Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0015244

Physical Location & Seq

Genomic Coordinates Reverse (-)

79333570 .. 79337760

Gene Structure 4191 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021925

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3354 bp

ATGGCCGATCACCACCACCACCACCACCGCCCCCACCGCCTCTCCCTCCCTCAACGCCCCACCACCCCCACAACCTTCGCCTCCACCACCCCCACAACCTCCCGCCAATACCCACTTTACCCCTTCACTCCCTCCACCGCCACTCCCAAACACCGCCTCTCTTCTCTCAACCCCAAACCCCTCTCCGCCGCCGCCGCCGCCGGAAGCAAATCCTCTCTCTCATTCCTCTTCCTCCTCCTCCTCTCCCTCCGATCACTCTACTCCCTCCTCCCCTTCCTCCGCTCCTCCCCTTCCTTCTCTCTCTTCCCCTTCTCCTTCCTCGTCTCCCTCCTCTCCTTCCTCCTAACCCTATCTTTCTCTTTCTTCACCTCCTCCGCCGCGTCCAAAGACCCGTTTCACCAGAAGCCCAACCAGCCCATCTTCTCCCTCACTCTCATCACTCAATCCCAGCACAGACTCCTCGTCGCGAAATCGATTCTTCTCGCCGGAGTCTTCCTCCTCCGCTTCCAAGCCCTCCGGTACTGCGGCACCGCCGCCATGATCCTAGCCGAGATGTCTGGAAATGTGGCGGCGAGGTTCGTGGCAGAGGGGAGGAAACAGAGTGTGGTGGGCGGCGGTGGTGATCGGAATCGGAGCTCCAAGAAAATGGGAGTGTCTGTGTTGCCTAGGGTGGACTGTGTGAGAATTTGGCCAATGCTGCTTCCGTTTCTGTCTGGATTTTTGGGGTGTTATGAGAGGGTTTCTATGAATTGGGGGACTATTAGGCAGTTGGGGAGGAAGAGGGTTCGGGTGATTTCGTTGTTTTTTACTACTGTTGTGCTGTTCATTCCTGCTGTTGTTAGTGTTTTCATGTTTGAAGCTGAGGGAGATGGAGTTGTTTCCATTGGGAACTTGGGCTGGCCTCTGGCAAACACTGTTGTTTTCGGTGTGCTTCTGAGTGAGAGTTATAGTGATGAGAAGCTAATGAGTTCTAAAGATTTTCGGAGGGAGTATTTGGTGACTTTCTTATGTACTGTTGTATTGGAGTTGTTCTATTTTGCTGAATTGTCACTTTGGGGGCTATTGCTTTGTGGTATGTTGCTGTACGTTGCTGTTAGGGAGTTGGATCCTTTTCATGCGAGTTATGTTGAACTGGGAATGGAGTCGTCGGAATCATTTAGTGCATCCGTTATGAAACCTATTAGGCACATTTTGAGTGAGAGGAAATCGCGGAAGATTGCACTTTTCCTTCTGATCAATACTGCATACATGTTTGTGGAATTCATTGCTGGGTTCATGAGCAATAGTCTAGGGCTGATATCAGATGCCTGTCACATGTTGTTTGATTGTGCTGCTCTGGCAATTGGGCTATATGCTTCGTATATTTCGCGCTTGCCTGCAAATAATCAGTTTAACTATGGCCGTGGGAGATTTGAGGTTCTTGCAGGATATACAAATGCTGTTTTCCTGGTTTTGGTTGGAGCATTAATAGTATTGGAATCACTTGAGAGGATTTTGGACCCTCAGGAGATGTCAACTAGCAGTATACTAGTTGTTTCAATTGGAGGGCTTCTTGTCAATGTGGTTGGTTTAATCTTCTTTCATGAGGAGCATCATCATGCCCATGGTGGATCCGGTTCATGCTCTCACTCCCACAGTCATCAACATTCACATGGCTCTGTTGGACATAATCATGCAGGTCATGAAAAGCTTGAGGAATCGTGTATAGCTATTTCTCATGAATGCCATGAAGAATCGTGTGCCAGCCATGATGACCATCACCAACATGGCAGTTCTGTTGGCTGCAAAGATCACCGGCACGATCACCATGATCACAGCCACCACCATGACCACCATGACCACAGCCACCAGCATGATCACCATGACCACAGCCACCAGCATGACCACCATGATCACAGCCATCATCATGACCACCATGATCACAGCCATCATCATGACCACCATGGCCACAGTCACCAGCATGACAACCATGGCCACAACCACCAGCATGATCACCATGGCCACAACCACCAGCATGGTGGTTCCGAGCTGAAAAGACTGCCAACCGGTGGAGAAAAATCAACTAAGCAACAGCATCGCCACATTGACCACAACATGGAAGGAATATTTCTGCATGTTTTGGCTGACACCTTAGGGAGTGTCGGAGTTGTTATATCAACACTCTTAATTAAGTACAAGGGATGGCTTGTTGCTGATCCTGCATGCTCGATATTTATTTCTGTCTTGATTATATCTTCAGTTATCCCATTGCTCAGGAACTCTGCAGAAGTCTTGCTCCAAAGAATTCCGAGGGCACATGAGCAGGATTTGAGAAAAGCTCTTAATGATGTTAGGAAGATAAGGGGGGTTTCTGGTATTCGGAACTTGCATGTATGGAGTTTCACAAACTCAGATGTAGTGGGTACGCTCCATCTTCATGTTTCCACAGAAGTTGACAAAGGATCTGCAAAAGCTCAGGTCCCTTTTGTGGTTGATCCTCAAGTCATTTTGGTTTTTACTCTCCTCTCTTATGCAACTGCTTCTCATCCCCACAACAAAAGCTCTTCCCCATTTGAATTCCTTGAACATCTCAAGGGTTGCCACAAAGGTGATAAGGTCAAAGGCATCAATGATCTCAAAAAATACCTAGAAAAGTACGGTTACTTGAACTACAAGAACCACAGTCATTCGGACGACGATGATTTTGATGACCTTTTGGAGGAAGCCATCAAGACTTACCAGGTCAATTACCACCTCAAGTCCACCGGAACACTGGACAGCAAAACAGTGTCGAAGATGATGACACCTCGTTGTGGCGTGCCGGATATCATCAATGGCACCTCGTCCATATATGAGATCAGCCAAGAAGAGGCACCACCATGTACTCGGTATTGTTTTACAGGTTCAATTCATACCACTACACACTACTCATTTTTCCAGGGAAATCCAAAATGGCCTTCTTCTAAATACCATCTCACTTACGGTTTTCTCCCCAACACCCCATCCGAAGCCACGGGCGCTATCGCACGGGCTTTCGCAACATGGGCTGGAAACACTCACTTCACGTTCAGCCATTTTCATAAGGGTGATCATGGAGACGGGAATTCATTTGATGGCCCGGGCGGGGTCCTAGCCCATGCTTTTAGCCCGTCGGATGGAAGATTCCACTACGACGCAGATGAGCCTTGGTCTGTGGGTGCTACACCAGGTGCTTATGACTTGGAGACTGTGACTTTGGATGAAATAGGGCACTTTCTAGGACTTGGACATAGCTCAGTAGAAGGAGCTATCATGGCCCCAGCTATTCCTCCAGGAGTGACTAAAAGTTTGCATGGGGACGATGTTCAAGGAATCAAGGCTTTATACAACGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005385 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006810 GO:0006811 GO:0006812 GO:0006829 GO:0008150 GO:0008324 GO:0010035 GO:0010038 GO:0010043 GO:0012505 GO:0015075 GO:0015318 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0032879 GO:0034220 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0046915 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061088 GO:0065007 GO:0065008 GO:0070838 GO:0071577 GO:0071578 GO:0072509 GO:0072511 GO:0098655 GO:0098657 GO:0098659 GO:0098660 GO:0098662 GO:0098739 GO:0099587

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_efflux

Protein Analysis

1118

Amino Acids

124.04

Weight (kDa)

6.81

Isoelectric Point (pI)

35.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_efflux	PF01545	407 - 539	2e-32	Cation efflux transmembrane domain
Cation_efflux	PF01545	689 - 759	2.1e-13	Cation efflux transmembrane domain
PG_binding_1	PF01471	869 - 926	8.2e-10	Putative peptidoglycan binding domain
Peptidase_M10	PF00413	977 - 1115	1.1e-33	Matrixin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015244)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04620 AT2G04620
fragaria_vesca	FvH4_6g49950
malus_domestica	MD17G1042100.v1.1
prunus_persica	Prupe.3G277100_v2.0.a1
pyrus_communis	pycom17g03760
rosa_chinensis	RchiOBHm_Chr2g0170121
rosa_laevigata	RLG00000021925
rosa_multiflora	Rmu_sc0013078.1_g000005
rosa_roxburghii	Rroxscaffold_2G00081570
rosa_rugosa	Rorug02G0545900.1
rosa_samantha	Rh2AG618000 Rh2BG629500 Rh2CG598900 Rh2DG641300
rosa_wichuraiana	Rw2G051170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1667
AccB1I	GGYRCC	3 cut(s)	527, 2816, 2851
AccB7I	CCANNNNNTGG	2 cut(s)	2048, 2095
AccBSI	CCGCTC	1 cut(s)	282
AccI	GTMKAC	1 cut(s)	1525
AccII	CGCG	4 cut(s)	380, 467, 1210, 1369
AclWI	GGATC	8 cut(s)	535, 1100, 1113, 1605, 1618, 2189, 2449, 2468
AcoI	YGGCCR	6 cut(s)	3, 689, 1399, 1945, 1972, 1999
AcsI	RAATTY	5 cut(s)	684, 1259, 2283, 2555, 3082
AcuI	CTGAAG	1 cut(s)	2220
AdeI	CACNNNGTG	1 cut(s)	3188
AfaI	GTAC	7 cut(s)	521, 1012, 1085, 2174, 2404, 2636, 2863
AfiI	CCNNNNNNNGG	9 cut(s)	1453, 2048, 2095, 2467, 2698, 2792, 2848, 3103, 3134
AflIII	ACRYGT	2 cut(s)	1248, 1314
AgeI	ACCGGT	1 cut(s)	2045
AgsI	TTSAA	8 cut(s)	857, 1130, 1539, 2555, 2564, 2647, 2886, 3326
AhdI	GACNNNNNGTC	1 cut(s)	461
AhlI	ACTAGT	1 cut(s)	1528
AjnI	CCWGG	5 cut(s)	1446, 2718, 2916, 3184, 3289
AjuI	GAANNNNNNNTTGG	2 cut(s)	2920, 2952
AleI	CACNNNNGTG	1 cut(s)	2586
Alw21I	GWGCWC	1 cut(s)	638
Alw26I	GTCTC	3 cut(s)	328, 3069, 3197
AlwI	GGATC	8 cut(s)	535, 1100, 1113, 1605, 1618, 2189, 2449, 2468
Ama87I	CYCGRG	1 cut(s)	3097
ApeKI	GCWGC	3 cut(s)	697, 1331, 1782
ApoI	RAATTY	5 cut(s)	684, 1259, 2283, 2555, 3082
ArsI	GACNNNNNNTTYG	6 cut(s)	2666, 2698, 3196, 3228, 3289, 3321
AseI	ATTAAT	1 cut(s)	1466
AsiGI	ACCGGT	1 cut(s)	2045
AspA2I	CCTAGG	1 cut(s)	665
AspLEI	GCGC	2 cut(s)	1371, 2999
AspS9I	GGNCC	5 cut(s)	1498, 2458, 3095, 3106, 3274
AsuC2I	CCSGG	2 cut(s)	3098, 3099
AvaI	CYCGRG	1 cut(s)	3097
AvaII	GGWCC	3 cut(s)	1498, 2458, 3106
AvrII	CCTAGG	1 cut(s)	665
AxyI	CCTNAGG	2 cut(s)	1503, 2131
BaeGI	GKGCMC	2 cut(s)	2296, 3231
BalI	TGGCCA	4 cut(s)	691, 1947, 1974, 2001
BamHI	GGATCC	2 cut(s)	1105, 1610
BanI	GGYRCC	3 cut(s)	527, 2816, 2851
BanII	GRGCYC	1 cut(s)	638
BbsI	GAAGAC	1 cut(s)	484
Bbv12I	GWGCWC	1 cut(s)	638
BbvCI	CCTCAGC	1 cut(s)	861
BbvI	GCAGC	3 cut(s)	684, 1318, 1769
BceAI	ACGGC	1 cut(s)	1386
BcgI	CGANNNNNNTGC	2 cut(s)	2057, 2091
BciT130I	CCWGG	5 cut(s)	1448, 2720, 2918, 3186, 3291
BclI	TGATCA	7 cut(s)	1233, 1810, 1855, 1891, 1918, 1990, 3067
BcnI	CCSGG	2 cut(s)	3098, 3099
BcoDI	GTCTC	3 cut(s)	328, 3069, 3197
BcuI	ACTAGT	1 cut(s)	1528
BfaI	CTAG	8 cut(s)	545, 666, 1289, 1518, 1529, 2627, 3110, 3236
BfmI	CTRYAG	1 cut(s)	2262
BfoI	RGCGCY	1 cut(s)	3000
BfuAI	ACCTGC	1 cut(s)	1667
BlnI	CCTAGG	1 cut(s)	665
Bme1390I	CCNGG	7 cut(s)	1448, 2720, 2918, 3098, 3099, 3186, 3291
Bme18I	GGWCC	3 cut(s)	1498, 2458, 3106
BmeRI	GACNNNNNGTC	1 cut(s)	461
BmeT110I	CYCGRG	1 cut(s)	3097
BmgT120I	GGNCC	5 cut(s)	1498, 2458, 3095, 3106, 3274
BmrFI	CCNGG	7 cut(s)	1448, 2720, 2918, 3098, 3099, 3186, 3291
BmrI	ACTGGG	1 cut(s)	1142
BmsI	GCATC	5 cut(s)	1172, 1294, 1600, 2083, 2613
BmuI	ACTGGG	1 cut(s)	1142
BpiI	GAAGAC	1 cut(s)	484
BplI	GAGNNNNNCTC	4 cut(s)	480, 512, 2302, 2334
BpmI	CTGGAG	1 cut(s)	3273
Bpu10I	CCTNAGC	3 cut(s)	861, 2252, 2454
BpuEI	CTTGAG	5 cut(s)	1505, 1712, 2463, 2555, 2720
BpuMI	CCSGG	2 cut(s)	3098, 3099
Bsa29I	ATCGAT	1 cut(s)	473
BsaBI	GATNNNNATC	2 cut(s)	627, 1755
BsaWI	WCCGGW	4 cut(s)	516, 1613, 2045, 2744
BsaXI	ACNNNNNCTCC	8 cut(s)	26, 56, 127, 157, 642, 672, 858, 888
Bsc4I	CCNNNNNNNGG	9 cut(s)	1453, 2048, 2095, 2467, 2698, 2792, 2848, 3103, 3134
Bse118I	RCCGGY	2 cut(s)	1794, 2045
Bse1I	ACTGG	2 cut(s)	1137, 2757
Bse21I	CCTNAGG	2 cut(s)	1503, 2131
Bse3DI	GCAATG	2 cut(s)	1263, 2246
Bse8I	GATNNNNATC	2 cut(s)	627, 1755
BseBI	CCWGG	5 cut(s)	1448, 2720, 2918, 3186, 3291
BseCI	ATCGAT	1 cut(s)	473
BseGI	GGATG	6 cut(s)	1163, 2186, 2524, 2981, 3139, 3223
BseJI	GATNNNNATC	2 cut(s)	627, 1755
BseLI	CCNNNNNNNGG	9 cut(s)	1453, 2048, 2095, 2467, 2698, 2792, 2848, 3103, 3134
BseMI	GCAATG	2 cut(s)	1263, 2246
BseMII	CTCAG	7 cut(s)	852, 926, 1517, 2266, 2403, 2468, 3267
BseNI	ACTGG	2 cut(s)	1137, 2757
BseSI	GKGCMC	2 cut(s)	2296, 3231
BseXI	GCAGC	3 cut(s)	684, 1318, 1769
BseYI	CCCAGC	3 cut(s)	447, 1268, 3277
Bsh1236I	CGCG	4 cut(s)	380, 467, 1210, 1369
BshNI	GGYRCC	3 cut(s)	527, 2816, 2851
BshTI	ACCGGT	1 cut(s)	2045
BshVI	ATCGAT	1 cut(s)	473
BsiHKAI	GWGCWC	1 cut(s)	638
BsiHKCI	CYCGRG	1 cut(s)	3097
BsiSI	CCGG	9 cut(s)	201, 486, 517, 1614, 1795, 2046, 2745, 2801, 3098
BslFI	GGGAC	3 cut(s)	769, 2444, 3329
BslI	CCNNNNNNNGG	9 cut(s)	1453, 2048, 2095, 2467, 2698, 2792, 2848, 3103, 3134
BsmAI	GTCTC	3 cut(s)	328, 3069, 3197
BsmBI	CGTCTC	2 cut(s)	328, 3069
BsmFI	GGGAC	3 cut(s)	769, 2444, 3329
BsmI	GAATGC	1 cut(s)	1727
BsoBI	CYCGRG	1 cut(s)	3097
Bsp1286I	GDGCHC	3 cut(s)	638, 2296, 3231
Bsp19I	CCATGG	4 cut(s)	1603, 1942, 1969, 1996
Bsp68I	TCGCGA	1 cut(s)	467
BspCNI	CTCAG	7 cut(s)	853, 927, 1516, 2265, 2402, 2467, 3266
BspDI	ATCGAT	1 cut(s)	473
BspFNI	CGCG	4 cut(s)	380, 467, 1210, 1369
BspHI	TCATGA	6 cut(s)	1275, 1582, 1681, 1717, 1906, 1933
BspMAI	CTGCAG	1 cut(s)	2266
BspMI	ACCTGC	1 cut(s)	1667
BspPI	GGATC	8 cut(s)	535, 1100, 1113, 1605, 1618, 2189, 2449, 2468
BspQI	GCTCTTC	1 cut(s)	2548
BspT107I	GGYRCC	3 cut(s)	527, 2816, 2851
BsrBI	CCGCTC	1 cut(s)	282
BsrDI	GCAATG	2 cut(s)	1263, 2246
BsrFI	RCCGGY	2 cut(s)	1794, 2045
BsrI	ACTGG	2 cut(s)	1137, 2757
BssAI	RCCGGY	2 cut(s)	1794, 2045
BssNAI	GTATAC	1 cut(s)	1526
BssT1I	CCWWGG	6 cut(s)	665, 1603, 1942, 1969, 1996, 3164
Bst1107I	GTATAC	1 cut(s)	1526
Bst2UI	CCWGG	5 cut(s)	1448, 2720, 2918, 3186, 3291
Bst6I	CTCTTC	6 cut(s)	166, 233, 308, 773, 2548, 2841
BstC8I	GCNNGC	6 cut(s)	899, 1373, 1377, 1744, 2203, 2798
BstDEI	CTNAG	9 cut(s)	861, 935, 1503, 2064, 2131, 2252, 2389, 2454, 3253
BstDSI	CCRYGG	6 cut(s)	1402, 1603, 1942, 1969, 1996, 2991
BstENI	CCTNNNNNAGG	1 cut(s)	2696
BstF5I	GGATG	6 cut(s)	1163, 2186, 2524, 2981, 3139, 3223
BstFNI	CGCG	4 cut(s)	380, 467, 1210, 1369
BstH2I	RGCGCY	1 cut(s)	3000
BstHHI	GCGC	2 cut(s)	1371, 2999
BstMAI	GTCTC	3 cut(s)	328, 3069, 3197
BstNI	CCWGG	5 cut(s)	1448, 2720, 2918, 3186, 3291
BstNSI	RCATGY	5 cut(s)	1252, 1318, 2117, 2205, 2372
BstSCI	CCNGG	7 cut(s)	1446, 2718, 2916, 3096, 3097, 3184, 3289
BstSFI	CTRYAG	1 cut(s)	2262
BstSLI	GKGCMC	2 cut(s)	2296, 3231
BstUI	CGCG	4 cut(s)	380, 467, 1210, 1369
BstV1I	GCAGC	3 cut(s)	684, 1318, 1769
BstV2I	GAAGAC	1 cut(s)	484
BstX2I	RGATCY	3 cut(s)	1105, 1610, 2441
BstXI	CCANNNNNNTGG	3 cut(s)	646, 2015, 2018
BstYI	RGATCY	3 cut(s)	1105, 1610, 2441
BstZ17I	GTATAC	1 cut(s)	1526
Bsu15I	ATCGAT	1 cut(s)	473
Bsu36I	CCTNAGG	2 cut(s)	1503, 2131
BsuTUI	ATCGAT	1 cut(s)	473
BtgI	CCRYGG	6 cut(s)	1402, 1603, 1942, 1969, 1996, 2991
BtgZI	GCGATG	1 cut(s)	2060
BtsCI	GGATG	6 cut(s)	1163, 2186, 2524, 2981, 3139, 3223
BtsIMutI	CAGTG	3 cut(s)	912, 2750, 2772
BtuMI	TCGCGA	1 cut(s)	467
BveI	ACCTGC	1 cut(s)	1667
Cac8I	GCNNGC	6 cut(s)	899, 1373, 1377, 1744, 2203, 2798
CciI	TCATGA	6 cut(s)	1275, 1582, 1681, 1717, 1906, 1933
CfoI	GCGC	2 cut(s)	1371, 2999
Cfr10I	RCCGGY	2 cut(s)	1794, 2045
Cfr13I	GGNCC	5 cut(s)	1498, 2458, 3095, 3106, 3274
Cfr9I	CCCGGG	1 cut(s)	3097
ClaI	ATCGAT	1 cut(s)	473
CseI	GACGC	2 cut(s)	369, 3161
CsiI	ACCWGGT	2 cut(s)	2718, 3184
Csp6I	GTAC	7 cut(s)	520, 1011, 1084, 2173, 2403, 2635, 2862
CspAI	ACCGGT	1 cut(s)	2045
CspCI	CAANNNNNGTGG	2 cut(s)	2413, 2448
CviQI	GTAC	7 cut(s)	520, 1011, 1084, 2173, 2403, 2635, 2862
DdeI	CTNAG	9 cut(s)	861, 935, 1503, 2064, 2131, 2252, 2389, 2454, 3253
DraIII	CACNNNGTG	1 cut(s)	3188
DriI	GACNNNNNGTC	1 cut(s)	461
EaeI	YGGCCR	6 cut(s)	3, 689, 1399, 1945, 1972, 1999
Eam1104I	CTCTTC	6 cut(s)	166, 233, 308, 773, 2548, 2841
Eam1105I	GACNNNNNGTC	1 cut(s)	461
EarI	CTCTTC	6 cut(s)	166, 233, 308, 773, 2548, 2841
EciI	GGCGGA	2 cut(s)	175, 364
Ecl136II	GAGCTC	1 cut(s)	636
Eco130I	CCWWGG	6 cut(s)	665, 1603, 1942, 1969, 1996, 3164
Eco24I	GRGCYC	1 cut(s)	638
Eco32I	GATATC	2 cut(s)	1299, 2806
Eco47I	GGWCC	3 cut(s)	1498, 2458, 3106
Eco53kI	GAGCTC	1 cut(s)	636
Eco57I	CTGAAG	1 cut(s)	2220
Eco81I	CCTNAGG	2 cut(s)	1503, 2131
Eco88I	CYCGRG	1 cut(s)	3097
EcoICRI	GAGCTC	1 cut(s)	636
EcoNI	CCTNNNNNAGG	1 cut(s)	2696
EcoO109I	RGGNCCY	2 cut(s)	2458, 3106
EcoRI	GAATTC	4 cut(s)	1259, 2283, 2555, 3082
EcoRII	CCWGG	5 cut(s)	1446, 2718, 2916, 3184, 3289
EcoRV	GATATC	2 cut(s)	1299, 2806
EcoT14I	CCWWGG	6 cut(s)	665, 1603, 1942, 1969, 1996, 3164
EcoT38I	GRGCYC	1 cut(s)	638
ErhI	CCWWGG	6 cut(s)	665, 1603, 1942, 1969, 1996, 3164
Esp3I	CGTCTC	2 cut(s)	328, 3069
FaqI	GGGAC	3 cut(s)	769, 2444, 3329
FauI	CCCGC	2 cut(s)	110, 3095
FbaI	TGATCA	7 cut(s)	1233, 1810, 1855, 1891, 1918, 1990, 3067
FblI	GTMKAC	1 cut(s)	1525
FokI	GGATG	6 cut(s)	1150, 2193, 2511, 2968, 3146, 3230
FriOI	GRGCYC	1 cut(s)	638
FspBI	CTAG	8 cut(s)	545, 666, 1289, 1518, 1529, 2627, 3110, 3236
GlaI	GCGC	2 cut(s)	1370, 2998
GsaI	CCCAGC	3 cut(s)	451, 1272, 3281
GsuI	CTGGAG	1 cut(s)	3273
HaeII	RGCGCY	1 cut(s)	3000
HapII	CCGG	9 cut(s)	201, 486, 517, 1614, 1795, 2046, 2745, 2801, 3098
HgaI	GACGC	2 cut(s)	369, 3161
HhaI	GCGC	2 cut(s)	1371, 2999
Hin6I	GCGC	2 cut(s)	1369, 2997
HinP1I	GCGC	2 cut(s)	1369, 2997
HincII	GTYRAC	2 cut(s)	1515, 2434
HindII	GTYRAC	2 cut(s)	1515, 2434
HindIII	AAGCTT	1 cut(s)	1688
HpaII	CCGG	9 cut(s)	201, 486, 517, 1614, 1795, 2046, 2745, 2801, 3098
Hpy166II	GTNNAC	5 cut(s)	673, 1515, 1526, 2434, 2742
Hpy8I	GTNNAC	5 cut(s)	673, 1515, 1526, 2434, 2742
Hpy99I	CGWCG	5 cut(s)	467, 1150, 2678, 3133, 3155
HpyCH4IV	ACGT	3 cut(s)	1086, 3044, 3348
HpyF3I	CTNAG	9 cut(s)	861, 935, 1503, 2064, 2131, 2252, 2389, 2454, 3253
HpySE526I	ACGT	3 cut(s)	1086, 3044, 3348
HspAI	GCGC	2 cut(s)	1369, 2997
Ksp22I	TGATCA	7 cut(s)	1233, 1810, 1855, 1891, 1918, 1990, 3067
LguI	GCTCTTC	1 cut(s)	2548
LmnI	GCTCC	8 cut(s)	287, 633, 641, 1460, 1588, 2280, 2412, 3263
Lsp1109I	GCAGC	3 cut(s)	684, 1318, 1769
LweI	GCATC	5 cut(s)	1172, 1294, 1600, 2083, 2613
MabI	ACCWGGT	2 cut(s)	2718, 3184
MaeI	CTAG	8 cut(s)	545, 666, 1289, 1518, 1529, 2627, 3110, 3236
MaeII	ACGT	3 cut(s)	1086, 3044, 3348
MaeIII	GTNAC	7 cut(s)	997, 1047, 1310, 1952, 2639, 3208, 3295
MbiI	CCGCTC	1 cut(s)	282
MfeI	CAATTG	2 cut(s)	1341, 1539
MflI	RGATCY	3 cut(s)	1105, 1610, 2441
MhlI	GDGCHC	3 cut(s)	638, 2296, 3231
MlsI	TGGCCA	4 cut(s)	691, 1947, 1974, 2001
MluNI	TGGCCA	4 cut(s)	691, 1947, 1974, 2001
MlyI	GAGTC	3 cut(s)	450, 498, 1151
MmeI	TCCRAC	6 cut(s)	1083, 1128, 1438, 1642, 2122, 3111
Mox20I	TGGCCA	4 cut(s)	691, 1947, 1974, 2001
MscI	TGGCCA	4 cut(s)	691, 1947, 1974, 2001
MseI	TTAA	6 cut(s)	1392, 1466, 1571, 2165, 2169, 2322
Msp20I	TGGCCA	4 cut(s)	691, 1947, 1974, 2001
MspI	CCGG	9 cut(s)	201, 486, 517, 1614, 1795, 2046, 2745, 2801, 3098
MspR9I	CCNGG	7 cut(s)	1448, 2720, 2918, 3098, 3099, 3186, 3291
MunI	CAATTG	2 cut(s)	1341, 1539
Mva1269I	GAATGC	1 cut(s)	1727
MvaI	CCWGG	5 cut(s)	1448, 2720, 2918, 3186, 3291
MvnI	CGCG	4 cut(s)	380, 467, 1210, 1369
NciI	CCSGG	2 cut(s)	3098, 3099
NcoI	CCATGG	4 cut(s)	1603, 1942, 1969, 1996
NmeAIII	GCCGAG	1 cut(s)	574
NmuCI	GTSAC	6 cut(s)	997, 1047, 1310, 1952, 3208, 3295
NruI	TCGCGA	1 cut(s)	467
NspI	RCATGY	5 cut(s)	1252, 1318, 2117, 2205, 2372
OliI	CACNNNNGTG	1 cut(s)	2586
PacI	TTAATTAA	1 cut(s)	2169
PaeI	GCATGC	1 cut(s)	2205
PagI	TCATGA	6 cut(s)	1275, 1582, 1681, 1717, 1906, 1933
PciI	ACATGT	2 cut(s)	1248, 1314
PciSI	GCTCTTC	1 cut(s)	2548
PctI	GAATGC	1 cut(s)	1727
PfeI	GAWTC	8 cut(s)	475, 628, 1151, 1478, 1697, 1733, 3141, 3330
PflMI	CCANNNNNTGG	2 cut(s)	2048, 2095
PfoI	TCCNGGA	1 cut(s)	3289
PinAI	ACCGGT	1 cut(s)	2045
PleI	GAGTC	3 cut(s)	450, 497, 1150
PpsI	GAGTC	3 cut(s)	450, 497, 1150
PpuMI	RGGWCCY	2 cut(s)	2458, 3106
PscI	ACATGT	2 cut(s)	1248, 1314
PshBI	ATTAAT	1 cut(s)	1466
Psp124BI	GAGCTC	1 cut(s)	638
Psp5II	RGGWCCY	2 cut(s)	2458, 3106
Psp6I	CCWGG	5 cut(s)	1446, 2718, 2916, 3184, 3289
PspFI	CCCAGC	3 cut(s)	447, 1268, 3277
PspGI	CCWGG	5 cut(s)	1446, 2718, 2916, 3184, 3289
PspPI	GGNCC	5 cut(s)	1498, 2458, 3095, 3106, 3274
PspPPI	RGGWCCY	2 cut(s)	2458, 3106
PstI	CTGCAG	1 cut(s)	2266
PsuI	RGATCY	3 cut(s)	1105, 1610, 2441
RruI	TCGCGA	1 cut(s)	467
RsaI	GTAC	7 cut(s)	521, 1012, 1085, 2174, 2404, 2636, 2863
RsaNI	GTAC	7 cut(s)	520, 1011, 1084, 2173, 2403, 2635, 2862
SacI	GAGCTC	1 cut(s)	638
SapI	GCTCTTC	1 cut(s)	2548
SaqAI	TTAA	6 cut(s)	1392, 1466, 1571, 2165, 2169, 2322
Sau96I	GGNCC	5 cut(s)	1498, 2458, 3095, 3106, 3274
SchI	GAGTC	3 cut(s)	450, 498, 1151
ScrFI	CCNGG	7 cut(s)	1448, 2720, 2918, 3098, 3099, 3186, 3291
SduI	GDGCHC	3 cut(s)	638, 2296, 3231
SexAI	ACCWGGT	2 cut(s)	2718, 3184
SfaNI	GCATC	5 cut(s)	1172, 1294, 1600, 2083, 2613
SfcI	CTRYAG	1 cut(s)	2262
SinI	GGWCC	3 cut(s)	1498, 2458, 3106
SmaI	CCCGGG	1 cut(s)	3099
SmlI	CTYRAG	5 cut(s)	1484, 1691, 2478, 2570, 2735
SmoI	CTYRAG	5 cut(s)	1484, 1691, 2478, 2570, 2735
SpeI	ACTAGT	1 cut(s)	1528
SphI	GCATGC	1 cut(s)	2205
SrfI	GCCCGGGC	1 cut(s)	3099
SspI	AATATT	1 cut(s)	2106
SspMI	CTAG	8 cut(s)	545, 666, 1289, 1518, 1529, 2627, 3110, 3236
SstI	GAGCTC	1 cut(s)	638
StyD4I	CCNGG	7 cut(s)	1446, 2718, 2916, 3096, 3097, 3184, 3289
StyI	CCWWGG	6 cut(s)	665, 1603, 1942, 1969, 1996, 3164
TaiI	ACGT	3 cut(s)	1089, 3047, 3351
TaqI	TCGA	3 cut(s)	473, 2207, 2771
TatI	WGTACW	3 cut(s)	1010, 2172, 2861
TauI	GCSGC	9 cut(s)	191, 194, 197, 200, 380, 528, 536, 572, 615
TfiI	GAWTC	8 cut(s)	475, 628, 1151, 1478, 1697, 1733, 3141, 3330
Tru1I	TTAA	6 cut(s)	1392, 1466, 1571, 2165, 2169, 2322
Tru9I	TTAA	6 cut(s)	1392, 1466, 1571, 2165, 2169, 2322
TscAI	CASTG	3 cut(s)	919, 2757, 2772
TseFI	GTSAC	6 cut(s)	997, 1047, 1310, 1952, 3208, 3295
TseI	GCWGC	3 cut(s)	697, 1331, 1782
Tsp45I	GTSAC	6 cut(s)	997, 1047, 1310, 1952, 3208, 3295
TspGWI	ACGGA	2 cut(s)	693, 1156
TspMI	CCCGGG	1 cut(s)	3097
TspRI	CASTG	3 cut(s)	919, 2757, 2772
Van91I	CCANNNNNTGG	2 cut(s)	2048, 2095
VpaK11BI	GGWCC	3 cut(s)	1498, 2458, 3106
VspI	ATTAAT	1 cut(s)	1466
XagI	CCTNNNNNAGG	1 cut(s)	2696
XapI	RAATTY	5 cut(s)	684, 1259, 2283, 2555, 3082
XceI	RCATGY	5 cut(s)	1252, 1318, 2117, 2205, 2372
XcmI	CCANNNNNNNNNTGG	4 cut(s)	889, 1763, 2015, 2749
XmaI	CCCGGG	1 cut(s)	3097
XmaJI	CCTAGG	1 cut(s)	665
XmiI	GTMKAC	1 cut(s)	1525
XspI	CTAG	8 cut(s)	545, 666, 1289, 1518, 1529, 2627, 3110, 3236

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.