SfcI | CTRYAG | 5 cut(s) | 209, 354, 1050, 1226, 1847 |
| SinI | GGWCC | 2 cut(s) | 1517, 2290 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 789, 2429, 2576 |
| SpeI | ACTAGT | 1 cut(s) | 1373 |
| SseBI | AGGCCT | 2 cut(s) | 234, 285 |
| SsiI | CCGC | 9 cut(s) | 1161, 1358, 1509, 1545, 1655, 1685, 1697, 1892, 2338 |
| SspMI | CTAG | 5 cut(s) | 428, 957, 1355, 1374, 2367 |
| SstI | GAGCTC | 3 cut(s) | 1456, 1561, 1885 |
| StuI | AGGCCT | 2 cut(s) | 234, 285 |
| StyD4I | CCNGG | 7 cut(s) | 828, 865, 1184, 1754, 1802, 1915, 2292 |
| StyI | CCWWGG | 5 cut(s) | 167, 189, 500, 756, 764 |
| TaaI | ACNGT | 1 cut(s) | 1230 |
| TaiI | ACGT | 2 cut(s) | 806, 1311 |
| TaqI | TCGA | 8 cut(s) | 470, 547, 727, 1169, 1555, 1729, 2307, 2355 |
| TatI | WGTACW | 1 cut(s) | 1222 |
| TauI | GCSGC | 5 cut(s) | 1163, 1658, 1687, 1699, 1895 |
| TfiI | GAWTC | 9 cut(s) | 18, 185, 227, 781, 962, 1386, 1583, 2304, 2441 |
| Tru1I | TTAA | 5 cut(s) | 1196, 1488, 2229, 2247, 2454 |
| Tru9I | TTAA | 5 cut(s) | 1196, 1488, 2229, 2247, 2454 |
| TscAI | CASTG | 3 cut(s) | 119, 358, 2108 |
| TseFI | GTSAC | 4 cut(s) | 78, 176, 1309, 2531 |
| Tsp45I | GTSAC | 4 cut(s) | 78, 176, 1309, 2531 |
| TspDTI | ATGAA | 8 cut(s) | 25, 337, 1148, 1222, 1914, 2019, 2058, 2082 |
| TspGWI | ACGGA | 5 cut(s) | 239, 955, 1385, 2402, 2566 |
| TspRI | CASTG | 3 cut(s) | 119, 358, 2108 |
| VneI | GTGCAC | 1 cut(s) | 2270 |
| VpaK11BI | GGWCC | 2 cut(s) | 1517, 2290 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 499, 1850, 2264 |
| XapI | RAATTY | 5 cut(s) | 403, 705, 1274, 2123, 2145 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 148, 1762 |
| XmiI | GTMKAC | 1 cut(s) | 1370 |
| XspI | CTAG | 5 cut(s) | 428, 957, 1355, 1374, 2367 |
| ZrmI | AGTACT | 1 cut(s) | 1224 |